Carg19045 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19045
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Auxin-responsive protein
Location	Carg_Chr18: 9969195 .. 9969949 (+)
RNA-Seq Expression	Carg19045
Synteny	Carg19045

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCCTTATGCTCATCAAGATATAGACTTGGGGCTCAGCCTCAGAGCTTTGCAGCCTCAGCATCATCCCCGACCACGACCACATTGTGAGATGCTTTGTTTTGTTTTGTTTTTTTGTTGGGTTTTGTTGCTGATTCAAGGTTGTTTTGAAGCGATGAATTGGGCGGCGGTGGCGGTGGCGGGGGCGGCTCAGCTGTCGGATCTCTACAAGAAGGGAGAAGAGTGTGAGGAAGAGGCGGAGGTGGTGCAGAGCAAACGGAGGCGGGGTTATGTGAAAGTGAATATGGATGGTGTCATTGTTGGCAGGAAAGTTTGCATCTTTGAACATGGTTACTATTCTAGTCTTGCCCTTCAGCTCGAAGACATGTTTGGTATGTACGGATATGTCTCAAAATTTACGGTGATTGTCCATCATCTCGAAAAATTAGACAAACTTCTAACGTGTATGTTTTATGTTGTTCTATCAGGTCGACGATGTGAATTTGGATTGAAGCTATTCGAGACAGAATCTGAATTCTCTTTGTTCTACAAAGATGGAGATGAGAATTGGAGGAGTGTCGGTGACGTTCCATGGAAGTAAGTTCCTCTCGTGTCGTTATCAATCATATATTTGTTAGTTGACTCGTCTCGTTAATAGTAACGATCAACTCTTCTCTCATTCGGTTTACTTTGGACAGGCAATTCGTAGAAGACGTGACGAGGCTAAGAATTGCTCGGAAAGACGAGGCTTTTGTTGTCCTTCATCAAAATTAG

mRNA sequence

ATGGACCCTTATGCTCATCAAGATATAGACTTGGGGCTCAGCCTCAGAGCTTTGCAGCCTCAGCATCATCCCCGACCACGACCACATTGTGAGATGCTTTGTTTTGTTTTGTTTTTTTGTTGGGTTTTGTTGCTGATTCAAGGTTGTTTTGAAGCGATGAATTGGGCGGCGGTGGCGGTGGCGGGGGCGGCTCAGCTGTCGGATCTCTACAAGAAGGGAGAAGAGTGTGAGGAAGAGGCGGAGGTGGTGCAGAGCAAACGGAGGCGGGGTTATGTGAAAGTGAATATGGATGGTGTCATTGTTGGCAGGAAAGTTTGCATCTTTGAACATGGTTACTATTCTAGTCTTGCCCTTCAGCTCGAAGACATGTTTGGTCGACGATGTGAATTTGGATTGAAGCTATTCGAGACAGAATCTGAATTCTCTTTGTTCTACAAAGATGGAGATGAGAATTGGAGGAGTGTCGGTGACGTTCCATGGAAGCAATTCGTAGAAGACGTGACGAGGCTAAGAATTGCTCGGAAAGACGAGGCTTTTGTTGTCCTTCATCAAAATTAG

Coding sequence (CDS)

ATGGACCCTTATGCTCATCAAGATATAGACTTGGGGCTCAGCCTCAGAGCTTTGCAGCCTCAGCATCATCCCCGACCACGACCACATTGTGAGATGCTTTGTTTTGTTTTGTTTTTTTGTTGGGTTTTGTTGCTGATTCAAGGTTGTTTTGAAGCGATGAATTGGGCGGCGGTGGCGGTGGCGGGGGCGGCTCAGCTGTCGGATCTCTACAAGAAGGGAGAAGAGTGTGAGGAAGAGGCGGAGGTGGTGCAGAGCAAACGGAGGCGGGGTTATGTGAAAGTGAATATGGATGGTGTCATTGTTGGCAGGAAAGTTTGCATCTTTGAACATGGTTACTATTCTAGTCTTGCCCTTCAGCTCGAAGACATGTTTGGTCGACGATGTGAATTTGGATTGAAGCTATTCGAGACAGAATCTGAATTCTCTTTGTTCTACAAAGATGGAGATGAGAATTGGAGGAGTGTCGGTGACGTTCCATGGAAGCAATTCGTAGAAGACGTGACGAGGCTAAGAATTGCTCGGAAAGACGAGGCTTTTGTTGTCCTTCATCAAAATTAG

Protein sequence

MDPYAHQDIDLGLSLRALQPQHHPRPRPHCEMLCFVLFFCWVLLLIQGCFEAMNWAAVAVAGAAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSSLALQLEDMFGRRCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARKDEAFVVLHQN

Homology

[Close]

BLAST of Carg19045 vs. NCBI nr
Match: KAG7013002.1 (Auxin-responsive protein IAA32, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 388.3 bits (996), Expect = 3.8e-104
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MDPYAHQDIDLGLSLRALQPQHHPRPRPHCEMLCFVLFFCWVLLLIQGCFEAMNWAAVAV 60
           MDPYAHQDIDLGLSLRALQPQHHPRPRPHCEMLCFVLFFCWVLLLIQGCFEAMNWAAVAV
Sbjct: 1   MDPYAHQDIDLGLSLRALQPQHHPRPRPHCEMLCFVLFFCWVLLLIQGCFEAMNWAAVAV 60

Query: 61  AGAAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSSLALQL 120
           AGAAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSSLALQL
Sbjct: 61  AGAAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSSLALQL 120

Query: 121 EDMFGRRCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARKDEAFV 180
           EDMFGRRCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARKDEAFV
Sbjct: 121 EDMFGRRCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARKDEAFV 180

Query: 181 VLHQN 186
           VLHQN
Sbjct: 181 VLHQN 185

[Close]

BLAST of Carg19045 vs. NCBI nr
Match: KAG6573937.1 (Auxin-responsive protein IAA32, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 366.3 bits (939), Expect = 1.5e-97
Identity = 177/185 (95.68%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 1   MDPYAHQDIDLGLSLRALQPQHHPRPRPHCEMLCFVLFFCWVLLLIQGCFEAMNWAAVAV 60
           MDPYAHQDIDLGLSLRALQPQHHPRPRP CEMLCFVLFFCWVLLLIQGCFEAMNWAA   
Sbjct: 1   MDPYAHQDIDLGLSLRALQPQHHPRPRPQCEMLCFVLFFCWVLLLIQGCFEAMNWAA--- 60

Query: 61  AGAAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSSLALQL 120
           A AAQL DLYKKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSSLALQL
Sbjct: 61  AAAAQLLDLYKKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSSLALQL 120

Query: 121 EDMFGRRCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARKDEAFV 180
           EDMFGR+CEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVE VTRLRIARKDEAFV
Sbjct: 121 EDMFGRQCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEGVTRLRIARKDEAFV 180

Query: 181 VLHQN 186
           VLHQN
Sbjct: 181 VLHQN 182

[Close]

BLAST of Carg19045 vs. NCBI nr
Match: XP_022945718.1 (auxin-responsive protein IAA32-like [Cucurbita moschata])

HSP 1 Score: 301.2 bits (770), Expect = 6.1e-78
Identity = 154/190 (81.05%), Postives = 158/190 (83.16%), Query Frame = 0


Query: 1   MDPYAHQD-----IDLGLSLRALQPQHHPRPRPHCEMLCFVLFFCWVLLLIQGCFEAMNW 60
           MDPYAHQ+     IDLGLSLRALQPQHHP PRPH                      +MNW
Sbjct: 1   MDPYAHQEDHDHLIDLGLSLRALQPQHHPLPRPH----------------------SMNW 60

Query: 61  AAVAVAGAAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSS 120
           A  AVA AAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDG+IVGRKVCIFEHGYYSS
Sbjct: 61  A--AVAAAAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDGIIVGRKVCIFEHGYYSS 120

