Carg19099 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19099
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
Location	Carg_Chr11: 12356856 .. 12360727 (+)
RNA-Seq Expression	Carg19099
Synteny	Carg19099

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTCCTCAATTAGATCAGCTTGGGTTGTAGCTGCCAGTGTCGGCGTTGTTGAGGCCCTAAAGGATCAAGGGATTTGCCGGTGGAATAACGTCATAAGATCGGCGCAATTCTACGCCAAAAACCATGTTGGGTCACTTTCTCAGGCCAAGAAGTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGTGGCTTCCGGCAAGCAGCAGAATCAGTCGGAGGAATCTCTGAGGACGGTCATGTACCTCAGCTGTTGGGGTCCTAATAATTGAACCGCCTCGGAGCTTCAAAGATACGCTTGAAAAACATTTATATCGAGACTACGGCGGAACCAGCGGCGGTTCGAGCGGAGTGACACCGCCGGGCGCGGTGGTGGAGTTGTTGAGCTGATTATAGATATTGATATGGTTTGGGGATGTAATTAATGGGATGCTTTGGGCGTTTGATTCTTATATGAACAATTGTAATTAATGTAATGCTTTGGGCGTTCTTGTTTCTTTATTAAATACAATTGATTCCTAATTCTTAATGTTACCAATTACTAACCTATACTAATTTGGTTACGATTCCACAACTTACCCTCTCGATCTAGATAAAAATTTCAAAAGATTCGACCGCGAGGGCTCAATTTCACAAACAAAGTGAGCTCGAGTTAGGGTTTTTTTTCTCGATCTTTCTCTAATTCTAATCGTGGAGTTGGATTCAACGTTAGTCGGTTAAAAAGAGGACCCTATTTTTCATTTCGACTAGAAACATGTGAATTTAGGGTTCTTCGTTAATCCATTTACGCCCGACTAGAAACACGTGAATTTAGGAAATTCGGCTCGTGAATAGTTTCTTAATAATAGAATCCTTCTTCATTAATCCATTTAGGTTCGATTAGAAACACGTGGATTCAAGAAACCCAGCTCAAGAAATATTGTTCCATTTAGGCTCGATTAGGAACACGTGATCGAACACATGATTCAATAATATGTTTTTAGTCACTCAAAGGAGTGATAAACGATAATAATTAATCTTAATTAATCTTAAATAAAAAGAAAAAAGGAGTGAGAAATGACAACAATACCCCTCCCGTACAATGTACCCTGTTTCACAAAGAGCGGCAGAATCCGCCAGTTTCAAGCCCAACTCCTCCGGTTTAGAAAGGCAGTTTCTCCCGAATAATTCCAACTTTACCCCTCACATTGCTGTCAAAAGAACCCGGCCTCTAGGGGCAATCAAGTCCAAGAATTATTTACAACGTATTTATTATAATAATAAGAAATATAATCCTGGTCTCCATTAGTCACCTTTAGCTAATAAAAGAATTTCCTTTTCTACAGGTATTACAAGACCATGAGGTCCAGATCCATAGATAGTAGATATTGTCTTTTTTGGGTTTTCTCTTTCGAATTTTTCCTGAATGCTTTAAATCGCGTCTACTCGGAGAAAGTTTCATAAGAGTGATTTGTTCTCCTCCCCACAAATTATATATATGGGAATTTAAAATAAAAAAGAAACCCATTTGAGAGGAGGAAATCAGCCGGTCGCGGCGGTTTACTTTCCTCGCTTCCCGGAATTCAAAACCAGGTGCCCAGTGGAATTAAAGAAAAAAACCAGGGGCCTTTTTGGAATAATCTCTATAAAACTCTCAAAATATTCCAACATTTCAGAACAGAGACAGAACAGAGATGATGAGTTCATCAAGAACAGCTTGGGTTGTCGCCGCCAGTGTCGGACTGGTGGAGGCTTTGAAAGATCAAGGGGTTTGCCGCTGGAATCACACGATTAGGTCGGTTCAGCAGTACGCTAAAAGCCATGTGAGATCTGCTTCCCAGGTCAAGAAGCTTTCTTCGCCGTCGTCTCCGGCGGTTTCCGACCAGAAATGGAAGCAGTCGGAGGAATCTTTGAGAACTGTCATGTTCTTGAGCTGTTGGGGTCCTAATAATTGACCCACCACCCCAGATTGTTCTTCTTAGGAAAGCTTTTGTATAAATTTCATTCAACATTTTTGATAAATTTTAATGAATGATTTTATTTTTGGTTTAAAATAAGATTTAAAATTTTTAATATGATAAGTGTTGGTTGATAATTACATTTATAATGAGTAATTAATATCTTTTGTCCTTGTTGAATGGACCAACCTTATCCGCAAATTAAGAACGGGCCCACTTAATAGATTCGTTGTCTGAGGATTTAGAATCTAGACCCACCAGATATTGTCATACGACATGATCATATTACTTACTTTTTCACTTCTAAGAGTAAAGACTATTCCCACCGACCAACACGAGTTATTCCATCATATTTTGTAAGAGATCACCCAACATAGAATTGATCCGAGTAAAGGACGTTCCGTTGTGGTATTTGATTCATTTATGTACCCCTCATTTACTCCGCACTATTTCTGTGGGTACAAAAAGAATTCTCTTCTTTATAGATAATCTTTTTTGGGAGGAATAATATCTATTCTTTCTTTCTATATGCTCGACATAGTTAAGAACAGTAGATTCTACCGTGCATATGCTATAGTTCTTTTTGTTAAAAGAGAATTCATTGTATGATTCAAGATCTAAATTTGTTCTCTCGAGTAGCTCTCTCCGTGCAAGAGGATAATTTTAACTACACAATTATGAAATTTCATCTTAGTTAGGGGTTTCGGGTTGAAGATTATAAAATATACGTGGCGGGTTCTTCTCTCTGAACCAATTCGAGTGATGATGATGATGATTGTGAGATCCCACATTGATTGGAGGAGGAACGAAATATTCCTTATAAGGGTGCAAAAGTCTCTCCGTAGCAAACGCGTTTTAACACCTTGAGGCTGATGGCGATACTTAATGAGCCAAAACAGACAATATCTGCCGGCAGTGGGCTTGGGGCTGTTACAAAAGGTATCAGAGTTAGAGTCCAAGCAGTGTGCCAATGAGGACACTGGGTCTCGAGGGGAGTGGATTGTGAGATCACACATCAGATCCTACATCAGTGGTAGGGGAAACGAAGCATTCTTTATAAGGGTGTGGGAACCTCTTCCTAACCGACACATTTCAAAATCGTAAGACTAACAGCAATACGTAACAGGCCAAAGAGGACAATATCTACTAGCGATAGGGTTCGGTTATTATAATGATGATGCTCGGAAATATGCTCACTGCTTGAGAGATTTCATTATAAAATGAAGGCTCTCAAGTGAGTTTCTTTCTCACGTCATAGTCGAAAAGACGAGTAAAAGAAACATTAGACCTTATCCGTGGTGGAGTGTTTCGAAAATCGTTCAAATCGGTAGAGTTAGATAGCAACACACAAACAAGACAACAAAATCAGTGGGTGAGAAGCGAGTGGTTTGCTTCTCATACTTTGGGCTCATCCTCAACCCTAATTTCACAAAAATGATCCACATTTTCCCATTTTTACCCTCCACCATTCACCAACCTACACATCATCACAAGGGCAATCCAGTCATTTCACATCAAGTGAAGAACCCACCACCTTGTACGAACTCAGTTTTTCAATGATTAGCCAGAGGTTTTCCCCATTCCACGTTCTCCAAAACACATCTATATAAACCAACCAAACCCTTTTAACCTTAATTTCATCAAACTGTACGACACAAACAAGAACAACCAAAATGTGTAGCGGAAAATACTGGACGACGGCGGCGGCGGCGAGTATTGGGGCGGTGGAGGCGTTGAAAGACCAAGGCCATTTGTGCCGGTGGAATTCTGCTGTCCGGGCTCTGTCTCAGCCCAATAAACTTCCGCCGCCGCTGCCCTCGTCGTCGTCACCGGCGGTTAGGGATTGTCGGGAAGAAGATCATAGTAAACCCAAGCAGTCCGAGGAATCTCTTAGAACTGTTATGTACTTGAGTTGTTGGGGTCCTTATTGA

mRNA sequence

ATGAGCTCCTCAATTAGATCAGCTTGGGTTGTAGCTGCCAGTGTCGGCGTTGTTGAGGCCCTAAAGGATCAAGGGATTTGCCGGTGGAATAACGTCATAAGATCGGCGCAATTCTACGCCAAAAACCATGTTGGGTCACTTTCTCAGGCCAAGAAGTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGTGGCTTCCGGCAAGCAGCAGAATCAGTCGGAGGAATCTCTGAGGACGGTCATGTACCTCAGCTGTTGGGAGATGATGAGTTCATCAAGAACAGCTTGGGTTGTCGCCGCCAGTGTCGGACTGGTGGAGGCTTTGAAAGATCAAGGGGTTTGCCGCTGGAATCACACGATTAGGTCGGTTCAGCAGTACGCTAAAAGCCATGTGAGATCTGCTTCCCAGGTCAAGAAGCTTTCTTCGCCGTCGTCTCCGGCGGTTTCCGACCAGAAATGGAAGCAGTCGGAGGAATCTTTGAGAACTGTCATCGGAAAATACTGGACGACGGCGGCGGCGGCGAGTATTGGGGCGGTGGAGGCGTTGAAAGACCAAGGCCATTTGTGCCGGTGGAATTCTGCTGTCCGGGCTCTGTCTCAGCCCAATAAACTTCCGCCGCCGCTGCCCTCGTCGTCGTCACCGGCGGTTAGGGATTGTCGGGAAGAAGATCATAGTAAACCCAAGCAGTCCGAGGAATCTCTTAGAACTGTTATGTACTTGAGTTGTTGGGGTCCTTATTGA

Coding sequence (CDS)

ATGAGCTCCTCAATTAGATCAGCTTGGGTTGTAGCTGCCAGTGTCGGCGTTGTTGAGGCCCTAAAGGATCAAGGGATTTGCCGGTGGAATAACGTCATAAGATCGGCGCAATTCTACGCCAAAAACCATGTTGGGTCACTTTCTCAGGCCAAGAAGTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGTGGCTTCCGGCAAGCAGCAGAATCAGTCGGAGGAATCTCTGAGGACGGTCATGTACCTCAGCTGTTGGGAGATGATGAGTTCATCAAGAACAGCTTGGGTTGTCGCCGCCAGTGTCGGACTGGTGGAGGCTTTGAAAGATCAAGGGGTTTGCCGCTGGAATCACACGATTAGGTCGGTTCAGCAGTACGCTAAAAGCCATGTGAGATCTGCTTCCCAGGTCAAGAAGCTTTCTTCGCCGTCGTCTCCGGCGGTTTCCGACCAGAAATGGAAGCAGTCGGAGGAATCTTTGAGAACTGTCATCGGAAAATACTGGACGACGGCGGCGGCGGCGAGTATTGGGGCGGTGGAGGCGTTGAAAGACCAAGGCCATTTGTGCCGGTGGAATTCTGCTGTCCGGGCTCTGTCTCAGCCCAATAAACTTCCGCCGCCGCTGCCCTCGTCGTCGTCACCGGCGGTTAGGGATTGTCGGGAAGAAGATCATAGTAAACCCAAGCAGTCCGAGGAATCTCTTAGAACTGTTATGTACTTGAGTTGTTGGGGTCCTTATTGA

Protein sequence

MSSSIRSAWVVAASVGVVEALKDQGICRWNNVIRSAQFYAKNHVGSLSQAKKFSSSSSSSSSAAVASGKQQNQSEESLRTVMYLSCWEMMSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVIGKYWTTAAAASIGAVEALKDQGHLCRWNSAVRALSQPNKLPPPLPSSSSPAVRDCREEDHSKPKQSEESLRTVMYLSCWGPY

Homology

[Close]

BLAST of Carg19099 vs. NCBI nr
Match: KAG7022896.1 (hypothetical protein SDJN02_16632, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 475.7 bits (1223), Expect = 2.4e-130
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MSSSIRSAWVVAASVGVVEALKDQGICRWNNVIRSAQFYAKNHVGSLSQAKKFSSSSSSS 60
           MSSSIRSAWVVAASVGVVEALKDQGICRWNNVIRSAQFYAKNHVGSLSQAKKFSSSSSSS
Sbjct: 1   MSSSIRSAWVVAASVGVVEALKDQGICRWNNVIRSAQFYAKNHVGSLSQAKKFSSSSSSS 60

Query: 61  SSAAVASGKQQNQSEESLRTVMYLSCWEMMSSSRTAWVVAASVGLVEALKDQGVCRWNHT 120
           SSAAVASGKQQNQSEESLRTVMYLSCWEMMSSSRTAWVVAASVGLVEALKDQGVCRWNHT
Sbjct: 61  SSAAVASGKQQNQSEESLRTVMYLSCWEMMSSSRTAWVVAASVGLVEALKDQGVCRWNHT 120

Query: 121 IRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVIGKYWTTAAAASIGAV 180
           IRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVIGKYWTTAAAASIGAV
Sbjct: 121 IRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVIGKYWTTAAAASIGAV 180

Query: 181 EALKDQGHLCRWNSAVRALSQPNKLPPPLPSSSSPAVRDCREEDHSKPKQSEESLRTVMY 240
           EALKDQGHLCRWNSAVRALSQPNKLPPPLPSSSSPAVRDCREEDHSKPKQSEESLRTVMY
Sbjct: 181 EALKDQGHLCRWNSAVRALSQPNKLPPPLPSSSSPAVRDCREEDHSKPKQSEESLRTVMY 240

Query: 241 LSCWGPY 248
           LSCWGPY
Sbjct: 241 LSCWGPY 247

[Close]

BLAST of Carg19099 vs. NCBI nr
Match: KAE8645761.1 (hypothetical protein Csa_020242 [Cucumis sativus])

HSP 1 Score: 278.9 bits (712), Expect = 4.3e-71
Identity = 169/253 (66.80%), Postives = 187/253 (73.91%), Query Frame = 0


Query: 11  VAASVGVVEALKDQGICRWNNVIRSAQFYAKNHVGSLSQAKKFSSSSSSSSSAAVASGKQ 70
           +AASVGVVEALKDQGICRWN+ IRSA  YAKNHV S+ QA +     + SS+A V+S +Q
Sbjct: 5   LAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRL----TGSSAAVVSSKQQ 64

Query: 71  QNQSEESLRTVMYLSCWEMMSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKS 130
           Q QSEESLRTV+              WVVAASVG+VEALKDQG+CRWNHTIRS+QQYAK+
Sbjct: 65  QKQSEESLRTVI------------KGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKN 124

Query: 131 HVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVI------GKYWTTAAAASIGAVEALK 190
           HVRS SQ KKLSSPS+ AVSD KW QSEESLRTVI      GK WTTAAAASIGAVEALK
Sbjct: 125 HVRSISQAKKLSSPSAAAVSDHKWNQSEESLRTVITRKMCAGKSWTTAAAASIGAVEALK 184

Query: 191 DQGHLCRWNS--AVRAL-SQPNKLPPPLPS---SSSPAVRDC----REEDHSKPKQSEES 248
           DQGHL R N+   VRA+ S  NKL     S   SS+  + D     RE DHSKPKQSEES
Sbjct: 185 DQGHLWRLNNKYGVRAISSHHNKLSSSSSSSSKSSASVIADSSEVKRELDHSKPKQSEES 241

[Close]

BLAST of Carg19099 vs. NCBI nr
Match: KAG6738966.1 (hypothetical protein POTOM_058601 [Populus tomentosa])

HSP 1 Score: 227.3 bits (578), Expect = 1.5e-55
Identity = 149/270 (55.19%), Postives = 176/270 (65.19%), Query Frame = 0


Query: 3   SSIRSAWVVAASVGVVEALKDQGICRWNNVIRSAQFYAKNHVGSLSQAKKFSSSSSSSSS 62
           SS   AW+VAA+VG VEALKDQG CRWN  +RS   +AKNHV S SQAKK SSSSS+  S
Sbjct: 112 SSASKAWLVAAAVGGVEALKDQGFCRWNYTLRSLHQHAKNHVRSASQAKKLSSSSSAMIS 171

Query: 63  AAVASGKQQNQSEESLRTVMYLSCWEMMSSSRTAWVVAASVGLVEALKDQGVCRWNHTIR 122
             +   K + QSEESLR VMYLSCWE MSS+  AW+VAA++G VEALKDQG CRWN+T+R
Sbjct: 172 NKIKEVKAK-QSEESLRKVMYLSCWEKMSSASKAWLVAAAIGGVEALKDQGFCRWNYTLR 231

Query: 123 SVQQYAKSHVRSASQV-KKLSSPSSPAVS----DQKWKQSEESLRTVI------------ 182
           S+ Q+AK+ V S SQ  KKL   SS  +S    ++K KQSEESLR V+            
Sbjct: 232 SLHQHAKNQVGSISQANKKLPYSSSAIISSKFKEEKAKQSEESLRKVMYLSCWVTEKMSS 291

Query: 183 -GKYWTTAAAASIGAVEALKDQGHLCRWNSAVRALSQPNK-------LPPPLPSSSSPAV 242
             K W  AAA  +G +EALKDQG  CRWN  +R+L Q  K           L SSSS  +
Sbjct: 292 ASKAWLVAAA--VGGIEALKDQG-FCRWNYTLRSLHQHAKNHVRSASQAKKLSSSSSAMI 351

Query: 243 RDCREEDHSKPKQSEESLRTVMYLSCWGPY 248
            +  +E   K KQSEESLR VMYLSCWGPY
Sbjct: 352 SNKIKE--VKAKQSEESLRKVMYLSCWGPY 375

[Close]

BLAST of Carg19099 vs. NCBI nr
Match: KAG6738967.1 (hypothetical protein POTOM_058602 [Populus tomentosa])

HSP 1 Score: 213.4 bits (542), Expect = 2.2e-51
Identity = 153/327 (46.79%), Postives = 180/327 (55.05%), Query Frame = 0


Query: 3   SSIRSAWVVAASVGVVEALKDQGICRWNNVIRSAQFYAKNHVGSLSQAKKFSSSSSSSSS 62
           SS   AW+VAA++G VEALKDQG CRWN  +RS   +AK HV S SQAKK SSSSS+  S
Sbjct: 2   SSASKAWLVAAAIGGVEALKDQGFCRWNYTLRSLHHHAKKHVRSASQAKKLSSSSSAMIS 61

Query: 63  AAVASGKQQNQSEESLRTVMYLSCW--EMMSSSRTAWVVAASVGLVEALKDQGVCRWNHT 122
             V   K + QSEESLR VMYLSCW  + MSS+  AW+VAA+VG VEALKDQG CRWN+T
Sbjct: 62  NIVKEEKAK-QSEESLRKVMYLSCWVRQKMSSASKAWLVAAAVGGVEALKDQGFCRWNYT 121

Query: 123 IRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQ---------------------------- 182
           +RS+ Q+AK+HVRSASQ KKLSS SS  +S++                            
Sbjct: 122 LRSLHQHAKNHVRSASQAKKLSSSSSAMISNKVKEVRAKQSEESLRKVISASQAKKLSSS 181

Query: 183 ------------KWKQSEESLRTVI---------------------------------GK 242
                       K KQSEESLR V+                                  K
Sbjct: 182 SSAMISNKVKEVKAKQSEESLRKVMYLSCWVLTKAKKQDEVEEITVLMSQITEKMSSASK 241

Query: 243 YWTTAAAASIGAVEALKDQGHLCRWNSAVRALSQPNK-------LPPPLPSSSSPAVRDC 248
            W  AAA  +G VEALKDQG  CRWN  +R+L Q  K           L SSSS  + + 
Sbjct: 242 AWLVAAA--VGGVEALKDQG-FCRWNYTLRSLHQHAKNHVRSASQARKLSSSSSAMISNK 301

[Close]

BLAST of Carg19099 vs. NCBI nr
Match: KAF9661811.1 (hypothetical protein SADUNF_Sadunf19G0107700 [Salix dunnii])

HSP 1 Score: 202.2 bits (513), Expect = 5.1e-48
Identity = 151/322 (46.89%), Postives = 177/322 (54.97%), Query Frame = 0


Query: 3   SSIRSAWVVAASVGVVEALKDQGICRWNNVIRSAQFYAKNHVGSLSQAKKFSSSSSSSSS 62
           SS   AW+VAA++G VEALKDQG CRWN  +RS   +AKNHV S SQAK  SSSSS+  S
Sbjct: 2   SSTSKAWMVAAAIGGVEALKDQGFCRWNYALRSLHQHAKNHVRSASQAKMLSSSSSAMIS 61

Query: 63  AAVASGKQQNQSEESLRTVMYLSCWEMMSSSRTAWVVAASVGLVEALKDQGVCRWNHTIR 122
             V   K + QSEESLR VMYL   + MSS+  AW+VAA++G VEALKDQG CRWN+T+R
Sbjct: 62  NKVKEVKAK-QSEESLRKVMYL---KKMSSTSKAWLVAAAIGGVEALKDQGFCRWNYTLR 121

Query: 123 SVQQYAKSHVRSASQVKKLSSPSSPAVS----DQKWKQSEESLRTV-------------- 182
           S+ Q+AK+HVRS SQ KKLSS SS   S    ++K KQSEESLR V              
Sbjct: 122 SLHQHAKNHVRSVSQAKKLSSSSSAMFSNIFNEEKAKQSEESLRKVMVMITKNKEERPKE 181

Query: 183 ----------------------------IGKYW-----TTA------------------- 242
                                       +G  W     TT                    
Sbjct: 182 KRKERKLTWHGVATGGWEIESHLFYKNTVGLCWFPHSKTTTEKALASVTEKMSSASKAWL 241

Query: 243 AAASIGAVEALKDQGHLCRWNSAVRALSQPNK-------LPPPLPSSSSPAVRDCREEDH 248
            AA+IG VEALKDQG  CRWN  +R+L Q  K           L SSSS  + +  +E  
Sbjct: 242 VAAAIGGVEALKDQG-FCRWNYTLRSLHQHAKNHVRSASQAKMLSSSSSAMISNKVKE-- 301

[Close]

BLAST of Carg19099 vs. ExPASy TrEMBL
Match: A0A498IM36 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_003540 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 2.8e-44
Identity = 122/257 (47.47%), Postives = 158/257 (61.48%), Query Frame = 0


Query: 1   MSSSIRSAWVVAASVGVVEALKDQGICRWNNVIRSAQFYAKNHVGSLSQAKKFSSSSSSS 60
           MS++ R AW+VAAS+G VEALKDQG+CRWN V+RS   + KN++ S SQ KK S SSSS+
Sbjct: 23  MSAACR-AWIVAASIGAVEALKDQGVCRWNGVLRSVHQHVKNNIRSYSQVKKLSDSSSSA 82

Query: 61  SSAAVASGKQQNQSEESLRTVMYLSCWEMMSSSRTAWVVAASVGLVEALKDQGVCRWNHT 120
            S      K Q   E+ LR     +  + MS++  AW+VAAS+G VEALKDQGVCRWN  
Sbjct: 83  ISM-----KMQRSQEDKLRKQAQKTIRKKMSAACRAWIVAASIGAVEALKDQGVCRWNGV 142

Query: 121 IRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVIG-KYWTTAA---AAS 180
           +R+V  +AKS++RS SQ K LS  SS A+S    +  E+ LR V+    W   A   AAS
Sbjct: 143 LRAVHHHAKSNIRSYSQAKTLSDSSSSAISMTMQRSQEDKLRKVMELNCWACRAWVVAAS 202

Query: 181 IGAVEALKDQGHLCRWNSAVRALSQPNK-------LPPPLPSSSSPAVRDCREEDHSKPK 240
           IGAVEALKDQG +CRWN  +R++ Q  K           L  SSS A+        +  +
Sbjct: 203 IGAVEALKDQG-VCRWNGVLRSVHQNAKNNIRSYSQAKKLSDSSSSAI------SMTMKR 262

Query: 241 QSEESLRTVMYLSCWGP 247
             EE ++ +M LSCWGP
Sbjct: 263 SQEEKVKKLMELSCWGP 266

[Close]

BLAST of Carg19099 vs. ExPASy TrEMBL
Match: A0A7J6HDV8 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_029428 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 5.9e-42
Identity = 131/316 (41.46%), Postives = 168/316 (53.16%), Query Frame = 0


Query: 1   MSSSIRSAWVVAASVGVVEALKDQGICRWNNVIRSAQFYAKNHVGSLSQAKKFSSSSSSS 60
           MS++ R AW+VA S+G VEALKDQG+CRWN+ +RS Q +  N+V S SQAK+ SS+S S 
Sbjct: 1   MSAACR-AWIVATSIGAVEALKDQGVCRWNHALRSLQQHVHNNVRSYSQAKRLSSNSVS- 60

Query: 61  SSAAVASGKQQNQSEESLRTVMYLSCW----------EMMSSSRTAWVVAASVGLVEALK 120
               + S + +   EE +  VM LS W          + MSS+  AW+ AA +G+VEALK
Sbjct: 61  ----LVSNQIKRSREEKITKVMELSSWGPSTIRNISKKPMSSTSRAWIAAACIGVVEALK 120

Query: 121 DQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVS----DQKWKQSEESLRTV-- 180
           DQGVCRWN T+RS+Q + K+++RS S  KK+  P+S  +S    + K KQSEESLRTV  
Sbjct: 121 DQGVCRWNSTLRSIQHHTKANLRSYSHAKKI--PTSQYLSNNFRNDKLKQSEESLRTVMI 180

Query: 181 ----------------------------------------------------IGKYWTTA 240
                                                               I K W  A
Sbjct: 181 AFRLNRNGFCDCWCVRIGSRVFIVNIDFSNVIVLQDWVRRNKTSIVIGNMSSISKGW--A 240

Query: 241 AAASIGAVEALKDQGHLCRWNSAVRALSQPNK--LPPPLPSSSSPAVRDCREEDHSKPKQ 247
            A SIG VEALKDQG +CRWNS ++++ Q  K  L     +    A          K KQ
Sbjct: 241 VATSIGVVEALKDQG-VCRWNSVLKSIQQHTKSNLRSYSQAKKISAHYSNNISKDEKLKQ 300

[Close]

BLAST of Carg19099 vs. ExPASy TrEMBL
Match: A0A7J9FRS2 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_025581 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 8.6e-41
Identity = 106/166 (63.86%), Postives = 125/166 (75.30%), Query Frame = 0


Query: 3   SSIRSAWVVAASVGVVEALKDQGICRWNNVIRSAQFYAKNHVGSLSQAKKFSSSSSSSSS 62
           SS   AWVVAAS+G VEALKDQGICRWN  +RS   +AKNHV S SQAK  SS SS++ S
Sbjct: 2   SSTSRAWVVAASIGAVEALKDQGICRWNYTVRSVVQHAKNHVRSASQAKNLSSQSSAAIS 61

Query: 63  AAVASGKQQNQSEESLRTVMY-LSCWEMMSSSRTAWVVAASVGLVEALKDQGVCRWNHTI 122
             +   K   QSEESLRTV+  ++ +  MSSS  AW+VAAS+G VEALKDQG+CRWN+T+
Sbjct: 62  KGLNKSK---QSEESLRTVIIKITVFARMSSSSRAWIVAASIGAVEALKDQGICRWNYTV 121

Query: 123 RSVQQYAKSHVRSASQVKKLSSPSSPAVSD--QKWKQSEESLRTVI 166
           RSV Q+AK+HVRSASQ K LSS SS A+S    K KQSEESLRTV+
Sbjct: 122 RSVVQHAKNHVRSASQAKNLSSQSSAAISKGLNKSKQSEESLRTVM 164

[Close]

BLAST of Carg19099 vs. ExPASy TrEMBL
Match: A0A7J8UFF6 (Uncharacterized protein OS=Gossypium klotzschianum OX=34286 GN=Goklo_016724 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.1e-40
Identity = 110/200 (55.00%), Postives = 130/200 (65.00%), Query Frame = 0


Query: 3   SSIRSAWVVAASVGVVEALKDQGICRWNNVIRSAQFYAKNHVGSLSQAKKFSSSSSSSSS 62
           +S R AW+VAAS+G VEALKDQGICRWN   ++   +AKN+V S SQAK      SS SS
Sbjct: 2   TSSRRAWIVAASIGAVEALKDQGICRWNYTAKAVVQHAKNYVRSASQAKNL----SSQSS 61

Query: 63  AAVASG-KQQNQSEESLRTVMYLSCWEM-------------------------------- 122
           AA++ G +Q  QSEESLRTVMYLSCW +                                
Sbjct: 62  AAISKGLRQSKQSEESLRTVMYLSCWGLRTERSNIVGHGWAASVGAVEALKDQAIKNQVF 121

Query: 123 --MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSP 166
             MSS+  AWVVAAS+G VEALKDQG+CRWN+T+RSV Q+AK+HVRSASQ K LSS SS 
Sbjct: 122 AKMSSTSRAWVVAASIGAVEALKDQGICRWNYTVRSVVQHAKNHVRSASQAKNLSSQSSA 181

[Close]

BLAST of Carg19099 vs. ExPASy TrEMBL
Match: A0A4Y7IFQ2 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_040657 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 7.3e-40
Identity = 127/270 (47.04%), Postives = 159/270 (58.89%), Query Frame = 0


Query: 3   SSIRSAWVVAASVGVVEALKDQ-GICRWNNVIRSAQFYAKNHV-GSLSQAKKFSSSSSSS 62
           SS   AW+VA SVGVVEALKDQ GICRWN  +RS   Y K  V  S+SQA   SS  +SS
Sbjct: 2   SSTSKAWMVAVSVGVVEALKDQAGICRWNYALRSIHQYTKKRVKSSISQATSSSSIPASS 61

Query: 63  --SSAAVASGKQQN----QSEESLRTVMYLSCWEMMSSSRTAWVVAASVGLVEALKDQ-G 122
                     KQ++    QSEESLR    L     MSS+R AW+VA SVG+VEALKDQ G
Sbjct: 62  VIPEQITVIKKQRDHELRQSEESLRK---LESMYTMSSTRKAWMVAVSVGVVEALKDQAG 121

Query: 123 VCRWNHTIRSVQQYAKSHVRSA-SQVKKLSSPSSPAV-----SDQKWKQSEESLRTVIGK 182
           +CRWNH +R++ QY K+  +S+ SQ    S P+S  +      + + KQSEES+R VI  
Sbjct: 122 MCRWNHAVRTIHQYTKNRFKSSISQATSSSIPASSVMMMKQQRNHEMKQSEESIRKVIST 181

Query: 183 YWTTAAAASIGAVEALKDQGHLCRWNSAVRALSQPNK------LPPPLPSSSSPA----- 242
                 A S+G VEALKDQ  +CRWN A+R++ Q  K      +     SSS PA     
Sbjct: 182 SKAWMVAVSVGVVEALKDQAGMCRWNYALRSIHQYTKNRVKSSISQVTSSSSIPASSVIP 241

Query: 243 --VRDCREEDHSKPKQSEESLRTVMYLSCW 245
             +   +++   + KQSEESLR VMYLSCW
Sbjct: 242 DQIMMMKQQRDHEIKQSEESLRKVMYLSCW 268

[Close]

BLAST of Carg19099 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-17
Identity = 47/86 (54.65%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 3  SSIRSAWVVAASVGVVEALKDQ-GICRWNNVIRSAQFYAKNHVGSLSQAKKFSSSSSSSS 62
          SS   AW VA S+G VEALKDQ G+CRWN ++RS   + +N+V S+SQ K+FSSSS S++
Sbjct: 2  SSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSAA 61

Query: 63 SAAVASGKQQNQSEESLRTVMYLSCW 88
            +    ++  ++EESLRTVMYLSCW
Sbjct: 62 VTSSGESEKAKKAEESLRTVMYLSCW 87

[Close]

BLAST of Carg19099 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 86.3 bits (212), Expect = 3.8e-17
Identity = 51/86 (59.30%), Postives = 62/86 (72.09%), Query Frame = 0


Query: 3  SSIRSAWVVAASVGVVEALKDQ-GICRWNNVIRSAQFYAKNHVGSLSQAKKFSSSSSSSS 62
          SS    W+VAAS+G VEALKDQ G+CRWN VIRSA  Y +N++ S+SQAKK SSSS   +
Sbjct: 2  SSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSSIDYT 61

Query: 63 SAAVASGKQQNQSEESLRTVMYLSCW 88
          +       +  Q+EESLRTVMYLSCW
Sbjct: 62 N-------KTKQAEESLRTVMYLSCW 80

[Close]

BLAST of Carg19099 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein )

HSP 1 Score: 46.2 bits (108), Expect = 4.4e-05
Identity = 22/58 (37.93%), Postives = 35/58 (60.34%), Query Frame = 0


Query: 89  MMSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSS 147
           M +  + +W VA ++  VE LKDQGV RWN+  R + + A + VR+ +   + S P+S
Sbjct: 1   MNAGKQASWAVATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTS 58

The following BLAST results are available for this feature:

BLAST of Carg19099 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022896.1	2.4e-130	100.00	hypothetical protein SDJN02_16632, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAE8645761.1	4.3e-71	66.80	hypothetical protein Csa_020242 [Cucumis sativus]	[more]
KAG6738966.1	1.5e-55	55.19	hypothetical protein POTOM_058601 [Populus tomentosa]	[more]
KAG6738967.1	2.2e-51	46.79	hypothetical protein POTOM_058602 [Populus tomentosa]	[more]
KAF9661811.1	5.1e-48	46.89	hypothetical protein SADUNF_Sadunf19G0107700 [Salix dunnii]	[more]

BLAST of Carg19099 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg19099 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A498IM36	2.8e-44	47.47	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_003540 PE=4 SV=1	[more]
A0A7J6HDV8	5.9e-42	41.46	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_029428 PE=4 SV=1	[more]
A0A7J9FRS2	8.6e-41	63.86	Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_025581 PE=4 SV=1	[more]
A0A7J8UFF6	1.1e-40	55.00	Uncharacterized protein OS=Gossypium klotzschianum OX=34286 GN=Goklo_016724 PE=4...	[more]
A0A4Y7IFQ2	7.3e-40	47.04	Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_040657 PE=4 SV=1	[more]

BLAST of Carg19099 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10270.1	1.7e-17	54.65	Wound-responsive family protein	[more]
AT4G10265.1	3.8e-17	59.30	Wound-responsive family protein	[more]
AT4G33560.1	4.4e-05	37.93	Wound-responsive family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 11..87 e-value: 7.8E-28 score: 97.3 coord: 99..165 e-value: 7.0E-22 score: 78.2 coord: 174..246 e-value: 3.0E-23 score: 82.6
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	DUF3774 DOMAIN PROTEIN-RELATED	coord: 90..165
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	DUF3774 DOMAIN PROTEIN-RELATED	coord: 172..246 coord: 1..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..233
None	No IPR available	PANTHER	PTHR33090:SF56	WOUND-RESPONSIVE FAMILY PROTEIN	coord: 172..246 coord: 1..88
None	No IPR available	PANTHER	PTHR33090:SF56	WOUND-RESPONSIVE FAMILY PROTEIN	coord: 90..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19099-RA	Carg19099-RA	mRNA