Carg19075 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19075
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	sigma intracellular receptor 2-like
Location	Carg_Chr11: 12233999 .. 12236080 (+)
RNA-Seq Expression	Carg19075
Synteny	Carg19075

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTGAGCAGCCCAGCCCAAGATCCGATCAATTGCTCTGCTCAGAGACTCTGGGAAGAAAGCTCTGTGGAACCATGGGCGCTCTTCTCAAGCTCGTTGACGTTCTACTGTTCCTCGCCTTTCTCCTACTTGCAGTTGTAGTGCCTTTAATCGATTTCCAGGAGGTATTCCCTAAAAGCTTTTATCCTGATTTTGTAATCGATCTCAAGAGATGGTACGTCGCCCAATCGGGGGATTATTTAATGGCCGAGGCTCCTCATTTCGTCGTTGGCCTTATTTGGTTCGAGCTTCTTTTTCAATGGCCTCTCTTGTTTCTCAATCTCTATGCCTTCTTGAGCTCCAAGGCTTGGTACAAGACCACTTGCTTGATCTATGGCGTTTCTCTCGTGTCTTCCATGGTATTTTTCTGTTCATGTTCGGATTAATTTGGTTTTTGATTGATGGAATTTGTTCATAGCCTGTTGATTTTATCTTTGTTTGATTGAATGTATCTATTTTAGGTTAGGATTGAGTAGGGAGAGGATTTTGGATATGTTTAAGCATTTGGCGGAGTGGACGATGGATTTGTGGAGTTAATAGTGAGGAACCTTGGACAAATTTGAAGTTAGTAGAGTTTATTCCAGTCTTGTAGAGATTCAATATACATAACTTGGTTGTTCTTCAGCTTTTCTAGAACATTTTTAGAAGAATGTCATTTCTAGATTCTTGATTTATGTAGTTGATGATGCTGATAGAAGTTTTGGTTTCATTTTTGATTTTAAGTTCAATAATATGGAGACCAGGATTCAATCATGTAATCTCTTGGTTGACGGTATGTGTTAGGAATCACACATCTCCACAATAGTATGATATTGTACATTTTGAGCATAAACTCTCATGGTTTTGTTTTTGGTCGCTGTATTCCTTACTTATAAACTCATAATCAGCTCCTTAATTAGCCGATGTGGCACTCATCTCCGAACAATTCCTCTCATTGAACAAAGTACATCATAGAGCCTCTTCTGAGACCTATGGAGCCCTCAAACTACCTCCCCTTAATTGAGACTCGACTCCTGTTCTGGAGCACTCAAACAAATTACACCCTTTGTTCGACACTTGAGTCACTTTTGACTACACCTTAGAGACTCACAACTTCTTTCTTCGACATTTGAGAATTCTATTGACATGACTAAATTAAAGGGCATGGACTCTGATACTATGTTAGAAACCACAAACCTCCACAATGGTATGATATTGTCCACATTGAGCACAAACTCTCGTGGTTTTGTTTTAGTTTCCCAAAATGACTCATACCAATGTAGATGTATTCTTTACTTATAAACCCATGATCAACCCCTTAATTAGCCGATGTGGATTCTTGTACCAACAGTATGTGCTTTAACTAGCTGAATAATGCTCGGGTTGACCTAATCGAAGTGATAGTTAGGTGGGATAGCTTGTATGATGTTTTTTTTTTCATAAGCTAGTATTGAACTAGCTTGGGACTGCATTCTTGTCAATAAACTAAGGATTCAACATCAGGCTTTTGGCTTTAAATGGTGCATTTGAGATAGCTAACTGCAAGATAAAAAGGATTTTTCTGCTTCGTTTGTTAACCTTCTTGCGGAGATCCGCTAGTTTCTATGTCATCTCTTTCAGAGAAATTTTACTTGTATTGAATCACATTATCTGGCTGTGTAATTTCAGTCTGCTACGATGGGTGAAGTGGTTGGATCAAACCGGGCGTCTAATACTCTGTTGACAATCTACTGGCCCTTCATGGGTTTGGGGGTGTTGGCCACGCTACGCGGGCTCGTGCCATGCTCGAGCAAGGCTCCGATCAACGGACCCAGACCATCAAATGGCAGGAAAAAGAGGGCTTGAAGTGCCATCCTAGATCGCCAATGGTCTGTCCCGACTGAGCGTATCACATTGTCGGACTGAGGATGTTGGTTCTTTAGGTAATGGTGCAACTCTCTCTTTTAACCTTCTAGTAGTCTTTCATTGTATGAGTGGTAGTGGTTCAATATTTGATCGTTTTAAGAATAAAATTGAGTTAAACCGAATCGAATTACATGAATGGTATTAATCCTTTTTTTAGCA

mRNA sequence

AAATTGAGCAGCCCAGCCCAAGATCCGATCAATTGCTCTGCTCAGAGACTCTGGGAAGAAAGCTCTGTGGAACCATGGGCGCTCTTCTCAAGCTCGTTGACGTTCTACTGTTCCTCGCCTTTCTCCTACTTGCAGTTGTAGTGCCTTTAATCGATTTCCAGGAGGTATTCCCTAAAAGCTTTTATCCTGATTTTGTAATCGATCTCAAGAGATGGTACGTCGCCCAATCGGGGGATTATTTAATGGCCGAGGCTCCTCATTTCGTCGTTGGCCTTATTTGGTTCGAGCTTCTTTTTCAATGGCCTCTCTTGTTTCTCAATCTCTATGCCTTCTTGAGCTCCAAGGCTTGGTACAAGACCACTTGCTTGATCTATGGCGTTTCTCTCGTGTCTTCCATGTCTGCTACGATGGGTGAAGTGGTTGGATCAAACCGGGCGTCTAATACTCTGTTGACAATCTACTGGCCCTTCATGGGTTTGGGGGTGTTGGCCACGCTACGCGGGCTCGTGCCATGCTCGAGCAAGGCTCCGATCAACGGACCCAGACCATCAAATGGCAGGAAAAAGAGGGCTTGAAGTGCCATCCTAGATCGCCAATGGTCTGTCCCGACTGAGCGTATCACATTGTCGGACTGAGGATGTTGGTTCTTTAGGTAATGGTGCAACTCTCTCTTTTAACCTTCTAGTAGTCTTTCATTGTATGAGTGGTAGTGGTTCAATATTTGATCGTTTTAAGAATAAAATTGAGTTAAACCGAATCGAATTACATGAATGGTATTAATCCTTTTTTTAGCA

Coding sequence (CDS)

ATGGGCGCTCTTCTCAAGCTCGTTGACGTTCTACTGTTCCTCGCCTTTCTCCTACTTGCAGTTGTAGTGCCTTTAATCGATTTCCAGGAGGTATTCCCTAAAAGCTTTTATCCTGATTTTGTAATCGATCTCAAGAGATGGTACGTCGCCCAATCGGGGGATTATTTAATGGCCGAGGCTCCTCATTTCGTCGTTGGCCTTATTTGGTTCGAGCTTCTTTTTCAATGGCCTCTCTTGTTTCTCAATCTCTATGCCTTCTTGAGCTCCAAGGCTTGGTACAAGACCACTTGCTTGATCTATGGCGTTTCTCTCGTGTCTTCCATGTCTGCTACGATGGGTGAAGTGGTTGGATCAAACCGGGCGTCTAATACTCTGTTGACAATCTACTGGCCCTTCATGGGTTTGGGGGTGTTGGCCACGCTACGCGGGCTCGTGCCATGCTCGAGCAAGGCTCCGATCAACGGACCCAGACCATCAAATGGCAGGAAAAAGAGGGCTTGA

Protein sequence

MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEAPHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNRASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA

Homology

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BLAST of Carg19075 vs. NCBI nr
Match: XP_022930653.1 (sigma intracellular receptor 2-like [Cucurbita moschata] >KAG7022872.1 Transmembrane protein 97 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.2 bits (827), Expect = 1.3e-84
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60
           MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA
Sbjct: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120
           PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR
Sbjct: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120

Query: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA 167
           ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA
Sbjct: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA 166

[Close]

BLAST of Carg19075 vs. NCBI nr
Match: KAG6589170.1 (Sigma intracellular receptor 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 320.9 bits (821), Expect = 6.7e-84
Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60
           M ALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA
Sbjct: 1   MSALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120
           PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR
Sbjct: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120

Query: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA 167
           ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA
Sbjct: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA 166

[Close]

BLAST of Carg19075 vs. NCBI nr
Match: XP_022988976.1 (sigma intracellular receptor 2-like [Cucurbita maxima])

HSP 1 Score: 308.9 bits (790), Expect = 2.6e-80
Identity = 159/166 (95.78%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60
           MGALLKLVD LLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLK WYVAQSGDYLM EA
Sbjct: 1   MGALLKLVDALLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKSWYVAQSGDYLMVEA 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120
           PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAW+ TTCLIYGVSLVSSMSATMGEVVGSNR
Sbjct: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWFNTTCLIYGVSLVSSMSATMGEVVGSNR 120

Query: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA 167
           ASNTLLTIYWPFMGLGVLA LRGLVPCSSKA INGPRPSNGRKKRA
Sbjct: 121 ASNTLLTIYWPFMGLGVLAMLRGLVPCSSKATINGPRPSNGRKKRA 166

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BLAST of Carg19075 vs. NCBI nr
Match: XP_023530196.1 (sigma intracellular receptor 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301.6 bits (771), Expect = 4.2e-78
Identity = 155/166 (93.37%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60
           MGALLKLVD LLFLAFL+LAVVVPLIDFQEV PKS YPD VIDLKRWYVA+SGDYLMAEA
Sbjct: 1   MGALLKLVDALLFLAFLVLAVVVPLIDFQEVLPKSLYPDSVIDLKRWYVARSGDYLMAEA 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120
           PHFVVGLIWFELLFQWPLLFLNLYAF SSKAWY+TTCLIYGVSLVSSMSA MGEVVGSNR
Sbjct: 61  PHFVVGLIWFELLFQWPLLFLNLYAFFSSKAWYRTTCLIYGVSLVSSMSAVMGEVVGSNR 120

Query: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA 167
           ASNTLLTIYWPFMGLGVLA LRGLVPCSSKA INGPRPSNGRKKRA
Sbjct: 121 ASNTLLTIYWPFMGLGVLAVLRGLVPCSSKATINGPRPSNGRKKRA 166

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BLAST of Carg19075 vs. NCBI nr
Match: XP_022952624.1 (sigma intracellular receptor 2-like [Cucurbita moschata])

HSP 1 Score: 261.5 bits (667), Expect = 4.8e-66
Identity = 130/166 (78.31%), Postives = 149/166 (89.76%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60
           MGALLKLVD LLFLAFLLLA+V PLIDFQ +FP++ +P F+IDLK WY+ QSGDY+MA++
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120
           PHFVVGL+W ELLFQWPLL LNLYAFL++K WY TTCLIYGVSLV+SMSA +GE+VGSNR
Sbjct: 61  PHFVVGLVWLELLFQWPLLLLNLYAFLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA 167
           ASNTL+TIY+PF+GLGVLA LRGLV CSSKA I G RPSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

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BLAST of Carg19075 vs. ExPASy Swiss-Prot
Match: Q6DFQ5 (Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.2e-07
Identity = 39/154 (25.32%), Postives = 71/154 (46.10%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60
           M    +L++ + F  F     +  L+D Q V P S YP  ++DL +WY     D+LMA  
Sbjct: 1   MAVCARLLEWIFFFYFFSHIPITLLVDLQAVLPPSLYPQELLDLMKWYTVAFKDHLMANP 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKA-WYKTTCLIYGVSLVSSMSATMGEVVG-- 120
           P +    ++ E + Q P   +  YAF      W +   ++Y   + +++ A +G ++   
Sbjct: 61  PPWFKSFVYCEAILQLPFFPVAAYAFFKGGCKWIRIPAIVYSAHVATTVIAIIGHILFGE 120

Query: 121 ----------SNRASNTLLTIYWPFMGLGVLATL 142
                     + +   TL++IY P++ + VL  L
Sbjct: 121 FPKSDVIAPLTQKDRLTLVSIYAPYLLVPVLLLL 154

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BLAST of Carg19075 vs. ExPASy TrEMBL
Match: A0A6J1EVW1 (sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111437055 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.5e-85
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60
           MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA
Sbjct: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120
           PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR
Sbjct: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120

Query: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA 167
           ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA
Sbjct: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA 166

[Close]

BLAST of Carg19075 vs. ExPASy TrEMBL
Match: A0A6J1JIQ0 (sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486176 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 159/166 (95.78%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60
           MGALLKLVD LLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLK WYVAQSGDYLM EA
Sbjct: 1   MGALLKLVDALLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKSWYVAQSGDYLMVEA 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120
           PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAW+ TTCLIYGVSLVSSMSATMGEVVGSNR
Sbjct: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWFNTTCLIYGVSLVSSMSATMGEVVGSNR 120

Query: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA 167
           ASNTLLTIYWPFMGLGVLA LRGLVPCSSKA INGPRPSNGRKKRA
Sbjct: 121 ASNTLLTIYWPFMGLGVLAMLRGLVPCSSKATINGPRPSNGRKKRA 166

[Close]

BLAST of Carg19075 vs. ExPASy TrEMBL
Match: A0A6J1GM86 (sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111455258 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.3e-66
Identity = 130/166 (78.31%), Postives = 149/166 (89.76%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60
           MGALLKLVD LLFLAFLLLA+V PLIDFQ +FP++ +P F+IDLK WY+ QSGDY+MA++
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120
           PHFVVGL+W ELLFQWPLL LNLYAFL++K WY TTCLIYGVSLV+SMSA +GE+VGSNR
Sbjct: 61  PHFVVGLVWLELLFQWPLLLLNLYAFLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA 167
           ASNTL+TIY+PF+GLGVLA LRGLV CSSKA I G RPSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

[Close]

BLAST of Carg19075 vs. ExPASy TrEMBL
Match: A0A6J1HVX1 (sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468330 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.0e-65
Identity = 129/166 (77.71%), Postives = 148/166 (89.16%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60
           MGALLKLVD LLFLAFLLLA+V PLIDFQ +FP++ +P F+IDLK WY+ QSGDY+MA++
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPQTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120
           PHFVV L+W ELLFQWPLL LNLYAFL++K WY TTCLIYGVSLV+SMSA +GE+VGSNR
Sbjct: 61  PHFVVALVWLELLFQWPLLLLNLYAFLAAKPWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA 167
           ASNTL+TIY+PF+GLGVLA LRGLV CSSKA I G RPSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

[Close]

BLAST of Carg19075 vs. ExPASy TrEMBL
Match: A0A0A0K5K2 (EXPERA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044230 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.9e-62
Identity = 124/166 (74.70%), Postives = 143/166 (86.14%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60
           MGA LKL+DVLLFL FL+LA++ PLIDFQ +FP + +PDF+IDLK  Y  Q GDYLMAE+
Sbjct: 1   MGAFLKLIDVLLFLIFLILAILSPLIDFQLIFPHTLFPDFLIDLKTSYTRQYGDYLMAES 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120
           P F+VGL+W EL FQWP++ LNLYAFL+SK WY TTCLIYGVS+VSSMSA +GE+VGSNR
Sbjct: 61  PPFLVGLVWLELFFQWPIMLLNLYAFLASKPWYNTTCLIYGVSVVSSMSAVLGEMVGSNR 120

Query: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA 167
           AS TLLTIY+PF+GLGVLA LRGLVPCSSKA I G RPSNGRKKRA
Sbjct: 121 ASTTLLTIYYPFLGLGVLAMLRGLVPCSSKAAITGTRPSNGRKKRA 166

[Close]

BLAST of Carg19075 vs. TAIR 10
Match: AT2G32380.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 171.0 bits (432), Expect = 8.0e-43
Identity = 88/168 (52.38%), Postives = 122/168 (72.62%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60
           MGA  KL+D +LFL F L+AV+ PLID Q   P   +P F++DL RWY+ + GDYL+ E 
Sbjct: 1   MGAFCKLIDAVLFLYFALMAVIAPLIDGQTSLPGDIFPAFIVDLNRWYIDEFGDYLVKEK 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120
           PHF+VGL+W ELL  WPL  +N+YA L+ K+W+ TT ++YG S+V+SM+A +GE++GS +
Sbjct: 61  PHFLVGLVWHELLLLWPLSIVNVYAILAGKSWFGTTSMVYGASVVTSMAAILGEMIGSGK 120

Query: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSKA-PINGPRPS-NGRKKRA 167
           AS  LL +Y PFMG+G+LA LRGL+  S+K+    G RP+   R+KRA
Sbjct: 121 ASEKLLMMYVPFMGVGILALLRGLLSQSNKSGGAVGKRPAILARRKRA 168

[Close]

BLAST of Carg19075 vs. TAIR 10
Match: AT1G05210.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 170.6 bits (431), Expect = 1.0e-42
Identity = 85/150 (56.67%), Postives = 112/150 (74.67%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60
           MGAL KL+DV LF+ F+ +A++ PLID Q   P   YP F+ DLK  Y+A  GDYL+ E 
Sbjct: 1   MGALGKLIDVALFVYFVSMAIIAPLIDGQTSLPSGIYPAFLTDLKSKYIADFGDYLLMEK 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120
           PHF+VGL+W ELLF WPL   N+YA L+ K+W+ TTCL+YG SLV+SM+A +G+++GS +
Sbjct: 61  PHFLVGLVWHELLFLWPLSIANVYAILAGKSWFGTTCLLYGASLVTSMAAILGDMIGSGK 120

Query: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSK 151
           AS+ LL +Y PFMG G+LA LRGLV  S+K
Sbjct: 121 ASDRLLMMYVPFMGFGILAVLRGLVYRSTK 150

[Close]

BLAST of Carg19075 vs. TAIR 10
Match: AT1G05220.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-35
Identity = 75/150 (50.00%), Postives = 107/150 (71.33%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60
           MGAL KL+++ LF  F L+A+ VPL++ Q +FP   YP  + DLK WY ++  DYL  E 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFP-GIYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120
           P F VGL+W E++F  PL  +N+YA L+SK+W+ TT L+YG S ++SM+A +G+++GS +
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSK 151
            +N LL  Y PF+GL +LA LRGLV CS+K
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLVTCSTK 149

[Close]

BLAST of Carg19075 vs. TAIR 10
Match: AT1G05220.2 (Transmembrane protein 97, predicted )

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-35
Identity = 75/150 (50.00%), Postives = 107/150 (71.33%), Query Frame = 0


Query: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60
           MGAL KL+++ LF  F L+A+ VPL++ Q +FP   YP  + DLK WY ++  DYL  E 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFP-GIYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120
           P F VGL+W E++F  PL  +N+YA L+SK+W+ TT L+YG S ++SM+A +G+++GS +
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSK 151
            +N LL  Y PF+GL +LA LRGLV CS+K
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLVTCSTK 149

The following BLAST results are available for this feature:

BLAST of Carg19075 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930653.1	1.3e-84	100.00	sigma intracellular receptor 2-like [Cucurbita moschata] >KAG7022872.1 Transmemb...	[more]
KAG6589170.1	6.7e-84	99.40	Sigma intracellular receptor 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022988976.1	2.6e-80	95.78	sigma intracellular receptor 2-like [Cucurbita maxima]	[more]
XP_023530196.1	4.2e-78	93.37	sigma intracellular receptor 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022952624.1	4.8e-66	78.31	sigma intracellular receptor 2-like [Cucurbita moschata]	[more]

BLAST of Carg19075 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DFQ5	5.2e-07	25.32	Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1	[more]

BLAST of Carg19075 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EVW1	6.5e-85	100.00	sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC11143705...	[more]
A0A6J1JIQ0	1.3e-80	95.78	sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486176 ...	[more]
A0A6J1GM86	2.3e-66	78.31	sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC11145525...	[more]
A0A6J1HVX1	2.0e-65	77.71	sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468330 ...	[more]
A0A0A0K5K2	5.9e-62	74.70	EXPERA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044230 PE=4...	[more]

BLAST of Carg19075 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32380.1	8.0e-43	52.38	Transmembrane protein 97, predicted	[more]
AT1G05210.1	1.0e-42	56.67	Transmembrane protein 97, predicted	[more]
AT1G05220.1	1.2e-35	50.00	Transmembrane protein 97, predicted	[more]
AT1G05220.2	1.2e-35	50.00	Transmembrane protein 97, predicted	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016964	Sigma intracellular receptor 2	PIRSF	PIRSF031032	TMP_97	coord: 1..155 e-value: 2.0E-31 score: 106.8
None	No IPR available	PFAM	PF05241	EBP	coord: 42..133 e-value: 1.5E-14 score: 54.3
None	No IPR available	PANTHER	PTHR31204:SF6	SUBFAMILY NOT NAMED	coord: 1..166
None	No IPR available	PANTHER	PTHR31204	SIGMA INTRACELLULAR RECEPTOR 2	coord: 1..166
IPR033118	EXPERA domain	PROSITE	PS51751	EXPERA	coord: 8..140 score: 14.954025

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19075-RA	Carg19075-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane