Carg19108 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19108
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Monoglyceride lipase-like
Location	Carg_Chr11: 12402922 .. 12405924 (-)
RNA-Seq Expression	Carg19108
Synteny	Carg19108

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGGCGAGCAAGAATGGGGCGACATAGCGCCGCCACTGCCGGCGGTGTTGCCGTTAAACCCAGAAAGAGAGGAGTATTGGAGTCGATTTGATGATTCTGTTAATGCGGTTTCGTTTGGGTTTGTAGCGACTGCCATTCTAATCTCTATGTTCCTTGTTATGGCCATTTTTGAGAGGTTTCTTAGACCCAGGACGGCGGCGGACATGGGCCGGCCGCCTTCTGATCTTGAAGCACAGATGGTGTTCGATGAAAAGCTTCGTTACCCATCTCCCAAGGTTCTTGTCTTCTCTTCTCTGCTACTGCATTTTGATGTTGGCTGATATCTTGCTTGCTTTTCTAAATTCAAATAGTTTCTTTATCTAAGAACACAATAAATTCCTTTGGTGTCAATTAATGATGTCTTGACTATTTTTGAACAGTTTTCTTCTGAAAATTTCTGTATTATCTCTGTTTGCTTACATTAATATGATAGTTTTTCCTTATTCTAGATGTTAATGATAATGGACCCACACCATGTAGGTAGCATGTGTTTTTGTCTCAACTGTGATAGCAATCCAACCAGGAACAAGATTTGAGAGGCAAAACAAGTTCACAAGGCATTAAACTGTGTCAAGCTGCTCATGGTTTCTTAAGCATTAGTAGCTAATGAACGGTGGGATCCCATGTCGATTGGAGAGGGGAATGAAGTATTCCTTACAAGGGTGTGGAAACCTCTCCCTAAAAGACGTATTTTAAAATCTTGAGTGGAAGCCAGAAGGGAAAACTCATAGAGGATAATACTGCTAGTGGTGGGTTTGGGTTGTTACAAATGGTATCAGAGCCAGATACCGAGCGTTGTGTTGACGAGGACGCTAGGCCTCCAAGAAGGGTGGAGGGTGTGGAAATCACTTAAGGGTGGAAGGTGTGGAAACCACTTAAAGGTGGAGGGTGTGAAAACCTCTCCCTAACAGACAAGGGCCCTAATAGACGATGGAGGGTGTGAAAACCTCTCCCTAACAGACAAGGGCCCTAATAGACGATGGAGGGTGTGGAAGCCTCTCAAGGATGGAGGGTGTGAAAACCTCTCCCTAACAGACAAGAGCCCTAATAGACGATGGAGGGTGTGGAAGCCTCTCAGGGATGGAGGGTGTGAAAACCTCTCCCTAATATACAAGGGCCCTAATAGACGAGGGGAACAAAGTATTCCTTATAAGATTATGGAAACCTCTCCCTAACATACGCGTTTTAAAACATTGAGGAGAAACCCAAAAGGGAAAGCCCAAAGAGGACAATATTTGCTAGCGGTATGACATTTTGAATGAGCAGATTATTCAATGTCGTATCGATTTAACAAGTTTCGTTGACAATTCAATCCTATACCATTTAATGCATTGTTCATACAAACATAATCACATGCTATGTCTCCCTTTGTGATTACAATATAGAAATATGCACATATTTTGAAGTATTTATAGCTTTAATAAAGTGTGTCAAAGTCTAAGCTGTCACCATTTTCAATATCCTTTCCCTACATTCTATAAGGTATAGTTGTACCATATTAGCATGTACAGCTGAGTTTCAATTCTTTATGTTGGAAAGTATACTAACAGAATAGAAGGAGAGGTCATGGATGATTTCGAATCGGCTTCCACTAGTTTGTGTTCTAATCTTGCACCTCAAGTATCATAAAGTTGTTCTCCTTTTTGCTCGTAGGCCAGCTATTTTCGACTCAAAGTCTAAATGGTGATCATTATTAATGAGTTTTCTTTGTTGTTTGAGGACATTTTCTTTTAATCACCATCATGTTTGATCATGTGCCTTTTTCGTTCTCTTCGTAACGGGAAAAAGGCGAAAGAAAAAGGGGAGTGAGGTTGTGAGATCCCACGTCGGTTGGAGATGGGAACGAAACATTTTTTATAAGGATGTAGAAGCCTCTCCTTAGCCGTTTTAAAATCTTTGAGGAAAAACCCAATAGGAAAAGTTCAAAGAGGACAATATTTGCTAGTAATGGGCTTGAACTGTTGCAAATGGTATCAGAGTCAAACACTGGGCGGTGTGCTAGTGAGGACGCTGAGCCCCCAAAGAGGGGTGGACACCGAACGGTGTGCCAGCGGGGATACTGAGCCATGAAGAGGGGTGGACACCGAGTGGTGTGCCAACGAGGACGCTGAGCCATGAAGAGGGATGGACACCGAGTGGAATGCTAGCAAAGAGGGGTGAACACCGAGTGGTGTGCCAGCGAGGACGCTGAGCTACGAAGAGGGGTGAACACTGAGAGGTGTGTCAGCGAGTACGTTGGACCCTAAAGGAGGGTGGACTGTGAGATCCCACATCGATTGGAGAGGGGAGAGTGCCAACAACGACGCTGGGTCTTGAAGGGGGGTTGATTGTAAGATTCCACATCGGTTGGAGAAGGGAACGGAACTTTTTTTATAAGGGTGTGGAAACTTCTCTCTAGCAAACGAGTTTTAAAAACTTTGAGTAGAAACTCGGAAGAAAAAGCCCAAAAAAAGACGATTCTTTATTATCAACTGTGACTCCACAGTGTTCAACTCATTAAACTCTCTCTCTCTGATGAACAATATGCTACAGAATTTTCATGCATGAATTTCTACGAACAATCATTATTTTGTGGACCATGGACCCATTTTTGCACCGTTTCTGCTAAATTGTTGCAGCAATCTCAGAATCATGATAGTAGCAGCTATAATATAGTTCTTATGGTAATTAGATGAGTAATAGAGAAGCAACCTACTTTAAACTGATACACTTTTTGACTTGACTTATGTAGATGACTGTTTACGGTCGAGGAGTATCGGTGTTGATGCCCGGCGAAGCGATTCCAACCTACATTGCCCACCCTGTTCCTGCACCGTGCCCTCCCGAGCCCATTTTGAAGCCTCTGCATCCACATAACTTGAGCATCTGCCCGCCCTCAAGCTTAACAACAAGCTCCAACATCAGTTGACTAAAGAAACGTCATTACAGAACAAGGGTCAGGTCATGTAACAGCTCAAGCC

mRNA sequence

ATGGGCGGCGAGCAAGAATGGGGCGACATAGCGCCGCCACTGCCGGCGGTGTTGCCGTTAAACCCAGAAAGAGAGGAGTATTGGAGTCGATTTGATGATTCTGTTAATGCGGTTTCGTTTGGGTTTGTAGCGACTGCCATTCTAATCTCTATGTTCCTTGTTATGGCCATTTTTGAGAGGTTTCTTAGACCCAGGACGGCGGCGGACATGGGCCGGCCGCCTTCTGATCTTGAAGCACAGATGGTGTTCGATGAAAAGCTTCGTTACCCATCTCCCAAGATGACTGTTTACGGTCGAGGAGTATCGGTGTTGATGCCCGGCGAAGCGATTCCAACCTACATTGCCCACCCTGTTCCTGCACCGTGCCCTCCCGAGCCCATTTTGAAGCCTCTGCATCCACATAACTTGAGCATCTGCCCGCCCTCAAGCTTAACAACAAGCTCCAACATCAGTTGACTAAAGAAACGTCATTACAGAACAAGGGTCAGGTCATGTAACAGCTCAAGCC

Coding sequence (CDS)

ATGGGCGGCGAGCAAGAATGGGGCGACATAGCGCCGCCACTGCCGGCGGTGTTGCCGTTAAACCCAGAAAGAGAGGAGTATTGGAGTCGATTTGATGATTCTGTTAATGCGGTTTCGTTTGGGTTTGTAGCGACTGCCATTCTAATCTCTATGTTCCTTGTTATGGCCATTTTTGAGAGGTTTCTTAGACCCAGGACGGCGGCGGACATGGGCCGGCCGCCTTCTGATCTTGAAGCACAGATGGTGTTCGATGAAAAGCTTCGTTACCCATCTCCCAAGATGACTGTTTACGGTCGAGGAGTATCGGTGTTGATGCCCGGCGAAGCGATTCCAACCTACATTGCCCACCCTGTTCCTGCACCGTGCCCTCCCGAGCCCATTTTGAAGCCTCTGCATCCACATAACTTGAGCATCTGCCCGCCCTCAAGCTTAACAACAAGCTCCAACATCAGTTGA

Protein sequence

MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFERFLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPAPCPPEPILKPLHPHNLSICPPSSLTTSSNIS

Homology

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BLAST of Carg19108 vs. NCBI nr
Match: KAG7022905.1 (hypothetical protein SDJN02_16641, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 309.7 bits (792), Expect = 1.4e-80
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA
Sbjct: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120

Query: 121 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 152
           PCPPEPILKPLHPHNLSICPPSSLTTSSNIS
Sbjct: 121 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 151

[Close]

BLAST of Carg19108 vs. NCBI nr
Match: KAG6589205.1 (hypothetical protein SDJN03_17770, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 309.7 bits (792), Expect = 1.4e-80
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 55  MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 114

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA
Sbjct: 115 FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 174

Query: 121 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 152
           PCPPEPILKPLHPHNLSICPPSSLTTSSNIS
Sbjct: 175 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 205

[Close]

BLAST of Carg19108 vs. NCBI nr
Match: XP_022930795.1 (uncharacterized protein LOC111437169 isoform X1 [Cucurbita moschata])

HSP 1 Score: 307.0 bits (785), Expect = 9.1e-80
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA
Sbjct: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120

Query: 121 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 152
           PCPPEPILKPLHPHNLSICPPSSLT+SSNI+
Sbjct: 121 PCPPEPILKPLHPHNLSICPPSSLTSSSNIN 151

[Close]

BLAST of Carg19108 vs. NCBI nr
Match: XP_023531017.1 (uncharacterized protein LOC111793399 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.6 bits (784), Expect = 1.2e-79
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPRTAAD+GRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA
Sbjct: 61  FLRPRTAADIGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120

Query: 121 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 152
           PCPPEPILKPLHPHNLSICPPSSLT+SSNIS
Sbjct: 121 PCPPEPILKPLHPHNLSICPPSSLTSSSNIS 151

[Close]

BLAST of Carg19108 vs. NCBI nr
Match: XP_022988986.1 (uncharacterized protein LOC111486185 isoform X1 [Cucurbita maxima])

HSP 1 Score: 303.1 bits (775), Expect = 1.3e-78
Identity = 148/151 (98.01%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGE IPTYIAHPVPA
Sbjct: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEEIPTYIAHPVPA 120

Query: 121 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 152
           PCPPEPILKPLH HNLSICPPSSLT+SSNIS
Sbjct: 121 PCPPEPILKPLHQHNLSICPPSSLTSSSNIS 151

[Close]

BLAST of Carg19108 vs. ExPASy TrEMBL
Match: A0A6J1EXT0 (uncharacterized protein LOC111437169 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437169 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 4.4e-80
Identity = 149/151 (98.68%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA
Sbjct: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120

Query: 121 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 152
           PCPPEPILKPLHPHNLSICPPSSLT+SSNI+
Sbjct: 121 PCPPEPILKPLHPHNLSICPPSSLTSSSNIN 151

[Close]

BLAST of Carg19108 vs. ExPASy TrEMBL
Match: A0A6J1JIR2 (uncharacterized protein LOC111486185 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486185 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 6.3e-79
Identity = 148/151 (98.01%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGE IPTYIAHPVPA
Sbjct: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEEIPTYIAHPVPA 120

Query: 121 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 152
           PCPPEPILKPLH HNLSICPPSSLT+SSNIS
Sbjct: 121 PCPPEPILKPLHQHNLSICPPSSLTSSSNIS 151

[Close]

BLAST of Carg19108 vs. ExPASy TrEMBL
Match: A0A0A0K2A7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047290 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 7.8e-69
Identity = 133/151 (88.08%), Postives = 139/151 (92.05%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGEQ+WG IAP LPAV PLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGEQKWGAIAPALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPR+ A +GRPPSDLEAQMVFD K RYPSPKMTVY RGVSVLMPGE IPTYIAHP PA
Sbjct: 61  FLRPRSPAAIGRPPSDLEAQMVFDGKPRYPSPKMTVYARGVSVLMPGEEIPTYIAHPAPA 120

Query: 121 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 152
           PCPPEPILKPLH H+LS+CP SSLT+SSNIS
Sbjct: 121 PCPPEPILKPLHQHSLSMCPSSSLTSSSNIS 151

[Close]

BLAST of Carg19108 vs. ExPASy TrEMBL
Match: A0A5D3C6W5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003600 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.8e-65
Identity = 130/151 (86.09%), Postives = 135/151 (89.40%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MGGEQ+WG IAP LPAV PLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGGEQKWGAIAPALPAVSPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPR+ A +GRPPSDLEAQMVFD K RYPSPKMTVY RGVSVLMPGE IPTYIAHP PA
Sbjct: 61  FLRPRSPAAIGRPPSDLEAQMVFDGKPRYPSPKMTVYARGVSVLMPGEEIPTYIAHPAPA 120

Query: 121 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 152
           PCPPEPILKPLH H+LS+CP S    SSNIS
Sbjct: 121 PCPPEPILKPLHQHSLSMCPSS----SSNIS 147

[Close]

BLAST of Carg19108 vs. ExPASy TrEMBL
Match: A0A6J1HXD4 (uncharacterized protein LOC111468338 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468338 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.3e-65
Identity = 126/151 (83.44%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 1   MGGEQEWGDIAPPLPAVLPLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60
           MG +Q+W  IAP LPAV PLNPER+EYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER
Sbjct: 1   MGSDQKWEAIAPALPAVSPLNPERDEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFER 60

Query: 61  FLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPA 120
           FLRPR+ A +GRPPSDLEAQM+ D K RYPSPKMTVY RGVSVLMPGE IPTYIAHP PA
Sbjct: 61  FLRPRSPAAIGRPPSDLEAQMMLDGKPRYPSPKMTVYDRGVSVLMPGEEIPTYIAHPAPA 120

Query: 121 PCPPEPILKPLHPHNLSICPPSSLTTSSNIS 152
           PCPPEPILKPLH HNLS+C P+S+T+SSNIS
Sbjct: 121 PCPPEPILKPLHQHNLSLCQPTSVTSSSNIS 151

[Close]

BLAST of Carg19108 vs. TAIR 10
Match: AT1G11120.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28170.1); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 136.0 bits (341), Expect = 2.6e-32
Identity = 78/136 (57.35%), Postives = 93/136 (68.38%), Query Frame = 0


Query: 12  PPLPAVLPLNPEREEYW-SRFDDSVNAVSFGFVATAILISMFLVMAIFERFLRPRTAADM 71
           PP+ A  P+N  REE W S+FDDSVNAVSFGFVATAILISMFLVMAIFER +R  T +  
Sbjct: 16  PPIGA--PMNLRREEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIRTTTTSTT 75

Query: 72  GRPPSD------LEAQMVFD---EKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPAP 131
               S       +++++ F+    KL Y SPKMTVY  GVSVLMPG+ IPT+IAHP P P
Sbjct: 76  NSDSSSSRVLPGMDSRVGFNGAATKLGYQSPKMTVYSNGVSVLMPGDDIPTFIAHPAPVP 135

Query: 132 CPPEPILKPLHPHNLS 138
           CPP+ I +  H H  S
Sbjct: 136 CPPQNISQSQHQHGSS 149

[Close]

BLAST of Carg19108 vs. TAIR 10
Match: AT1G11120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 270 Blast hits to 255 proteins in 62 species: Archae - 0; Bacteria - 2; Metazoa - 93; Fungi - 14; Plants - 126; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). )

HSP 1 Score: 121.7 bits (304), Expect = 5.0e-28
Identity = 78/162 (48.15%), Postives = 93/162 (57.41%), Query Frame = 0


Query: 12  PPLPAVLPLNPEREEYW-SRFDDSVNAVSFGFVATAILISMFLVMAIFERFLRPRTAADM 71
           PP+ A  P+N  REE W S+FDDSVNAVSFGFVATAILISMFLVMAIFER +R  T +  
Sbjct: 16  PPIGA--PMNLRREEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIRTTTTSTT 75

Query: 72  GRPPSD------LEAQMVFD---EKLRYPSPK--------------------------MT 131
               S       +++++ F+    KL Y SPK                          MT
Sbjct: 76  NSDSSSSRVLPGMDSRVGFNGAATKLGYQSPKASNNRIVFSFSFNILKSELFIVIILRMT 135

Query: 132 VYGRGVSVLMPGEAIPTYIAHPVPAPCPPEPILKPLHPHNLS 138
           VY  GVSVLMPG+ IPT+IAHP P PCPP+ I +  H H  S
Sbjct: 136 VYSNGVSVLMPGDDIPTFIAHPAPVPCPPQNISQSQHQHGSS 175

[Close]

BLAST of Carg19108 vs. TAIR 10
Match: AT4G28170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11120.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14
Identity = 48/104 (46.15%), Postives = 59/104 (56.73%), Query Frame = 0


Query: 25  EEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFERFL----RPRTAADMGRPPSDLEAQ 84
           EE   RF+ SVNAV FG VAT +LI++FL++A FERF+     P    D   PP      
Sbjct: 51  EEGQGRFESSVNAVPFGLVATGVLIAIFLLIAFFERFMFVKPTPSPPLDQKFPP------ 110

Query: 85  MVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPAPCPP 125
                   + SPKM V  R +SVLMPGE +PT+IA     PCPP
Sbjct: 111 --------FASPKMDVCKREISVLMPGEDVPTFIAQ----PCPP 136

[Close]

BLAST of Carg19108 vs. TAIR 10
Match: AT1G09812.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G58007.2); Has 93 Blast hits to 93 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.7 bits (182), Expect = 7.1e-14
Identity = 50/120 (41.67%), Postives = 65/120 (54.17%), Query Frame = 0


Query: 19  PLNPEREEYWSRFDDSVNAVSFGFVATAILISMFLVMAIFERFLRPRTAA-------DMG 78
           P   + E  W R   S+NA+SFGFVATAILISMFL+MAIFE   RP  ++          
Sbjct: 12  PREGDSEGPW-RSSTSMNAISFGFVATAILISMFLIMAIFEHLFRPENSSFDSPHQIRQR 71

Query: 79  RPPSDLEAQMVFDEKLRYPSPKMTVYGRGVSVLMPGEAIPTYIAHPVPAPCPPEPILKPL 132
           +     + Q + D+    P   +      VSV+MPGE +P++IA P P PC  E I  PL
Sbjct: 72  QRDGSSQFQKLADQASMVPVSTVV----DVSVVMPGEKLPSHIALPAPLPCRREGIHWPL 126

[Close]

BLAST of Carg19108 vs. TAIR 10
Match: AT1G58007.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 91 Blast hits to 91 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.7 bits (169), Expect = 2.3e-12
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 34  SVNAVSFGFVATAILISMFLVMAIFERFLRPRTAADMGRPPSDLEAQMVFDEKLRYPSPK 93
           S+NA+SFGFVATAILI MF++MAI E   R   ++       D++    F +KL   +  
Sbjct: 22  SMNAISFGFVATAILILMFIIMAILEHLFRSDHSSSY-----DVDDSSQF-QKLAEKASM 81

Query: 94  MTVYGRGVSVLMPGEAIPTYIAHPVPAPCPPEPILKPLH 133
           + V    VSV+MPG+ +P+Y+A P P PC  E I  P H
Sbjct: 82  VPVTTSDVSVVMPGDKLPSYVALPAPFPCRREGIRWPSH 114

The following BLAST results are available for this feature:

BLAST of Carg19108 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022905.1	1.4e-80	100.00	hypothetical protein SDJN02_16641, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6589205.1	1.4e-80	100.00	hypothetical protein SDJN03_17770, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022930795.1	9.1e-80	98.68	uncharacterized protein LOC111437169 isoform X1 [Cucurbita moschata]	[more]
XP_023531017.1	1.2e-79	98.68	uncharacterized protein LOC111793399 [Cucurbita pepo subsp. pepo]	[more]
XP_022988986.1	1.3e-78	98.01	uncharacterized protein LOC111486185 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg19108 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg19108 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EXT0	4.4e-80	98.68	uncharacterized protein LOC111437169 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JIR2	6.3e-79	98.01	uncharacterized protein LOC111486185 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0K2A7	7.8e-69	88.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047290 PE=4 SV=1	[more]
A0A5D3C6W5	1.8e-65	86.09	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1HXD4	2.3e-65	83.44	uncharacterized protein LOC111468338 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Carg19108 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11120.2	2.6e-32	57.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G11120.1	5.0e-28	48.15	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G28170.1	1.1e-14	46.15	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G09812.1	7.1e-14	41.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G58007.1	2.3e-12	43.43	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33728:SF1	SUBFAMILY NOT NAMED	coord: 1..140
None	No IPR available	PANTHER	PTHR33728	CTTNBP 2 AMINO-TERMINAL-LIKE PROTEIN	coord: 1..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19108-RA	Carg19108-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane