Carg19056 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATATATATATATATATAAATAAATAAATTAGTCTTTAAAAAAAAAATACTAAACCAACCAAGTACCCTCCAAAATCGTTTTCCATATTTTCTCTCTTTGCGATCTGAGCTCCGCCCTCAATTCTTTGTCGGCGAGGTTATGGTTTGCGCCGATTCCGACCAAACAGTACTTGACTCCATGGCGATGGGACTGGAGAGATCGAAGCAGCTCCACAATTTCACCCTCCCTTTCTTAAAGTGGGGAAATCAGAAGTATCTCCGCTGTACGAAACTGGATTCCGATTGCGCCGACGCCGACGCCGACGTTCCTCCGCCAGCCGATCGCCGATCGTCGGCCGTCCGGTGGAACTGTCGGAAGTTTCAGACGGACAGGCCGCTGTGGTTGAAGGATTCCGCTAAGAGACCTAGGGCTTCAAAGTCCAAGATCCACGATAATTGCGACGGCGATGAAGGTATAGCGGCGGTGAGAGAGAAACTCATGATTGATCTAAAAACCGCCGCCGATAAGATGAAGGTTGCATTCTGGAGAGATGGAGTCGTGGATGACGAAGACGAACCGGAGAAAAAGACTCCGGCGGCGCCGGTGCCGGCGCCGTCGCCGGATAAGGATTCGAAACCGTGGAGTTTGAGGGTGAAGAAGACGGCATCGAAGACTCCGATTGATACAGTTACCGAAGGGAGAAGCGGTGAGAAGGCCTTGAAAATCAATAAGAGGTTAGATAAGCGGCCGATTCGAAACTCTCCGTTGAGAAGCGGTGATGGCGGCGGCGGCGTGAAGTCTCCAGGACGGCGATTGGTAATGGAAAAGAAAGAAAGGGAGAAATTCTCGGTATCGCTTTCCAAAAAGGAGATCGAGGAGGATTTCATGGCTATGGTGGAACGCAGGCCGCCGCGAAGGCCCAAAAAGAGGCCCAGAAATGTTCAAAATCAAATCGATGTAGGGTTCTTCTTCTTCTCCCCCTCCTTTTTCATCGTAACCTTTTCATCTTCTTCGAAATCGAGTTTTCAACTCTGTCATTCTCCATTGCAGACGCTCTTCCCCGGAGCATGGTTGACGGAGATAACCGCCGATCTTTACGACGTACCGGAAATCCAGAAAATCGAAAAGGTATTTTCCGGCCAGCGGCCGCCTTAAGTTTTCTTTAGGTTTAAATGTACGGATTACAAATCCGATCAAATCAATCTTCCATTTCTCAAATTAAGAACAATCCTCTCAATATTCGATCTAGTTTCGTTCGAATATCGTTTCAATTTCCGAAAATTTCCGCTCATATTCCTGCTAATTGAATCTGCAGAGGTAGTACCGAAACCTAATAGACGGAATCCTTAGAATCTAAACCTCCGGCCAGAAACTCGCGATGCTCTGCTAAACTAATCCATGGACGACGACGACGACGACGACGAAGACGACGACCGACCGACGGACCGAGCTCCATCATCTGAAATGGTGAAATCGAGTAGAAATCTGAGATTTGGATTGAATGTTGAATTCCATAGCTCTGAAAAACGCTAATTCTTGTGTATTAATTATAATTACATTTCATTATAGTCTTGGTTCTTTCTTCTGAATAAAGAACAATAAGGATTAGTCGAAAAAGATAGCACAATTTCTTTGTTGATTCTGAGCTGCTGCTGATAAGATCCAATTAAGTTCATCTCTGATCTCTGTATAATGTTTTCCATTAAAGAAGAACTTAATATCTGAGGTGCGGCTGGGTTCCCGGAGCCATGGACTCGATTAATATACGCAGTGGGTCAGGTCGGGTTGGGTTAATCGGAGGAGTTTGGCAGATGGGTGCCAGTTGGTGTTGAATTCTTCCTCCGTGGCGTTCTGCCCTTGCTTCTTTGATACACTGGTTTACATGTGGACAAAATTTA ATATATATATATATATATAAATAAATAAATTAGTCTTTAAAAAAAAAATACTAAACCAACCAAGTACCCTCCAAAATCGTTTTCCATATTTTCTCTCTTTGCGATCTGAGCTCCGCCCTCAATTCTTTGTCGGCGAGGTTATGGTTTGCGCCGATTCCGACCAAACAGTACTTGACTCCATGGCGATGGGACTGGAGAGATCGAAGCAGCTCCACAATTTCACCCTCCCTTTCTTAAAGTGGGGAAATCAGAAGTATCTCCGCTGTACGAAACTGGATTCCGATTGCGCCGACGCCGACGCCGACGTTCCTCCGCCAGCCGATCGCCGATCGTCGGCCGTCCGGTGGAACTGTCGGAAGTTTCAGACGGACAGGCCGCTGTGGTTGAAGGATTCCGCTAAGAGACCTAGGGCTTCAAAGTCCAAGATCCACGATAATTGCGACGGCGATGAAGGTATAGCGGCGGTGAGAGAGAAACTCATGATTGATCTAAAAACCGCCGCCGATAAGATGAAGGTTGCATTCTGGAGAGATGGAGTCGTGGATGACGAAGACGAACCGGAGAAAAAGACTCCGGCGGCGCCGGTGCCGGCGCCGTCGCCGGATAAGGATTCGAAACCGTGGAGTTTGAGGGTGAAGAAGACGGCATCGAAGACTCCGATTGATACAGTTACCGAAGGGAGAAGCGGTGAGAAGGCCTTGAAAATCAATAAGAGGTTAGATAAGCGGCCGATTCGAAACTCTCCGTTGAGAAGCGGTGATGGCGGCGGCGGCGTGAAGTCTCCAGGACGGCGATTGGTAATGGAAAAGAAAGAAAGGGAGAAATTCTCGGTATCGCTTTCCAAAAAGGAGATCGAGGAGGATTTCATGGCTATGGTGGAACGCAGGCCGCCGCGAAGGCCCAAAAAGAGGCCCAGAAATGTTCAAAATCAAATCGATACGCTCTTCCCCGGAGCATGGTTGACGGAGATAACCGCCGATCTTTACGACGTACCGGAAATCCAGAAAATCGAAAAGAGGTAGTACCGAAACCTAATAGACGGAATCCTTAGAATCTAAACCTCCGGCCAGAAACTCGCGATGCTCTGCTAAACTAATCCATGGACGACGACGACGACGACGACGAAGACGACGACCGACCGACGGACCGAGCTCCATCATCTGAAATGGTGAAATCGAGTAGAAATCTGAGATTTGGATTGAATGTTGAATTCCATAGCTCTGAAAAACGCTAATTCTTGTGTATTAATTATAATTACATTTCATTATAGTCTTGGTTCTTTCTTCTGAATAAAGAACAATAAGGATTAGTCGAAAAAGATAGCACAATTTCTTTGTTGATTCTGAGCTGCTGCTGATAAGATCCAATTAAGTTCATCTCTGATCTCTGTATAATGTTTTCCATTAAAGAAGAACTTAATATCTGAGGTGCGGCTGGGTTCCCGGAGCCATGGACTCGATTAATATACGCAGTGGGTCAGGTCGGGTTGGGTTAATCGGAGGAGTTTGGCAGATGGGTGCCAGTTGGTGTTGAATTCTTCCTCCGTGGCGTTCTGCCCTTGCTTCTTTGATACACTGGTTTACATGTGGACAAAATTTA ATGGTTTGCGCCGATTCCGACCAAACAGTACTTGACTCCATGGCGATGGGACTGGAGAGATCGAAGCAGCTCCACAATTTCACCCTCCCTTTCTTAAAGTGGGGAAATCAGAAGTATCTCCGCTGTACGAAACTGGATTCCGATTGCGCCGACGCCGACGCCGACGTTCCTCCGCCAGCCGATCGCCGATCGTCGGCCGTCCGGTGGAACTGTCGGAAGTTTCAGACGGACAGGCCGCTGTGGTTGAAGGATTCCGCTAAGAGACCTAGGGCTTCAAAGTCCAAGATCCACGATAATTGCGACGGCGATGAAGGTATAGCGGCGGTGAGAGAGAAACTCATGATTGATCTAAAAACCGCCGCCGATAAGATGAAGGTTGCATTCTGGAGAGATGGAGTCGTGGATGACGAAGACGAACCGGAGAAAAAGACTCCGGCGGCGCCGGTGCCGGCGCCGTCGCCGGATAAGGATTCGAAACCGTGGAGTTTGAGGGTGAAGAAGACGGCATCGAAGACTCCGATTGATACAGTTACCGAAGGGAGAAGCGGTGAGAAGGCCTTGAAAATCAATAAGAGGTTAGATAAGCGGCCGATTCGAAACTCTCCGTTGAGAAGCGGTGATGGCGGCGGCGGCGTGAAGTCTCCAGGACGGCGATTGGTAATGGAAAAGAAAGAAAGGGAGAAATTCTCGGTATCGCTTTCCAAAAAGGAGATCGAGGAGGATTTCATGGCTATGGTGGAACGCAGGCCGCCGCGAAGGCCCAAAAAGAGGCCCAGAAATGTTCAAAATCAAATCGATACGCTCTTCCCCGGAGCATGGTTGACGGAGATAACCGCCGATCTTTACGACGTACCGGAAATCCAGAAAATCGAAAAGAGGTAG MVCADSDQTVLDSMAMGLERSKQLHNFTLPFLKWGNQKYLRCTKLDSDCADADADVPPPADRRSSAVRWNCRKFQTDRPLWLKDSAKRPRASKSKIHDNCDGDEGIAAVREKLMIDLKTAADKMKVAFWRDGVVDDEDEPEKKTPAAPVPAPSPDKDSKPWSLRVKKTASKTPIDTVTEGRSGEKALKINKRLDKRPIRNSPLRSGDGGGGVKSPGRRLVMEKKEREKFSVSLSKKEIEEDFMAMVERRPPRRPKKRPRNVQNQIDTLFPGAWLTEITADLYDVPEIQKIEKR Homology
BLAST of Carg19056 vs. NCBI nr
Match: KAG6573950.1 (hypothetical protein SDJN03_27837, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013013.1 hypothetical protein SDJN02_25768 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 588.6 bits (1516), Expect = 3.0e-164 Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0
BLAST of Carg19056 vs. NCBI nr
Match: XP_022945220.1 (uncharacterized protein LOC111449526 [Cucurbita moschata]) HSP 1 Score: 587.4 bits (1513), Expect = 6.7e-164 Identity = 292/293 (99.66%), Postives = 293/293 (100.00%), Query Frame = 0
BLAST of Carg19056 vs. NCBI nr
Match: XP_023541633.1 (uncharacterized protein LOC111801737 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 583.9 bits (1504), Expect = 7.5e-163 Identity = 293/294 (99.66%), Postives = 293/294 (99.66%), Query Frame = 0
BLAST of Carg19056 vs. NCBI nr
Match: XP_022968125.1 (uncharacterized protein LOC111467454 [Cucurbita maxima]) HSP 1 Score: 571.2 bits (1471), Expect = 5.0e-159 Identity = 287/293 (97.95%), Postives = 288/293 (98.29%), Query Frame = 0
BLAST of Carg19056 vs. NCBI nr
Match: KAA0034568.1 (acyl-acyl carrier protein thioesterase ATL3 [Cucumis melo var. makuwa]) HSP 1 Score: 449.9 bits (1156), Expect = 1.7e-122 Identity = 238/310 (76.77%), Postives = 258/310 (83.23%), Query Frame = 0
BLAST of Carg19056 vs. ExPASy TrEMBL
Match: A0A6J1G0B5 (uncharacterized protein LOC111449526 OS=Cucurbita moschata OX=3662 GN=LOC111449526 PE=4 SV=1) HSP 1 Score: 587.4 bits (1513), Expect = 3.3e-164 Identity = 292/293 (99.66%), Postives = 293/293 (100.00%), Query Frame = 0
BLAST of Carg19056 vs. ExPASy TrEMBL
Match: A0A6J1HWB2 (uncharacterized protein LOC111467454 OS=Cucurbita maxima OX=3661 GN=LOC111467454 PE=4 SV=1) HSP 1 Score: 571.2 bits (1471), Expect = 2.4e-159 Identity = 287/293 (97.95%), Postives = 288/293 (98.29%), Query Frame = 0
BLAST of Carg19056 vs. ExPASy TrEMBL
Match: A0A5A7SVA0 (Acyl-acyl carrier protein thioesterase ATL3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G005840 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 8.1e-123 Identity = 238/310 (76.77%), Postives = 258/310 (83.23%), Query Frame = 0
BLAST of Carg19056 vs. ExPASy TrEMBL
Match: A0A5D3CCR4 (Acyl-acyl carrier protein thioesterase ATL3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001110 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 8.1e-123 Identity = 238/310 (76.77%), Postives = 258/310 (83.23%), Query Frame = 0
BLAST of Carg19056 vs. ExPASy TrEMBL
Match: A0A1S3BFG7 (uncharacterized protein LOC103489295 OS=Cucumis melo OX=3656 GN=LOC103489295 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 8.1e-123 Identity = 238/310 (76.77%), Postives = 258/310 (83.23%), Query Frame = 0
BLAST of Carg19056 vs. TAIR 10
Match: AT1G25370.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 139.0 bits (349), Expect = 5.9e-33 Identity = 108/280 (38.57%), Postives = 149/280 (53.21%), Query Frame = 0
BLAST of Carg19056 vs. TAIR 10
Match: AT1G68340.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 126.7 bits (317), Expect = 3.0e-29 Identity = 98/282 (34.75%), Postives = 140/282 (49.65%), Query Frame = 0
BLAST of Carg19056 vs. TAIR 10
Match: AT3G18295.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 126.3 bits (316), Expect = 4.0e-29 Identity = 94/269 (34.94%), Postives = 134/269 (49.81%), Query Frame = 0
BLAST of Carg19056 vs. TAIR 10
Match: AT1G48770.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 94.0 bits (232), Expect = 2.2e-19 Identity = 81/267 (30.34%), Postives = 116/267 (43.45%), Query Frame = 0
BLAST of Carg19056 vs. TAIR 10
Match: AT3G60410.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 71.6 bits (174), Expect = 1.2e-12 Identity = 48/132 (36.36%), Postives = 73/132 (55.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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