Query: 121 LALQLEDMFGRRCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARK 180
           LALQLEDMFGR+CEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVE VTRLRIARK
Sbjct: 121 LALQLEDMFGRQCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEGVTRLRIARK 166

Query: 181 DEAFVVLHQN 186
           DEAFVVLHQN
Sbjct: 181 DEAFVVLHQN 166

[Close]

BLAST of Carg19045 vs. NCBI nr
Match: XP_022968137.1 (auxin-responsive protein IAA32-like [Cucurbita maxima])

HSP 1 Score: 295.0 bits (754), Expect = 4.4e-76
Identity = 150/190 (78.95%), Postives = 155/190 (81.58%), Query Frame = 0


Query: 1   MDPYAHQD-----IDLGLSLRALQPQHHPRPRPHCEMLCFVLFFCWVLLLIQGCFEAMNW 60
           MDPYAHQ+     IDLGLSLRALQPQHHPRPRPH                      +MNW
Sbjct: 1   MDPYAHQEDHDHLIDLGLSLRALQPQHHPRPRPH----------------------SMNW 60

Query: 61  AAVAVAGAAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSS 120
               VA AAQLSDLY+KGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYS 
Sbjct: 61  ----VAAAAQLSDLYQKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSG 120

Query: 121 LALQLEDMFGRRCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARK 180
           LALQLEDMFGR+CEFGLKLFETESEFSLFYKDGDENWRSV D+PWKQFVE VTRLRIARK
Sbjct: 121 LALQLEDMFGRQCEFGLKLFETESEFSLFYKDGDENWRSVSDIPWKQFVEGVTRLRIARK 164

Query: 181 DEAFVVLHQN 186
           DEAFVVLHQN
Sbjct: 181 DEAFVVLHQN 164

[Close]

BLAST of Carg19045 vs. NCBI nr
Match: XP_023542963.1 (auxin-responsive protein IAA32-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 252.7 bits (644), Expect = 2.5e-63
Identity = 124/133 (93.23%), Postives = 127/133 (95.49%), Query Frame = 0


Query: 53  MNWAAVAVAGAAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGY 112
           MNW+A     AAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIF+HGY
Sbjct: 1   MNWSA-----AAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFQHGY 60

Query: 113 YSSLALQLEDMFGRRCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRI 172
           YSSLALQLEDMFGR+CEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVE VTRLRI
Sbjct: 61  YSSLALQLEDMFGRQCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEGVTRLRI 120

Query: 173 ARKDEAFVVLHQN 186
           ARKDEAFVVLHQN
Sbjct: 121 ARKDEAFVVLHQN 128

[Close]

BLAST of Carg19045 vs. ExPASy Swiss-Prot
Match: Q8RYC6 (Auxin-responsive protein IAA32 OS=Arabidopsis thaliana OX=3702 GN=IAA32 PE=1 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 2.9e-30
Identity = 74/179 (41.34%), Postives = 108/179 (60.34%), Query Frame = 0


Query: 9   IDLGLSLRALQPQHHPRPRPHCEMLCFVLFFCWVLLLIQGCFEAMNWAAVAVAGAAQLSD 68
           IDLGLSLR +Q + +  P                ++ + G  E ++W+  +     QL  
Sbjct: 30  IDLGLSLRTIQHETYLPPAR--------------MIGLDGYGELIDWSQPSYNSITQL-- 89

Query: 69  LYKKGEECEEEA-------EVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSSLALQLE 128
              K E+   +           +S+ +  YVKVN+DG++VGRKVC+ + G Y++LALQL 
Sbjct: 90  ---KSEDTGHQRLAQGYYNNEGESRGKYAYVKVNLDGLVVGRKVCLVDQGAYATLALQLN 149

Query: 129 DMFGRRCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARKDEAFV 181
           DMFG +   GL+LF+TESEFSL Y+D +  WR+VGDVPWK+FVE V R+RIAR+++A +
Sbjct: 150 DMFGMQTVSGLRLFQTESEFSLVYRDREGIWRNVGDVPWKEFVESVDRMRIARRNDALL 189

[Close]

BLAST of Carg19045 vs. ExPASy Swiss-Prot
Match: Q9C5X0 (Auxin-responsive protein IAA34 OS=Arabidopsis thaliana OX=3702 GN=IAA34 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 7.8e-28
Identity = 55/93 (59.14%), Postives = 73/93 (78.49%), Query Frame = 0


Query: 86  KRRRGYVKVNMDGVIVGRKVCIFEHGYYSSLALQLEDMFGRRCEFGLKLFETESEFSLFY 145
           +R+ GYVKV MDG++VGRKVC+ +HG YS+LA QLEDMFG +   GL+LF+ ESEF L Y
Sbjct: 89  RRKWGYVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVSGLRLFQMESEFCLVY 148

Query: 146 KDGDENWRSVGDVPWKQFVEDVTRLRIARKDEA 179
           +D +  WR+ GDVPW +F+E V RLRI R+++A
Sbjct: 149 RDEEGLWRNAGDVPWNEFIESVERLRITRRNDA 181

[Close]

BLAST of Carg19045 vs. ExPASy Swiss-Prot
Match: Q38831 (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 2.1e-17
Identity = 49/117 (41.88%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 72  KGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSSLALQLEDMF------- 131
           K +E ++  + V  K + G++KVNMDGV +GRKV +  H  Y +LA  LEDMF       
Sbjct: 112 KDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGT 171

Query: 132 -GRRCEF--GLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARKDEA 179
            G   +F   L+L +  SEF L Y+D + +W  VGDVPW+ F+  V RLR+ +  EA
Sbjct: 172 VGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEA 228

[Close]

BLAST of Carg19045 vs. ExPASy Swiss-Prot
Match: A2XB18 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 2.8e-17
Identity = 53/124 (42.74%), Postives = 69/124 (55.65%), Query Frame = 0


Query: 63  AAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSSLALQLED 122
           A   SD+ K  EE E++  V       G+VKVNMDG ++GRKV +  H  Y +LAL LE 
Sbjct: 143 ATNESDVQKDKEEGEKKGRVA------GWVKVNMDGEVIGRKVDLNAHRSYKTLALALEL 202

Query: 123 MFGR--------RCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIAR 179
           MF +             LKL +  +E+ L Y+D D +W  VGDVPW+ FV  V RLRI R
Sbjct: 203 MFTKPSIGLCASHNTNSLKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMR 260

[Close]

BLAST of Carg19045 vs. ExPASy Swiss-Prot
Match: Q0DWF2 (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10 PE=2 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 2.8e-17
Identity = 53/124 (42.74%), Postives = 69/124 (55.65%), Query Frame = 0


Query: 63  AAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSSLALQLED 122
           A   SD+ K  EE E++  V       G+VKVNMDG ++GRKV +  H  Y +LAL LE 
Sbjct: 143 ATNESDVQKDKEEGEKKGRVA------GWVKVNMDGEVIGRKVDLNAHRSYKTLALALEL 202

Query: 123 MFGR--------RCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIAR 179
           MF +             LKL +  +E+ L Y+D D +W  VGDVPW+ FV  V RLRI R
Sbjct: 203 MFTKPSIGLCASHNTNSLKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMR 260

[Close]

BLAST of Carg19045 vs. ExPASy TrEMBL
Match: A0A6J1G1P4 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111449860 PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.0e-78
Identity = 154/190 (81.05%), Postives = 158/190 (83.16%), Query Frame = 0


Query: 1   MDPYAHQD-----IDLGLSLRALQPQHHPRPRPHCEMLCFVLFFCWVLLLIQGCFEAMNW 60
           MDPYAHQ+     IDLGLSLRALQPQHHP PRPH                      +MNW
Sbjct: 1   MDPYAHQEDHDHLIDLGLSLRALQPQHHPLPRPH----------------------SMNW 60

Query: 61  AAVAVAGAAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSS 120
           A  AVA AAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDG+IVGRKVCIFEHGYYSS
Sbjct: 61  A--AVAAAAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDGIIVGRKVCIFEHGYYSS 120

Query: 121 LALQLEDMFGRRCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARK 180
           LALQLEDMFGR+CEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVE VTRLRIARK
Sbjct: 121 LALQLEDMFGRQCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEGVTRLRIARK 166

Query: 181 DEAFVVLHQN 186
           DEAFVVLHQN
Sbjct: 181 DEAFVVLHQN 166

[Close]

BLAST of Carg19045 vs. ExPASy TrEMBL
Match: A0A6J1HSU2 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111467463 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.1e-76
Identity = 150/190 (78.95%), Postives = 155/190 (81.58%), Query Frame = 0


Query: 1   MDPYAHQD-----IDLGLSLRALQPQHHPRPRPHCEMLCFVLFFCWVLLLIQGCFEAMNW 60
           MDPYAHQ+     IDLGLSLRALQPQHHPRPRPH                      +MNW
Sbjct: 1   MDPYAHQEDHDHLIDLGLSLRALQPQHHPRPRPH----------------------SMNW 60

Query: 61  AAVAVAGAAQLSDLYKKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSS 120
               VA AAQLSDLY+KGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYS 
Sbjct: 61  ----VAAAAQLSDLYQKGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSG 120

Query: 121 LALQLEDMFGRRCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARK 180
           LALQLEDMFGR+CEFGLKLFETESEFSLFYKDGDENWRSV D+PWKQFVE VTRLRIARK
Sbjct: 121 LALQLEDMFGRQCEFGLKLFETESEFSLFYKDGDENWRSVSDIPWKQFVEGVTRLRIARK 164

Query: 181 DEAFVVLHQN 186
           DEAFVVLHQN
Sbjct: 181 DEAFVVLHQN 164

[Close]

BLAST of Carg19045 vs. ExPASy TrEMBL
Match: A0A6J1J6Y8 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111483950 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.8e-47
Identity = 97/113 (85.84%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 74  EECEEEAEVVQSKRRR-GYVKVNMDGVIVGRKVCIFEHGYYSSLALQLEDMFGRRCEFGL 133
           EE EE  EVVQSK++R  YVKVNMDGVIVGRKVCIF+HG YSSLALQLEDMFGR+CE GL
Sbjct: 89  EEEEEAEEVVQSKQQRWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGRQCESGL 148

Query: 134 KLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARKDEAFVVLHQN 186
           KLFE ESEFSLFYKDGDENWRSVGDVPWKQFVEDV RLRIARKDE FV +HQN
Sbjct: 149 KLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDEGFVAIHQN 201

[Close]

BLAST of Carg19045 vs. ExPASy TrEMBL
Match: A0A6J1GYJ4 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111458660 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.7e-46
Identity = 96/113 (84.96%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 74  EECEEEAEVVQSKRRR-GYVKVNMDGVIVGRKVCIFEHGYYSSLALQLEDMFGRRCEFGL 133
           EE EE  EVVQSK++R  YVKVNMDGVIVGRKVCIF+HG YS+LALQLEDMFGR+CE GL
Sbjct: 87  EEEEEAEEVVQSKQQRWAYVKVNMDGVIVGRKVCIFQHGSYSNLALQLEDMFGRQCESGL 146

Query: 134 KLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARKDEAFVVLHQN 186
           KLFE ESEFSLFYKDGDENWRSVGDVPWKQFVEDV RLRIARKDE FV +HQN
Sbjct: 147 KLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDEGFVAIHQN 199

[Close]

BLAST of Carg19045 vs. ExPASy TrEMBL
Match: A0A6J1JFN3 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111483950 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.5e-45
Identity = 97/115 (84.35%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 74  EECEEEAEVVQSKRRR-GYVKVNMDGVIVGRKVCIFEHGYYSSLALQLEDMF--GRRCEF 133
           EE EE  EVVQSK++R  YVKVNMDGVIVGRKVCIF+HG YSSLALQLEDMF  GR+CE 
Sbjct: 89  EEEEEAEEVVQSKQQRWAYVKVNMDGVIVGRKVCIFQHGSYSSLALQLEDMFGSGRQCES 148

Query: 134 GLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARKDEAFVVLHQN 186
           GLKLFE ESEFSLFYKDGDENWRSVGDVPWKQFVEDV RLRIARKDE FV +HQN
Sbjct: 149 GLKLFENESEFSLFYKDGDENWRSVGDVPWKQFVEDVKRLRIARKDEGFVAIHQN 203

[Close]

BLAST of Carg19045 vs. TAIR 10
Match: AT2G01200.2 (indole-3-acetic acid inducible 32 )

HSP 1 Score: 133.3 bits (334), Expect = 2.0e-31
Identity = 74/179 (41.34%), Postives = 108/179 (60.34%), Query Frame = 0


Query: 9   IDLGLSLRALQPQHHPRPRPHCEMLCFVLFFCWVLLLIQGCFEAMNWAAVAVAGAAQLSD 68
           IDLGLSLR +Q + +  P                ++ + G  E ++W+  +     QL  
Sbjct: 30  IDLGLSLRTIQHETYLPPAR--------------MIGLDGYGELIDWSQPSYNSITQL-- 89

Query: 69  LYKKGEECEEEA-------EVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSSLALQLE 128
              K E+   +           +S+ +  YVKVN+DG++VGRKVC+ + G Y++LALQL 
Sbjct: 90  ---KSEDTGHQRLAQGYYNNEGESRGKYAYVKVNLDGLVVGRKVCLVDQGAYATLALQLN 149

Query: 129 DMFGRRCEFGLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARKDEAFV 181
           DMFG +   GL+LF+TESEFSL Y+D +  WR+VGDVPWK+FVE V R+RIAR+++A +
Sbjct: 150 DMFGMQTVSGLRLFQTESEFSLVYRDREGIWRNVGDVPWKEFVESVDRMRIARRNDALL 189

[Close]

BLAST of Carg19045 vs. TAIR 10
Match: AT1G15050.1 (indole-3-acetic acid inducible 34 )

HSP 1 Score: 125.2 bits (313), Expect = 5.6e-29
Identity = 55/93 (59.14%), Postives = 73/93 (78.49%), Query Frame = 0


Query: 86  KRRRGYVKVNMDGVIVGRKVCIFEHGYYSSLALQLEDMFGRRCEFGLKLFETESEFSLFY 145
           +R+ GYVKV MDG++VGRKVC+ +HG YS+LA QLEDMFG +   GL+LF+ ESEF L Y
Sbjct: 89  RRKWGYVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMFGMQSVSGLRLFQMESEFCLVY 148

Query: 146 KDGDENWRSVGDVPWKQFVEDVTRLRIARKDEA 179
           +D +  WR+ GDVPW +F+E V RLRI R+++A
Sbjct: 149 RDEEGLWRNAGDVPWNEFIESVERLRITRRNDA 181

[Close]

BLAST of Carg19045 vs. TAIR 10
Match: AT2G33310.1 (auxin-induced protein 13 )

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-18
Identity = 49/117 (41.88%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 72  KGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSSLALQLEDMF------- 131
           K +E ++  + V  K + G++KVNMDGV +GRKV +  H  Y +LA  LEDMF       
Sbjct: 111 KDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGT 170

Query: 132 -GRRCEF--GLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARKDEA 179
            G   +F   L+L +  SEF L Y+D + +W  VGDVPW+ F+  V RLR+ +  EA
Sbjct: 171 VGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEA 227

[Close]

BLAST of Carg19045 vs. TAIR 10
Match: AT2G33310.2 (auxin-induced protein 13 )

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-18
Identity = 49/117 (41.88%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 72  KGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSSLALQLEDMF------- 131
           K +E ++  + V  K + G++KVNMDGV +GRKV +  H  Y +LA  LEDMF       
Sbjct: 112 KDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGT 171

Query: 132 -GRRCEF--GLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARKDEA 179
            G   +F   L+L +  SEF L Y+D + +W  VGDVPW+ F+  V RLR+ +  EA
Sbjct: 172 VGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEA 228

[Close]

BLAST of Carg19045 vs. TAIR 10
Match: AT2G33310.3 (auxin-induced protein 13 )

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-18
Identity = 49/117 (41.88%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 72  KGEECEEEAEVVQSKRRRGYVKVNMDGVIVGRKVCIFEHGYYSSLALQLEDMF------- 131
           K +E ++  + V  K + G++KVNMDGV +GRKV +  H  Y +LA  LEDMF       
Sbjct: 111 KDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGT 170

Query: 132 -GRRCEF--GLKLFETESEFSLFYKDGDENWRSVGDVPWKQFVEDVTRLRIARKDEA 179
            G   +F   L+L +  SEF L Y+D + +W  VGDVPW+ F+  V RLR+ +  EA
Sbjct: 171 VGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEA 227

The following BLAST results are available for this feature:

BLAST of Carg19045 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013002.1	3.8e-104	100.00	Auxin-responsive protein IAA32, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
KAG6573937.1	1.5e-97	95.68	Auxin-responsive protein IAA32, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022945718.1	6.1e-78	81.05	auxin-responsive protein IAA32-like [Cucurbita moschata]	[more]
XP_022968137.1	4.4e-76	78.95	auxin-responsive protein IAA32-like [Cucurbita maxima]	[more]
XP_023542963.1	2.5e-63	93.23	auxin-responsive protein IAA32-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg19045 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RYC6	2.9e-30	41.34	Auxin-responsive protein IAA32 OS=Arabidopsis thaliana OX=3702 GN=IAA32 PE=1 SV=...	[more]
Q9C5X0	7.8e-28	59.14	Auxin-responsive protein IAA34 OS=Arabidopsis thaliana OX=3702 GN=IAA34 PE=1 SV=...	[more]
Q38831	2.1e-17	41.88	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=...	[more]
A2XB18	2.8e-17	42.74	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica OX=39946 GN=IAA10 P...	[more]
Q0DWF2	2.8e-17	42.74	Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA10...	[more]

BLAST of Carg19045 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G1P4	3.0e-78	81.05	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111449860 PE=3 SV=1	[more]
A0A6J1HSU2	2.1e-76	78.95	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111467463 PE=3 SV=1	[more]
A0A6J1J6Y8	7.8e-47	85.84	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111483950 PE=3 SV=1	[more]
A0A6J1GYJ4	1.7e-46	84.96	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111458660 PE=3 SV=1	[more]
A0A6J1JFN3	2.5e-45	84.35	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111483950 PE=3 SV=1	[more]

BLAST of Carg19045 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01200.2	2.0e-31	41.34	indole-3-acetic acid inducible 32	[more]
AT1G15050.1	5.6e-29	59.14	indole-3-acetic acid inducible 34	[more]
AT2G33310.1	1.5e-18	41.88	auxin-induced protein 13	[more]
AT2G33310.2	1.5e-18	41.88	auxin-induced protein 13	[more]
AT2G33310.3	1.5e-18	41.88	auxin-induced protein 13	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 77..179 e-value: 2.2E-20 score: 73.6
None	No IPR available	GENE3D	3.10.20.90		coord: 83..183 e-value: 1.5E-25 score: 91.1
None	No IPR available	PANTHER	PTHR31734:SF114	AUXIN-RESPONSIVE PROTEIN IAA34	coord: 7..180
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 91..172
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 7..180
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 89..177 score: 17.897453

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19045-RA	Carg19045-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding