Carg19090 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19090
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Transcription factor bHLH117
Location	Carg_Chr11: 12306121 .. 12306996 (-)
RNA-Seq Expression	Carg19090
Synteny	Carg19090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGTGGAAAGTTCTGCTGGAGATGATGGTTCCACCAATGTCTGGGATGATGCTTGCTTCAACGCCATGTTTTCCGGCGTAAGTCTTCAGTCGTTTCTCGCCGGTGGTAATCAGAATCATTGTCCCTTGTTGTTGCCGTCTCTGTTCGGAGGAGGCTACATTTCCGATGCTCTTACTTTCCCCGATGCTTCAACGTCGTTGTATCCTCAGCCGAGCTCTAACTTCGTCGCTGAAAGTATTGAATCATCCGAGCCGATGAATGTGTATGAACAAACGGCGTTTGTTTTTCATGCTTCGACGTCGTTTCCTCACTTGCCGGACCTGCGTTCTTTGGGGCAATGTTCGTCGTCGTTTAACAAGCGTGCTCGAGTCGATTCTGTGTGGAATCCGTTGCAGATGGTGGAGCCGATGATGCGAGAGTGTGAGGTAAGTAGCTCCGCTGCTGTGTCTCGTACTGTTCAAATTCCTCGCAGCGCATTAGCTCGACAGCGTCGGCAGAAATTGAGCGACAAGACGCGTTGCTTGCAGAAGCTACTGCCGTGGGACAAGAAGATGGATATCTCTACAATGCTTGAAGGAGCGTTTAAGTACGTCAAGTTCCTTCAGGCGCAACTCCTTGCTCTTCAATCCATGCCTTGCGAGTCGGCCATTTCTACTAATTCGAATCATCACATAAGCGGCGTGTTTGGTGGATTGGAGAGGCTGAGCAGAAACCAACTATTGCAAGTTTTGGTTAACTCGCCGGTCGCTCAGACGATGCTTTGTTCGCAGAGTTGTTGCGTTTTCTCGGCAGAACAGTTAGGGCTTATCCAGAAGATCGCAGAGAAAAGAGTTCTTCTGCAGCAGATCTCAACGTTCCGACATAAGCCCTAG

mRNA sequence

ATGATGGTGGAAAGTTCTGCTGGAGATGATGGTTCCACCAATGTCTGGGATGATGCTTGCTTCAACGCCATGTTTTCCGGCGTAAGTCTTCAGTCGTTTCTCGCCGGTGGTAATCAGAATCATTGTCCCTTGTTGTTGCCGTCTCTGTTCGGAGGAGGCTACATTTCCGATGCTCTTACTTTCCCCGATGCTTCAACGTCGTTGTATCCTCAGCCGAGCTCTAACTTCGTCGCTGAAAGTATTGAATCATCCGAGCCGATGAATGTGTATGAACAAACGGCGTTTGTTTTTCATGCTTCGACGTCGTTTCCTCACTTGCCGGACCTGCGTTCTTTGGGGCAATGTTCGTCGTCGTTTAACAAGCGTGCTCGAGTCGATTCTGTGTGGAATCCGTTGCAGATGGTGGAGCCGATGATGCGAGAGTGTGAGGTAAGTAGCTCCGCTGCTGTGTCTCGTACTGTTCAAATTCCTCGCAGCGCATTAGCTCGACAGCGTCGGCAGAAATTGAGCGACAAGACGCGTTGCTTGCAGAAGCTACTGCCGTGGGACAAGAAGATGGATATCTCTACAATGCTTGAAGGAGCGTTTAAGTACGTCAAGTTCCTTCAGGCGCAACTCCTTGCTCTTCAATCCATGCCTTGCGAGTCGGCCATTTCTACTAATTCGAATCATCACATAAGCGGCGTGTTTGGTGGATTGGAGAGGCTGAGCAGAAACCAACTATTGCAAGTTTTGGTTAACTCGCCGGTCGCTCAGACGATGCTTTGTTCGCAGAGTTGTTGCGTTTTCTCGGCAGAACAGTTAGGGCTTATCCAGAAGATCGCAGAGAAAAGAGTTCTTCTGCAGCAGATCTCAACGTTCCGACATAAGCCCTAG

Coding sequence (CDS)

ATGATGGTGGAAAGTTCTGCTGGAGATGATGGTTCCACCAATGTCTGGGATGATGCTTGCTTCAACGCCATGTTTTCCGGCGTAAGTCTTCAGTCGTTTCTCGCCGGTGGTAATCAGAATCATTGTCCCTTGTTGTTGCCGTCTCTGTTCGGAGGAGGCTACATTTCCGATGCTCTTACTTTCCCCGATGCTTCAACGTCGTTGTATCCTCAGCCGAGCTCTAACTTCGTCGCTGAAAGTATTGAATCATCCGAGCCGATGAATGTGTATGAACAAACGGCGTTTGTTTTTCATGCTTCGACGTCGTTTCCTCACTTGCCGGACCTGCGTTCTTTGGGGCAATGTTCGTCGTCGTTTAACAAGCGTGCTCGAGTCGATTCTGTGTGGAATCCGTTGCAGATGGTGGAGCCGATGATGCGAGAGTGTGAGGTAAGTAGCTCCGCTGCTGTGTCTCGTACTGTTCAAATTCCTCGCAGCGCATTAGCTCGACAGCGTCGGCAGAAATTGAGCGACAAGACGCGTTGCTTGCAGAAGCTACTGCCGTGGGACAAGAAGATGGATATCTCTACAATGCTTGAAGGAGCGTTTAAGTACGTCAAGTTCCTTCAGGCGCAACTCCTTGCTCTTCAATCCATGCCTTGCGAGTCGGCCATTTCTACTAATTCGAATCATCACATAAGCGGCGTGTTTGGTGGATTGGAGAGGCTGAGCAGAAACCAACTATTGCAAGTTTTGGTTAACTCGCCGGTCGCTCAGACGATGCTTTGTTCGCAGAGTTGTTGCGTTTTCTCGGCAGAACAGTTAGGGCTTATCCAGAAGATCGCAGAGAAAAGAGTTCTTCTGCAGCAGATCTCAACGTTCCGACATAAGCCCTAG

Protein sequence

MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALTFPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFNKRARVDSVWNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRHKP

Homology

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BLAST of Carg19090 vs. NCBI nr
Match: XP_022930846.1 (transcription factor bHLH117-like isoform X1 [Cucurbita moschata] >XP_022930847.1 transcription factor bHLH117-like isoform X1 [Cucurbita moschata] >XP_022930848.1 transcription factor bHLH117-like isoform X1 [Cucurbita moschata] >XP_022930849.1 transcription factor bHLH117-like isoform X1 [Cucurbita moschata] >XP_022930850.1 transcription factor bHLH117-like isoform X1 [Cucurbita moschata] >KAG7022887.1 Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 573.5 bits (1477), Expect = 1.0e-159
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALT 60
           MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALT
Sbjct: 1   MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALT 60

Query: 61  FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN 120
           FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN
Sbjct: 61  FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN 120

Query: 121 KRARVDSVWNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQRRQKLSDKTRCLQKLL 180
           KRARVDSVWNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQRRQKLSDKTRCLQKLL
Sbjct: 121 KRARVDSVWNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQRRQKLSDKTRCLQKLL 180

Query: 181 PWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ 240
           PWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ
Sbjct: 181 PWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ 240

Query: 241 LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRHKP 292
           LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRHKP
Sbjct: 241 LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRHKP 291

[Close]

BLAST of Carg19090 vs. NCBI nr
Match: KAG6589186.1 (Transcription factor basic helix-loop-helix 117, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 571.2 bits (1471), Expect = 5.0e-159
Identity = 290/291 (99.66%), Postives = 290/291 (99.66%), Query Frame = 0


Query: 1   MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALT 60
           MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALT
Sbjct: 1   MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALT 60

Query: 61  FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN 120
           FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN
Sbjct: 61  FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN 120

Query: 121 KRARVDSVWNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQRRQKLSDKTRCLQKLL 180
           KRARVDSVWNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQRRQKLSDKTRCLQKLL
Sbjct: 121 KRARVDSVWNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQRRQKLSDKTRCLQKLL 180

Query: 181 PWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ 240
           PWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ
Sbjct: 181 PWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ 240

Query: 241 LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRHKP 292
           LLQVLVNSPVAQTMLCSQSCCVFSAEQ GLIQKIAEKRVLLQQISTFRHKP
Sbjct: 241 LLQVLVNSPVAQTMLCSQSCCVFSAEQSGLIQKIAEKRVLLQQISTFRHKP 291

[Close]

BLAST of Carg19090 vs. NCBI nr
Match: XP_023531446.1 (transcription factor bHLH117-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531447.1 transcription factor bHLH117-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531448.1 transcription factor bHLH117-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531449.1 transcription factor bHLH117-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 560.1 bits (1442), Expect = 1.1e-155
Identity = 285/291 (97.94%), Postives = 289/291 (99.31%), Query Frame = 0


Query: 1   MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALT 60
           MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQN+CPLLLPSLFGGGYISDALT
Sbjct: 1   MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNYCPLLLPSLFGGGYISDALT 60

Query: 61  FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN 120
           FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN
Sbjct: 61  FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN 120

Query: 121 KRARVDSVWNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQRRQKLSDKTRCLQKLL 180
           KRARVDSVWNPLQ+VEPMMRECEVSSSAAVS +VQIPRSALARQRRQKLSDKTRCLQKLL
Sbjct: 121 KRARVDSVWNPLQIVEPMMRECEVSSSAAVSPSVQIPRSALARQRRQKLSDKTRCLQKLL 180

Query: 181 PWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ 240
           PWDKKMDISTMLE AFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ
Sbjct: 181 PWDKKMDISTMLEEAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ 240

Query: 241 LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRHKP 292
           LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFR+KP
Sbjct: 241 LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRYKP 291

[Close]

BLAST of Carg19090 vs. NCBI nr
Match: XP_022930851.1 (transcription factor bHLH117-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 498.0 bits (1281), Expect = 5.3e-137
Identity = 257/291 (88.32%), Postives = 257/291 (88.32%), Query Frame = 0


Query: 1   MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALT 60
           MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALT
Sbjct: 1   MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALT 60

Query: 61  FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN 120
           FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN
Sbjct: 61  FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN 120

Query: 121 KRARVDSVWNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQRRQKLSDKTRCLQKLL 180
           KRARVDSVWNPLQMVEPMMRECE                                  KLL
Sbjct: 121 KRARVDSVWNPLQMVEPMMRECE----------------------------------KLL 180

Query: 181 PWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ 240
           PWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ
Sbjct: 181 PWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ 240

Query: 241 LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRHKP 292
           LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRHKP
Sbjct: 241 LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRHKP 257

[Close]

BLAST of Carg19090 vs. NCBI nr
Match: XP_023531450.1 (transcription factor bHLH117-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 488.8 bits (1257), Expect = 3.2e-134
Identity = 253/291 (86.94%), Postives = 256/291 (87.97%), Query Frame = 0


Query: 1   MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALT 60
           MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQN+CPLLLPSLFGGGYISDALT
Sbjct: 1   MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNYCPLLLPSLFGGGYISDALT 60

Query: 61  FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN 120
           FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN
Sbjct: 61  FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN 120

Query: 121 KRARVDSVWNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQRRQKLSDKTRCLQKLL 180
           KRARVDSVWNPLQ+VEPMMRECE                                  KLL
Sbjct: 121 KRARVDSVWNPLQIVEPMMRECE----------------------------------KLL 180

Query: 181 PWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ 240
           PWDKKMDISTMLE AFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ
Sbjct: 181 PWDKKMDISTMLEEAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ 240

Query: 241 LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRHKP 292
           LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFR+KP
Sbjct: 241 LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRYKP 257

[Close]

BLAST of Carg19090 vs. ExPASy Swiss-Prot
Match: Q9LRJ4 (Transcription factor bHLH117 OS=Arabidopsis thaliana OX=3702 GN=BHLH117 PE=2 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 4.3e-20
Identity = 77/224 (34.38%), Postives = 117/224 (52.23%), Query Frame = 0


Query: 56  SDALTFPDASTSLYPQPSSNFVAESIESSEPMNV----YEQT-AFVFH------ASTSFP 115
           S+A TFPD +       S+  +      SE   +    Y+ T   +FH       +T F 
Sbjct: 25  SNAFTFPDHNLDFSFLDSTLSLLNRHHLSESTRLEQIFYDSTHTQLFHNDDTTTTTTPFL 84

Query: 116 HLPDLRSLGQCSSSFNKRARVDSVWNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQ 175
           HLPDL+S+         +    S+  PL   +        SS+ + S T       +   
Sbjct: 85  HLPDLKSIDAVEEPTTMKL-FPSLSPPLPAAKRQKLNSTSSSTTSGSPTASNDGGIIT-- 144

Query: 176 RRQKLSDKTRCLQKLLPWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNH 235
           +R+K+SDK R L+KL+PW++KM+++  LE + KY+KFLQ+Q+ +L+ MP ES  +T    
Sbjct: 145 KRRKISDKIRSLEKLMPWERKMNLAMTLEESHKYIKFLQSQIASLRWMPLESVYNTAGE- 204

Query: 236 HISGVFGGLERLSRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQL 269
              G    L+ L+R Q+LQVL NSP ++ +L S+  CVFS EQL
Sbjct: 205 --VGETDLLKSLTRQQILQVLANSPGSRNVLSSRGVCVFSYEQL 242

[Close]

BLAST of Carg19090 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 6.4e-08
Identity = 37/107 (34.58%), Postives = 62/107 (57.94%), Query Frame = 0


Query: 107 PDLRSLGQCSSSFNKRARVDSVWNPLQMVE-PMMRECEVSSSAAVSRTVQIPRSALARQR 166
           PD  ++ Q      + A    V   L++VE P  +  ++S+          P++  ARQR
Sbjct: 237 PDAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTD---------PQTVAARQR 296

Query: 167 RQKLSDKTRCLQKLLPWDKKMDISTMLEGAFKYVKFLQAQLLALQSM 213
           R+++S+K R LQ L+P   KMD ++ML+ A  Y+KFL+AQ+ AL+++
Sbjct: 297 RERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENL 334

[Close]

BLAST of Carg19090 vs. ExPASy Swiss-Prot
Match: Q3E7L7 (Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.0e-07
Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 157 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDISTMLEGAFKYVKFLQAQLLALQS 212
           P+S  AR+RR++++D+ + LQ L+P   K+DISTMLE A  YVKFLQ Q+  L S
Sbjct: 142 PQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSS 196

[Close]

BLAST of Carg19090 vs. ExPASy Swiss-Prot
Match: Q9LXD8 (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.0e-07
Identity = 36/104 (34.62%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 109 LRSLGQCSSSFNKRARVDSV-WNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQRRQ 168
           L  LG       K A + SV  +P  + +P  R   +S           P+S  AR RR+
Sbjct: 89  LEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDD---------PQSVAARHRRE 148

Query: 169 KLSDKTRCLQKLLPWDKKMDISTMLEGAFKYVKFLQAQLLALQS 212
           ++S++ R LQ+L+P   KMD ++ML+ A +YVKFL+ Q+  L +
Sbjct: 149 RISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNN 183

[Close]

BLAST of Carg19090 vs. ExPASy Swiss-Prot
Match: Q7XHI9 (Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.2e-07
Identity = 29/55 (52.73%), Postives = 41/55 (74.55%), Query Frame = 0


Query: 157 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDISTMLEGAFKYVKFLQAQLLALQS 212
           P+S  AR+RR++++++ R LQ L+P   K+DISTMLE A +YVKFLQ Q+  L S
Sbjct: 247 PQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSS 301

[Close]

BLAST of Carg19090 vs. ExPASy TrEMBL
Match: A0A6J1EXY4 (transcription factor bHLH117-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437213 PE=4 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 4.8e-160
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALT 60
           MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALT
Sbjct: 1   MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALT 60

Query: 61  FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN 120
           FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN
Sbjct: 61  FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN 120

Query: 121 KRARVDSVWNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQRRQKLSDKTRCLQKLL 180
           KRARVDSVWNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQRRQKLSDKTRCLQKLL
Sbjct: 121 KRARVDSVWNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQRRQKLSDKTRCLQKLL 180

Query: 181 PWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ 240
           PWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ
Sbjct: 181 PWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ 240

Query: 241 LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRHKP 292
           LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRHKP
Sbjct: 241 LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRHKP 291

[Close]

BLAST of Carg19090 vs. ExPASy TrEMBL
Match: A0A6J1ES24 (transcription factor bHLH117-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437213 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.6e-137
Identity = 257/291 (88.32%), Postives = 257/291 (88.32%), Query Frame = 0


Query: 1   MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALT 60
           MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALT
Sbjct: 1   MMVESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALT 60

Query: 61  FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN 120
           FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN
Sbjct: 61  FPDASTSLYPQPSSNFVAESIESSEPMNVYEQTAFVFHASTSFPHLPDLRSLGQCSSSFN 120

Query: 121 KRARVDSVWNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQRRQKLSDKTRCLQKLL 180
           KRARVDSVWNPLQMVEPMMRECE                                  KLL
Sbjct: 121 KRARVDSVWNPLQMVEPMMRECE----------------------------------KLL 180

Query: 181 PWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ 240
           PWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ
Sbjct: 181 PWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNHHISGVFGGLERLSRNQ 240

Query: 241 LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRHKP 292
           LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRHKP
Sbjct: 241 LLQVLVNSPVAQTMLCSQSCCVFSAEQLGLIQKIAEKRVLLQQISTFRHKP 257

[Close]

BLAST of Carg19090 vs. ExPASy TrEMBL
Match: A0A5A7TAD0 (Transcription factor bHLH117 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003960 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 6.0e-110
Identity = 229/324 (70.68%), Postives = 249/324 (76.85%), Query Frame = 0


Query: 3   VESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALTFP 62
           +ESS GDD S++VWDDACFNAMFS VS QSFLA GN         S FGGGYI+DALTFP
Sbjct: 1   MESSPGDDASSSVWDDACFNAMFSDVSFQSFLAAGNH--------SQFGGGYIADALTFP 60

Query: 63  DASTSLYPQPSSNFVAESIES----------SEPMNVYEQT-----AFVFHASTSFPHLP 122
           DA+TS YPQPS+NF AE  +S          SEPM+VYE T     AFV H STSFPHLP
Sbjct: 61  DATTSFYPQPSTNFAAECTDSSDGPFFKLPKSEPMDVYEDTETKEPAFVLHDSTSFPHLP 120

Query: 123 DLRSLGQCSSSFNKRARVDSVWNPLQMVEPMMRECE------------------VSSSAA 182
           DLRSL QCSSSFNKRARVDS+ NPLQMVEPM+R CE                  +++SA 
Sbjct: 121 DLRSLEQCSSSFNKRARVDSMSNPLQMVEPMVRGCEGFQNFFVPYGQYKTSSDLITTSAT 180

Query: 183 VSRTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDISTMLEGAFKYVKFLQAQLLAL 242
            S TVQIPRS  ARQRRQKLSDKTRCLQKLLPWDKKMDI+TMLE A KYVKFLQAQLLAL
Sbjct: 181 ASPTVQIPRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLAL 240

Query: 243 QSMPCESAIST--NSNHHISGVFGGLERLSRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQ 292
           QSMPCESA+S+  +SN +I+GVFGGLERL+RNQLLQVLVNSPVAQTMLCSQSCCVFSAEQ
Sbjct: 241 QSMPCESALSSYNSSNPYITGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQ 300

[Close]

BLAST of Carg19090 vs. ExPASy TrEMBL
Match: A0A1S3C0Y6 (transcription factor bHLH117 OS=Cucumis melo OX=3656 GN=LOC103495566 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.5e-108
Identity = 228/324 (70.37%), Postives = 248/324 (76.54%), Query Frame = 0


Query: 3   VESSAGDDGSTNVWDDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALTFP 62
           +ESS GDD S++VWDDACFNAMFS VS QSFLA GN         S FGGGYI+DALTFP
Sbjct: 1   MESSPGDDASSSVWDDACFNAMFSDVSFQSFLAAGNH--------SQFGGGYIADALTFP 60

Query: 63  DASTSLYPQPSSNFVAESIES----------SEPMNVYEQT-----AFVFHASTSFPHLP 122
           DA+TS YPQPS+NF AE  +S          SEPM+VYE T     AFV H STSFPHLP
Sbjct: 61  DATTSFYPQPSTNFAAECTDSSDGPFFKLPKSEPMDVYEDTETKEPAFVLHDSTSFPHLP 120

Query: 123 DLRSLGQCSSSFNKRARVDSVWNPLQMVEPMMRECE------------------VSSSAA 182
           DLRSL Q SSSFNKRARVDS+ NPLQMVEPM+R CE                  +++SA 
Sbjct: 121 DLRSLEQRSSSFNKRARVDSMSNPLQMVEPMVRGCEGFQNFFVPYGQYKTSSDLITTSAT 180

Query: 183 VSRTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDISTMLEGAFKYVKFLQAQLLAL 242
            S TVQIPRS  ARQRRQKLSDKTRCLQKLLPWDKKMDI+TMLE A KYVKFLQAQLLAL
Sbjct: 181 ASPTVQIPRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLAL 240

Query: 243 QSMPCESAIST--NSNHHISGVFGGLERLSRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQ 292
           QSMPCESA+S+  +SN +I+GVFGGLERL+RNQLLQVLVNSPVAQTMLCSQSCCVFSAEQ
Sbjct: 241 QSMPCESALSSYNSSNPYITGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQ 300

[Close]

BLAST of Carg19090 vs. ExPASy TrEMBL
Match: A0A0A0K6W7 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044910 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.4e-106
Identity = 224/324 (69.14%), Postives = 248/324 (76.54%), Query Frame = 0


Query: 3   VESSAGDDGSTNVW-DDACFNAMFSGVSLQSFLAGGNQNHCPLLLPSLFGGGYISDALTF 62
           +E+S GDD S++VW DDACFNAMFS VS QSFLA GN         S FGGGYI+DALTF
Sbjct: 1   METSPGDDASSSVWDDDACFNAMFSDVSFQSFLAAGNH--------SQFGGGYIADALTF 60

Query: 63  PDASTSLYPQPSSNFVAESIES----------SEPMNVYEQT-----AFVFHASTSFPHL 122
           P+ +TS YPQP++NF AE  +S          SEPM+VYE T     AFV H STSFPHL
Sbjct: 61  PNPTTSFYPQPTTNFAAECTDSSDGPFFKLPKSEPMDVYEDTETKEPAFVLHDSTSFPHL 120

Query: 123 PDLRSLGQCSSSFNKRARVDSVWNPLQMVEPMMRECE-----------------VSSSAA 182
           PDLRSL QCSSS NKRARVDS+ NPLQM+EPM+R CE                 +++SA 
Sbjct: 121 PDLRSLEQCSSSLNKRARVDSMSNPLQMMEPMVRGCEGFQSFFVPYQYKISSDLITASAT 180

Query: 183 VSRTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDISTMLEGAFKYVKFLQAQLLAL 242
            S TVQIPRS  ARQRRQKLSDKTRCLQKLLPWDKKMDI+TMLE A KYVKFLQAQLLAL
Sbjct: 181 ASPTVQIPRSTFARQRRQKLSDKTRCLQKLLPWDKKMDIATMLEEACKYVKFLQAQLLAL 240

Query: 243 QSMPCESAIST--NSNHHISGVFGGLERLSRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQ 292
           QSMPCESAIS+  +SN++I+GVFGGLERL+RNQLLQVLVNSPVAQTMLCSQSCCVFSAEQ
Sbjct: 241 QSMPCESAISSYNSSNNYITGVFGGLERLNRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQ 300

[Close]

BLAST of Carg19090 vs. TAIR 10
Match: AT3G22100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 3.0e-21
Identity = 77/224 (34.38%), Postives = 117/224 (52.23%), Query Frame = 0


Query: 56  SDALTFPDASTSLYPQPSSNFVAESIESSEPMNV----YEQT-AFVFH------ASTSFP 115
           S+A TFPD +       S+  +      SE   +    Y+ T   +FH       +T F 
Sbjct: 25  SNAFTFPDHNLDFSFLDSTLSLLNRHHLSESTRLEQIFYDSTHTQLFHNDDTTTTTTPFL 84

Query: 116 HLPDLRSLGQCSSSFNKRARVDSVWNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQ 175
           HLPDL+S+         +    S+  PL   +        SS+ + S T       +   
Sbjct: 85  HLPDLKSIDAVEEPTTMKL-FPSLSPPLPAAKRQKLNSTSSSTTSGSPTASNDGGIIT-- 144

Query: 176 RRQKLSDKTRCLQKLLPWDKKMDISTMLEGAFKYVKFLQAQLLALQSMPCESAISTNSNH 235
           +R+K+SDK R L+KL+PW++KM+++  LE + KY+KFLQ+Q+ +L+ MP ES  +T    
Sbjct: 145 KRRKISDKIRSLEKLMPWERKMNLAMTLEESHKYIKFLQSQIASLRWMPLESVYNTAGE- 204

Query: 236 HISGVFGGLERLSRNQLLQVLVNSPVAQTMLCSQSCCVFSAEQL 269
              G    L+ L+R Q+LQVL NSP ++ +L S+  CVFS EQL
Sbjct: 205 --VGETDLLKSLTRQQILQVLANSPGSRNVLSSRGVCVFSYEQL 242

[Close]

BLAST of Carg19090 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 4.5e-09
Identity = 37/107 (34.58%), Postives = 62/107 (57.94%), Query Frame = 0


Query: 107 PDLRSLGQCSSSFNKRARVDSVWNPLQMVE-PMMRECEVSSSAAVSRTVQIPRSALARQR 166
           PD  ++ Q      + A    V   L++VE P  +  ++S+          P++  ARQR
Sbjct: 237 PDAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTD---------PQTVAARQR 296

Query: 167 RQKLSDKTRCLQKLLPWDKKMDISTMLEGAFKYVKFLQAQLLALQSM 213
           R+++S+K R LQ L+P   KMD ++ML+ A  Y+KFL+AQ+ AL+++
Sbjct: 297 RERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENL 334

[Close]

BLAST of Carg19090 vs. TAIR 10
Match: AT5G43175.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 56.2 bits (134), Expect = 5.0e-08
Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 157 PRSALARQRRQKLSDKTRCLQKLLPWDKKMDISTMLEGAFKYVKFLQAQLLALQS 212
           P+S  AR+RR++++D+ + LQ L+P   K+DISTMLE A  YVKFLQ Q+  L S
Sbjct: 142 PQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSS 196

[Close]

BLAST of Carg19090 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 56.2 bits (134), Expect = 5.0e-08
Identity = 36/104 (34.62%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 109 LRSLGQCSSSFNKRARVDSV-WNPLQMVEPMMRECEVSSSAAVSRTVQIPRSALARQRRQ 168
           L  LG       K A + SV  +P  + +P  R   +S           P+S  AR RR+
Sbjct: 89  LEELGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDD---------PQSVAARHRRE 148

Query: 169 KLSDKTRCLQKLLPWDKKMDISTMLEGAFKYVKFLQAQLLALQS 212
           ++S++ R LQ+L+P   KMD ++ML+ A +YVKFL+ Q+  L +
Sbjct: 149 RISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLNN 183

[Close]

BLAST of Carg19090 vs. TAIR 10
Match: AT1G27740.1 (root hair defective 6-like 4 )

HSP 1 Score: 55.8 bits (133), Expect = 6.5e-08
Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 149 AVSRTVQIPRSALARQRRQKLSDKTRCLQKLLPWDKKMDISTMLEGAFKYVKFLQAQLLA 208
           A   T   P+S  AR+RR+K++++ + LQ L+P   K+DISTMLE A  YVKFLQ Q+  
Sbjct: 169 ATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKL 228

Query: 209 LQS 212
           L S
Sbjct: 229 LSS 231

The following BLAST results are available for this feature:

BLAST of Carg19090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930846.1	1.0e-159	100.00	transcription factor bHLH117-like isoform X1 [Cucurbita moschata] >XP_022930847....	[more]
KAG6589186.1	5.0e-159	99.66	Transcription factor basic helix-loop-helix 117, partial [Cucurbita argyrosperma...	[more]
XP_023531446.1	1.1e-155	97.94	transcription factor bHLH117-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_02...	[more]
XP_022930851.1	5.3e-137	88.32	transcription factor bHLH117-like isoform X2 [Cucurbita moschata]	[more]
XP_023531450.1	3.2e-134	86.94	transcription factor bHLH117-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg19090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRJ4	4.3e-20	34.38	Transcription factor bHLH117 OS=Arabidopsis thaliana OX=3702 GN=BHLH117 PE=2 SV=...	[more]
Q8S3D2	6.4e-08	34.58	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]
Q3E7L7	7.0e-07	52.73	Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=...	[more]
Q9LXD8	7.0e-07	34.62	Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1	[more]
Q7XHI9	9.2e-07	52.73	Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1	[more]

BLAST of Carg19090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EXY4	4.8e-160	100.00	transcription factor bHLH117-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1ES24	2.6e-137	88.32	transcription factor bHLH117-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A5A7TAD0	6.0e-110	70.68	Transcription factor bHLH117 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C0Y6	1.5e-108	70.37	transcription factor bHLH117 OS=Cucumis melo OX=3656 GN=LOC103495566 PE=4 SV=1	[more]
A0A0A0K6W7	2.4e-106	69.14	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044910 PE=4 S...	[more]

BLAST of Carg19090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22100.1	3.0e-21	34.38	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	4.5e-09	34.58	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G43175.1	5.0e-08	52.73	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	5.0e-08	34.62	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G27740.1	6.5e-08	49.21	root hair defective 6-like 4	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 159..208 e-value: 3.9E-7 score: 39.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 153..202 score: 12.137765
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 155..223 e-value: 1.6E-7 score: 33.3
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 156..211
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 63..288
None	No IPR available	PANTHER	PTHR45914:SF24	TRANSCRIPTION FACTOR BHLH117	coord: 63..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19090-RA	Carg19090-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity