Carg19081 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19081
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger CCCH domain-containing protein 40-like isoform X1
Location	Carg_Chr11: 12271855 .. 12279737 (+)
RNA-Seq Expression	Carg19081
Synteny	Carg19081

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGGGAATGAAATGAAACCCTGAGAATCATTTTCATCACGGCGTTCGTCTCAGCCGTCGCGTTTTGCTTTGGATAGCTCAGGGAGTTCTGCTATCGCGATTCACCGCCGTCGAATATGTTCTATTGGACTACTGTTTCCATATTTTCTGATTCTTTGTAATCTATAGAAGCTGATTTTAGCGGCTGAACTACTTCGATTCGGTTCTACATCTATTATTTCTAATTCGTCGCTGCGGAGCGGATACAGCCGGCGATTGCTGCGGCTTTGACTATATACTTATTTTCAGTTTCTGTTTATGTTCATCCATGGTGGTTGGGAGCAAACTCTTCAAAACGAAGTTATGCGTTCTTTACCAGAAAGGCCGCTGTTCTCGGCCAAGTTGCTCGTTCGCGCATGGAACCGCTGAACTCAGGCGATTTGCTGGTGCTCATGACGGTAATTTGCCCCTTATATCTTTAATCTTTCAATGTGTTCTCTAATTGTGGGATTTAGGTTGATGAAATGGAAGTTTATAGTAGTTAGAGGCTACATGTGTCTGCAAGTTTGGTTGTATGTCGCTGATTTTACATTCAACGTTAACAGTGGTATAGTGGTGAGATGATGTTGTTGAGTTTAGTTGTTTGGGTATGAGTTTGATTCTGTGTTTAATCCCTGGAGAGGGGAATAGAGTAGTTTAGGATTAATGGTGCTTCTTTCTTCCATTATGATCGTCTTGTTATAATTAATGTTGAGGGCTTGATTTGCAGCATTCTTTCTTTTAATCCTATTAATGTCTGGCCTTCATATTCTTTTTTCTTTCTTTCTGTTCCTGTTAAGTACCATTTTCTAATGTGTATGTTTTTTTCTTAATTATACGTTCATATTTCCCGATTAGAGGCGCTTCTTTAGATTAATAAGTAGGTTCTTTCAGTTAATGATCTGAAAGTATTCTGTCTGCTGTGTATTTATAGCTATACGAACACAATCTTCCTCATCTATGGCTCTATGGTTTGGGTATCTTGTTGCTTGCTATCTTCCATATTTTAATTGGTTCAGCACGAGTTGTCACATGAGATTCCACGCCTCTACCAATGGATATTTATTATAGAAGGAAGTTGAATGATTCCGAATAAAAATTTCTTCAAGTTGCTGGCCAGTGAAGTGCTAGTAAAAAATAATCATCGGGATCAGAGTTTTTTTCATTGGAATGGATATGGTGGGTTTTTCTCTATAGAGCTGCCTGTTATATATTACTGGAGATGTTTATGGCCCTTGTGGTGCATCAACTAAACCAGAAAGTACTTGTTGAGGAGTATAATTGTTTTCCCTAATTTATATATCTCCCACGGCTTTTGTTAATTATTCCATTATGGTTTTCTCGGTTATGCTACCGTTGTTCACGGGGCTTCATTTATCTTAGAAGAGGTTCTTTGTTGAAGAGTATAATTGTTTTCCCTAATTTATATATCTCCCACGGCTTTTGTTAATTATTCCGTTATGGTTTTCTCGGTTATGCTACCGTTGTTCACGGGGCTTCATTTATCTTAGAAGAGGTTCTTCATTGGTTTATGCCTCCTGAGTATGCCAAATGGACATCTCGTTGGAGTGATGCAATTTTTATGGGAGTATTGCATGAAGAATCGAAATTGAATTGATGTCATTGGAATGTACTTGTATCATTATGTGGAATCCCGGAGATATCTCCCATTTTGGATAAAAGTTATGTGAACTTATTGTTCATCGAGGACACAGGAGTTAATCCTTCGTTCTATTCTGAATATGAAGGTTATCCAAAGGGTTTTATCCCAGGCATGGATTTTTCTATATATTTTCATTATTTCTATGGCCCTTTTGGAACTGGCATGGCGGCACTATTACTGTTCCTTATTTTGTTTCTCATCTTTTCCATGTAATGGTAAGATAATCCTTGTAAGGACTTCATTGCTTCATTAATTTTTTTAGAAAGAATATCTGGCGATAACTGAACTTGTTAAAATAAAATTTCCCCATCTTTGCAGGTAGACGGGAATATAGAGGAAATGATTTAAGGCATAAGCTTGACAGCAGGCATTCTCCTTTGCAGGAAAGGGATTCCAGGGGGCGACATGGACCTCGTGGTATTAAAGTCATATGTTTTTCTTCGCGCGCGCGTGTGTGTGTCTCCTTCCCCCTCCCCCAAGTAGTCTTTTCTCGATGTCACCTATGCTGCGATCCCTAACTTATATGATGCTTTCTTTTTACATTTTCTAATTAAGGAATGTAGGAAGCATGATTCTTAACATACAGATGCAGTTATATTTTAAGAGAATATGTGGACTGCACAATTCTTTTACATGTACTAATAGCAAAGTTCCTTTCTGATTTCTCTCATGTGGAATTGGATTGCAGATTATAGCTCATCCTGGTCACTTGAACGACAAAGGTAAACTGCGACAATCTTTCTTTTAAAAAAATTGTATTCTCATGTTATTTTATCACTGGAGGCCGTGCTGGCTCTCAATTTATGATCCCCATCTTATATGTTTATGTTGTAGCAGTGATACTTGATTGCCTTTTACTATTAGATTGATACTAAGAGTGTGAAAGATAATAAGAAAATTGATCTGCAGTCAGATTATATTATCTAAGAATTCAAGTGAAGGAAAGGTAGGAATGGATCCTGTGATGGAAATATCTATTGAGGGATCAAATTTTATTTGAAGCCCTCACGAGGAATGTTTATGATAATTTTCTCATGGGAAAATAGCCATGTATATTGACGACTTCCTTCTTACTTGAGTATTTCCAGTCCTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTGTTAAGAGAGTACTTCCAGTGCCTGATTCCATTACTTCCTGAGCCATGCTTGAACTTTACAATTTCTTGTACGTCTTGGTTTGAAGATCTTATGTGGCATATTAGTATGGCCTGATTTCATTCTTCTACACCCAATTTTTTTTTTCATGAGTACTGGCACAAAAAATTGCTTCTTAGTAATTTTCTGGTGAATATCTTGAAATGGTACACATTCTTGTCTCAGTGATCGTAAAAGAAGGAAAAAAGAATATGGGGATTCCCGTAATGATTATTCTGGGAATTTGAGGATTTCAGATAGGAGTGAAGAACGAGATAGAGAAGGGAAAATCTCATCTGCTTCTAGAGACACTCTTGAGGGGCAGGTAAATAAAACGATGGTTTCTAACTTTTATCTTCTATTTAAGAAACAGTTACGCTCTGGAAATCTTGTTTGATCGTCTTTGAATCACACAGTTAAACAAGATGCAGGCAGATATTGAGATGGCTGAGCACCACAAACACCAAGCTGAGGTAAGTATTGTCTCTTTATTTTCTGATTCCTGCCTCTAATTCTCTGCAGGCAATAGGCAATAGGCAATACATATTTTCTTTTCTCTATCCATGCAATAGGCAATACAATCTAACTCTTATTAAAAATTTCCTTTATGTATTTTCCCAAATGTATTCTTGGGAGTGGTTTGAGATGTTTGGTCCCTTGTTAGGTTCTATGTTTCTATCTAGGCTTCAGTGATGTGACCTTTTTGTAATTACCCTCTAGGTCTTATTTTACTGGATTGGAGTCCGTCCTTGTAGTTTGGCTCCCTTGTGTGGGCTTTATTTTTGTATTTCTTGTATTCTTTTATTTTTTCCTCAATGAAAATTCTTTTATTCCTAAAAAAAAGAAAAGAAAAGGTCCACTCATTTCTAATGAAGTTTTAAGCTTCAGTTTTTGTTTTTATTGGACAACAAATTGGCATGAGAGCAAATTAATAGGGATTGGATCCAAAACTTAGGCAAGAGTAGCTGAAGTTTATGAGACGGTGAAAGGGCGGAAGACAACAAATTGTTTTTTTTTTTCTTTTGTAACAAGAAACAGAACTTTTAATTGATTGAATGAGAAGATTAATGCTCATAAGACGTGAACTCCAAAAGTTCTCATTGTAATTAGCTTTTGGTGGACTAATGCTCAAGAGCCCAAAAGCTAACTACAAAAAAGGCTCCAATTTGTAAGGACAAATCCAAGACCATAATTACAAAAAGGTCGACTGATACCCACCTGAACCTCCTCACTCGACTTCTCTTCGTCTCTAAAAATTCTATTAGGAGAATGCAAGAACACCTTCTTCTAACACCAAAAGAACTCATCCACCAACCCCACATGAAGTTAGCAAACTGGCCCTCTCACAGTAAATGAGACCAATGCTCTTCATTCCTCCTACAGAGAAGGCACCATTGCGGATACAACATTGAGGTAGAGTGCCTTTAGATGTGATTTTGAGTGTTAACTTCCCCAAGTAAAACTTGGAACGCTAAAAAGTTCACCTTCTTAGGAATATTAGCCTTCAAGAAAGAAGCAAAAGTAGAAGCCTCAGGAGCAGTTAACTAGGCAAGTGAGAAAAACAAAGAATGAAAAAAGGAATGACTAGAGAAAACACCTAAAAGGATTGGGGTTTAGACCCTAGTATCTCTCCTTCCCAAAATAATAACCTATTCTCAAAGGGTATAAAGAAGGCCACCTCATCAATTGCCTCCATACTAATTAGAGAATGATAAAACCCTGAGGAGATCTAACAAGAGAGATTATGAGAAGACAACACTAATGACATTGAATGCAATCTCTTATTCAAAAGGAAATAGAGACGAGGAAAAAGGATGCACAAAGATCCTCTAAAAAAAAAATAAACTCTTGAAGCTTTCTCACATTGCATTGACGTTTGAAACTTACAAAAGGGATGCATTATCCATGATTTTTACAAAAAGTCCTTCCCAATTTACAAAGAGGGAGGTACGACTATAGGAAGCAAAGATATTAGACAATTTACACCAAGATATAATTTGGTAAACAATATTGTTGAAGAGTTTTGTATAAGTTTGTGTCTTTTCTGTGAATACTCTTTGATTTCCTTCTTTCCACATATTCCAAAAGAAACCAATGATGAGGCTTTTCCATAGTATGGTTTTTGTATTCTTGAAGGGGTGGTACGTTAAGGCCATGTCCAATAAATTCTTTACTGTCCTAGGAAAAGTGAGATGCCATCCGAAGATATTAAGAATTTTTGTCCAAAAATTTTGAGCTTATGTGCCATGCATAAATAAATGCATTCGTTATTCGTTTTCTTTCTTACCTAATAGGCACAAATTTGGAAATAGAGTCATGTTTTTAAAGATTTTCACTTGTAATAATGACTTTATGCGCTATTTCCCAAAGGAAATACTTTAACTTTTTAAGATGATTTCCTTTCCATATTACTTTTGCTAGCACAAGATTTATCGCTTCTACTTTTTTTCCCTATCTCCGTCATCAAAGATTTTGTAGAGAAGACTTCGTCAGTGATGGGAAGTCATGTCAATGAGTCTGCTTCGTTAAACAATAGAACTGGGGCAAGCTTGAGGCTTAATTTGGCTCATTTTGTAGTGTCGTTATCCTTTAGGTTTTTACCAAACTTCAGGTCCCAAAAATGGTTGACATTATTCCATGTTTCTTTCATCATTCCATGTGGTGGTTAGTGTTGATACCAGCTTATCGCTTTGGTCGGCCTGTAGGTGACTGAGTAAGCTTGTTGGTCAGTTGTGGGGTTGAAATAATCAGCTTAGGGTCGGGGATTTGTGGGGTAAGTAGGGTATGGGAACAGTTTTGACTGAACTAAGCATCTTGAATGCATAATAAATATTTGTTTGTATTTTCCTCTTTCACAGTAGTTTAGATTCATTCCTGACGGAGATTATTTTAATGTCTACTAGTTGCAAACTTTGCAACCTGGTTGACCCAAAATCTGCCACTAGAGTGCGTAGTGGTCTCTTAATTCTTATCATATGGTTGGAACTGGAACTCCCTTAACTGGGAAGGTGCTTTTATGCTGTTTCAAGGGTCATATGCTATTGATTGGTATTTTGACTGAGCAATATTTTCAAGATAATGTATATTTCATTTGCTCGGTGAAATGATCTTATAAATATATATTGAAAATATTAGCAAATTGTACTTTATTTTTGAAGGTCTATCTGGATGAGAGGATCCAAGAAGTGGATAGTTTAACTTCTAGAATTCAGGAGCTAGAATCCCAATTATATAAAGAGAGGGAGGATTCTAGAAGGTACTCATAATCGTCTTTTAAGTACACGTTGACATGTTTCCTGCTGAAAGTGGACACCTACCTCTTATTCCTATTTTTCTTGGATCTTTAATATTCAGGATCAAATCAAAAATCAAGAAATTTGTCAAAGCACATAATCGTTACTCAAGGATACAAGATGAATTGAAGCGGCAAGTATACTTGTCCAATTCTTTTGGTTGCACTTTCTAATGCTTATGACTTTCTGAAAATTATGATAACTTTTCTGAACTTGTAGTTCGCAAGTCCGACTTCAACAGTTGGGGGATCAGCTGGGGTCGGATGTTAATAAAATTGGTGCCAATGAAGAAGACTCGAGCATTAATATTGTGAGCGATGGAGAGGACCCTGGTTTTCATGCAGTTAGCCCTCTTCATGACCTGCAAAAAGACAATTCTGCAAGCAAGAAGAAGCATATTGTTCAAGATATTGCGGGAAACTCAAAACGAGGTGCCTTTTGAGAACTTTCTTTACATTGATGTGTCATTTTAAAAAAAAATTCTTTTATTTGGTTTGAAATCTCTTAATATGCCTTCAGCCCTAGTGGGCTGTGATAATTTGTAATTATGATGTTTTTCGTCTTGGACCTTTATTTCCTTCATACTTGGAATAAAATTTGTGCATGCTACATTAGCTGATTTAAACAAAGGAAGTAAAGAGGCAGTGGGCAGATTGAGAAGGTTCTCTCGGTGGAATGCCCATCCTTCTCAATCGGTATATAGCAAAATTGAGGCGGTTGGCAATGAAGTCAATGATTTGATACCTACAGCAAATGAAAGCAAGCAGAAAAGAGGAAGGACATCTACTACTGTTTCTTCTGCGGACAAGGTGACTTTGATATTTTTATATTCAATTTTTTTTGTTTGTACAATGTACAACGTGCTGTGCGTTTGAGGTTTGGATGTCTGATTTGTTATCGACATATGGAACACGAAGCCTGTAGGTTATGGCAAGCATGAAGTGTGCTACTATCTATCTATATAATTCGTCCTTTCGTAGTTCTTGTTGTTTTCAGGACCTAGGATAACATTCTCCCTCTGTCTTGCAAGATCAATATGAAGCCTTTCCTTATATGCTTTGTAAATGACATCGTTAAATTCCTTTTACGTCTATGTACTCAATTTCTCAACTCAAATCTGCGCAGGTTAGGGGTCTGGAATCAGGTGTTGTTGTGCCATTAACCAGCATGGCTGCCCATGCAGTTGATGAAGAAGTTGATATTGAATTGGAAATCAACAGTAAAGTGAACGAAACGAGGGAAAATACTAAGGAAGCTTCGTTCGGTAGCCTGCCCTTTCCGCCCCCTCCACCTCCAATCCGTGAAATTAACCATTCAAAGGTTAGCAAGTTCTCTGAATTTCACCACTTTCACTTTTTTCGTTTAATCCATATATATTAGAGAAGGGAATGAGTGCCAGCGAGGACGCTCGCCCTTGAAGGGAGGTGGATTGTGAGATCCTACATCGGTTGGGGAGGAGAACGAAGCAGAGTGTGGAAACCTTTTTCTATCAGACACATTTTAAAAACTTTGAGGGAAAGCCCCGCTAGCGGTGGGCTTGAGTTGTTACCGTAGAAAGTCACGAGTGTTATTCAGTATGGTTTTATTTCTTTAACAAAGAATAAAACTATTGTCACCTCTTACTTGTAGCATCTAACATAATATTTGATTTGCAGTATGAAAGTGAAGATCAAAATGTAGATGTGGTGGCGCTCGATGACGAAAGGGCACGCTTGGACAATGCCTAA

mRNA sequence

CGGGGAATGAAATGAAACCCTGAGAATCATTTTCATCACGGCGTTCGTCTCAGCCGTCGCGTTTTGCTTTGGATAGCTCAGGGAGTTCTGCTATCGCGATTCACCGCCGTCGAATATGTTCTATTGGACTACTGTTTCCATATTTTCTGATTCTTTGTAATCTATAGAAGCTGATTTTAGCGGCTGAACTACTTCGATTCGGTTCTACATCTATTATTTCTAATTCGTCGCTGCGGAGCGGATACAGCCGGCGATTGCTGCGGCTTTGACTATATACTTATTTTCAGTTTCTGTTTATGTTCATCCATGGTGGTTGGGAGCAAACTCTTCAAAACGAAGTTATGCGTTCTTTACCAGAAAGGCCGCTGTTCTCGGCCAAGTTGCTCGTTCGCGCATGGAACCGCTGAACTCAGGCGATTTGCTGGTGCTCATGACGGCATGGATTTTTCTATATATTTTCATTATTTCTATGGCCCTTTTGGAACTGGCATGGCGGCACTATTACTGTTCCTTATTTTGTTTCTCATCTTTTCCATGTAATGGTAGACGGGAATATAGAGGAAATGATTTAAGGCATAAGCTTGACAGCAGGCATTCTCCTTTGCAGGAAAGGGATTCCAGGGGGCGACATGGACCTCGTGATTATAGCTCATCCTGGTCACTTGAACGACAAAGTGATCGTAAAAGAAGGAAAAAAGAATATGGGGATTCCCGTAATGATTATTCTGGGAATTTGAGGATTTCAGATAGGAGTGAAGAACGAGATAGAGAAGGGAAAATCTCATCTGCTTCTAGAGACACTCTTGAGGGGCAGTTAAACAAGATGCAGGCAGATATTGAGATGGCTGAGCACCACAAACACCAAGCTGAGGTCTATCTGGATGAGAGGATCCAAGAAGTGGATAGTTTAACTTCTAGAATTCAGGAGCTAGAATCCCAATTATATAAAGAGAGGGAGGATTCTAGAAGGATCAAATCAAAAATCAAGAAATTTGTCAAAGCACATAATCGTTACTCAAGGATACAAGATGAATTGAAGCGGCAAGTATACTTTTCGCAAGTCCGACTTCAACAGTTGGGGGATCAGCTGGGGTCGGATGTTAATAAAATTGGTGCCAATGAAGAAGACTCGAGCATTAATATTGTGAGCGATGGAGAGGACCCTGGTTTTCATGCAGTTAGCCCTCTTCATGACCTGCAAAAAGACAATTCTGCAAGCAAGAAGAAGCATATTGTTCAAGATATTGCGGGAAACTCAAAACGAGCTGATTTAAACAAAGGAAGTAAAGAGGCAGTGGGCAGATTGAGAAGGTTCTCTCGGTGGAATGCCCATCCTTCTCAATCGGTATATAGCAAAATTGAGGCGGTTGGCAATGAAGTCAATGATTTGATACCTACAGCAAATGAAAGCAAGCAGAAAAGAGGAAGGACATCTACTACTGTTTCTTCTGCGGACAAGGTTAGGGGTCTGGAATCAGGTGTTGTTGTGCCATTAACCAGCATGGCTGCCCATGCAGTTGATGAAGAAGTTGATATTGAATTGGAAATCAACAGTAAATATGAAAGTGAAGATCAAAATGTAGATGTGGTGGCGCTCGATGACGAAAGGGCACGCTTGGACAATGCCTAA

Coding sequence (CDS)

ATGGAACCGCTGAACTCAGGCGATTTGCTGGTGCTCATGACGGCATGGATTTTTCTATATATTTTCATTATTTCTATGGCCCTTTTGGAACTGGCATGGCGGCACTATTACTGTTCCTTATTTTGTTTCTCATCTTTTCCATGTAATGGTAGACGGGAATATAGAGGAAATGATTTAAGGCATAAGCTTGACAGCAGGCATTCTCCTTTGCAGGAAAGGGATTCCAGGGGGCGACATGGACCTCGTGATTATAGCTCATCCTGGTCACTTGAACGACAAAGTGATCGTAAAAGAAGGAAAAAAGAATATGGGGATTCCCGTAATGATTATTCTGGGAATTTGAGGATTTCAGATAGGAGTGAAGAACGAGATAGAGAAGGGAAAATCTCATCTGCTTCTAGAGACACTCTTGAGGGGCAGTTAAACAAGATGCAGGCAGATATTGAGATGGCTGAGCACCACAAACACCAAGCTGAGGTCTATCTGGATGAGAGGATCCAAGAAGTGGATAGTTTAACTTCTAGAATTCAGGAGCTAGAATCCCAATTATATAAAGAGAGGGAGGATTCTAGAAGGATCAAATCAAAAATCAAGAAATTTGTCAAAGCACATAATCGTTACTCAAGGATACAAGATGAATTGAAGCGGCAAGTATACTTTTCGCAAGTCCGACTTCAACAGTTGGGGGATCAGCTGGGGTCGGATGTTAATAAAATTGGTGCCAATGAAGAAGACTCGAGCATTAATATTGTGAGCGATGGAGAGGACCCTGGTTTTCATGCAGTTAGCCCTCTTCATGACCTGCAAAAAGACAATTCTGCAAGCAAGAAGAAGCATATTGTTCAAGATATTGCGGGAAACTCAAAACGAGCTGATTTAAACAAAGGAAGTAAAGAGGCAGTGGGCAGATTGAGAAGGTTCTCTCGGTGGAATGCCCATCCTTCTCAATCGGTATATAGCAAAATTGAGGCGGTTGGCAATGAAGTCAATGATTTGATACCTACAGCAAATGAAAGCAAGCAGAAAAGAGGAAGGACATCTACTACTGTTTCTTCTGCGGACAAGGTTAGGGGTCTGGAATCAGGTGTTGTTGTGCCATTAACCAGCATGGCTGCCCATGCAGTTGATGAAGAAGTTGATATTGAATTGGAAATCAACAGTAAATATGAAAGTGAAGATCAAAATGTAGATGTGGTGGCGCTCGATGACGAAAGGGCACGCTTGGACAATGCCTAA

Protein sequence

MEPLNSGDLLVLMTAWIFLYIFIISMALLELAWRHYYCSLFCFSSFPCNGRREYRGNDLRHKLDSRHSPLQERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSGNLRISDRSEERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKRQVYFSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAGNSKRADLNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTVSSADKVRGLESGVVVPLTSMAAHAVDEEVDIELEINSKYESEDQNVDVVALDDERARLDNA

Homology

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BLAST of Carg19081 vs. NCBI nr
Match: KAG7022878.1 (Zinc finger CCCH domain-containing protein 13 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 777.3 bits (2006), Expect = 6.4e-221
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0


Query: 1   MEPLNSGDLLVLMTAWIFLYIFIISMALLELAWRHYYCSLFCFSSFPCNGRREYRGNDLR 60
           MEPLNSGDLLVLMTAWIFLYIFIISMALLELAWRHYYCSLFCFSSFPCNGRREYRGNDLR
Sbjct: 1   MEPLNSGDLLVLMTAWIFLYIFIISMALLELAWRHYYCSLFCFSSFPCNGRREYRGNDLR 60

Query: 61  HKLDSRHSPLQERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSGNLRISDRS 120
           HKLDSRHSPLQERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSGNLRISDRS
Sbjct: 61  HKLDSRHSPLQERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSGNLRISDRS 120

Query: 121 EERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELE 180
           EERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELE
Sbjct: 121 EERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELE 180

Query: 181 SQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKRQVYFSQVRLQQLGDQLGSDVNKIG 240
           SQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKRQVYFSQVRLQQLGDQLGSDVNKIG
Sbjct: 181 SQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKRQVYFSQVRLQQLGDQLGSDVNKIG 240

Query: 241 ANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAGNSKRADLNKGSKEA 300
           ANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAGNSKRADLNKGSKEA
Sbjct: 241 ANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAGNSKRADLNKGSKEA 300

Query: 301 VGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTVSSADKVRGLE 360
           VGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTVSSADKVRGLE
Sbjct: 301 VGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTVSSADKVRGLE 360

Query: 361 SGVVVPLTSMAAHAVDEEVDIELEINSKYESEDQNVDVVALDDERARLDNA 412
           SGVVVPLTSMAAHAVDEEVDIELEINSKYESEDQNVDVVALDDERARLDNA
Sbjct: 361 SGVVVPLTSMAAHAVDEEVDIELEINSKYESEDQNVDVVALDDERARLDNA 411

[Close]

BLAST of Carg19081 vs. NCBI nr
Match: XP_022930758.1 (zinc finger CCCH domain-containing protein 40-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 721.8 bits (1862), Expect = 3.2e-204
Identity = 395/433 (91.22%), Postives = 395/433 (91.22%), Query Frame = 0


Query: 11  VLMTAWIFLYIFIISMALLELAWRHYYCSLFCFSSFPCNGRREYRGNDLRHKLDSRHSPL 70
           VL  AWIFLYIFIISMALLELAWRHYYCSLFCFSSFPCNGRREYRGNDLRHKLDSRHSPL
Sbjct: 7   VLSQAWIFLYIFIISMALLELAWRHYYCSLFCFSSFPCNGRREYRGNDLRHKLDSRHSPL 66

Query: 71  QERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSGNLRISDRSEERDREGKIS 130
           QERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSGNLRISDRSEERDREGKIS
Sbjct: 67  QERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSGNLRISDRSEERDREGKIS 126

Query: 131 SASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELESQLYKEREDS 190
           SASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELESQLYKEREDS
Sbjct: 127 SASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELESQLYKEREDS 186

Query: 191 RRIKSKIKKFVKAHNRYSRIQDELKRQVYFSQVRLQQLGDQLGSDVNKIGANEEDSSINI 250
           RRIKSKIKKFVKAHNRYSRIQDELKR    SQVRLQQLGDQLGSDVNKIGANEEDSSINI
Sbjct: 187 RRIKSKIKKFVKAHNRYSRIQDELKR----SQVRLQQLGDQLGSDVNKIGANEEDSSINI 246

Query: 251 VSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAGNSKRADLNKGSKEAVGRLRRFSRW 310
           VSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAGNSKRADLNKGSKEAVGRLRRFSRW
Sbjct: 247 VSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAGNSKRADLNKGSKEAVGRLRRFSRW 306

Query: 311 NAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTVSSADKVRGLESGVVVPLTSM 370
           NAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTVSSADKVRGLESGVVVPLTSM
Sbjct: 307 NAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTVSSADKVRGLESGVVVPLTSM 366

Query: 371 AAHAVDEEVDIELEIN--------------------------------SKYESEDQNVDV 412
           AAHAVDEEVDIELEIN                                SKYESEDQNVDV
Sbjct: 367 AAHAVDEEVDIELEINSKVNETRENTKEASFGSLPFPPPPPPIREINHSKYESEDQNVDV 426

[Close]

BLAST of Carg19081 vs. NCBI nr
Match: XP_023530198.1 (zinc finger CCCH domain-containing protein 13-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 717.2 bits (1850), Expect = 7.9e-203
Identity = 396/451 (87.80%), Postives = 402/451 (89.14%), Query Frame = 0


Query: 1   MEPLNSGDLLVLMT--------AWIFLYIFIISMALLELAWRHYYCSLFCFSSFPCNGRR 60
           MEPLNSGDLLVL T        AWIFLY+FIISMALLELAWRHYYCSLFCFSSFPCNGRR
Sbjct: 1   MEPLNSGDLLVLTTVIQRVLSQAWIFLYLFIISMALLELAWRHYYCSLFCFSSFPCNGRR 60

Query: 61  EYRGNDLRHKLDSRHSPLQERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSG 120
           EYRGNDLRHKLDSRHSPLQERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSG
Sbjct: 61  EYRGNDLRHKLDSRHSPLQERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSG 120

Query: 121 NLRISDRSEERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSL 180
           NLRISDRSEERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSL
Sbjct: 121 NLRISDRSEERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSL 180

Query: 181 TSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKRQVYFSQVRLQQLGDQL 240
           TSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKR    SQVRL+QLGDQL
Sbjct: 181 TSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKR----SQVRLEQLGDQL 240

Query: 241 GSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAGNSKRAD 300
           GSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIA NSKRAD
Sbjct: 241 GSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAENSKRAD 300

Query: 301 LNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTVSS 360
           LNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVN LIPTAN+SKQKRGRTST VSS
Sbjct: 301 LNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVNALIPTANDSKQKRGRTSTAVSS 360

Query: 361 ADKVRGLESGVVVPLTSMAAHAVDEEVDIELEIN-------------------------- 412
           ADKVRGLESG VVPLTSMAAHAVDEEVDIEL++N                          
Sbjct: 361 ADKVRGLESG-VVPLTSMAAHAVDEEVDIELDVNNKVNETRENTKEASFGSLPFPPPPPP 420

[Close]

BLAST of Carg19081 vs. NCBI nr
Match: XP_023530199.1 (zinc finger CCCH domain-containing protein 13-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 708.4 bits (1827), Expect = 3.7e-200
Identity = 394/451 (87.36%), Postives = 400/451 (88.69%), Query Frame = 0


Query: 1   MEPLNSGDLLVLMT--------AWIFLYIFIISMALLELAWRHYYCSLFCFSSFPCNGRR 60
           MEPLNSGDLLVL T        AWIFLY+FIISMALLELAWRHYYCSLFCFSSFPCNGRR
Sbjct: 1   MEPLNSGDLLVLTTVIQRVLSQAWIFLYLFIISMALLELAWRHYYCSLFCFSSFPCNGRR 60

Query: 61  EYRGNDLRHKLDSRHSPLQERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSG 120
           EYRGNDLRHKLDSRHSPLQERDSRGRHGP  YSSSWSLERQSDRKRRKKEYGDSRNDYSG
Sbjct: 61  EYRGNDLRHKLDSRHSPLQERDSRGRHGPH-YSSSWSLERQSDRKRRKKEYGDSRNDYSG 120

Query: 121 NLRISDRSEERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSL 180
           NLRISDRSEERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSL
Sbjct: 121 NLRISDRSEERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSL 180

Query: 181 TSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKRQVYFSQVRLQQLGDQL 240
           TSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKR    SQVRL+QLGDQL
Sbjct: 181 TSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKR----SQVRLEQLGDQL 240

Query: 241 GSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAGNSKRAD 300
           GSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIA NSKRAD
Sbjct: 241 GSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAENSKRAD 300

Query: 301 LNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTVSS 360
           LNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVN LIPTAN+SKQKRGRTST VSS
Sbjct: 301 LNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVNALIPTANDSKQKRGRTSTAVSS 360

Query: 361 ADKVRGLESGVVVPLTSMAAHAVDEEVDIELEIN-------------------------- 412
           ADKVRGLESG VVPLTSMAAHAVDEEVDIEL++N                          
Sbjct: 361 ADKVRGLESG-VVPLTSMAAHAVDEEVDIELDVNNKVNETRENTKEASFGSLPFPPPPPP 420

[Close]

BLAST of Carg19081 vs. NCBI nr
Match: XP_023530200.1 (zinc finger CCCH domain-containing protein 40-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 701.8 bits (1810), Expect = 3.4e-198
Identity = 385/433 (88.91%), Postives = 391/433 (90.30%), Query Frame = 0


Query: 11  VLMTAWIFLYIFIISMALLELAWRHYYCSLFCFSSFPCNGRREYRGNDLRHKLDSRHSPL 70
           VL  AWIFLY+FIISMALLELAWRHYYCSLFCFSSFPCNGRREYRGNDLRHKLDSRHSPL
Sbjct: 7   VLSQAWIFLYLFIISMALLELAWRHYYCSLFCFSSFPCNGRREYRGNDLRHKLDSRHSPL 66

Query: 71  QERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSGNLRISDRSEERDREGKIS 130
           QERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSGNLRISDRSEERDREGKIS
Sbjct: 67  QERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSGNLRISDRSEERDREGKIS 126

Query: 131 SASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELESQLYKEREDS 190
           SASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELESQLYKEREDS
Sbjct: 127 SASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELESQLYKEREDS 186

Query: 191 RRIKSKIKKFVKAHNRYSRIQDELKRQVYFSQVRLQQLGDQLGSDVNKIGANEEDSSINI 250
           RRIKSKIKKFVKAHNRYSRIQDELKR    SQVRL+QLGDQLGSDVNKIGANEEDSSINI
Sbjct: 187 RRIKSKIKKFVKAHNRYSRIQDELKR----SQVRLEQLGDQLGSDVNKIGANEEDSSINI 246

Query: 251 VSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAGNSKRADLNKGSKEAVGRLRRFSRW 310
           VSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIA NSKRADLNKGSKEAVGRLRRFSRW
Sbjct: 247 VSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAENSKRADLNKGSKEAVGRLRRFSRW 306

Query: 311 NAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTVSSADKVRGLESGVVVPLTSM 370
           NAHPSQSVYSKIEAVGNEVN LIPTAN+SKQKRGRTST VSSADKVRGLESG VVPLTSM
Sbjct: 307 NAHPSQSVYSKIEAVGNEVNALIPTANDSKQKRGRTSTAVSSADKVRGLESG-VVPLTSM 366

Query: 371 AAHAVDEEVDIELEIN--------------------------------SKYESEDQNVDV 412
           AAHAVDEEVDIEL++N                                S+YESEDQNVDV
Sbjct: 367 AAHAVDEEVDIELDVNNKVNETRENTKEASFGSLPFPPPPPPIREINHSRYESEDQNVDV 426

[Close]

BLAST of Carg19081 vs. ExPASy Swiss-Prot
Match: Q93XW7 (Zinc finger CCCH domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=At3g21810 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.2e-30
Identity = 124/348 (35.63%), Postives = 182/348 (52.30%), Query Frame = 0


Query: 51  RREYRGNDLRHKLDSRHSPLQERDSRGRHGPR-----DYSSSWSLERQSDRKRRKKEYGD 110
           RR    +DLR +L  + SP + R S  R G R      + +S   E + D+  R+    D
Sbjct: 57  RRHNMDSDLRDRLGRQFSP-ERRPSLDRSGRRVQRFSGHDNSMPFENRRDKDYRENRRFD 116

Query: 111 SRNDYSGNLRISDRSEERDREGKIS-SASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDE 170
            R DY+G L++ +R E+R  +G+       + LE QL  ++ D++M    K + E  ++ 
Sbjct: 117 ERRDYAGGLKVGNRIEDRAEDGRNKFHGYNNVLEEQLKDVEMDVKMLTDDKLRLEASVER 176

Query: 171 RIQEVDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKRQVYFSQVR 230
           +  EVD LTSRIQELE+QL +E+++ RRI S  KKFVK +NR+ R QD+LKR    S+ R
Sbjct: 177 KAHEVDILTSRIQELETQLDREKDECRRITSSSKKFVKEYNRFLRAQDDLKR----SEAR 236

Query: 231 LQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFH---AVSPLHDLQKDNSASKKKHIV 290
           LQ+LG+QL + +     N  D  ++IVSD E  G +   A  P ++LQ  +S S+KKH V
Sbjct: 237 LQKLGNQLSTYLAGSEGNNRDVGLDIVSDEETNGRNLRTACDPHNELQNTSSLSRKKHYV 296

Query: 291 QDIAGNSKRAD--LNKGSKEAV-GRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLI--PTA 350
                     D  + +G +E V    +R   WN   S+S YS+ E+      D I   ++
Sbjct: 297 DQYTTKEPVEDGLIGRGEEEKVENEKKRPPCWNMLSSKS-YSEEESGAWNDEDTINRSSS 356

Query: 351 NESKQKRGRTSTTVSSADKVRGLESGVVVPLTSMAAHAVDEEVDIELE 385
            E   KR R S   S+ DK        V+  TSMAA   D+  + E E
Sbjct: 357 KEDNWKRRRFSIGTSATDK--------VILSTSMAAREFDDVAESEEE 390

[Close]

BLAST of Carg19081 vs. ExPASy Swiss-Prot
Match: Q6H7U2 (Zinc finger CCCH domain-containing protein 13 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0161200 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.9e-29
Identity = 124/377 (32.89%), Postives = 195/377 (51.72%), Query Frame = 0


Query: 50  GRREYRGNDLRHKLDSRHSPLQE----RDSRGRHGP----------RDYSSSWSLERQSD 109
           GRR+YR  D R ++D R SP +     R+SRG H P          RD S S S  R+S+
Sbjct: 53  GRRDYRAGDFRGRIDRRFSPRRRHSPGRESRG-HRPLYDRRPSSRERDSSYSRSPSRKSE 112

Query: 110 RKRRKKEYGDSRNDYSGNLRISDRSEERDREGKISSASRDTLEGQLNKMQADIEMAEHHK 169
           R+  KK   D   + S +L +SD ++E+ ++   S   ++  E QL +++ D+E     K
Sbjct: 113 RRHEKKT-DDGETNSSRSLSLSDNNDEKKKDKFSSGDEKEDHEKQLKQIRLDMEALRDDK 172

Query: 170 HQAEVYLDERIQEVDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELK 229
            Q EV LDE+I EV  ++S++ +LE QL +E+++  R+ SK+KKF+KAH R+ + Q+E+K
Sbjct: 173 TQMEVILDEKIDEVRKISSKVNDLEVQLRREKDECHRMTSKMKKFIKAHARFLKAQEEVK 232

Query: 230 RQVYFSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAVS----PLHDLQKD 289
           R    SQ R ++LGD L SD+ K GANEE SS+N   +   P   A      P    ++ 
Sbjct: 233 R----SQARFERLGDLLASDILKRGANEEGSSVNEDLNERSPNTAATKKRSIPYSTSEEA 292

Query: 290 NSASKKKHIVQDIAGNSK--RADLNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEV 349
            +  K++    D    S   R+D+    K + G            ++S+Y K +   +E 
Sbjct: 293 KAVKKRRERDSDTMTRSDKYRSDVTDFDKTSKG---------TEATKSLYLKKKLWEDE- 352

Query: 350 NDLIPTANESKQKRGRTSTTVSSADKVRGLESGVVVPLTSMAAHAVDEEVDIELEINSKY 407
                     K K G    T    +KV+G     V+P T MAAHA+D +++  +E+  ++
Sbjct: 353 ----------KSKLGANIFT----EKVKGSPVRHVLPSTGMAAHAID-DLNEAIELEDRH 398

[Close]

BLAST of Carg19081 vs. ExPASy TrEMBL
Match: A0A6J1EWA4 (zinc finger CCCH domain-containing protein 40-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437138 PE=4 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 1.6e-204
Identity = 395/433 (91.22%), Postives = 395/433 (91.22%), Query Frame = 0


Query: 11  VLMTAWIFLYIFIISMALLELAWRHYYCSLFCFSSFPCNGRREYRGNDLRHKLDSRHSPL 70
           VL  AWIFLYIFIISMALLELAWRHYYCSLFCFSSFPCNGRREYRGNDLRHKLDSRHSPL
Sbjct: 7   VLSQAWIFLYIFIISMALLELAWRHYYCSLFCFSSFPCNGRREYRGNDLRHKLDSRHSPL 66

Query: 71  QERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSGNLRISDRSEERDREGKIS 130
           QERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSGNLRISDRSEERDREGKIS
Sbjct: 67  QERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSGNLRISDRSEERDREGKIS 126

Query: 131 SASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELESQLYKEREDS 190
           SASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELESQLYKEREDS
Sbjct: 127 SASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELESQLYKEREDS 186

Query: 191 RRIKSKIKKFVKAHNRYSRIQDELKRQVYFSQVRLQQLGDQLGSDVNKIGANEEDSSINI 250
           RRIKSKIKKFVKAHNRYSRIQDELKR    SQVRLQQLGDQLGSDVNKIGANEEDSSINI
Sbjct: 187 RRIKSKIKKFVKAHNRYSRIQDELKR----SQVRLQQLGDQLGSDVNKIGANEEDSSINI 246

Query: 251 VSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAGNSKRADLNKGSKEAVGRLRRFSRW 310
           VSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAGNSKRADLNKGSKEAVGRLRRFSRW
Sbjct: 247 VSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAGNSKRADLNKGSKEAVGRLRRFSRW 306

Query: 311 NAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTVSSADKVRGLESGVVVPLTSM 370
           NAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTVSSADKVRGLESGVVVPLTSM
Sbjct: 307 NAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTVSSADKVRGLESGVVVPLTSM 366

Query: 371 AAHAVDEEVDIELEIN--------------------------------SKYESEDQNVDV 412
           AAHAVDEEVDIELEIN                                SKYESEDQNVDV
Sbjct: 367 AAHAVDEEVDIELEINSKVNETRENTKEASFGSLPFPPPPPPIREINHSKYESEDQNVDV 426

[Close]

BLAST of Carg19081 vs. ExPASy TrEMBL
Match: A0A6J1JMK2 (zinc finger CCCH domain-containing protein 40-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486025 PE=4 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 7.7e-196
Identity = 377/419 (89.98%), Postives = 379/419 (90.45%), Query Frame = 0


Query: 26  MALLELAWRHYYCSLFCFSSFPCNGRREYRGNDLRHKLDSRHSPLQERDSRGRHGPRDYS 85
           MALLELAWRHYYCSLFCFSSFPCNGRREYRGNDLRHKLDSRHSPLQERDSRGRHGPRDYS
Sbjct: 1   MALLELAWRHYYCSLFCFSSFPCNGRREYRGNDLRHKLDSRHSPLQERDSRGRHGPRDYS 60

Query: 86  SSWSLERQSDRKRRKKEYGDSRNDYSGNLRISDRSEERDREGKISSASRDTLEGQLNKMQ 145
           SSWSLERQSDRKRRKKEYGDSRNDYSGNLRISDRSEERDREGKISSASRDTLEGQLNKMQ
Sbjct: 61  SSWSLERQSDRKRRKKEYGDSRNDYSGNLRISDRSEERDREGKISSASRDTLEGQLNKMQ 120

Query: 146 ADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHN 205
           ADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHN
Sbjct: 121 ADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHN 180

Query: 206 RYSRIQDELKRQVYFSQVRLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAVSPL 265
           RYSRIQDELKR    SQ RLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAVSPL
Sbjct: 181 RYSRIQDELKR----SQARLQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAVSPL 240

Query: 266 HDLQKDNSASKKKHIVQDIAGNSKRADLNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAV 325
           HDLQKDNSASKKKH+VQDIA NSKRADLNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAV
Sbjct: 241 HDLQKDNSASKKKHVVQDIAENSKRADLNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAV 300

Query: 326 GNEVNDLIPTANESKQKRGRTSTTVSSADKVRGLESGVVVPLTSMAAHAVDEEVDIELEI 385
           GNEVNDLIPTANESKQKRGRTSTTVSSADKVRGLESGVVVPLTSMAAHAVDEEVDIELEI
Sbjct: 301 GNEVNDLIPTANESKQKRGRTSTTVSSADKVRGLESGVVVPLTSMAAHAVDEEVDIELEI 360

Query: 386 N---------------------------------SKYESEDQNVDVVALDDERARLDNA 412
           N                                 S+YESEDQNVDVV LDDERARLDNA
Sbjct: 361 NNKVNETRENTKEASFGSLPFPPPPPPPIREINHSRYESEDQNVDVVTLDDERARLDNA 415

[Close]

BLAST of Carg19081 vs. ExPASy TrEMBL
Match: A0A6J1ESE6 (zinc finger CCCH domain-containing protein 40-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437138 PE=4 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.7e-182
Identity = 358/395 (90.63%), Postives = 359/395 (90.89%), Query Frame = 0


Query: 49  NGRREYRGNDLRHKLDSRHSPLQERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRN 108
           +GRREYRGNDLRHKLDSRHSPLQERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRN
Sbjct: 43  DGRREYRGNDLRHKLDSRHSPLQERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRN 102

Query: 109 DYSGNLRISDRSEERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQE 168
           DYSGNLRISDRSEERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQE
Sbjct: 103 DYSGNLRISDRSEERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQE 162

Query: 169 VDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKRQVYFSQVRLQQL 228
           VDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKR    SQVRLQQL
Sbjct: 163 VDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKR----SQVRLQQL 222

Query: 229 GDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAGNS 288
           GDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAGNS
Sbjct: 223 GDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAGNS 282

Query: 289 KRADLNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTST 348
           KRADLNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTST
Sbjct: 283 KRADLNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTST 342

Query: 349 TVSSADKVRGLESGVVVPLTSMAAHAVDEEVDIELEIN---------------------- 408
           TVSSADKVRGLESGVVVPLTSMAAHAVDEEVDIELEIN                      
Sbjct: 343 TVSSADKVRGLESGVVVPLTSMAAHAVDEEVDIELEINSKVNETRENTKEASFGSLPFPP 402

Query: 409 ----------SKYESEDQNVDVVALDDERARLDNA 412
                     SKYESEDQNVDVVALDDERARLDNA
Sbjct: 403 PPPPIREINHSKYESEDQNVDVVALDDERARLDNA 433

[Close]

BLAST of Carg19081 vs. ExPASy TrEMBL
Match: A0A6J1JI85 (zinc finger CCCH domain-containing protein 40-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486025 PE=4 SV=1)

HSP 1 Score: 640.6 bits (1651), Expect = 4.6e-180
Identity = 353/396 (89.14%), Postives = 356/396 (89.90%), Query Frame = 0


Query: 49  NGRREYRGNDLRHKLDSRHSPLQERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRN 108
           +GRREYRGNDLRHKLDSRHSPLQERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRN
Sbjct: 43  DGRREYRGNDLRHKLDSRHSPLQERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRN 102

Query: 109 DYSGNLRISDRSEERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQE 168
           DYSGNLRISDRSEERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQE
Sbjct: 103 DYSGNLRISDRSEERDREGKISSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQE 162

Query: 169 VDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKRQVYFSQVRLQQL 228
           VDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKR    SQ RLQQL
Sbjct: 163 VDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKR----SQARLQQL 222

Query: 229 GDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKKHIVQDIAGNS 288
           GDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKKH+VQDIA NS
Sbjct: 223 GDQLGSDVNKIGANEEDSSINIVSDGEDPGFHAVSPLHDLQKDNSASKKKHVVQDIAENS 282

Query: 289 KRADLNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTST 348
           KRADLNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTST
Sbjct: 283 KRADLNKGSKEAVGRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTST 342

Query: 349 TVSSADKVRGLESGVVVPLTSMAAHAVDEEVDIELEIN---------------------- 408
           TVSSADKVRGLESGVVVPLTSMAAHAVDEEVDIELEIN                      
Sbjct: 343 TVSSADKVRGLESGVVVPLTSMAAHAVDEEVDIELEINNKVNETRENTKEASFGSLPFPP 402

Query: 409 -----------SKYESEDQNVDVVALDDERARLDNA 412
                      S+YESEDQNVDVV LDDERARLDNA
Sbjct: 403 PPPPPIREINHSRYESEDQNVDVVTLDDERARLDNA 434

[Close]

BLAST of Carg19081 vs. ExPASy TrEMBL
Match: A0A1S3C0V1 (zinc finger CCCH domain-containing protein 13 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495581 PE=4 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 4.0e-168
Identity = 329/437 (75.29%), Postives = 361/437 (82.61%), Query Frame = 0


Query: 10  LVLMTAWIFLYIFIISMALLELAWRHYYCSLFCFSSFPCNGRREYRGNDLRHKLDSRHSP 69
           +V   AWIFLY+FIISM LLELAWRH YCSLFCFSSFPCNGR EYRGNDLRHKLDSRHSP
Sbjct: 1   MVYSWAWIFLYLFIISMDLLELAWRHSYCSLFCFSSFPCNGRTEYRGNDLRHKLDSRHSP 60

Query: 70  LQERDSRGRHGPRDYSSSWSLERQSDRKRRKKEYGDSRNDYSGNLRISDRSEERDREGKI 129
            QERDSRGRH PR+YSSSWSLER SDRKRRKKE+GD+  DYSGNLRISDR+EE DR+GKI
Sbjct: 61  QQERDSRGRHVPREYSSSWSLERHSDRKRRKKEHGDACRDYSGNLRISDRNEEHDRQGKI 120

Query: 130 SSASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDERIQEVDSLTSRIQELESQLYKERED 189
           SS SRDTLEGQLNKMQ DIEMAE  KHQAEVYLDE+IQEVDSL SR+QELESQLY ER++
Sbjct: 121 SSVSRDTLEGQLNKMQTDIEMAEQRKHQAEVYLDEKIQEVDSLASRVQELESQLYNERQE 180

Query: 190 SRRIKSKIKKFVKAHNRYSRIQDELKRQVYFSQVRLQQLGDQLGSDVNKIGANEEDSSIN 249
            RRIKSKIKKFVKAHNR+SR+QDEL R    SQVRLQQLGDQLGSDVNKIGANEEDSSIN
Sbjct: 181 CRRIKSKIKKFVKAHNRHSRLQDELNR----SQVRLQQLGDQLGSDVNKIGANEEDSSIN 240

Query: 250 IVSDGEDPGFHAVSPLHDLQKDNSASKKK-HIVQDIAGNSKRADLNKGSKEAVGRLRRFS 309
           IVSDG++PG+HA  P H LQ+D SASK+K H VQDIA NSKRADLNKG+KEAVGRLRR S
Sbjct: 241 IVSDGDEPGYHASDPFHGLQRDTSASKRKMHAVQDIAENSKRADLNKGNKEAVGRLRRNS 300

Query: 310 RWNAHPSQSVYSKIEAVGNEVNDLIPTANESKQKRGRTSTTVSSADKVRGLESGVVVPLT 369
           RWNAHP++S YSKIE VGNE+NDLIPTANES+Q+RGRTS++VSSADKVRGL+SGV VPLT
Sbjct: 301 RWNAHPAKSTYSKIEMVGNEINDLIPTANESRQRRGRTSSSVSSADKVRGLDSGVAVPLT 360

Query: 370 SMAAHAVDEEVDIELEIN----------------------------------SKYESEDQ 412
           SMA HAVDEEVDI+LEIN                                  SKYE EDQ
Sbjct: 361 SMAGHAVDEEVDIDLEINHEEKEPRESSMEAASGSLPFLPPPPPPPIREFSHSKYEGEDQ 420

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BLAST of Carg19081 vs. TAIR 10
Match: AT3G21810.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 134.8 bits (338), Expect = 1.6e-31
Identity = 124/348 (35.63%), Postives = 182/348 (52.30%), Query Frame = 0


Query: 51  RREYRGNDLRHKLDSRHSPLQERDSRGRHGPR-----DYSSSWSLERQSDRKRRKKEYGD 110
           RR    +DLR +L  + SP + R S  R G R      + +S   E + D+  R+    D
Sbjct: 57  RRHNMDSDLRDRLGRQFSP-ERRPSLDRSGRRVQRFSGHDNSMPFENRRDKDYRENRRFD 116

Query: 111 SRNDYSGNLRISDRSEERDREGKIS-SASRDTLEGQLNKMQADIEMAEHHKHQAEVYLDE 170
            R DY+G L++ +R E+R  +G+       + LE QL  ++ D++M    K + E  ++ 
Sbjct: 117 ERRDYAGGLKVGNRIEDRAEDGRNKFHGYNNVLEEQLKDVEMDVKMLTDDKLRLEASVER 176

Query: 171 RIQEVDSLTSRIQELESQLYKEREDSRRIKSKIKKFVKAHNRYSRIQDELKRQVYFSQVR 230
           +  EVD LTSRIQELE+QL +E+++ RRI S  KKFVK +NR+ R QD+LKR    S+ R
Sbjct: 177 KAHEVDILTSRIQELETQLDREKDECRRITSSSKKFVKEYNRFLRAQDDLKR----SEAR 236

Query: 231 LQQLGDQLGSDVNKIGANEEDSSINIVSDGEDPGFH---AVSPLHDLQKDNSASKKKHIV 290
           LQ+LG+QL + +     N  D  ++IVSD E  G +   A  P ++LQ  +S S+KKH V
Sbjct: 237 LQKLGNQLSTYLAGSEGNNRDVGLDIVSDEETNGRNLRTACDPHNELQNTSSLSRKKHYV 296

Query: 291 QDIAGNSKRAD--LNKGSKEAV-GRLRRFSRWNAHPSQSVYSKIEAVGNEVNDLI--PTA 350
                     D  + +G +E V    +R   WN   S+S YS+ E+      D I   ++
Sbjct: 297 DQYTTKEPVEDGLIGRGEEEKVENEKKRPPCWNMLSSKS-YSEEESGAWNDEDTINRSSS 356

Query: 351 NESKQKRGRTSTTVSSADKVRGLESGVVVPLTSMAAHAVDEEVDIELE 385
            E   KR R S   S+ DK        V+  TSMAA   D+  + E E
Sbjct: 357 KEDNWKRRRFSIGTSATDK--------VILSTSMAAREFDDVAESEEE 390

The following BLAST results are available for this feature:

BLAST of Carg19081 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022878.1	6.4e-221	100.00	Zinc finger CCCH domain-containing protein 13 [Cucurbita argyrosperma subsp. arg...	[more]
XP_022930758.1	3.2e-204	91.22	zinc finger CCCH domain-containing protein 40-like isoform X1 [Cucurbita moschat...	[more]
XP_023530198.1	7.9e-203	87.80	zinc finger CCCH domain-containing protein 13-like isoform X1 [Cucurbita pepo su...	[more]
XP_023530199.1	3.7e-200	87.36	zinc finger CCCH domain-containing protein 13-like isoform X2 [Cucurbita pepo su...	[more]
XP_023530200.1	3.4e-198	88.91	zinc finger CCCH domain-containing protein 40-like isoform X3 [Cucurbita pepo su...	[more]

BLAST of Carg19081 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93XW7	2.2e-30	35.63	Zinc finger CCCH domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6H7U2	1.9e-29	32.89	Zinc finger CCCH domain-containing protein 13 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of Carg19081 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWA4	1.6e-204	91.22	zinc finger CCCH domain-containing protein 40-like isoform X1 OS=Cucurbita mosch...	[more]
A0A6J1JMK2	7.7e-196	89.98	zinc finger CCCH domain-containing protein 40-like isoform X2 OS=Cucurbita maxim...	[more]
A0A6J1ESE6	1.7e-182	90.63	zinc finger CCCH domain-containing protein 40-like isoform X2 OS=Cucurbita mosch...	[more]
A0A6J1JI85	4.6e-180	89.14	zinc finger CCCH domain-containing protein 40-like isoform X1 OS=Cucurbita maxim...	[more]
A0A1S3C0V1	4.0e-168	75.29	zinc finger CCCH domain-containing protein 13 isoform X3 OS=Cucumis melo OX=3656...	[more]

BLAST of Carg19081 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21810.1	1.6e-31	35.63	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 162..196
None	No IPR available	COILS	Coil	Coil	coord: 134..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..138
None	No IPR available	PANTHER	PTHR38160:SF1	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40	coord: 45..405
None	No IPR available	PANTHER	PTHR38160	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40	coord: 45..405

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19081-RA	Carg19081-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding