Carg18858 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18858
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ethylene-responsive transcription factor RAP2-3
Location	Carg_Chr08: 7567725 .. 7568818 (+)
RNA-Seq Expression	Carg18858
Synteny	Carg18858

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCCAATCTGCGAAAGATGTGCGGCGGTGCACTCATCTCTGGGATTATAGAAAAAAAGCGCGGTCGGAAGCTTAGTAATGGATCTCTCTGGCCCGACACCGACCATTTTTCCGACCTCCTCGGCCTTGATTATTGTGCCCGTATATTGCGCTCTCTTTAATTTTTGTTTGTTTTTTTTTTAATTTAATATGTATTTTATTCGGATAATTTTAATATATATTTAAGAAATCCCGTTAGGGATATTGAACTGTGATTTGTTTACTGATTTTGTAGTGAAGACTGAGACATCTCAGAAAGAATGCCGAGCTACGGCGGTGCCGGAGCCGGAGAAGACTCGAAAAGCTCGGAAGAATATATACAGAGGAATCCGGCAGCGGCCGTGGGGGAAATGGGCGGCGGAGATTCGAGACCCACAAAAAGGCGTCAGAGTTTGGCTTGGCACTTTCAACACTGCCGAGGAAGCCGCCAGAGCCTACGATGAAGCGGCAAAAAGGATCCGAGGAGAAAAGGCTAAACTCAACTTCGCTCCTCGTCCGCAACCGTTACCGGTGTCGCAGCCTCCGGCTAAAAAGCGCTGCGTCGCTCATGAGTTAACTTCAGATTGTTTCAGTTCCACCAGTCCGGCGCCGGCGAGTACACGTGTGAATAACTCGTGTGAGATCGACGGGCTTTACTACGGCGAGGAATTGGCGAGTTTGAGATCTTTCTTGGATCTGGATTTTGAGGAAGAGCAACAACCGAGTCAAGTCGGTGGGAGCGATGAGTTTGGCCAAGCTGTGGAGCTGTGGATGATGGACGACCCGTCGTTGAATGAGGAGAAATTTGGTGAAGTGGTGTAACTGAGATAAACTCATTTGGTCCGACATGTCGTTTACTACTAAGTACTGGTGTAATATTTTATGTATTTTTGTTTCGACTTTTTGAGCTTAGTTTTGTAGATATACATAGATATAGGTTCAATAAAAAGCTTGTGATATGAAACTCGCTTGTGCCTTTTGCCTTCTTTCGTCTTTTGAAACGACATGTCGGTTCCTGTATCAGATCAGACTGCTTCTATTTTTAATATTCACCACGTTGAGTGGTTTGTGTGTT

mRNA sequence

CTCTCCAATCTGCGAAAGATGTGCGGCGGTGCACTCATCTCTGGGATTATAGAAAAAAAGCGCGGTCGGAAGCTTAGTAATGGATCTCTCTGGCCCGACACCGACCATTTTTCCGACCTCCTCGGCCTTGATTATTGTGCCCTGAAGACTGAGACATCTCAGAAAGAATGCCGAGCTACGGCGGTGCCGGAGCCGGAGAAGACTCGAAAAGCTCGGAAGAATATATACAGAGGAATCCGGCAGCGGCCGTGGGGGAAATGGGCGGCGGAGATTCGAGACCCACAAAAAGGCGTCAGAGTTTGGCTTGGCACTTTCAACACTGCCGAGGAAGCCGCCAGAGCCTACGATGAAGCGGCAAAAAGGATCCGAGGAGAAAAGGCTAAACTCAACTTCGCTCCTCGTCCGCAACCGTTACCGGTGTCGCAGCCTCCGGCTAAAAAGCGCTGCGTCGCTCATGAGTTAACTTCAGATTGTTTCAGTTCCACCAGTCCGGCGCCGGCGAGTACACGTGTGAATAACTCGTGTGAGATCGACGGGCTTTACTACGGCGAGGAATTGGCGAGTTTGAGATCTTTCTTGGATCTGGATTTTGAGGAAGAGCAACAACCGAGTCAAGTCGGTGGGAGCGATGAGTTTGGCCAAGCTGTGGAGCTGTGGATGATGGACGACCCGTCGTTGAATGAGGAGAAATTTGGTGAAGTGGTGTAACTGAGATAAACTCATTTGGTCCGACATGTCGTTTACTACTAAGTACTGGTGTAATATTTTATGTATTTTTGTTTCGACTTTTTGAGCTTAGTTTTGTAGATATACATAGATATAGGTTCAATAAAAAGCTTGTGATATGAAACTCGCTTGTGCCTTTTGCCTTCTTTCGTCTTTTGAAACGACATGTCGGTTCCTGTATCAGATCAGACTGCTTCTATTTTTAATATTCACCACGTTGAGTGGTTTGTGTGTT

Coding sequence (CDS)

ATGTGCGGCGGTGCACTCATCTCTGGGATTATAGAAAAAAAGCGCGGTCGGAAGCTTAGTAATGGATCTCTCTGGCCCGACACCGACCATTTTTCCGACCTCCTCGGCCTTGATTATTGTGCCCTGAAGACTGAGACATCTCAGAAAGAATGCCGAGCTACGGCGGTGCCGGAGCCGGAGAAGACTCGAAAAGCTCGGAAGAATATATACAGAGGAATCCGGCAGCGGCCGTGGGGGAAATGGGCGGCGGAGATTCGAGACCCACAAAAAGGCGTCAGAGTTTGGCTTGGCACTTTCAACACTGCCGAGGAAGCCGCCAGAGCCTACGATGAAGCGGCAAAAAGGATCCGAGGAGAAAAGGCTAAACTCAACTTCGCTCCTCGTCCGCAACCGTTACCGGTGTCGCAGCCTCCGGCTAAAAAGCGCTGCGTCGCTCATGAGTTAACTTCAGATTGTTTCAGTTCCACCAGTCCGGCGCCGGCGAGTACACGTGTGAATAACTCGTGTGAGATCGACGGGCTTTACTACGGCGAGGAATTGGCGAGTTTGAGATCTTTCTTGGATCTGGATTTTGAGGAAGAGCAACAACCGAGTCAAGTCGGTGGGAGCGATGAGTTTGGCCAAGCTGTGGAGCTGTGGATGATGGACGACCCGTCGTTGAATGAGGAGAAATTTGGTGAAGTGGTGTAA

Protein sequence

MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVPEPEKTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFAPRPQPLPVSQPPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYYGEELASLRSFLDLDFEEEQQPSQVGGSDEFGQAVELWMMDDPSLNEEKFGEVV

Homology

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BLAST of Carg18858 vs. NCBI nr
Match: KAG6593985.1 (Ethylene-responsive transcription factor RAP2-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026326.1 Ethylene-responsive transcription factor RAP2-3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 468.8 bits (1205), Expect = 2.7e-128
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVPEPE 60
           MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVPEPE
Sbjct: 1   MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVPEPE 60

Query: 61  KTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEK 120
           KTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEK
Sbjct: 61  KTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEK 120

Query: 121 AKLNFAPRPQPLPVSQPPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYYGEEL 180
           AKLNFAPRPQPLPVSQPPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYYGEEL
Sbjct: 121 AKLNFAPRPQPLPVSQPPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYYGEEL 180

Query: 181 ASLRSFLDLDFEEEQQPSQVGGSDEFGQAVELWMMDDPSLNEEKFGEVV 230
           ASLRSFLDLDFEEEQQPSQVGGSDEFGQAVELWMMDDPSLNEEKFGEVV
Sbjct: 181 ASLRSFLDLDFEEEQQPSQVGGSDEFGQAVELWMMDDPSLNEEKFGEVV 229

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BLAST of Carg18858 vs. NCBI nr
Match: XP_022930379.1 (ethylene-responsive transcription factor RAP2-3 [Cucurbita moschata])

HSP 1 Score: 464.5 bits (1194), Expect = 5.2e-127
Identity = 226/229 (98.69%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVPEPE 60
           MCGG+LISGIIEKKRGRKL NGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVPEPE
Sbjct: 1   MCGGSLISGIIEKKRGRKLRNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVPEPE 60

Query: 61  KTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEK 120
           KTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEK
Sbjct: 61  KTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEK 120

Query: 121 AKLNFAPRPQPLPVSQPPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYYGEEL 180
           AKLNFAPRPQPLPVSQPPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYYGEEL
Sbjct: 121 AKLNFAPRPQPLPVSQPPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYYGEEL 180

Query: 181 ASLRSFLDLDFEEEQQPSQVGGSDEFGQAVELWMMDDPSLNEEKFGEVV 230
           ASLRSFLDLDFEEEQ+PSQVGGSDEFGQAVELWMMDDPSLNEEKFGEVV
Sbjct: 181 ASLRSFLDLDFEEEQEPSQVGGSDEFGQAVELWMMDDPSLNEEKFGEVV 229

[Close]

BLAST of Carg18858 vs. NCBI nr
Match: XP_023514639.1 (ethylene-responsive transcription factor RAP2-3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 461.1 bits (1185), Expect = 5.7e-126
Identity = 228/233 (97.85%), Postives = 228/233 (97.85%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVPEPE 60
           MCGGALISGIIEKKRGRK SNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVPEPE
Sbjct: 1   MCGGALISGIIEKKRGRKYSNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVPEPE 60

Query: 61  KTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEK 120
           KTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEK
Sbjct: 61  KTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEK 120

Query: 121 AKLNFAPRPQPLPVSQPPAKKRCVAHELTSDCFSSTS----PAPASTRVNNSCEIDGLYY 180
           AKLNFAPRPQPLPVSQPPAKKRCVAHELTSDCFSSTS    PAPASTRVNNSCEIDGLYY
Sbjct: 121 AKLNFAPRPQPLPVSQPPAKKRCVAHELTSDCFSSTSSAPTPAPASTRVNNSCEIDGLYY 180

Query: 181 GEELASLRSFLDLDFEEEQQPSQVGGSDEFGQAVELWMMDDPSLNEEKFGEVV 230
           GEELASLRSFLDLDFEEEQQPSQVGGSDEFGQAVELWMMDDPSLNEEKFGEVV
Sbjct: 181 GEELASLRSFLDLDFEEEQQPSQVGGSDEFGQAVELWMMDDPSLNEEKFGEVV 233

[Close]

BLAST of Carg18858 vs. NCBI nr
Match: XP_023000151.1 (ethylene-responsive transcription factor RAP2-3 [Cucurbita maxima])

HSP 1 Score: 450.3 bits (1157), Expect = 1.0e-122
Identity = 223/233 (95.71%), Postives = 224/233 (96.14%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETSQKECRAT----AV 60
           MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTET QK+CRAT    AV
Sbjct: 1   MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETPQKKCRATAETAAV 60

Query: 61  PEPEKTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRI 120
           PEPEKTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRI
Sbjct: 61  PEPEKTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRI 120

Query: 121 RGEKAKLNFAPRPQPLPVSQPPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYY 180
           RGEKAKLNFAPRPQPLPVSQPPAKKRCVAHELT DCFSSTS APASTRVNNSCEIDGLYY
Sbjct: 121 RGEKAKLNFAPRPQPLPVSQPPAKKRCVAHELTPDCFSSTSSAPASTRVNNSCEIDGLYY 180

Query: 181 GEELASLRSFLDLDFEEEQQPSQVGGSDEFGQAVELWMMDDPSLNEEKFGEVV 230
           GEELASLRSFLDLDFEEEQQPSQVGGSDEFGQAVELWMMDDPSLNEEKF  VV
Sbjct: 181 GEELASLRSFLDLDFEEEQQPSQVGGSDEFGQAVELWMMDDPSLNEEKFSSVV 233

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BLAST of Carg18858 vs. NCBI nr
Match: XP_008458405.1 (PREDICTED: ethylene-responsive transcription factor RAP2-3-like [Cucumis melo])

HSP 1 Score: 290.8 bits (743), Expect = 1.0e-74
Identity = 158/236 (66.95%), Postives = 184/236 (77.97%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVP--- 60
           MCGGA+IS  IEK+R  KL+N SLW   D FSDLLGL+Y ++KTE  +K  R+TA     
Sbjct: 20  MCGGAIISDFIEKRRTCKLNNESLWSHIDPFSDLLGLNYSSVKTEKPKKRDRSTAAEAVA 79

Query: 61  -EPEKTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRI 120
              EKTRK RKN+YRGIRQRPWGKWAAEIRDP+KGVRVWLGTFNTAEEAARAYDEAAKRI
Sbjct: 80  VAVEKTRKVRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRI 139

Query: 121 RGEKAKLNFAPRPQPLPVSQP--PAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGL 180
           RG KAKLNFAP P P P +QP  P KK+CV  ELT   F++T  +P  TR ++SC+ + L
Sbjct: 140 RGVKAKLNFAPAP-PSPTAQPQTPVKKQCVLPELTPGGFNTTD-SPPCTRADSSCDSEEL 199

Query: 181 YYGEELASLRSFLDLDFEEEQQPSQVGGSDEFGQA-VELWMMDDPSLNEEKFGEVV 230
           YYGEELASLRSFL LD  EEQQPSQ+GG+ EF +  ++LWMMDD SLNEEKF ++V
Sbjct: 200 YYGEELASLRSFLGLD-GEEQQPSQLGGNGEFERVDLDLWMMDDMSLNEEKFSQLV 252

[Close]

BLAST of Carg18858 vs. ExPASy Swiss-Prot
Match: P42736 (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana OX=3702 GN=RAP2-3 PE=1 SV=2)

HSP 1 Score: 180.3 bits (456), Expect = 2.5e-44
Identity = 111/246 (45.12%), Postives = 142/246 (57.72%), Query Frame = 0


Query: 1   MCGGALISG---IIEKKRGRKLSNGSLWPDTDHFS--DLLGLDYCALKTETSQKECRATA 60
           MCGGA+IS    ++ K +GRKL+   LW + D  +  D  G    +    T+Q   +  A
Sbjct: 1   MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKLHPTNQVNVKEEA 60

Query: 61  VPEPEKT----RKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDE 120
           V + + T    R+ RKN+YRGIR+RPWGKWAAEIRDP+KGVRVWLGTFNTAEEAA AYD 
Sbjct: 61  VKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDV 120

Query: 121 AAKRIRGEKAKLNF------------APRPQPLPVSQPPAKKRCVAHELTSDCFSSTSPA 180
           AAK+IRG+KAKLNF             P   P    QPPAKK CV  +  S+    + P 
Sbjct: 121 AAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKVCVVSQSESELSQPSFPV 180

Query: 181 PASTRVNNSCEIDGLYYG--------EELASLRSFLDLDFEEEQQPSQVGGSDEFGQAVE 218
                  N  E   L YG        ++++SL SFL+LD    +QPSQ+   DE    V+
Sbjct: 181 EC-IGFGNGDEFQNLSYGFEPDYDLKQQISSLESFLELDGNTAEQPSQL---DESVSEVD 240

[Close]

BLAST of Carg18858 vs. ExPASy Swiss-Prot
Match: O22259 (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 GN=ERF071 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.2e-27
Identity = 67/125 (53.60%), Postives = 81/125 (64.80%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVPEPE 60
           MCGGA+IS  I             W  ++     LG       + +S+K+ +  +V E  
Sbjct: 1   MCGGAIISDFI-------------WSKSESEPSQLG-------SVSSRKKRKPVSVSEER 60

Query: 61  KTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEK 120
             ++ RKN+YRGIRQRPWGKWAAEIRDP KGVRVWLGTF TA+EAARAYD AA +IRG K
Sbjct: 61  DGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRK 105

Query: 121 AKLNF 126
           AKLNF
Sbjct: 121 AKLNF 105

[Close]

BLAST of Carg18858 vs. ExPASy Swiss-Prot
Match: Q9LUM4 (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 GN=RAP2-2 PE=1 SV=2)

HSP 1 Score: 119.4 bits (298), Expect = 5.3e-26
Identity = 89/255 (34.90%), Postives = 115/255 (45.10%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWPD---------------TDHF--SDLLGLDYCALK 60
           MCGGA+IS  I   R  +++N  +WPD               +D F   D    D+   K
Sbjct: 1   MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFK 60

Query: 61  TETS-----------------------------------------QKECRATAVPEPEKT 120
            +++                                          K+   +A    + +
Sbjct: 61  DDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSS 120

Query: 121 RKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAK 180
           ++ RKN YRGIRQRPWGKWAAEIRDP+KG R WLGTF+TAEEAARAYD AA+RIRG KAK
Sbjct: 121 KRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAK 180

Query: 181 LNFAPRPQPLPVSQ--PPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYYGEEL 196
           +NF     P  VSQ  P AK   +         S   P  + T V     +   Y     
Sbjct: 181 VNFPEEKNPSVVSQKRPSAKTNNLQK-------SVAKPNKSVTLVQQPTHLSQQYCNNSF 240

[Close]

BLAST of Carg18858 vs. ExPASy Swiss-Prot
Match: Q9SSA8 (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702 GN=RAP2-12 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.0e-26
Identity = 89/262 (33.97%), Postives = 120/262 (45.80%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWPD--------------TDHFSDL---LGLDYCALK 60
           MCGGA+IS  I   R R++++  +WPD                +F D       D+   K
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFK 60

Query: 61  TETS---------------QKECRATAVPEP-----------------------EKTRKA 120
            ++S                K    T+ P+P                       +   + 
Sbjct: 61  DDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRK 120

Query: 121 RKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNF 180
           RKN YRGIRQRPWGKWAAEIRDP++G R+WLGTF TAEEAARAYD AA+RIRG KAK+NF
Sbjct: 121 RKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNF 180

Query: 181 APRPQPLPVSQPPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYYGEELASLRS 208
                P    +  ++KR V   L     +  +P P+   V N              S  S
Sbjct: 181 -----PEENMKANSQKRSVKANLQKP-VAKPNPNPSPALVQN--------------SNIS 240

[Close]

BLAST of Carg18858 vs. ExPASy Swiss-Prot
Match: Q8H0T5 (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana OX=3702 GN=ERF073 PE=1 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 4.5e-25
Identity = 68/135 (50.37%), Postives = 82/135 (60.74%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWP----------DTDHFSDLLGLDYCALKTETSQKE 60
           MCGGA+IS  I  ++  + S  S W           D D   D L  D   + + T +  
Sbjct: 1   MCGGAVISDYIAPEKIARSSGKSSWRSNGVFDCSIYDFDGNFDELESDEPFVFSSTHKHH 60

Query: 61  CRATAVPEPEKTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYD 120
              +A       +K + + Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNTAEEAARAYD
Sbjct: 61  ASGSA----SDGKKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYD 120

Query: 121 EAAKRIRGEKAKLNF 126
             AKRIRG KAKLNF
Sbjct: 121 LEAKRIRGAKAKLNF 131

[Close]

BLAST of Carg18858 vs. ExPASy TrEMBL
Match: A0A6J1ER95 (ethylene-responsive transcription factor RAP2-3 OS=Cucurbita moschata OX=3662 GN=LOC111436844 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 2.5e-127
Identity = 226/229 (98.69%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVPEPE 60
           MCGG+LISGIIEKKRGRKL NGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVPEPE
Sbjct: 1   MCGGSLISGIIEKKRGRKLRNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVPEPE 60

Query: 61  KTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEK 120
           KTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEK
Sbjct: 61  KTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEK 120

Query: 121 AKLNFAPRPQPLPVSQPPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYYGEEL 180
           AKLNFAPRPQPLPVSQPPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYYGEEL
Sbjct: 121 AKLNFAPRPQPLPVSQPPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYYGEEL 180

Query: 181 ASLRSFLDLDFEEEQQPSQVGGSDEFGQAVELWMMDDPSLNEEKFGEVV 230
           ASLRSFLDLDFEEEQ+PSQVGGSDEFGQAVELWMMDDPSLNEEKFGEVV
Sbjct: 181 ASLRSFLDLDFEEEQEPSQVGGSDEFGQAVELWMMDDPSLNEEKFGEVV 229

[Close]

BLAST of Carg18858 vs. ExPASy TrEMBL
Match: A0A6J1KF31 (ethylene-responsive transcription factor RAP2-3 OS=Cucurbita maxima OX=3661 GN=LOC111494435 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 4.9e-123
Identity = 223/233 (95.71%), Postives = 224/233 (96.14%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETSQKECRAT----AV 60
           MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTET QK+CRAT    AV
Sbjct: 1   MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETPQKKCRATAETAAV 60

Query: 61  PEPEKTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRI 120
           PEPEKTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRI
Sbjct: 61  PEPEKTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRI 120

Query: 121 RGEKAKLNFAPRPQPLPVSQPPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYY 180
           RGEKAKLNFAPRPQPLPVSQPPAKKRCVAHELT DCFSSTS APASTRVNNSCEIDGLYY
Sbjct: 121 RGEKAKLNFAPRPQPLPVSQPPAKKRCVAHELTPDCFSSTSSAPASTRVNNSCEIDGLYY 180

Query: 181 GEELASLRSFLDLDFEEEQQPSQVGGSDEFGQAVELWMMDDPSLNEEKFGEVV 230
           GEELASLRSFLDLDFEEEQQPSQVGGSDEFGQAVELWMMDDPSLNEEKF  VV
Sbjct: 181 GEELASLRSFLDLDFEEEQQPSQVGGSDEFGQAVELWMMDDPSLNEEKFSSVV 233

[Close]

BLAST of Carg18858 vs. ExPASy TrEMBL
Match: A0A1S3C7W9 (ethylene-responsive transcription factor RAP2-3-like OS=Cucumis melo OX=3656 GN=LOC103497827 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 4.9e-75
Identity = 158/236 (66.95%), Postives = 184/236 (77.97%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVP--- 60
           MCGGA+IS  IEK+R  KL+N SLW   D FSDLLGL+Y ++KTE  +K  R+TA     
Sbjct: 20  MCGGAIISDFIEKRRTCKLNNESLWSHIDPFSDLLGLNYSSVKTEKPKKRDRSTAAEAVA 79

Query: 61  -EPEKTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRI 120
              EKTRK RKN+YRGIRQRPWGKWAAEIRDP+KGVRVWLGTFNTAEEAARAYDEAAKRI
Sbjct: 80  VAVEKTRKVRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRI 139

Query: 121 RGEKAKLNFAPRPQPLPVSQP--PAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGL 180
           RG KAKLNFAP P P P +QP  P KK+CV  ELT   F++T  +P  TR ++SC+ + L
Sbjct: 140 RGVKAKLNFAPAP-PSPTAQPQTPVKKQCVLPELTPGGFNTTD-SPPCTRADSSCDSEEL 199

Query: 181 YYGEELASLRSFLDLDFEEEQQPSQVGGSDEFGQA-VELWMMDDPSLNEEKFGEVV 230
           YYGEELASLRSFL LD  EEQQPSQ+GG+ EF +  ++LWMMDD SLNEEKF ++V
Sbjct: 200 YYGEELASLRSFLGLD-GEEQQPSQLGGNGEFERVDLDLWMMDDMSLNEEKFSQLV 252

[Close]

BLAST of Carg18858 vs. ExPASy TrEMBL
Match: A0A0A0KD18 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G318160 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.2e-73
Identity = 154/233 (66.09%), Postives = 180/233 (77.25%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVP--E 60
           MCGGA+IS  IEKKR  KL+N SLW   D FSDLLGL+Y ++KTET +K  R+TA     
Sbjct: 1   MCGGAIISDFIEKKRTCKLNNESLWSHIDPFSDLLGLNYSSVKTETPKKRNRSTAAEAVA 60

Query: 61  PEKTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRG 120
            EKTRKARKNIYRGIRQRPWGKWAAEIRDP+KGVRVWLGTFNTAEEAARAYDEAAKRIRG
Sbjct: 61  VEKTRKARKNIYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRIRG 120

Query: 121 EKAKLNFAPRPQPLPVS-QPPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYYG 180
           EKAKLNFAP P  L    Q P K +CV  E T    ++T  +P  TR ++SC+ + LYYG
Sbjct: 121 EKAKLNFAPAPPSLAAQRQTPVKMQCVVPEFTPSGLNTTG-SPPCTRADSSCDSEELYYG 180

Query: 181 EELASLRSFLDLDFEEEQQPSQVGGSDEFGQA-VELWMMDDPSLNEEKFGEVV 230
           EELASLRSFL LD  EEQQ S++GG+ EF +  +++WMMDD SLNE+KF ++V
Sbjct: 181 EELASLRSFLGLD-SEEQQASELGGNGEFERVDLDVWMMDDMSLNEQKFSQMV 231

[Close]

BLAST of Carg18858 vs. ExPASy TrEMBL
Match: A0A6J1CA63 (ethylene-responsive transcription factor RAP2-3-like OS=Momordica charantia OX=3673 GN=LOC111009718 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 7.4e-71
Identity = 155/243 (63.79%), Postives = 179/243 (73.66%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVPEPE 60
           MCGGA+IS  IEKKR RK SNG LW + D FSDLLGLD+ ++K+E  QK  R+ AV    
Sbjct: 1   MCGGAIISDFIEKKRSRKFSNGDLWSEIDPFSDLLGLDFSSVKSEKPQKRERSPAVAAEG 60

Query: 61  ---KTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIR 120
              K RK RKN+YRGIRQRPWGKWAAEIRDPQKGVRVWLGTF+TAEEAARAYDEAAKRIR
Sbjct: 61  IELKPRKTRKNLYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFSTAEEAARAYDEAAKRIR 120

Query: 121 GEKAKLNFAPRPQPLPVSQPPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYYG 180
           GEKAKLNFAP  QP    Q PAKKRCV  ELT +  ++T P P  +R +NS   DG+YYG
Sbjct: 121 GEKAKLNFAPAAQP----QAPAKKRCVLPELTREGLNTTGP-PTRSRTSNSYN-DGIYYG 180

Query: 181 EELAS----------LRSFLDLDFEEEQQPSQVGGSDEFGQ-AVELWMMDDPSLNEEKFG 230
           +ELAS          L SFL LD  E+QQ SQ+GGSDEF +  V+LWMMDD SLN ++ G
Sbjct: 181 DELASGFELKEQISNLTSFLGLD-GEDQQLSQLGGSDEFDRVVVDLWMMDDRSLNRQQLG 236

[Close]

BLAST of Carg18858 vs. TAIR 10
Match: AT3G16770.1 (ethylene-responsive element binding protein )

HSP 1 Score: 180.3 bits (456), Expect = 1.8e-45
Identity = 111/246 (45.12%), Postives = 142/246 (57.72%), Query Frame = 0


Query: 1   MCGGALISG---IIEKKRGRKLSNGSLWPDTDHFS--DLLGLDYCALKTETSQKECRATA 60
           MCGGA+IS    ++ K +GRKL+   LW + D  +  D  G    +    T+Q   +  A
Sbjct: 1   MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKLHPTNQVNVKEEA 60

Query: 61  VPEPEKT----RKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDE 120
           V + + T    R+ RKN+YRGIR+RPWGKWAAEIRDP+KGVRVWLGTFNTAEEAA AYD 
Sbjct: 61  VKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDV 120

Query: 121 AAKRIRGEKAKLNF------------APRPQPLPVSQPPAKKRCVAHELTSDCFSSTSPA 180
           AAK+IRG+KAKLNF             P   P    QPPAKK CV  +  S+    + P 
Sbjct: 121 AAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKVCVVSQSESELSQPSFPV 180

Query: 181 PASTRVNNSCEIDGLYYG--------EELASLRSFLDLDFEEEQQPSQVGGSDEFGQAVE 218
                  N  E   L YG        ++++SL SFL+LD    +QPSQ+   DE    V+
Sbjct: 181 EC-IGFGNGDEFQNLSYGFEPDYDLKQQISSLESFLELDGNTAEQPSQL---DESVSEVD 240

[Close]

BLAST of Carg18858 vs. TAIR 10
Match: AT2G47520.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 1.5e-28
Identity = 67/125 (53.60%), Postives = 81/125 (64.80%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWPDTDHFSDLLGLDYCALKTETSQKECRATAVPEPE 60
           MCGGA+IS  I             W  ++     LG       + +S+K+ +  +V E  
Sbjct: 1   MCGGAIISDFI-------------WSKSESEPSQLG-------SVSSRKKRKPVSVSEER 60

Query: 61  KTRKARKNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEK 120
             ++ RKN+YRGIRQRPWGKWAAEIRDP KGVRVWLGTF TA+EAARAYD AA +IRG K
Sbjct: 61  DGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRK 105

Query: 121 AKLNF 126
           AKLNF
Sbjct: 121 AKLNF 105

[Close]

BLAST of Carg18858 vs. TAIR 10
Match: AT3G14230.3 (related to AP2 2 )

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-27
Identity = 89/250 (35.60%), Postives = 115/250 (46.00%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWPD---------------TDHF--SDLLGLDYCALK 60
           MCGGA+IS  I   R  +++N  +WPD               +D F   D    D+   K
Sbjct: 1   MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFK 60

Query: 61  TETS------------------------------------QKECRATAVPEPEKTRKARK 120
            +++                                     K+   +A    + +++ RK
Sbjct: 61  DDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTGSAYAKKTVESAEQAEKSSKRKRK 120

Query: 121 NIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFAP 180
           N YRGIRQRPWGKWAAEIRDP+KG R WLGTF+TAEEAARAYD AA+RIRG KAK+NF  
Sbjct: 121 NQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPE 180

Query: 181 RPQPLPVSQ--PPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYYGEELASLRS 196
              P  VSQ  P AK   +         S   P  + T V     +   Y      +  S
Sbjct: 181 EKNPSVVSQKRPSAKTNNLQK-------SVAKPNKSVTLVQQPTHLSQQYCNNSFDN--S 240

[Close]

BLAST of Carg18858 vs. TAIR 10
Match: AT3G14230.2 (related to AP2 2 )

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-27
Identity = 89/251 (35.46%), Postives = 115/251 (45.82%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWPD---------------TDHF--SDLLGLDYCALK 60
           MCGGA+IS  I   R  +++N  +WPD               +D F   D    D+   K
Sbjct: 1   MCGGAIISDFIPPPRSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFK 60

Query: 61  TETS-------------------------------------QKECRATAVPEPEKTRKAR 120
            +++                                      K+   +A    + +++ R
Sbjct: 61  DDSAFDCEDDDDVFVNVKPFVFTATTKPVASAFVSTVGSAYAKKTVESAEQAEKSSKRKR 120

Query: 121 KNIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFA 180
           KN YRGIRQRPWGKWAAEIRDP+KG R WLGTF+TAEEAARAYD AA+RIRG KAK+NF 
Sbjct: 121 KNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFP 180

Query: 181 PRPQPLPVSQ--PPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYYGEELASLR 196
               P  VSQ  P AK   +         S   P  + T V     +   Y      +  
Sbjct: 181 EEKNPSVVSQKRPSAKTNNLQK-------SVAKPNKSVTLVQQPTHLSQQYCNNSFDN-- 240

[Close]

BLAST of Carg18858 vs. TAIR 10
Match: AT1G53910.3 (related to AP2 12 )

HSP 1 Score: 119.8 bits (299), Expect = 2.9e-27
Identity = 89/260 (34.23%), Postives = 120/260 (46.15%), Query Frame = 0


Query: 1   MCGGALISGIIEKKRGRKLSNGSLWPD--------------TDHFSDL---LGLDYCALK 60
           MCGGA+IS  I   R R++++  +WPD                +F D       D+   K
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFK 60

Query: 61  TETS---------------QKECRATAVPEP---------------------EKTRKARK 120
            ++S                K    T+ P+P                     +   + RK
Sbjct: 61  DDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAEVFGKKVTGLDGDAEKSANRKRK 120

Query: 121 NIYRGIRQRPWGKWAAEIRDPQKGVRVWLGTFNTAEEAARAYDEAAKRIRGEKAKLNFAP 180
           N YRGIRQRPWGKWAAEIRDP++G R+WLGTF TAEEAARAYD AA+RIRG KAK+NF  
Sbjct: 121 NQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNF-- 180

Query: 181 RPQPLPVSQPPAKKRCVAHELTSDCFSSTSPAPASTRVNNSCEIDGLYYGEELASLRSFL 208
              P    +  ++KR V   L     +  +P P+   V N              S  SF 
Sbjct: 181 ---PEENMKANSQKRSVKANLQKP-VAKPNPNPSPALVQN--------------SNISFE 240

The following BLAST results are available for this feature:

BLAST of Carg18858 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593985.1	2.7e-128	100.00	Ethylene-responsive transcription factor RAP2-3, partial [Cucurbita argyrosperma...	[more]
XP_022930379.1	5.2e-127	98.69	ethylene-responsive transcription factor RAP2-3 [Cucurbita moschata]	[more]
XP_023514639.1	5.7e-126	97.85	ethylene-responsive transcription factor RAP2-3 [Cucurbita pepo subsp. pepo]	[more]
XP_023000151.1	1.0e-122	95.71	ethylene-responsive transcription factor RAP2-3 [Cucurbita maxima]	[more]
XP_008458405.1	1.0e-74	66.95	PREDICTED: ethylene-responsive transcription factor RAP2-3-like [Cucumis melo]	[more]

BLAST of Carg18858 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42736	2.5e-44	45.12	Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana OX=3702 ...	[more]
O22259	2.2e-27	53.60	Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LUM4	5.3e-26	34.90	Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SSA8	7.0e-26	33.97	Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702...	[more]
Q8H0T5	4.5e-25	50.37	Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Carg18858 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ER95	2.5e-127	98.69	ethylene-responsive transcription factor RAP2-3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KF31	4.9e-123	95.71	ethylene-responsive transcription factor RAP2-3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3C7W9	4.9e-75	66.95	ethylene-responsive transcription factor RAP2-3-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0KD18	1.2e-73	66.09	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G318160 PE=...	[more]
A0A6J1CA63	7.4e-71	63.79	ethylene-responsive transcription factor RAP2-3-like OS=Momordica charantia OX=3...	[more]

BLAST of Carg18858 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16770.1	1.8e-45	45.12	ethylene-responsive element binding protein	[more]
AT2G47520.1	1.5e-28	53.60	Integrase-type DNA-binding superfamily protein	[more]
AT3G14230.3	1.0e-27	35.60	related to AP2 2	[more]
AT3G14230.2	1.3e-27	35.46	related to AP2 2	[more]
AT1G53910.3	2.9e-27	34.23	related to AP2 12	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 102..122
None	No IPR available	PANTHER	PTHR31190:SF210	EREBP TRANSCRIPTION FACTOR	coord: 45..143
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 92..108 score: 73.69 coord: 70..81 score: 70.45
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 69..132 e-value: 4.1E-39 score: 145.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 70..119 e-value: 1.7E-15 score: 56.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 69..126 score: 23.8412
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 69..126 e-value: 2.21911E-34 score: 115.447
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 69..127 e-value: 7.0E-27 score: 95.4
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 45..143
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 69..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18858-RA	Carg18858-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity