Carg19120 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19120
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	GPI-anchored protein LORELEI-like
Location	Carg_Chr11: 12444052 .. 12446815 (+)
RNA-Seq Expression	Carg19120
Synteny	Carg19120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCGACTAGTTGAGGTATGCTCATGATGTCATGCAAGTTTTTTCTCATTCTCGACCTTATTTGGAGCATATATGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCATTTTAAAGCTTTGAGGGGAAGCTCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGCGTTACAAATGGTATCAGAGCCAGGTTTCGGACGTTGTGTCAGCCTTCTCGCTCTTCTCCGAAGAGCGGTATGCCAGTAAGGATGCTGGGCCCTAAAAGGGGTGAATTTGGGGGCGGTCCCACATCGAAGGACATTGGGTCCTAAAGGGAGTGGATTTGGGGGTATCAGAGCCAGGTTCCAAATGATATGCAAGCCTTCTCGCTGTTCCCCGAAGGGGTAGACACAAGGGTTGGCGGTCCCACATCGAAGGACATTGGGTCCTAAAGGGAGTGGATTTGGGGGTATCAGAGCCAGGTTCCAAATGATATGCAAGCCTTCTCGCTGTTCCCCGAAGGGGTAGACACAAGGGTTGTGTGCCAGTAAGGACGCTAGGCCCTAAAGGGGGTGGATTTGGGGGCGGTCCCACATCGATTGGAGGAAGGAAAGAGTGCCAGCGAAGACGTTGGGCCCGAAGGGGGGTGGATTGTGATGTCCACATTGGTTGATGAGGAGAACAAACCACCATTTATAAGATGTGTTTTAAAGCTTTGAGAGGAAGCCCGAAAGAGAAAACCCAAAGAAAACAATACGGAACAGATCAGTGGATCTGAGGCGTTACAATATCCTTATAGAACATCTGGAGCATATGGATAAAAACAAACATATCAACAAAAGCTAAAACAATAGAGACCAAAATGGAACACGTGGCGGACACAACCATTAACCTAACAAAACTACATGGATACAAAAAGTTAGGGGTGGTCGGTGGCAATAAGAGGAGAAGGCAATGGACTCAACTCATTTCATGCAAATTTTCACTCTCCTCCCTACAAATTCCTCTCCTTTTCCCAACAAAATGAATCCCAAAACACCCTTTTACCAAAAACACACAAAAACAAGAATTGCTTGATTCACAGCCATCTGCAGGCGGAGATAAAAAGCTCCACCGCCATCGCCGCCGCAGCTGCTCGACGGACAATCCAAAAAGTTGCAGAGCCATGGCGTCGAGTCAAAGTTGCCTTTATTTTGTCCTTTTCTGTCTCTTCATTTCCCTCACTTACTCCAACGTCCTCTCTTGTAATTTCTTCTCTCTCTCTCTCTCTCTCTTTTATTTTCATTTATTTTCCTTTTAGGGTTTTGATTTGTTTGTATTTGCAGATGAGGCCCTCAAAGCTGGTAAACCAACTGGACGTTCCCTTCTTCAAGCCCAAAAAGGTAACCCCTTTTACCGGTTTCGCGTGTTTCGTGTTCCAGTTCGATCTATTCTACCGAACATGAACACGAACACGAACCCAAGTTATAAATTTGATACCTTTTAGACTACCCATTAAGCGAAAACAATTATTCCGGACAACGAACCATGATAAGCATCAACTCTCTGTTTTGTCTTGTTTAAGCATAAATTTTTCGTGTTCCATTTGATCTGACTTTAAGTTATAAATTTGATACATTTTGAACTACCCATTAAGTAGAGACAACTATTTGGGACAACAACTCTAGTTTGTTTATTCTCGATCTGACACGTTAGTAAAGTTATAAATTTGATACGTTTTGAACTACCCATTAAGTGGAGAATAGACCTCGGTCTACAATAATATGATACTTTGAGCATAAACTTTTCGTGTGGTGGTTGGATCTGAGGTTAAGGTTAAGTTATAAATTTGATATCTTTTAAACTACCCATTAAGCGGAGACGATTGTTCAGGACAACGGACCTCTGTCCACGTTAATATGATACTATCTAATTTGAGTATAAACTCTCGTTTGTTTTGTCTAATTTGAGCATAAACTTTTTCGTGTTCTGGTTGGATCTGAGGTTGAGGTTAAAGTTAAGTTATAAATTCGATATTTTTTAAACTACCCATTAAGTGGAGACGATTTTTTAGGACAACGAAATATGATACCATCTAATTGAAGCATAAATTCTCGTTTGTTTTGTGTAATTCGTTAGGACGTTAAGGTTAAGTTATAAATTTGATACATTTTGAATTACCCATTGTTCGGGACAATGGAGATAATATGATATTGTCTAATTTGAGTATAAACTGTGGTTTGTTTTGTGTCGGGATTCGACAGAATGCACGGTGGACATGGAAGCGCAAAATTACACGATCTTGACAAGCCAATGCAAAGGGCCAAAGTACCCACCGAAGGTGTGCTGCCACGCATTGTTGGAGTTCTGCTGCAGCTTTGTGGAAGAATTGAACGACCGGACCAACAACTGTGCCACCACAATGTTCAGTTACATTAACCTCTACGGCCAATACCCACCTGGCCTCTTTGCCAATCAATGCAAGGGAGGAGAACAAGGCCTGGAGTGTAACAAATCCCTCCTTTCTCAAAGGTGGGAGTGGCCACATCAGTTTATCTTCGGCTCGTTCGCTCCGTCAAACTCGGTCTCGACTCTACTCTCTCACTCTCGCTCTCGCTCTCGTATTTATGCTCCATGTATTGCTTTAGAACACGAAAGGGGAACGGAAAGTTCTTTATTTTACGTTCCCCGTTTCGTTGTCTTTCTTTATACGACGAAAGTTTTGAATCTTTCTGTGTTTGTTTGA

mRNA sequence

ATGAATCGACTAGTTGAGACGCATTTTAAAGCTTTGAGGGGAAGCTCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGCGTTACAAATGGTATCAGAGCCAGGTTTCGGACGTTGTGTCAGCCTTCTCGCTCTTCTCCGAAGAGCGGTATGCCAAGCCAGGTTCCAAATGATATGCAAGCCTTCTCGCTGTTCCCCGAAGGGGTAGACACAAGGGTTGGCGGTCCCACATCGAAGGACATTGGGGGTAGACACAAGGGTTGTGTGCCAGTAAGGACGCTAGGCCCTAAAGGGGGTGGATTTGGGGGCGGTCCCACATCGATTGGAGGAAGGAAAGAGTGCCAGCGAAGACGTTGGGCCCGAAGGGGGGCGGAGATAAAAAGCTCCACCGCCATCGCCGCCGCAGCTGCTCGACGGACAATCCAAAAAGTTGCAGAGCCATGGCGTCGAGTCAAAGGTTTTGATTTGTTTGTATTTGCAGATGAGGCCCTCAAAGCTGGTAAACCAACTGGACGTTCCCTTCTTCAAGCCCAAAAAGAATGCACGGTGGACATGGAAGCGCAAAATTACACGATCTTGACAAGCCAATGCAAAGGGCCAAAGTACCCACCGAAGGTGTGCTGCCACGCATTGTTGGAGTTCTGCTGCAGCTTTGTGGAAGAATTGAACGACCGGACCAACAACTGTGCCACCACAATGTTCAGTTACATTAACCTCTACGGCCAATACCCACCTGGCCTCTTTGCCAATCAATGCAAGGGAGGAGAACAAGGCCTGGAGTGTAACAAATCCCTCCTTTCTCAAAGGTGGGAGTGGCCACATCAGTTTATCTTCGGCTCGTTCGCTCCGTCAAACTCGGTCTCGACTCTACTCTCTCACTCTCGCTCTCGCTCTCGTATTTATGCTCCATGTATTGCTTTAGAACACGAAAGGGGAACGGAAAGTTCTTTATTTTACGTTCCCCGTTTCGTTGTCTTTCTTTATACGACGAAAGTTTTGAATCTTTCTGTGTTTGTTTGA

Coding sequence (CDS)

ATGAATCGACTAGTTGAGACGCATTTTAAAGCTTTGAGGGGAAGCTCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGCGTTACAAATGGTATCAGAGCCAGGTTTCGGACGTTGTGTCAGCCTTCTCGCTCTTCTCCGAAGAGCGGTATGCCAAGCCAGGTTCCAAATGATATGCAAGCCTTCTCGCTGTTCCCCGAAGGGGTAGACACAAGGGTTGGCGGTCCCACATCGAAGGACATTGGGGGTAGACACAAGGGTTGTGTGCCAGTAAGGACGCTAGGCCCTAAAGGGGGTGGATTTGGGGGCGGTCCCACATCGATTGGAGGAAGGAAAGAGTGCCAGCGAAGACGTTGGGCCCGAAGGGGGGCGGAGATAAAAAGCTCCACCGCCATCGCCGCCGCAGCTGCTCGACGGACAATCCAAAAAGTTGCAGAGCCATGGCGTCGAGTCAAAGGTTTTGATTTGTTTGTATTTGCAGATGAGGCCCTCAAAGCTGGTAAACCAACTGGACGTTCCCTTCTTCAAGCCCAAAAAGAATGCACGGTGGACATGGAAGCGCAAAATTACACGATCTTGACAAGCCAATGCAAAGGGCCAAAGTACCCACCGAAGGTGTGCTGCCACGCATTGTTGGAGTTCTGCTGCAGCTTTGTGGAAGAATTGAACGACCGGACCAACAACTGTGCCACCACAATGTTCAGTTACATTAACCTCTACGGCCAATACCCACCTGGCCTCTTTGCCAATCAATGCAAGGGAGGAGAACAAGGCCTGGAGTGTAACAAATCCCTCCTTTCTCAAAGGTGGGAGTGGCCACATCAGTTTATCTTCGGCTCGTTCGCTCCGTCAAACTCGGTCTCGACTCTACTCTCTCACTCTCGCTCTCGCTCTCGTATTTATGCTCCATGTATTGCTTTAGAACACGAAAGGGGAACGGAAAGTTCTTTATTTTACGTTCCCCGTTTCGTTGTCTTTCTTTATACGACGAAAGTTTTGAATCTTTCTGTGTTTGTTTGA

Protein sequence

MNRLVETHFKALRGSSKGKAQRGQYLLAVDLGVTNGIRARFRTLCQPSRSSPKSGMPSQVPNDMQAFSLFPEGVDTRVGGPTSKDIGGRHKGCVPVRTLGPKGGGFGGGPTSIGGRKECQRRRWARRGAEIKSSTAIAAAAARRTIQKVAEPWRRVKGFDLFVFADEALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEELNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECNKSLLSQRWEWPHQFIFGSFAPSNSVSTLLSHSRSRSRIYAPCIALEHERGTESSLFYVPRFVVFLYTTKVLNLSVFV

Homology

[Close]

BLAST of Carg19120 vs. NCBI nr
Match: KAG7022917.1 (GPI-anchored protein LLG1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 704.1 bits (1816), Expect = 5.8e-199
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0


Query: 1   MNRLVETHFKALRGSSKGKAQRGQYLLAVDLGVTNGIRARFRTLCQPSRSSPKSGMPSQV 60
           MNRLVETHFKALRGSSKGKAQRGQYLLAVDLGVTNGIRARFRTLCQPSRSSPKSGMPSQV
Sbjct: 1   MNRLVETHFKALRGSSKGKAQRGQYLLAVDLGVTNGIRARFRTLCQPSRSSPKSGMPSQV 60

Query: 61  PNDMQAFSLFPEGVDTRVGGPTSKDIGGRHKGCVPVRTLGPKGGGFGGGPTSIGGRKECQ 120
           PNDMQAFSLFPEGVDTRVGGPTSKDIGGRHKGCVPVRTLGPKGGGFGGGPTSIGGRKECQ
Sbjct: 61  PNDMQAFSLFPEGVDTRVGGPTSKDIGGRHKGCVPVRTLGPKGGGFGGGPTSIGGRKECQ 120

Query: 121 RRRWARRGAEIKSSTAIAAAAARRTIQKVAEPWRRVKGFDLFVFADEALKAGKPTGRSLL 180
           RRRWARRGAEIKSSTAIAAAAARRTIQKVAEPWRRVKGFDLFVFADEALKAGKPTGRSLL
Sbjct: 121 RRRWARRGAEIKSSTAIAAAAARRTIQKVAEPWRRVKGFDLFVFADEALKAGKPTGRSLL 180

Query: 181 QAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEELNDRTNNCATTMFS 240
           QAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEELNDRTNNCATTMFS
Sbjct: 181 QAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEELNDRTNNCATTMFS 240

Query: 241 YINLYGQYPPGLFANQCKGGEQGLECNKSLLSQRWEWPHQFIFGSFAPSNSVSTLLSHSR 300
           YINLYGQYPPGLFANQCKGGEQGLECNKSLLSQRWEWPHQFIFGSFAPSNSVSTLLSHSR
Sbjct: 241 YINLYGQYPPGLFANQCKGGEQGLECNKSLLSQRWEWPHQFIFGSFAPSNSVSTLLSHSR 300

Query: 301 SRSRIYAPCIALEHERGTESSLFYVPRFVVFLYTTKVLNLSVFV 345
           SRSRIYAPCIALEHERGTESSLFYVPRFVVFLYTTKVLNLSVFV
Sbjct: 301 SRSRIYAPCIALEHERGTESSLFYVPRFVVFLYTTKVLNLSVFV 344

[Close]

BLAST of Carg19120 vs. NCBI nr
Match: KAG6589217.1 (GPI-anchored protein LLG3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 237.7 bits (605), Expect = 1.5e-58
Identity = 117/150 (78.00%), Postives = 127/150 (84.67%), Query Frame = 0


Query: 163 VFADEALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCS 222
           V + EALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCS
Sbjct: 24  VLSYEALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCS 83

Query: 223 FVEELNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECNKSLLSQRWEWPHQFI 282
           FVEELNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECNKSLLSQ         
Sbjct: 84  FVEELNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECNKSLLSQ--------- 143

Query: 283 FGSFAPSNSVSTLLSHSRSRSRIYAPCIAL 313
             + +   S+S+  S  ++RSR+Y+  +AL
Sbjct: 144 --NGSGHISLSSARSLRQTRSRLYSLTLAL 162

[Close]

BLAST of Carg19120 vs. NCBI nr
Match: XP_022930832.1 (GPI-anchored protein LLG2-like [Cucurbita moschata])

HSP 1 Score: 236.1 bits (601), Expect = 4.5e-58
Identity = 116/146 (79.45%), Postives = 124/146 (84.93%), Query Frame = 0


Query: 167 EALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEE 226
           EALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEE
Sbjct: 28  EALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEE 87

Query: 227 LNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECNKSLLSQRWEWPHQFIFGSF 286
           LNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECNKSLLSQ             
Sbjct: 88  LNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECNKSLLSQ-----------GG 147

Query: 287 APSNSVSTLLSHSRSRSRIYAPCIAL 313
           +   S+S+  S  ++RSR+Y+  +AL
Sbjct: 148 SGHISLSSARSLRQTRSRLYSLTLAL 162

[Close]

BLAST of Carg19120 vs. NCBI nr
Match: XP_022988974.1 (GPI-anchored protein LLG2-like [Cucurbita maxima])

HSP 1 Score: 227.6 bits (579), Expect = 1.6e-55
Identity = 111/145 (76.55%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 163 VFADEALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCS 222
           V + EALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYP K+CCHALLEFCCS
Sbjct: 24  VLSYEALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPAKLCCHALLEFCCS 83

Query: 223 FVEELNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECNKSLLSQRWEWPHQFI 282
           FVEELNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLEC+K+LLS          
Sbjct: 84  FVEELNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECDKTLLSH--------- 143

Query: 283 FGSFAPSNSVSTLLSHSRSRSRIYA 308
               +   S S+ LS  ++RSR+Y+
Sbjct: 144 --DGSGHISFSSALSLRQTRSRLYS 157

[Close]

BLAST of Carg19120 vs. NCBI nr
Match: XP_023530342.1 (GPI-anchored protein LLG2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 5.1e-54
Identity = 111/150 (74.00%), Postives = 120/150 (80.00%), Query Frame = 0


Query: 163 VFADEALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCS 222
           V + EAL AGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYP   CCHALLEFCCS
Sbjct: 24  VLSYEALIAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPATSCCHALLEFCCS 83

Query: 223 FVEELNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECNKSLLSQRWEWPHQFI 282
           FVEELNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLEC K LLSQ         
Sbjct: 84  FVEELNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECGKPLLSQ--------- 143

Query: 283 FGSFAPSNSVSTLLSHSRSRSRIYAPCIAL 313
               +   S+S+  S  ++RSR+Y+  +AL
Sbjct: 144 --DGSGHISLSSARSLRQTRSRLYSLALAL 162

[Close]

BLAST of Carg19120 vs. ExPASy Swiss-Prot
Match: Q9FKT1 (GPI-anchored protein LLG1 OS=Arabidopsis thaliana OX=3702 GN=LLG1 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.7e-34
Identity = 61/91 (67.03%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 176 GRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEELNDRTNNCA 235
           GR+LLQ +K C V+ E  NYTI+TS+CKGPKYPPK CC A  +F C + ++LND +++CA
Sbjct: 39  GRNLLQTKKTCPVNFEFMNYTIITSKCKGPKYPPKECCGAFKDFACPYTDQLNDLSSDCA 98

Query: 236 TTMFSYINLYGQYPPGLFANQCKGGEQGLEC 267
           TTMFSYINLYG+YPPGLFANQCK G++GLEC
Sbjct: 99  TTMFSYINLYGKYPPGLFANQCKEGKEGLEC 129

[Close]

BLAST of Carg19120 vs. ExPASy Swiss-Prot
Match: Q9M0I0 (GPI-anchored protein LLG3 OS=Arabidopsis thaliana OX=3702 GN=LLG3 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.7e-31
Identity = 58/92 (63.04%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 175 TGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEELNDRTNNC 234
           T R+LLQA+  C  D  A+NYTI+TS+CKGP YP KVCC A  +F C F E LND   +C
Sbjct: 37  TSRALLQAKATCKEDFAAKNYTIITSKCKGPNYPAKVCCSAFKDFACPFAEVLNDEKTDC 96

Query: 235 ATTMFSYINLYGQYPPGLFANQCKGGEQGLEC 267
           A+TMFSYINLYG+YPPG+FAN CK G++GL+C
Sbjct: 97  ASTMFSYINLYGRYPPGIFANMCKEGKEGLDC 128

[Close]

BLAST of Carg19120 vs. ExPASy Swiss-Prot
Match: Q6NLF4 (GPI-anchored protein LLG2 OS=Arabidopsis thaliana OX=3702 GN=LLG2 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.8e-30
Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 175 TGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEELNDRTNNC 234
           T R+LLQ +  C  D   +NYTI+TS+CKGP YP  VCC A  +F C F E LND  N+C
Sbjct: 33  TSRALLQTRTTCKEDFANKNYTIITSRCKGPNYPANVCCSAFKDFACPFAEVLNDEKNDC 92

Query: 235 ATTMFSYINLYGQYPPGLFANQCKGGEQGLEC 267
           A+TMFSYINLYG+YPPG+FAN CK G++GL+C
Sbjct: 93  ASTMFSYINLYGRYPPGIFANMCKEGKEGLDC 124

[Close]

BLAST of Carg19120 vs. ExPASy Swiss-Prot
Match: B3GS44 (GPI-anchored protein LORELEI OS=Arabidopsis thaliana OX=3702 GN=LRE PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.3e-25
Identity = 47/92 (51.09%), Postives = 66/92 (71.74%), Query Frame = 0


Query: 175 TGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEELNDRTNNC 234
           +GR+L  A+K+C V+ E  +Y +LT +CKGP +P K CC A  EF C +V ++ND  ++C
Sbjct: 35  SGRNLRHAKKKCEVNFEYMDYKVLTKRCKGPAFPAKECCSAFKEFACPYVSQINDMNSDC 94

Query: 235 ATTMFSYINLYGQYPPGLFANQCKGGEQGLEC 267
           A TMFSY+N+YG YP GLFAN+C+  + GL C
Sbjct: 95  AQTMFSYMNIYGNYPTGLFANECRERKDGLVC 126

[Close]

BLAST of Carg19120 vs. ExPASy TrEMBL
Match: A0A6J1ERR5 (GPI-anchored protein LLG2-like OS=Cucurbita moschata OX=3662 GN=LOC111437199 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 2.2e-58
Identity = 116/146 (79.45%), Postives = 124/146 (84.93%), Query Frame = 0


Query: 167 EALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEE 226
           EALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEE
Sbjct: 28  EALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEE 87

Query: 227 LNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECNKSLLSQRWEWPHQFIFGSF 286
           LNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECNKSLLSQ             
Sbjct: 88  LNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECNKSLLSQ-----------GG 147

Query: 287 APSNSVSTLLSHSRSRSRIYAPCIAL 313
           +   S+S+  S  ++RSR+Y+  +AL
Sbjct: 148 SGHISLSSARSLRQTRSRLYSLTLAL 162

[Close]

BLAST of Carg19120 vs. ExPASy TrEMBL
Match: A0A6J1JN29 (GPI-anchored protein LLG2-like OS=Cucurbita maxima OX=3661 GN=LOC111486174 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 7.7e-56
Identity = 111/145 (76.55%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 163 VFADEALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCS 222
           V + EALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYP K+CCHALLEFCCS
Sbjct: 24  VLSYEALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPAKLCCHALLEFCCS 83

Query: 223 FVEELNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECNKSLLSQRWEWPHQFI 282
           FVEELNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLEC+K+LLS          
Sbjct: 84  FVEELNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECDKTLLSH--------- 143

Query: 283 FGSFAPSNSVSTLLSHSRSRSRIYA 308
               +   S S+ LS  ++RSR+Y+
Sbjct: 144 --DGSGHISFSSALSLRQTRSRLYS 157

[Close]

BLAST of Carg19120 vs. ExPASy TrEMBL
Match: A0A1S4E132 (GPI-anchored protein LORELEI-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495517 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.0e-44
Identity = 94/147 (63.95%), Postives = 110/147 (74.83%), Query Frame = 0


Query: 166 DEALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVE 225
           +EALK+G+ TGRSLLQA+K C VDME QNYTILTS+CKGPKYP  +CC ALLEFCC FV+
Sbjct: 9   NEALKSGQFTGRSLLQAKKNCPVDMEGQNYTILTSKCKGPKYPATLCCEALLEFCCGFVD 68

Query: 226 ELNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECNKSLLSQRWEWPHQFIFGS 285
           ELND TNNCA TMFSYINLYGQYPPGLFANQCK G+QGL C+K+L +Q  +   +     
Sbjct: 69  ELNDMTNNCAETMFSYINLYGQYPPGLFANQCKEGKQGLSCDKALQAQAEKAEIK----- 128

Query: 286 FAPSNSVSTLLSHSRSRSRIYAPCIAL 313
            A S++ STLL+  R  S   A    L
Sbjct: 129 -AASSASSTLLTPPRLLSLALASTFIL 149

[Close]

BLAST of Carg19120 vs. ExPASy TrEMBL
Match: A0A1S4E0F2 (GPI-anchored protein LORELEI-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495517 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 6.8e-44
Identity = 94/146 (64.38%), Postives = 109/146 (74.66%), Query Frame = 0


Query: 167 EALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEE 226
           EALK+G+ TGRSLLQA+K C VDME QNYTILTS+CKGPKYP  +CC ALLEFCC FV+E
Sbjct: 32  EALKSGQFTGRSLLQAKKNCPVDMEGQNYTILTSKCKGPKYPATLCCEALLEFCCGFVDE 91

Query: 227 LNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECNKSLLSQRWEWPHQFIFGSF 286
           LND TNNCA TMFSYINLYGQYPPGLFANQCK G+QGL C+K+L +Q  +   +      
Sbjct: 92  LNDMTNNCAETMFSYINLYGQYPPGLFANQCKEGKQGLSCDKALQAQAEKAEIK------ 151

Query: 287 APSNSVSTLLSHSRSRSRIYAPCIAL 313
           A S++ STLL+  R  S   A    L
Sbjct: 152 AASSASSTLLTPPRLLSLALASTFIL 171

[Close]

BLAST of Carg19120 vs. ExPASy TrEMBL
Match: A0A1S4E0D8 (GPI-anchored protein LORELEI-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495517 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 6.8e-44
Identity = 94/146 (64.38%), Postives = 109/146 (74.66%), Query Frame = 0


Query: 167 EALKAGKPTGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEE 226
           EALK+G+ TGRSLLQA+K C VDME QNYTILTS+CKGPKYP  +CC ALLEFCC FV+E
Sbjct: 61  EALKSGQFTGRSLLQAKKNCPVDMEGQNYTILTSKCKGPKYPATLCCEALLEFCCGFVDE 120

Query: 227 LNDRTNNCATTMFSYINLYGQYPPGLFANQCKGGEQGLECNKSLLSQRWEWPHQFIFGSF 286
           LND TNNCA TMFSYINLYGQYPPGLFANQCK G+QGL C+K+L +Q  +   +      
Sbjct: 121 LNDMTNNCAETMFSYINLYGQYPPGLFANQCKEGKQGLSCDKALQAQAEKAEIK------ 180

Query: 287 APSNSVSTLLSHSRSRSRIYAPCIAL 313
           A S++ STLL+  R  S   A    L
Sbjct: 181 AASSASSTLLTPPRLLSLALASTFIL 200

[Close]

BLAST of Carg19120 vs. TAIR 10
Match: AT5G56170.1 (LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 )

HSP 1 Score: 146.7 bits (369), Expect = 3.3e-35
Identity = 61/91 (67.03%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 176 GRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEELNDRTNNCA 235
           GR+LLQ +K C V+ E  NYTI+TS+CKGPKYPPK CC A  +F C + ++LND +++CA
Sbjct: 39  GRNLLQTKKTCPVNFEFMNYTIITSKCKGPKYPPKECCGAFKDFACPYTDQLNDLSSDCA 98

Query: 236 TTMFSYINLYGQYPPGLFANQCKGGEQGLEC 267
           TTMFSYINLYG+YPPGLFANQCK G++GLEC
Sbjct: 99  TTMFSYINLYGKYPPGLFANQCKEGKEGLEC 129

[Close]

BLAST of Carg19120 vs. TAIR 10
Match: AT4G28280.2 (LORELEI-LIKE-GPI ANCHORED PROTEIN 3 )

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-32
Identity = 58/92 (63.04%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 175 TGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEELNDRTNNC 234
           T R+LLQA+  C  D  A+NYTI+TS+CKGP YP KVCC A  +F C F E LND   +C
Sbjct: 37  TSRALLQAKATCKEDFAAKNYTIITSKCKGPNYPAKVCCSAFKDFACPFAEVLNDEKTDC 96

Query: 235 ATTMFSYINLYGQYPPGLFANQCKGGEQGLEC 267
           A+TMFSYINLYG+YPPG+FAN CK G++GL+C
Sbjct: 97  ASTMFSYINLYGRYPPGIFANMCKEGKEGLDC 128

[Close]

BLAST of Carg19120 vs. TAIR 10
Match: AT2G20700.1 (LORELEI-LIKE-GPI ANCHORED PROTEIN 2 )

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-31
Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = 0


Query: 175 TGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEELNDRTNNC 234
           T R+LLQ +  C  D   +NYTI+TS+CKGP YP  VCC A  +F C F E LND  N+C
Sbjct: 33  TSRALLQTRTTCKEDFANKNYTIITSRCKGPNYPANVCCSAFKDFACPFAEVLNDEKNDC 92

Query: 235 ATTMFSYINLYGQYPPGLFANQCKGGEQGLEC 267
           A+TMFSYINLYG+YPPG+FAN CK G++GL+C
Sbjct: 93  ASTMFSYINLYGRYPPGIFANMCKEGKEGLDC 124

[Close]

BLAST of Carg19120 vs. TAIR 10
Match: AT4G28280.1 (LORELEI-LIKE-GPI ANCHORED PROTEIN 3 )

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-29
Identity = 52/81 (64.20%), Postives = 63/81 (77.78%), Query Frame = 0


Query: 186 CTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEELNDRTNNCATTMFSYINLY 245
           C  D  A+NYTI+TS+CKGP YP KVCC A  +F C F E LND   +CA+TMFSYINLY
Sbjct: 22  CKEDFAAKNYTIITSKCKGPNYPAKVCCSAFKDFACPFAEVLNDEKTDCASTMFSYINLY 81

Query: 246 GQYPPGLFANQCKGGEQGLEC 267
           G+YPPG+FAN CK G++GL+C
Sbjct: 82  GRYPPGIFANMCKEGKEGLDC 102

[Close]

BLAST of Carg19120 vs. TAIR 10
Match: AT4G26466.1 (lorelei )

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-26
Identity = 47/92 (51.09%), Postives = 66/92 (71.74%), Query Frame = 0


Query: 175 TGRSLLQAQKECTVDMEAQNYTILTSQCKGPKYPPKVCCHALLEFCCSFVEELNDRTNNC 234
           +GR+L  A+K+C V+ E  +Y +LT +CKGP +P K CC A  EF C +V ++ND  ++C
Sbjct: 35  SGRNLRHAKKKCEVNFEYMDYKVLTKRCKGPAFPAKECCSAFKEFACPYVSQINDMNSDC 94

Query: 235 ATTMFSYINLYGQYPPGLFANQCKGGEQGLEC 267
           A TMFSY+N+YG YP GLFAN+C+  + GL C
Sbjct: 95  AQTMFSYMNIYGNYPTGLFANECRERKDGLVC 126

The following BLAST results are available for this feature:

BLAST of Carg19120 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022917.1	5.8e-199	100.00	GPI-anchored protein LLG1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6589217.1	1.5e-58	78.00	GPI-anchored protein LLG3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022930832.1	4.5e-58	79.45	GPI-anchored protein LLG2-like [Cucurbita moschata]	[more]
XP_022988974.1	1.6e-55	76.55	GPI-anchored protein LLG2-like [Cucurbita maxima]	[more]
XP_023530342.1	5.1e-54	74.00	GPI-anchored protein LLG2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg19120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKT1	4.7e-34	67.03	GPI-anchored protein LLG1 OS=Arabidopsis thaliana OX=3702 GN=LLG1 PE=1 SV=1	[more]
Q9M0I0	1.7e-31	63.04	GPI-anchored protein LLG3 OS=Arabidopsis thaliana OX=3702 GN=LLG3 PE=2 SV=1	[more]
Q6NLF4	1.8e-30	60.87	GPI-anchored protein LLG2 OS=Arabidopsis thaliana OX=3702 GN=LLG2 PE=1 SV=1	[more]
B3GS44	2.3e-25	51.09	GPI-anchored protein LORELEI OS=Arabidopsis thaliana OX=3702 GN=LRE PE=1 SV=1	[more]

BLAST of Carg19120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERR5	2.2e-58	79.45	GPI-anchored protein LLG2-like OS=Cucurbita moschata OX=3662 GN=LOC111437199 PE=...	[more]
A0A6J1JN29	7.7e-56	76.55	GPI-anchored protein LLG2-like OS=Cucurbita maxima OX=3661 GN=LOC111486174 PE=4 ...	[more]
A0A1S4E132	4.0e-44	63.95	GPI-anchored protein LORELEI-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A1S4E0F2	6.8e-44	64.38	GPI-anchored protein LORELEI-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A1S4E0D8	6.8e-44	64.38	GPI-anchored protein LORELEI-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]

BLAST of Carg19120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56170.1	3.3e-35	67.03	LORELEI-LIKE-GPI-ANCHORED PROTEIN 1	[more]
AT4G28280.2	1.2e-32	63.04	LORELEI-LIKE-GPI ANCHORED PROTEIN 3	[more]
AT2G20700.1	1.3e-31	60.87	LORELEI-LIKE-GPI ANCHORED PROTEIN 2	[more]
AT4G28280.1	1.2e-29	64.20	LORELEI-LIKE-GPI ANCHORED PROTEIN 3	[more]
AT4G26466.1	1.7e-26	51.09	lorelei	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..118
None	No IPR available	PANTHER	PTHR31533:SF2	GPI-ANCHORED PROTEIN LLG1-RELATED	coord: 166..269
IPR039307	GPI-anchored protein LORELEI-like	PANTHER	PTHR31533	GPI-ANCHORED PROTEIN LLG1-RELATED-RELATED	coord: 166..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19120-RA	Carg19120-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane