Carg19098 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19098
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein THYLAKOID FORMATION1, chloroplastic-like
Location	Carg_Chr11: 12352665 .. 12355239 (-)
RNA-Seq Expression	Carg19098
Synteny	Carg19098

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCAGTTTCGTCCTCTCTTGTTTCTTTCGTTTCTTTTTTTTTTTTTCTTCTCCCAGAAAAAATCTTCGACATGAAATCCTGTTTCTCTGGAAGTTCGTAAGATTTGCAAATTTCTTCTCATTCTTCTGCAATGGCGGCTGTTAATTCCGTGTCATTCTCAACGGTTAGTCAGTTTTCTGATCGAAGGTCGCCGGTTCCGTCGGCTCGTTCACTCGCCTCGAATTTCGACGGGTTTCGTTTCCGTTCTAGTGTTTTCTATCATCATTCGGGAGTTCGAACCTCGAGTTTCAGTTCTCGCTTGGTCATTCATTGCATGTCCACCGGAACAGGTAGCTTCTGGTGATTTGTTTTTCTTACTCGCTTACTAGACTGTTCCTTTGCTAGATTATGGTAGCAGAAACGAATTGGCTTGTTTCGATGATTTCGATGTGAACTTGTGTTTTGTTTGTTCGTTAATTGTTGAGATGGATCGTTATGGACGGAAATTTAGGTTTTAAGTAACAATTAGGCTTTCAATAGTTCGGTTTGATCAATTCTAAACTTGTTCAGTATGTTGAGATTTCTCTAGTTCGATTTCTTGGTATTTGAGTGTAGAAAATGATGTGCTATTTTCGGATTTTAGATGTGACGACTGTAGCTGAGACTAAATTGAACTTTCTAAAGGCGTATAAACGACCTATCCCTAGCATATACAACTCTGTTTTGCAAGAGTTGATTGTGCAGCAGCATTTGATGAGGTATAAGAGGACGTACCGTTATGATCCTGTTTTCGCCCTCGGTTTTGTTACTGTATATGATCAGCTTATGGATGGGTACCCTAGCGATGAGGATCGGGAGGCCATTTTCCAAGCCTACATTAAGGCGCTGAATGAGGATCCAGAGCAATATAGGTTTGGCCATGTATTCCCCTTTGCTTTTACCATCCCTGATCTCTATCTCTTCTTGCCATCTAATAAATTCACTAGCCTTGTTCATAGATAGTAAACATTGTTAAGTTGAAAAAAACATGATATGATTCCACTTACAGCAAAAATACGACGATTCTTATTTCAACTTTTATCTTCTTTCTACTATTTCACATCTTAATTTGGACTTAGTTGTCTAAATGACTAGATTATTTGGTCAAATCACATGGTAATCTAATTAACGGATGTTTACTCTTTGTTCAATATCTCCAAGAGTGGAATTTTCTTCACTGGAAATTATATTCCATCCTTCGGCCATTATTCCAATAATTTCAAGAAGGTTTTTCTTCATTTTTAGTTCTACTTTCTGTTATACCGTCCAGAATTGATGCTCAAAAATTGGAAGAGTGGGCTCGGTCTCAGTCTGCAGCTTCATTGGTTGAATTTGCATCAAAAGAAGGAGAAGTTGAGAGTATTTTGAAAGACATTGCAGAACGAGCTGCGAGTAAGGGGAGTTTCAGTTACAGCCGATTTTTTGCTATTGGGCTATTTCGACTCCTCGAATTGGCAAATGCTACTGAACCCAGTATCTTGGAAAAGGTTTATTTTATCTTCCTTTTTGTGATATAGCTTTTAAGTAGATGACGATTTTGAGGTGATAGTATATCCAGCCTATTATTGCTAAATTAAACATTTACATGATAGCCAGCCCCTCCTCTCATAGTACTTTTACTTATAGATTATATTCTTTCTCTGAGTGCTGCCATTCGTAAAGTGTAATTGTGTTTCTTGCTCATTATTATCTTTTTCACTCATTAGAGAAATTGGATCCTGATGGAAGAGTGCTTAACCTTATTCAGTTCGATAGAATTAGGTTCAAGGTACTCTTTCCTGCATAAGTCTCCATTTTACTTTTCTAGGTAACACCAATCTTTTTGTAGTATTTGGTTGAAGAGAAATATGAGCTAACCATTTTTTGGAACATTCCCCTTTGCTCGGGACAATCCCACATACACAATTACAGTGTTTTTGTGGGATTTCCTTCTCCTTTGTGGAGATTGTACTGATCTTGTGGATGTAGTTTATGCTCTTTAGTAGTCTCAACTGGTCCTTTTCATTCAGTTTATTAGCTCTTGTGAAGGGAAACATACATATGTTCCTCTGCCCCCATCAACAACAGTTATCATGAACTATTGCTTTAATTGCCCATCTCTATTTAGCTTGTCTATCACCAAACATACTTTTATTTTTCTAAAACAGCTAAAGCCATGTAATGGAGATTTTACCAAGTGTTGACATCTAACACTTTGCTGCTTCTGAACAGCTCTGTGCCGCTTTAAATGTTGACAAAAAAAGTGTGGACCGAGACCTTGATGTATACCGCAACCTGCTTTCGAAGTTGGTTCAGGCGAAAGAGCTCCTAAAGGAATACGTTGATAGGTAAGAGATTTTTAAGTTCATGGTTCCTGGCCTGGTAGATTAACATACCCACAATCTGCTCTTTCACACCACCATATTTTCTTGGATTTTATGAACCCATAATCGTTTTGAAAACAATCCAGTATTTGTCAAATCCTCTACAACTCACCGTCATATCATTTATATTTACTAGATATCCGCCACTTGGCTGTGTTTTAAGATGAATGTGATGTTTTATGAAAGTTTAAAT

mRNA sequence

TCTCAGTTTCGTCCTCTCTTGTTTCTTTCGTTTCTTTTTTTTTTTTTCTTCTCCCAGAAAAAATCTTCGACATGAAATCCTGTTTCTCTGGAAGTTCGTAAGATTTGCAAATTTCTTCTCATTCTTCTGCAATGGCGGCTGTTAATTCCGTGTCATTCTCAACGGTTAGTCAGTTTTCTGATCGAAGGTCGCCGGTTCCGTCGGCTCGTTCACTCGCCTCGAATTTCGACGGGTTTCGTTTCCGTTCTAGTGTTTTCTATCATCATTCGGGAGTTCGAACCTCGAGTTTCAGTTCTCGCTTGGTCATTCATTGCATGTCCACCGGAACAGATGTGACGACTGTAGCTGAGACTAAATTGAACTTTCTAAAGGCGTATAAACGACCTATCCCTAGCATATACAACTCTGTTTTGCAAGAGTTGATTGTGCAGCAGCATTTGATGAGGTATAAGAGGACGTACCGTTATGATCCTGTTTTCGCCCTCGGTTTTGTTACTGTATATGATCAGCTTATGGATGGGTACCCTAGCGATGAGGATCGGGAGGCCATTTTCCAAGCCTACATTAAGGCGCTGAATGAGGATCCAGAGCAATATAGAATTGATGCTCAAAAATTGGAAGAGTGGGCTCGGTCTCAGTCTGCAGCTTCATTGGTTGAATTTGCATCAAAAGAAGGAGAAGTTGAGAGTATTTTGAAAGACATTGCAGAACGAGCTGCGAGTAAGGGGAGTTTCAGTTACAGCCGATTTTTTGCTATTGGGCTATTTCGACTCCTCGAATTGGCAAATGCTACTGAACCCAGTATCTTGGAAAAGGTTTATTTTATCTTCCTTTTTGTGATATAGCTTTTAAGTAGATGACGATTTTGAGGTGATAGTATATCCAGCCTATTATTGCTAAATTAAACATTTACATGATAGCCAGCCCCTCCTCTCATAGTACTTTTACTTATAGATTATATTCTTTCTCTGAGTGCTGCCATTCGTAAAGTGTAATTGTGTTTCTTGCTCATTATTATCTTTTTCACTCATTAGAGAAATTGGATCCTGATGGAAGAGTGCTTAACCTTATTCAGTTCGATAGAATTAGGTTCAAGGTACTCTTTCCTGCATAAGTCTCCATTTTACTTTTCTAGGTAACACCAATCTTTTTGTAGTATTTGGTTGAAGAGAAATATGAGCTAACCATTTTTTGGAACATTCCCCTTTGCTCGGGACAATCCCACATACACAATTACAGTGTTTTTGTGGGATTTCCTTCTCCTTTGTGGAGATTGTACTGATCTTGTGGATGTAGTTTATGCTCTTTAGTAGTCTCAACTGGTCCTTTTCATTCAGTTTATTAGCTCTTGTGAAGGGAAACATACATATGTTCCTCTGCCCCCATCAACAACAGTTATCATGAACTATTGCTTTAATTGCCCATCTCTATTTAGCTTGTCTATCACCAAACATACTTTTATTTTTCTAAAACAGCTAAAGCCATGTAATGGAGATTTTACCAAGTGTTGACATCTAACACTTTGCTGCTTCTGAACAGCTCTGTGCCGCTTTAAATGTTGACAAAAAAAGTGTGGACCGAGACCTTGATGTATACCGCAACCTGCTTTCGAAGTTGGTTCAGGCGAAAGAGCTCCTAAAGGAATACGTTGATAGGTAAGAGATTTTTAAGTTCATGGTTCCTGGCCTGGTAGATTAACATACCCACAATCTGCTCTTTCACACCACCATATTTTCTTGGATTTTATGAACCCATAATCGTTTTGAAAACAATCCAGTATTTGTCAAATCCTCTACAACTCACCGTCATATCATTTATATTTACTAGATATCCGCCACTTGGCTGTGTTTTAAGATGAATGTGATGTTTTATGAAAGTTTAAAT

Coding sequence (CDS)

ATGGCGGCTGTTAATTCCGTGTCATTCTCAACGGTTAGTCAGTTTTCTGATCGAAGGTCGCCGGTTCCGTCGGCTCGTTCACTCGCCTCGAATTTCGACGGGTTTCGTTTCCGTTCTAGTGTTTTCTATCATCATTCGGGAGTTCGAACCTCGAGTTTCAGTTCTCGCTTGGTCATTCATTGCATGTCCACCGGAACAGATGTGACGACTGTAGCTGAGACTAAATTGAACTTTCTAAAGGCGTATAAACGACCTATCCCTAGCATATACAACTCTGTTTTGCAAGAGTTGATTGTGCAGCAGCATTTGATGAGGTATAAGAGGACGTACCGTTATGATCCTGTTTTCGCCCTCGGTTTTGTTACTGTATATGATCAGCTTATGGATGGGTACCCTAGCGATGAGGATCGGGAGGCCATTTTCCAAGCCTACATTAAGGCGCTGAATGAGGATCCAGAGCAATATAGAATTGATGCTCAAAAATTGGAAGAGTGGGCTCGGTCTCAGTCTGCAGCTTCATTGGTTGAATTTGCATCAAAAGAAGGAGAAGTTGAGAGTATTTTGAAAGACATTGCAGAACGAGCTGCGAGTAAGGGGAGTTTCAGTTACAGCCGATTTTTTGCTATTGGGCTATTTCGACTCCTCGAATTGGCAAATGCTACTGAACCCAGTATCTTGGAAAAGGTTTATTTTATCTTCCTTTTTGTGATATAG

Protein sequence

MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIHCMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGFVTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASKEGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKVYFIFLFVI

Homology

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BLAST of Carg19098 vs. NCBI nr
Match: KAG7022895.1 (Protein THYLAKOID FORMATION1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 452.2 bits (1162), Expect = 2.7e-123
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60
           MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH
Sbjct: 1   MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60

Query: 61  CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF
Sbjct: 61  CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK 180
           VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK
Sbjct: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK 180

Query: 181 EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKVYFIFLFVI 238
           EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKVYFIFLFVI
Sbjct: 181 EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKVYFIFLFVI 237

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BLAST of Carg19098 vs. NCBI nr
Match: XP_022988874.1 (protein THYLAKOID FORMATION1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 438.0 bits (1125), Expect = 5.3e-119
Identity = 227/229 (99.13%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60
           MAAVNSVSFSTVSQFSDRRSP+PSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH
Sbjct: 1   MAAVNSVSFSTVSQFSDRRSPIPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60

Query: 61  CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF
Sbjct: 61  CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK 180
           VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK
Sbjct: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK 180

Query: 181 EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKV 230
           EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEK+
Sbjct: 181 EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKL 229

[Close]

BLAST of Carg19098 vs. NCBI nr
Match: XP_022930881.1 (protein THYLAKOID FORMATION1, chloroplastic-like [Cucurbita moschata] >XP_023531402.1 protein THYLAKOID FORMATION1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 436.0 bits (1120), Expect = 2.0e-118
Identity = 226/229 (98.69%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60
           MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH
Sbjct: 1   MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60

Query: 61  CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CMS GTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF
Sbjct: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK 180
           VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK
Sbjct: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK 180

Query: 181 EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKV 230
           EGEVES+LKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEK+
Sbjct: 181 EGEVESVLKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKL 229

[Close]

BLAST of Carg19098 vs. NCBI nr
Match: KAG6589193.1 (Protein THYLAKOID FORMATION1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 435.3 bits (1118), Expect = 3.5e-118
Identity = 226/229 (98.69%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60
           MAAVNSVSFSTVSQFSDRRSPVPSAR+LASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH
Sbjct: 1   MAAVNSVSFSTVSQFSDRRSPVPSARTLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60

Query: 61  CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF
Sbjct: 61  CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK 180
           VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEF SK
Sbjct: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFESK 180

Query: 181 EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKV 230
           EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEK+
Sbjct: 181 EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKL 229

[Close]

BLAST of Carg19098 vs. NCBI nr
Match: XP_008455361.1 (PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Cucumis melo] >KAA0031606.1 protein THYLAKOID FORMATION1 [Cucumis melo var. makuwa] >TYK07058.1 protein THYLAKOID FORMATION1 [Cucumis melo var. makuwa])

HSP 1 Score: 402.9 bits (1034), Expect = 1.9e-108
Identity = 206/229 (89.96%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60
           MAAVNS+SFST++Q SDRR PVPS+RSL+SNFDGFRFR+S+F H+S VR S+FSSR+VIH
Sbjct: 1   MAAVNSISFSTLNQCSDRRFPVPSSRSLSSNFDGFRFRTSLFTHYSRVRPSTFSSRMVIH 60

Query: 61  CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CMS GTDVTTVAETKLNFLKAYKRPIPSIYN+VLQELIVQQHLMRYKRTYRYDPVFALGF
Sbjct: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK 180
           VTVYDQLM+GYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQ+AASLVEFAS+
Sbjct: 121 VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQTAASLVEFASR 180

Query: 181 EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKV 230
           EGEVESILKDIAERA SKG+FSYSRFFAIGLFRLLELANATEPSILEK+
Sbjct: 181 EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKL 229

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BLAST of Carg19098 vs. ExPASy Swiss-Prot
Match: Q7XAB8 (Protein THYLAKOID FORMATION1, chloroplastic OS=Solanum tuberosum OX=4113 GN=THF1 PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 7.8e-81
Identity = 154/230 (66.96%), Postives = 193/230 (83.91%), Query Frame = 0


Query: 1   MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60
           MAAV SVSFS ++Q ++R+S V S+RS+    D FRFRS+  +    VR+S+ +SR V+H
Sbjct: 1   MAAVTSVSFSAITQSAERKSSVSSSRSI----DTFRFRSNFSFDSVNVRSSNSTSRFVVH 60

Query: 61  C-MSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALG 120
           C  S+  D+ TVA+TKL FL AYKRPIP++YN+VLQELIVQQHL RYK++Y+YDPVFALG
Sbjct: 61  CTSSSAADLPTVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHLTRYKKSYQYDPVFALG 120

Query: 121 FVTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFAS 180
           FVTVYDQLM+GYPS+EDR AIF+AYI+AL EDPEQYR DAQKLEEWAR+Q+A +LV+F+S
Sbjct: 121 FVTVYDQLMEGYPSEEDRNAIFKAYIEALKEDPEQYRADAQKLEEWARTQNANTLVDFSS 180

Query: 181 KEGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKV 230
           KEGE+E+I KDIA+RA +K  F YSR FA+GLFRLLELAN T+P+ILEK+
Sbjct: 181 KEGEIENIFKDIAQRAGTKDGFCYSRLFAVGLFRLLELANVTDPTILEKL 226

[Close]

BLAST of Carg19098 vs. ExPASy Swiss-Prot
Match: Q9SKT0 (Protein THYLAKOID FORMATION 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=THF1 PE=1 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.3e-75
Identity = 152/228 (66.67%), Postives = 189/228 (82.89%), Query Frame = 0


Query: 3   AVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIHCM 62
           A++S+SF  + Q SD+ S   S+R LAS       R    +    + + S +S+ +IHCM
Sbjct: 5   AISSLSFPALGQ-SDKISNFASSRPLAS-----AIRICTKFSRLSLNSRS-TSKSLIHCM 64

Query: 63  STGT-DVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGFV 122
           S  T DV  V+ETK  FLKAYKRPIPSIYN+VLQELIVQQHLMRYK+TYRYDPVFALGFV
Sbjct: 65  SNVTADVPPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFV 124

Query: 123 TVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASKE 182
           TVYDQLM+GYPSD+DR+AIF+AYI+ALNEDP+QYRIDAQK+EEWARSQ++ASLV+F+SKE
Sbjct: 125 TVYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKE 184

Query: 183 GEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKV 230
           G++E++LKDIA RA SK  FSYSRFFA+GLFRLLELA+AT+P++L+K+
Sbjct: 185 GDIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPTVLDKL 225

[Close]

BLAST of Carg19098 vs. ExPASy Swiss-Prot
Match: Q84PB7 (Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=THF1 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.8e-72
Identity = 149/230 (64.78%), Postives = 182/230 (79.13%), Query Frame = 0


Query: 1   MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60
           MAA++S+ F+ + + +D R   PS  + A+         SV             SR V+ 
Sbjct: 1   MAAISSLPFAALRRAADCR---PSTAAAAAGAGAGAVVLSV--------RPRRGSRSVVR 60

Query: 61  CMSTGTDV-TTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALG 120
           C++T  DV  TVAETK+NFLK+YKRPI SIY++VLQEL+VQQHLMRYK TY+YD VFALG
Sbjct: 61  CVATAGDVPPTVAETKMNFLKSYKRPILSIYSTVLQELLVQQHLMRYKTTYQYDAVFALG 120

Query: 121 FVTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFAS 180
           FVTVYDQLM+GYPS+EDR+AIF+AYI ALNEDPEQYR DAQK+EEWARSQ+  SLVEF+S
Sbjct: 121 FVTVYDQLMEGYPSNEDRDAIFKAYITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSS 180

Query: 181 KEGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKV 230
           K+GE+E+ILKDI+ERA  KGSFSYSRFFA+GLFRLLELANATEP+IL+K+
Sbjct: 181 KDGEIEAILKDISERAQGKGSFSYSRFFAVGLFRLLELANATEPTILDKL 219

[Close]

BLAST of Carg19098 vs. ExPASy Swiss-Prot
Match: B0C3M8 (Protein Thf1 OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=thf1 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.2e-27
Identity = 68/157 (43.31%), Postives = 102/157 (64.97%), Query Frame = 0


Query: 67  DVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGFVTVYDQ 126
           ++ TV++TK  F   + RP+ S+Y  V++EL+V+ HL+R    +RYDP+FALG  T +D+
Sbjct: 3   NLRTVSDTKRAFYSIHTRPVNSVYRRVVEELMVEMHLLRVNEDFRYDPIFALGVTTSFDR 62

Query: 127 LMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEF---ASKEG- 186
            MDGY  + D++AIF A  KA   DP Q + D Q+L E A+S+SA  ++++   A+  G 
Sbjct: 63  FMDGYQPENDKDAIFSAICKAQEADPVQMKKDGQRLTELAQSKSAQEMLDWITQAANSGG 122

Query: 187 -EVESILKDIAERAASKGSFSYSRFFAIGLFRLLELA 219
            E++  L++IA+       F YSR FAIGLF LLEL+
Sbjct: 123 DELQWQLRNIAQNP----KFKYSRLFAIGLFTLLELS 155

[Close]

BLAST of Carg19098 vs. ExPASy Swiss-Prot
Match: Q116P5 (Protein Thf1 OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=thf1 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.5e-26
Identity = 65/152 (42.76%), Postives = 92/152 (60.53%), Query Frame = 0


Query: 70  TVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGFVTVYDQLMD 129
           TV++TK  F   + RPI SIYN V++EL+V+ HL+     Y Y+P +ALG VT +D+ M 
Sbjct: 6   TVSDTKKTFYHFHTRPINSIYNRVIEELLVEMHLISVNVDYSYNPFYALGVVTAFDRFMQ 65

Query: 130 GYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEF--ASKEGEVESI 189
           GY   ED+ +IF A I+   EDP +YR DA+ LE+ A   SA+ ++ +   SK  +    
Sbjct: 66  GYSPQEDKTSIFNALIQGQEEDPNKYRSDAKGLEDLAGKISASDILSWICLSKNIDNTQY 125

Query: 190 LKDIAERAASKGSFSYSRFFAIGLFRLLELAN 220
           L+D     +    F YSR FAIGLF LLE+ +
Sbjct: 126 LQDDLRAISENSKFRYSRLFAIGLFTLLEIVD 157

[Close]

BLAST of Carg19098 vs. ExPASy TrEMBL
Match: A0A6J1JMT7 (protein THYLAKOID FORMATION1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111486096 PE=3 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 2.6e-119
Identity = 227/229 (99.13%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60
           MAAVNSVSFSTVSQFSDRRSP+PSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH
Sbjct: 1   MAAVNSVSFSTVSQFSDRRSPIPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60

Query: 61  CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF
Sbjct: 61  CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK 180
           VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK
Sbjct: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK 180

Query: 181 EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKV 230
           EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEK+
Sbjct: 181 EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKL 229

[Close]

BLAST of Carg19098 vs. ExPASy TrEMBL
Match: A0A6J1ES50 (protein THYLAKOID FORMATION1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111437233 PE=3 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 9.8e-119
Identity = 226/229 (98.69%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60
           MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH
Sbjct: 1   MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60

Query: 61  CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CMS GTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF
Sbjct: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK 180
           VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK
Sbjct: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK 180

Query: 181 EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKV 230
           EGEVES+LKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEK+
Sbjct: 181 EGEVESVLKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKL 229

[Close]

BLAST of Carg19098 vs. ExPASy TrEMBL
Match: A0A5D3C7D3 (Protein THYLAKOID FORMATION1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003760 PE=3 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 9.2e-109
Identity = 206/229 (89.96%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60
           MAAVNS+SFST++Q SDRR PVPS+RSL+SNFDGFRFR+S+F H+S VR S+FSSR+VIH
Sbjct: 1   MAAVNSISFSTLNQCSDRRFPVPSSRSLSSNFDGFRFRTSLFTHYSRVRPSTFSSRMVIH 60

Query: 61  CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CMS GTDVTTVAETKLNFLKAYKRPIPSIYN+VLQELIVQQHLMRYKRTYRYDPVFALGF
Sbjct: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK 180
           VTVYDQLM+GYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQ+AASLVEFAS+
Sbjct: 121 VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQTAASLVEFASR 180

Query: 181 EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKV 230
           EGEVESILKDIAERA SKG+FSYSRFFAIGLFRLLELANATEPSILEK+
Sbjct: 181 EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKL 229

[Close]

BLAST of Carg19098 vs. ExPASy TrEMBL
Match: A0A1S3C0V5 (protein THYLAKOID FORMATION1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495547 PE=3 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 9.2e-109
Identity = 206/229 (89.96%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60
           MAAVNS+SFST++Q SDRR PVPS+RSL+SNFDGFRFR+S+F H+S VR S+FSSR+VIH
Sbjct: 1   MAAVNSISFSTLNQCSDRRFPVPSSRSLSSNFDGFRFRTSLFTHYSRVRPSTFSSRMVIH 60

Query: 61  CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CMS GTDVTTVAETKLNFLKAYKRPIPSIYN+VLQELIVQQHLMRYKRTYRYDPVFALGF
Sbjct: 61  CMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK 180
           VTVYDQLM+GYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQ+AASLVEFAS+
Sbjct: 121 VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQTAASLVEFASR 180

Query: 181 EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKV 230
           EGEVESILKDIAERA SKG+FSYSRFFAIGLFRLLELANATEPSILEK+
Sbjct: 181 EGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKL 229

[Close]

BLAST of Carg19098 vs. ExPASy TrEMBL
Match: A0A6J1C3B8 (protein THYLAKOID FORMATION1, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007981 PE=3 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.7e-108
Identity = 207/229 (90.39%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 1   MAAVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIH 60
           MAAVNSVSFS +SQ S+RR  VPSARSLASNFDGFRFR+SVF H+SGVRTSS+SSR+V+H
Sbjct: 1   MAAVNSVSFSALSQCSERRLLVPSARSLASNFDGFRFRTSVFCHYSGVRTSSYSSRMVVH 60

Query: 61  CMSTGTDVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGF 120
           CMS GTDVTTVAETK NFLK YKRPIPSIYN+VLQELIVQQHLMRYKRTYRYDPVFALGF
Sbjct: 61  CMSAGTDVTTVAETKANFLKVYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFALGF 120

Query: 121 VTVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASK 180
           VTVYDQLM+GYPSDEDREAIFQAYIKALNEDPEQYRIDA+KLEEWARSQ+AASLVEFASK
Sbjct: 121 VTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKLEEWARSQTAASLVEFASK 180

Query: 181 EGEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKV 230
           EGEVESILKDIAERA  KGSFSYSRFFAIGLFRLLELANATEPSILEK+
Sbjct: 181 EGEVESILKDIAERAGGKGSFSYSRFFAIGLFRLLELANATEPSILEKL 229

[Close]

BLAST of Carg19098 vs. TAIR 10
Match: AT2G20890.1 (photosystem II reaction center PSB29 protein )

HSP 1 Score: 284.3 bits (726), Expect = 9.2e-77
Identity = 152/228 (66.67%), Postives = 189/228 (82.89%), Query Frame = 0


Query: 3   AVNSVSFSTVSQFSDRRSPVPSARSLASNFDGFRFRSSVFYHHSGVRTSSFSSRLVIHCM 62
           A++S+SF  + Q SD+ S   S+R LAS       R    +    + + S +S+ +IHCM
Sbjct: 5   AISSLSFPALGQ-SDKISNFASSRPLAS-----AIRICTKFSRLSLNSRS-TSKSLIHCM 64

Query: 63  STGT-DVTTVAETKLNFLKAYKRPIPSIYNSVLQELIVQQHLMRYKRTYRYDPVFALGFV 122
           S  T DV  V+ETK  FLKAYKRPIPSIYN+VLQELIVQQHLMRYK+TYRYDPVFALGFV
Sbjct: 65  SNVTADVPPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFV 124

Query: 123 TVYDQLMDGYPSDEDREAIFQAYIKALNEDPEQYRIDAQKLEEWARSQSAASLVEFASKE 182
           TVYDQLM+GYPSD+DR+AIF+AYI+ALNEDP+QYRIDAQK+EEWARSQ++ASLV+F+SKE
Sbjct: 125 TVYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKE 184

Query: 183 GEVESILKDIAERAASKGSFSYSRFFAIGLFRLLELANATEPSILEKV 230
           G++E++LKDIA RA SK  FSYSRFFA+GLFRLLELA+AT+P++L+K+
Sbjct: 185 GDIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDPTVLDKL 225

The following BLAST results are available for this feature:

BLAST of Carg19098 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022895.1	2.7e-123	100.00	Protein THYLAKOID FORMATION1, chloroplastic [Cucurbita argyrosperma subsp. argyr...	[more]
XP_022988874.1	5.3e-119	99.13	protein THYLAKOID FORMATION1, chloroplastic-like [Cucurbita maxima]	[more]
XP_022930881.1	2.0e-118	98.69	protein THYLAKOID FORMATION1, chloroplastic-like [Cucurbita moschata] >XP_023531...	[more]
KAG6589193.1	3.5e-118	98.69	Protein THYLAKOID FORMATION1, chloroplastic, partial [Cucurbita argyrosperma sub...	[more]
XP_008455361.1	1.9e-108	89.96	PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Cucumis melo] >KAA003160...	[more]

BLAST of Carg19098 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XAB8	7.8e-81	66.96	Protein THYLAKOID FORMATION1, chloroplastic OS=Solanum tuberosum OX=4113 GN=THF1...	[more]
Q9SKT0	1.3e-75	66.67	Protein THYLAKOID FORMATION 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q84PB7	1.8e-72	64.78	Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica OX=3...	[more]
B0C3M8	2.2e-27	43.31	Protein Thf1 OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=thf1 PE=3 ...	[more]
Q116P5	5.5e-26	42.76	Protein Thf1 OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=thf1 PE=3 ...	[more]

BLAST of Carg19098 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JMT7	2.6e-119	99.13	protein THYLAKOID FORMATION1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1ES50	9.8e-119	98.69	protein THYLAKOID FORMATION1, chloroplastic-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A5D3C7D3	9.2e-109	89.96	Protein THYLAKOID FORMATION1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C0V5	9.2e-109	89.96	protein THYLAKOID FORMATION1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495...	[more]
A0A6J1C3B8	2.7e-108	90.39	protein THYLAKOID FORMATION1, chloroplastic isoform X1 OS=Momordica charantia OX...	[more]

BLAST of Carg19098 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20890.1	9.2e-77	66.67	photosystem II reaction center PSB29 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017499	Protein Thf1	PFAM	PF11264	ThylakoidFormat	coord: 70..221 e-value: 1.4E-58 score: 198.1
IPR017499	Protein Thf1	PANTHER	PTHR34793	PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC	coord: 1..230
None	No IPR available	PANTHER	PTHR34793:SF7	PHOTOSYSTEM II BIOGENESIS PROTEIN	coord: 1..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19098-RA	Carg19098-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0045037	protein import into chloroplast stroma
biological_process	GO:0045038	protein import into chloroplast thylakoid membrane
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0015979	photosynthesis