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Carg19100 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTACCTGAACAGAGTCGGAATGGCGGCGAGCGTGGCGGTGGCTCAAGGCCACACGGAGATCGGACACAAGTGGAAATCTGGACTCAAATCTTTTCGACAAGGTCGGAAACTTTTGTCTTCCGGTGAAAATCCGGCGGATCTACGGCCTCTTTCGAGTTTGGTTGGATCGGAAGGTCCTGAAGCCGTCCAGAGCTTTGACGCCGCCGAGAGGATAGCGCAGAGCGAGGAATCGCTCCGGCGAGTCATGTACTTGAACTGTTGGGGCCAGGGTTGA ATGAGTTACCTGAACAGAGTCGGAATGGCGGCGAGCGTGGCGGTGGCTCAAGGCCACACGGAGATCGGACACAAGTGGAAATCTGGACTCAAATCTTTTCGACAAGGTCGGAAACTTTTGTCTTCCGGTGAAAATCCGGCGGATCTACGGCCTCTTTCGAGTTTGGTTGGATCGGAAGGTCCTGAAGCCGTCCAGAGCTTTGACGCCGCCGAGAGGATAGCGCAGAGCGAGGAATCGCTCCGGCGAGTCATGTACTTGAACTGTTGGGGCCAGGGTTGA ATGAGTTACCTGAACAGAGTCGGAATGGCGGCGAGCGTGGCGGTGGCTCAAGGCCACACGGAGATCGGACACAAGTGGAAATCTGGACTCAAATCTTTTCGACAAGGTCGGAAACTTTTGTCTTCCGGTGAAAATCCGGCGGATCTACGGCCTCTTTCGAGTTTGGTTGGATCGGAAGGTCCTGAAGCCGTCCAGAGCTTTGACGCCGCCGAGAGGATAGCGCAGAGCGAGGAATCGCTCCGGCGAGTCATGTACTTGAACTGTTGGGGCCAGGGTTGA MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSFRQGRKLLSSGENPADLRPLSSLVGSEGPEAVQSFDAAERIAQSEESLRRVMYLNCWGQG Homology
BLAST of Carg19100 vs. NCBI nr
Match: KAG6589197.1 (hypothetical protein SDJN03_17762, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022897.1 hypothetical protein SDJN02_16633, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 185.3 bits (469), Expect = 2.4e-43 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of Carg19100 vs. NCBI nr
Match: KAG7011951.1 (hypothetical protein SDJN02_26859, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 169.5 bits (428), Expect = 1.4e-38 Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 0
BLAST of Carg19100 vs. NCBI nr
Match: KAG6572339.1 (hypothetical protein SDJN03_29067, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 168.3 bits (425), Expect = 3.1e-38 Identity = 82/92 (89.13%), Postives = 88/92 (95.65%), Query Frame = 0
BLAST of Carg19100 vs. NCBI nr
Match: KAE8645762.1 (hypothetical protein Csa_020269 [Cucumis sativus]) HSP 1 Score: 162.2 bits (409), Expect = 2.2e-36 Identity = 81/92 (88.04%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of Carg19100 vs. NCBI nr
Match: KAA0031600.1 (wound-responsive family protein [Cucumis melo var. makuwa] >TYK07052.1 wound-responsive family protein [Cucumis melo var. makuwa]) HSP 1 Score: 162.2 bits (409), Expect = 2.2e-36 Identity = 81/92 (88.04%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of Carg19100 vs. ExPASy TrEMBL
Match: A0A5A7SLJ2 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003700 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36 Identity = 81/92 (88.04%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of Carg19100 vs. ExPASy TrEMBL
Match: A0A0A0K6Z3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046690 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36 Identity = 81/92 (88.04%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of Carg19100 vs. ExPASy TrEMBL
Match: A0A2N9HZV9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45844 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.8e-21 Identity = 55/92 (59.78%), Postives = 69/92 (75.00%), Query Frame = 0
BLAST of Carg19100 vs. ExPASy TrEMBL
Match: A0A5N6RB28 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014541 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.7e-21 Identity = 56/92 (60.87%), Postives = 68/92 (73.91%), Query Frame = 0
BLAST of Carg19100 vs. ExPASy TrEMBL
Match: A0A2J6L919 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_3X40041 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.4e-20 Identity = 56/92 (60.87%), Postives = 68/92 (73.91%), Query Frame = 0
BLAST of Carg19100 vs. TAIR 10
Match: AT4G28240.1 (Wound-responsive family protein ) HSP 1 Score: 67.0 bits (162), Expect = 9.0e-12 Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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