Carg19125 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19125
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pyrroline-5-carboxylate reductase
Location	Carg_Chr11: 12474548 .. 12475051 (-)
RNA-Seq Expression	Carg19125
Synteny	Carg19125

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACAATAAGGAAGAAGACCCAGAAACAATCGCTCCTCAATGGTACTCTTTGATTATGAGAGTGATGAGCAAAAGAAGAACATGGGTATGTCTTTTTGTTCTGGTTTATGCCCTTCTTTTGTCTTCTTCCTGGAATTTCCTTGCTTCTATACTCTCTTGGTACAAATCCCAAGTGGAAGTTTCTTCTTCTTCTTCCTCTTCTTTTGGGTGGCCTGCGATTTATGCTTCTCTGCTTCTTGGGGCAGTTTTTGGGGTTCTTTCCATGGTGGCTGCACTGGCTGTCATGGTGCCGGCCACCCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCTAAGAGGGCGTTGGTGGTGGAGGGGAGGAAGATTACTAAGGAGATTTTTGGGGTTGTGGCTAAGATTTTGTTGAAGGAAGGGAATTTAGTGGCTGCTGTTTGTGCTGTTTTGGGGTACTTTGCTTTGTTTAGGAAGAGTAATGAGAGTTAG

mRNA sequence

ATGGCAGACAATAAGGAAGAAGACCCAGAAACAATCGCTCCTCAATGGTACTCTTTGATTATGAGAGTGATGAGCAAAAGAAGAACATGGGTATGTCTTTTTGTTCTGGTTTATGCCCTTCTTTTGTCTTCTTCCTGGAATTTCCTTGCTTCTATACTCTCTTGGTACAAATCCCAAGTGGAAGTTTCTTCTTCTTCTTCCTCTTCTTTTGGGTGGCCTGCGATTTATGCTTCTCTGCTTCTTGGGGCAGTTTTTGGGGTTCTTTCCATGGTGGCTGCACTGGCTGTCATGGTGCCGGCCACCCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCTAAGAGGGCGTTGGTGGTGGAGGGGAGGAAGATTACTAAGGAGATTTTTGGGGTTGTGGCTAAGATTTTGTTGAAGGAAGGGAATTTAGTGGCTGCTGTTTGTGCTGTTTTGGGGTACTTTGCTTTGTTTAGGAAGAGTAATGAGAGTTAG

Coding sequence (CDS)

ATGGCAGACAATAAGGAAGAAGACCCAGAAACAATCGCTCCTCAATGGTACTCTTTGATTATGAGAGTGATGAGCAAAAGAAGAACATGGGTATGTCTTTTTGTTCTGGTTTATGCCCTTCTTTTGTCTTCTTCCTGGAATTTCCTTGCTTCTATACTCTCTTGGTACAAATCCCAAGTGGAAGTTTCTTCTTCTTCTTCCTCTTCTTTTGGGTGGCCTGCGATTTATGCTTCTCTGCTTCTTGGGGCAGTTTTTGGGGTTCTTTCCATGGTGGCTGCACTGGCTGTCATGGTGCCGGCCACCCTTGTCACTTGGATCACCATTGTTGTGCTGCTTTACTTCTTTGGGAAGCCTAAGAGGGCGTTGGTGGTGGAGGGGAGGAAGATTACTAAGGAGATTTTTGGGGTTGTGGCTAAGATTTTGTTGAAGGAAGGGAATTTAGTGGCTGCTGTTTGTGCTGTTTTGGGGTACTTTGCTTTGTTTAGGAAGAGTAATGAGAGTTAG

Protein sequence

MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQVEVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES

Homology

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BLAST of Carg19125 vs. NCBI nr
Match: KAG7022922.1 (hypothetical protein SDJN02_16658, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 311.2 bits (796), Expect = 5.3e-81
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120
           EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR
Sbjct: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120

Query: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES
Sbjct: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 167

[Close]

BLAST of Carg19125 vs. NCBI nr
Match: XP_023531926.1 (uncharacterized protein LOC111794046 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309.7 bits (792), Expect = 1.5e-80
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFL SILSWYKSQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSWYKSQV 60

Query: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120
           EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR
Sbjct: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120

Query: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES
Sbjct: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 167

[Close]

BLAST of Carg19125 vs. NCBI nr
Match: KAG6589222.1 (hypothetical protein SDJN03_17787, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 309.7 bits (792), Expect = 1.5e-80
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120
           EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR
Sbjct: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120

Query: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNE 167
           ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNE
Sbjct: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNE 166

[Close]

BLAST of Carg19125 vs. NCBI nr
Match: XP_022988973.1 (uncharacterized protein LOC111486173 [Cucurbita maxima])

HSP 1 Score: 306.6 bits (784), Expect = 1.3e-79
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  EV-SSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPK 120
           EV SSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPK
Sbjct: 61  EVSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPK 120

Query: 121 RALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           RALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES
Sbjct: 121 RALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168

[Close]

BLAST of Carg19125 vs. NCBI nr
Match: XP_022930709.1 (uncharacterized protein LOC111437107 isoform X1 [Cucurbita moschata])

HSP 1 Score: 305.4 bits (781), Expect = 2.9e-79
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120
           EV SSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR
Sbjct: 61  EV-SSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120

Query: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES
Sbjct: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 166

[Close]

BLAST of Carg19125 vs. ExPASy TrEMBL
Match: A0A6J1JNW4 (uncharacterized protein LOC111486173 OS=Cucurbita maxima OX=3661 GN=LOC111486173 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.3e-80
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  EV-SSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPK 120
           EV SSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPK
Sbjct: 61  EVSSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPK 120

Query: 121 RALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           RALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES
Sbjct: 121 RALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168

[Close]

BLAST of Carg19125 vs. ExPASy TrEMBL
Match: A0A6J1ES94 (uncharacterized protein LOC111437107 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437107 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.4e-79
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV
Sbjct: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60

Query: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120
           EV SSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR
Sbjct: 61  EV-SSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120

Query: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES
Sbjct: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 166

[Close]

BLAST of Carg19125 vs. ExPASy TrEMBL
Match: A0A6J1D2X1 (uncharacterized protein LOC111016811 OS=Momordica charantia OX=3673 GN=LOC111016811 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.2e-70
Identity = 148/167 (88.62%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MADNKEEDPET  P +YSL MRVMSKRRTWVCLFVLVYAL+LSSSWNFLASILSWYKSQV
Sbjct: 1   MADNKEEDPETAPPPFYSLFMRVMSKRRTWVCLFVLVYALILSSSWNFLASILSWYKSQV 60

Query: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120
            V   SS+SFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKP+R
Sbjct: 61  GV---SSASFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPRR 120

Query: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           ALVVEGRKIT+EIFGVV +ILLKEGN+VAAVCA+LGYFALFRK+N+S
Sbjct: 121 ALVVEGRKITREIFGVVLRILLKEGNVVAAVCALLGYFALFRKTNDS 164

[Close]

BLAST of Carg19125 vs. ExPASy TrEMBL
Match: A0A5A7SLG9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003370 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 7.8e-70
Identity = 151/172 (87.79%), Postives = 156/172 (90.70%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQW-----YSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSW 60
           MADNKEEDPET  PQ      YSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFL SILSW
Sbjct: 1   MADNKEEDPETAPPQQAIPKSYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YKSQVEVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFF 120
           YKSQVE   +SSSSFGWPAIYASLLLG VFGV+SMVAALAVM+PATLVTWI IVVLLYFF
Sbjct: 61  YKSQVE---ASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFF 120

Query: 121 GKPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           GKP+R LVVEGRKITKEIFGVV KILLKEGNLVAAVCAVLGYFALFRK+NES
Sbjct: 121 GKPRRLLVVEGRKITKEIFGVVIKILLKEGNLVAAVCAVLGYFALFRKTNES 169

[Close]

BLAST of Carg19125 vs. ExPASy TrEMBL
Match: A0A1S3C0S4 (uncharacterized protein LOC103495508 OS=Cucumis melo OX=3656 GN=LOC103495508 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 7.8e-70
Identity = 151/172 (87.79%), Postives = 156/172 (90.70%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQW-----YSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSW 60
           MADNKEEDPET  PQ      YSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFL SILSW
Sbjct: 1   MADNKEEDPETAPPQQAIPKSYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLVSILSW 60

Query: 61  YKSQVEVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFF 120
           YKSQVE   +SSSSFGWPAIYASLLLG VFGV+SMVAALAVM+PATLVTWI IVVLLYFF
Sbjct: 61  YKSQVE---ASSSSFGWPAIYASLLLGGVFGVISMVAALAVMIPATLVTWIAIVVLLYFF 120

Query: 121 GKPKRALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           GKP+R LVVEGRKITKEIFGVV KILLKEGNLVAAVCAVLGYFALFRK+NES
Sbjct: 121 GKPRRLLVVEGRKITKEIFGVVIKILLKEGNLVAAVCAVLGYFALFRKTNES 169

[Close]

BLAST of Carg19125 vs. TAIR 10
Match: AT1G03730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03600.1); Has 50 Blast hits to 50 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 190.3 bits (482), Expect = 1.3e-48
Identity = 104/154 (67.53%), Postives = 123/154 (79.87%), Query Frame = 0


Query: 14  PQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQVEVSSSSSSSFGWP 73
           P+ Y + MR+MSKRRTWVCLFV VYA+LL+SSWNFL S+LSWYK Q    +SS S    P
Sbjct: 16  PRSYLIFMRIMSKRRTWVCLFVAVYAILLASSWNFLTSVLSWYKLQY---TSSPSPSRLP 75

Query: 74  AIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKRALVVEGRKITKEI 133
           A+YAS++LGAVFG +SMVAA AV VPA +V WI++VVLL FFGK +R LVVE RKIT+E+
Sbjct: 76  AVYASVVLGAVFGAMSMVAAAAVAVPAVMVIWISVVVLLAFFGKSRRVLVVEARKITREV 135

Query: 134 FGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           FG V K+LLKEGN VAAVCAVLGYF L RK  +S
Sbjct: 136 FGFVFKVLLKEGNAVAAVCAVLGYFILIRKDFDS 166

[Close]

BLAST of Carg19125 vs. TAIR 10
Match: AT4G03600.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 181.8 bits (460), Expect = 4.5e-46
Identity = 95/158 (60.13%), Postives = 123/158 (77.85%), Query Frame = 0


Query: 10  ETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQVEVSSSSSSS 69
           +T +P+ Y + + +MSKRRTWVCLF+ VYA+L+SSSWN L S+L+WYK Q   S+S  S 
Sbjct: 4   QTESPRSYHIFITIMSKRRTWVCLFIAVYAILVSSSWNLLRSVLNWYKLQYTSSNSDYSP 63

Query: 70  FGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKRALVVEGRKI 129
              PA+YAS++LGA+FG +SMVAA+ V VPA +V WI++VVLL FFGK +R LVVEGRKI
Sbjct: 64  SRLPAVYASVVLGAMFGAMSMVAAMTVAVPAVMVIWISVVVLLAFFGKSRRVLVVEGRKI 123

Query: 130 TKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
           T+E+ G V K+LLKEGN+VAA CAVL YF L R+  +S
Sbjct: 124 TREVVGFVFKVLLKEGNVVAAFCAVLAYFLLIRRDFDS 161

[Close]

BLAST of Carg19125 vs. TAIR 10
Match: AT4G28330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28340.1); Has 48 Blast hits to 48 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 167.5 bits (423), Expect = 8.8e-42
Identity = 95/167 (56.89%), Postives = 122/167 (73.05%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MAD  +E+PET+    Y L +RV+SKRRTW CLF++VYA+LLSSSWN L SI++WY    
Sbjct: 1   MAD--KEEPETMTS--YKLFLRVISKRRTWACLFLVVYAILLSSSWNSLNSIVNWYGENH 60

Query: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120
           + SS      G PAIYAS+LLGAVFGVLSM AAL + VPA +V WI++VV + F GK ++
Sbjct: 61  QTSS------GLPAIYASVLLGAVFGVLSMAAALFIAVPAIVVIWISVVVTMAFAGKSRK 120

Query: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALFRKSNES 168
            +V+EGRK+TKEI G V ++LLKEGN VA +CA+L YF  F   + S
Sbjct: 121 RVVIEGRKVTKEIAGFVFRVLLKEGNFVALLCALLAYFVFFNSYSSS 157

[Close]

BLAST of Carg19125 vs. TAIR 10
Match: AT4G28340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28330.1); Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 157.1 bits (396), Expect = 1.2e-38
Identity = 92/161 (57.14%), Postives = 117/161 (72.67%), Query Frame = 0


Query: 1   MADNKEEDPETIAPQWYSLIMRVMSKRRTWVCLFVLVYALLLSSSWNFLASILSWYKSQV 60
           MAD +E++  T     Y L +RV+SKRRTWVCLF++VYA+LLSSS N L SI++WY    
Sbjct: 1   MADKEEQETMTS----YKLFLRVISKRRTWVCLFLVVYAVLLSSSRNSLNSIVNWYGENH 60

Query: 61  EVSSSSSSSFGWPAIYASLLLGAVFGVLSMVAALAVMVPATLVTWITIVVLLYFFGKPKR 120
           + SS      G PAIYAS+LLGAVFGVLSM AAL + VPA +V WI++VV + F  K ++
Sbjct: 61  QTSS------GLPAIYASVLLGAVFGVLSMAAALFIAVPAIVVIWISVVVTIAFPVKSRK 120

Query: 121 ALVVEGRKITKEIFGVVAKILLKEGNLVAAVCAVLGYFALF 162
            +V+EGRK+TKEI G V K+LLKEGN VA +CAV+ YF  F
Sbjct: 121 KVVIEGRKVTKEIAGYVFKVLLKEGNFVALLCAVIAYFVFF 151

The following BLAST results are available for this feature:

BLAST of Carg19125 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022922.1	5.3e-81	100.00	hypothetical protein SDJN02_16658, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023531926.1	1.5e-80	99.40	uncharacterized protein LOC111794046 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6589222.1	1.5e-80	100.00	hypothetical protein SDJN03_17787, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022988973.1	1.3e-79	99.40	uncharacterized protein LOC111486173 [Cucurbita maxima]	[more]
XP_022930709.1	2.9e-79	99.40	uncharacterized protein LOC111437107 isoform X1 [Cucurbita moschata]	[more]

BLAST of Carg19125 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg19125 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JNW4	6.3e-80	99.40	uncharacterized protein LOC111486173 OS=Cucurbita maxima OX=3661 GN=LOC111486173...	[more]
A0A6J1ES94	1.4e-79	99.40	uncharacterized protein LOC111437107 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1D2X1	1.2e-70	88.62	uncharacterized protein LOC111016811 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A5A7SLG9	7.8e-70	87.79	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C0S4	7.8e-70	87.79	uncharacterized protein LOC103495508 OS=Cucumis melo OX=3656 GN=LOC103495508 PE=...	[more]

BLAST of Carg19125 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03730.1	1.3e-48	67.53	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G03600.1	4.5e-46	60.13	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G28330.1	8.8e-42	56.89	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G28340.1	1.2e-38	57.14	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34656	PYRROLINE-5-CARBOXYLATE REDUCTASE	coord: 6..166
None	No IPR available	PANTHER	PTHR34656:SF1	PYRROLINE-5-CARBOXYLATE REDUCTASE	coord: 6..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19125-RA	Carg19125-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane