Carg18816 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18816
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	nuclear pore complex protein NUP50A-like
Location	Carg_Chr08: 3752786 .. 3754171 (-)
RNA-Seq Expression	Carg18816
Synteny	Carg18816

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGATGCTGAAAATGCAACATCTACAAAGAAGAGGGCTGCTGGAAGGGAACTATCACGCGATAACCCTGGGCTTGATGATGAAGATGATGTGTCTGAGCAAGCAACTGGAACATTTAAGCGGGCTAGTGATGAAGTGCTAGCCGGCAGAAGAATGGTCAAAGTACGTCGTGGTCAGACTGCCTCTACCCCATCTTCTAATCCCTTTGCAGGAATACGCTTGGTACCTCCAACCGATAATAGTGGAAGTGCTTCAGAAGGTAAAAGTACTGCGCAGGCAGTTGGTGAAAAAACAGGTTCAGATGAGGCAAATGGAAAGGATGTTTCCCATGAAGAGAAAAAGGATGGAGATCATAATGATGAGCCAGCAGAACATAAAATTGACACATCAGAGGCTGAATCTGGTACAAATGTGCAGAATGTTGATCAGAATAGCACTGTTGTAAGTGAATCTGCCATACCTAAGGTAGATGATAACTTAGTTGCTGAAAGTAATAAAATTGAAAATGAAGTGCAAGCAGGAGAAGATAAGACTAAAAATGAGGAACTTATAGGAGGTGATAATGCTGAGAATGATGCATGTGTTAGTGGCGGTAAGAATGAGAACGAGGATCCTGCACGAGGCAATGAGAATGAAAATGAGAAACCCTGTGAAGGAAATGAAATACCAAACAAAGAAACTGGGGATCAAGAAAAGGTAGAACATGAAGAAAAGAAAGAAGAGGGAAGTGAAGCCGATACTAGTAAGGAGGCTTCTCCGTTGAGCTCATTCCAACAACTGTCAAGTAGCCAGAACGCCTTCACAGGTCTTGCAGGTACCGGATTTTCGACTACCACGTTCTCCTTCGGTAATGTACTCAAGGATGGGGCTGGTCTAAGTTCTAGTTTTGGTCTCTCTAATAATGGTAGCTCAGCCTTGTTTAATACTTCTTCCACTGTTTCCAAGAGTGAGAAAAGCGGTTTTCCATCAATGCAAGAGGTTGCAGTTGAAACTGGTGAAGAAAATGAACGTGTGGTTTTCAATGCTGATTCTATATTATTCGAGTTTCTCGACGGATCGTGGAAGGAACGTGGAAAAGGAGAGCTGAAAGTTAATGTCCCAACAATCGGTACTGGGCGAGCAAGGATTCTGATGAGGGCTAGAGGAAATTACAGGTTAATTTTGAATGCAAGTCTTTACCCTGACATGAAGCTCACAAACATGGACAAGAAGGGTATCACGTTTGCCTGCATGAACAGCACTAGCGAAGGGAAGGATGGTCTTTCAACATTTGCTTTGAAGTTCAAGGACGCATCCATAGTGGAAGAGTTTCGTGCAGCAGTCACAGAGCATAAAGGCAAGTCTTCTTCTTCAGCTCTGAAAACGCCAGAGAATTCTCCTTAA

mRNA sequence

ATGGGGGATGCTGAAAATGCAACATCTACAAAGAAGAGGGCTGCTGGAAGGGAACTATCACGCGATAACCCTGGGCTTGATGATGAAGATGATGTGTCTGAGCAAGCAACTGGAACATTTAAGCGGGCTAGTGATGAAGTGCTAGCCGGCAGAAGAATGGTCAAAGTACGTCGTGGTCAGACTGCCTCTACCCCATCTTCTAATCCCTTTGCAGGAATACGCTTGGTACCTCCAACCGATAATAGTGGAAGTGCTTCAGAAGGTAAAAGTACTGCGCAGGCAGTTGGTGAAAAAACAGGTTCAGATGAGGCAAATGGAAAGGATGTTTCCCATGAAGAGAAAAAGGATGGAGATCATAATGATGAGCCAGCAGAACATAAAATTGACACATCAGAGGCTGAATCTGGTACAAATGTGCAGAATGTTGATCAGAATAGCACTGTTGTAAGTGAATCTGCCATACCTAAGGTAGATGATAACTTAGTTGCTGAAAGTAATAAAATTGAAAATGAAGTGCAAGCAGGAGAAGATAAGACTAAAAATGAGGAACTTATAGGAGGTGATAATGCTGAGAATGATGCATGTGTTAGTGGCGGTAAGAATGAGAACGAGGATCCTGCACGAGGCAATGAGAATGAAAATGAGAAACCCTGTGAAGGAAATGAAATACCAAACAAAGAAACTGGGGATCAAGAAAAGGTAGAACATGAAGAAAAGAAAGAAGAGGGAAGTGAAGCCGATACTAGTAAGGAGGCTTCTCCGTTGAGCTCATTCCAACAACTGTCAAGTAGCCAGAACGCCTTCACAGGTCTTGCAGGTACCGGATTTTCGACTACCACGTTCTCCTTCGGTAATGTACTCAAGGATGGGGCTGGTCTAAGTTCTAGTTTTGGTCTCTCTAATAATGGTAGCTCAGCCTTGTTTAATACTTCTTCCACTGTTTCCAAGAGTGAGAAAAGCGGTTTTCCATCAATGCAAGAGGTTGCAGTTGAAACTGGTGAAGAAAATGAACGTGTGGTTTTCAATGCTGATTCTATATTATTCGAGTTTCTCGACGGATCGTGGAAGGAACGTGGAAAAGGAGAGCTGAAAGTTAATGTCCCAACAATCGGTACTGGGCGAGCAAGGATTCTGATGAGGGCTAGAGGAAATTACAGGTTAATTTTGAATGCAAGTCTTTACCCTGACATGAAGCTCACAAACATGGACAAGAAGGGTATCACGTTTGCCTGCATGAACAGCACTAGCGAAGGGAAGGATGGTCTTTCAACATTTGCTTTGAAGTTCAAGGACGCATCCATAGTGGAAGAGTTTCGTGCAGCAGTCACAGAGCATAAAGGCAAGTCTTCTTCTTCAGCTCTGAAAACGCCAGAGAATTCTCCTTAA

Coding sequence (CDS)

ATGGGGGATGCTGAAAATGCAACATCTACAAAGAAGAGGGCTGCTGGAAGGGAACTATCACGCGATAACCCTGGGCTTGATGATGAAGATGATGTGTCTGAGCAAGCAACTGGAACATTTAAGCGGGCTAGTGATGAAGTGCTAGCCGGCAGAAGAATGGTCAAAGTACGTCGTGGTCAGACTGCCTCTACCCCATCTTCTAATCCCTTTGCAGGAATACGCTTGGTACCTCCAACCGATAATAGTGGAAGTGCTTCAGAAGGTAAAAGTACTGCGCAGGCAGTTGGTGAAAAAACAGGTTCAGATGAGGCAAATGGAAAGGATGTTTCCCATGAAGAGAAAAAGGATGGAGATCATAATGATGAGCCAGCAGAACATAAAATTGACACATCAGAGGCTGAATCTGGTACAAATGTGCAGAATGTTGATCAGAATAGCACTGTTGTAAGTGAATCTGCCATACCTAAGGTAGATGATAACTTAGTTGCTGAAAGTAATAAAATTGAAAATGAAGTGCAAGCAGGAGAAGATAAGACTAAAAATGAGGAACTTATAGGAGGTGATAATGCTGAGAATGATGCATGTGTTAGTGGCGGTAAGAATGAGAACGAGGATCCTGCACGAGGCAATGAGAATGAAAATGAGAAACCCTGTGAAGGAAATGAAATACCAAACAAAGAAACTGGGGATCAAGAAAAGGTAGAACATGAAGAAAAGAAAGAAGAGGGAAGTGAAGCCGATACTAGTAAGGAGGCTTCTCCGTTGAGCTCATTCCAACAACTGTCAAGTAGCCAGAACGCCTTCACAGGTCTTGCAGGTACCGGATTTTCGACTACCACGTTCTCCTTCGGTAATGTACTCAAGGATGGGGCTGGTCTAAGTTCTAGTTTTGGTCTCTCTAATAATGGTAGCTCAGCCTTGTTTAATACTTCTTCCACTGTTTCCAAGAGTGAGAAAAGCGGTTTTCCATCAATGCAAGAGGTTGCAGTTGAAACTGGTGAAGAAAATGAACGTGTGGTTTTCAATGCTGATTCTATATTATTCGAGTTTCTCGACGGATCGTGGAAGGAACGTGGAAAAGGAGAGCTGAAAGTTAATGTCCCAACAATCGGTACTGGGCGAGCAAGGATTCTGATGAGGGCTAGAGGAAATTACAGGTTAATTTTGAATGCAAGTCTTTACCCTGACATGAAGCTCACAAACATGGACAAGAAGGGTATCACGTTTGCCTGCATGAACAGCACTAGCGAAGGGAAGGATGGTCTTTCAACATTTGCTTTGAAGTTCAAGGACGCATCCATAGTGGAAGAGTTTCGTGCAGCAGTCACAGAGCATAAAGGCAAGTCTTCTTCTTCAGCTCTGAAAACGCCAGAGAATTCTCCTTAA

Protein sequence

MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRMVKVRRGQTASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDGDHNDEPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAESNKIENEVQAGEDKTKNEELIGGDNAENDACVSGGKNENEDPARGNENENEKPCEGNEIPNKETGDQEKVEHEEKKEEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGAGLSSSFGLSNNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGKGELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKSSSSALKTPENSP

Homology

[Close]

BLAST of Carg18816 vs. NCBI nr
Match: KAG7025782.1 (Nuclear pore complex protein NUP50A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 849.4 bits (2193), Expect = 1.5e-242
Identity = 461/461 (100.00%), Postives = 461/461 (100.00%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRMVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRMVKVRRGQ
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRMVKVRRGQ 60

Query: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDGDHN 120
           TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDGDHN
Sbjct: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDGDHN 120

Query: 121 DEPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAESNKIENEVQAGEDKTK 180
           DEPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAESNKIENEVQAGEDKTK
Sbjct: 121 DEPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAESNKIENEVQAGEDKTK 180

Query: 181 NEELIGGDNAENDACVSGGKNENEDPARGNENENEKPCEGNEIPNKETGDQEKVEHEEKK 240
           NEELIGGDNAENDACVSGGKNENEDPARGNENENEKPCEGNEIPNKETGDQEKVEHEEKK
Sbjct: 181 NEELIGGDNAENDACVSGGKNENEDPARGNENENEKPCEGNEIPNKETGDQEKVEHEEKK 240

Query: 241 EEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGAGLSSSFGLS 300
           EEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGAGLSSSFGLS
Sbjct: 241 EEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGAGLSSSFGLS 300

Query: 301 NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK 360
           NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK
Sbjct: 301 NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK 360

Query: 361 GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKD 420
           GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKD
Sbjct: 361 GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKD 420

Query: 421 GLSTFALKFKDASIVEEFRAAVTEHKGKSSSSALKTPENSP 462
           GLSTFALKFKDASIVEEFRAAVTEHKGKSSSSALKTPENSP
Sbjct: 421 GLSTFALKFKDASIVEEFRAAVTEHKGKSSSSALKTPENSP 461

[Close]

BLAST of Carg18816 vs. NCBI nr
Match: KAG6593442.1 (Nuclear pore complex protein NUP50A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 842.4 bits (2175), Expect = 1.8e-240
Identity = 458/461 (99.35%), Postives = 458/461 (99.35%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRMVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRMVKVRRGQ
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRMVKVRRGQ 60

Query: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDGDHN 120
           TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSH EKKDGDHN
Sbjct: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHVEKKDGDHN 120

Query: 121 DEPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAESNKIENEVQAGEDKTK 180
           D PAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAESNKIENEVQAGEDKTK
Sbjct: 121 DGPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAESNKIENEVQAGEDKTK 180

Query: 181 NEELIGGDNAENDACVSGGKNENEDPARGNENENEKPCEGNEIPNKETGDQEKVEHEEKK 240
           NEELIGGDNAENDACVSGGKNENEDPARGNENENEKPCEGNEIPNKETGDQEKVEHEEKK
Sbjct: 181 NEELIGGDNAENDACVSGGKNENEDPARGNENENEKPCEGNEIPNKETGDQEKVEHEEKK 240

Query: 241 EEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGAGLSSSFGLS 300
           EEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGAGLSSSFGLS
Sbjct: 241 EEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGAGLSSSFGLS 300

Query: 301 NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK 360
           NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK
Sbjct: 301 NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK 360

Query: 361 GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKD 420
           GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKD
Sbjct: 361 GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKD 420

Query: 421 GLSTFALKFKDASIVEEFRAAVTEHKGKSSSSALKTPENSP 462
           GLSTFALKFKDASIVEEFRAAVTEHKGKSSSS LKTPENSP
Sbjct: 421 GLSTFALKFKDASIVEEFRAAVTEHKGKSSSSVLKTPENSP 461

[Close]

BLAST of Carg18816 vs. NCBI nr
Match: XP_022964514.1 (nuclear pore complex protein NUP50A-like [Cucurbita moschata])

HSP 1 Score: 838.6 bits (2165), Expect = 2.6e-239
Identity = 454/461 (98.48%), Postives = 459/461 (99.57%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRMVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRR+VKVRRGQ
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRIVKVRRGQ 60

Query: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDGDHN 120
           TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDGDHN
Sbjct: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDGDHN 120

Query: 121 DEPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAESNKIENEVQAGEDKTK 180
           DEPAEHKIDTSEAESGTNVQNVDQNST VSESAIPKVDDNLVAESNKIENEVQAGEDKTK
Sbjct: 121 DEPAEHKIDTSEAESGTNVQNVDQNSTDVSESAIPKVDDNLVAESNKIENEVQAGEDKTK 180

Query: 181 NEELIGGDNAENDACVSGGKNENEDPARGNENENEKPCEGNEIPNKETGDQEKVEHEEKK 240
           NEELIGGDNAENDACVSGGKNENEDPARGNENENE+PCEGNE+PNKETGDQEKVEHEEKK
Sbjct: 181 NEELIGGDNAENDACVSGGKNENEDPARGNENENEEPCEGNEMPNKETGDQEKVEHEEKK 240

Query: 241 EEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGAGLSSSFGLS 300
           EEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGAGLSSSFGLS
Sbjct: 241 EEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGAGLSSSFGLS 300

Query: 301 NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK 360
           NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK
Sbjct: 301 NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK 360

Query: 361 GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKD 420
           GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKD
Sbjct: 361 GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKD 420

Query: 421 GLSTFALKFKDASIVEEFRAAVTEHKGKSSSSALKTPENSP 462
           GLSTFALKFKDASIVEEFRAAVTEHKGK+SS+ LKTPENSP
Sbjct: 421 GLSTFALKFKDASIVEEFRAAVTEHKGKASSTVLKTPENSP 461

[Close]

BLAST of Carg18816 vs. NCBI nr
Match: XP_023514352.1 (nuclear pore complex protein NUP50A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 827.8 bits (2137), Expect = 4.7e-236
Identity = 448/461 (97.18%), Postives = 457/461 (99.13%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRMVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRR+VKVRRGQ
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRIVKVRRGQ 60

Query: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDGDHN 120
           TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVG+KTGSDEANGKDVSHEEKKDGDHN
Sbjct: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGDKTGSDEANGKDVSHEEKKDGDHN 120

Query: 121 DEPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAESNKIENEVQAGEDKTK 180
           DEPAEHKIDTSEAESGTNVQNVDQNST+VSESAIPKVDD  VAESNKIENEVQAGEDKTK
Sbjct: 121 DEPAEHKIDTSEAESGTNVQNVDQNSTIVSESAIPKVDDYSVAESNKIENEVQAGEDKTK 180

Query: 181 NEELIGGDNAENDACVSGGKNENEDPARGNENENEKPCEGNEIPNKETGDQEKVEHEEKK 240
           NEELIGGDNAENDACVSGGKNENEDPARGNENENE+PCEGNEI NKETGDQEKVE+EEKK
Sbjct: 181 NEELIGGDNAENDACVSGGKNENEDPARGNENENEEPCEGNEIQNKETGDQEKVENEEKK 240

Query: 241 EEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGAGLSSSFGLS 300
           E+GSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGN+LKDGAGLSSSFGLS
Sbjct: 241 EKGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNILKDGAGLSSSFGLS 300

Query: 301 NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK 360
           NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK
Sbjct: 301 NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK 360

Query: 361 GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKD 420
           GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKD
Sbjct: 361 GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKD 420

Query: 421 GLSTFALKFKDASIVEEFRAAVTEHKGKSSSSALKTPENSP 462
           GLSTFALKFKDASIVEEFRAAVTEHKGK+SS+ LKTPENSP
Sbjct: 421 GLSTFALKFKDASIVEEFRAAVTEHKGKASSTVLKTPENSP 461

[Close]

BLAST of Carg18816 vs. NCBI nr
Match: XP_023000356.1 (nuclear pore complex protein NUP50A-like [Cucurbita maxima])

HSP 1 Score: 824.7 bits (2129), Expect = 3.9e-235
Identity = 447/461 (96.96%), Postives = 456/461 (98.92%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRMVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRR+VKVRRGQ
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRIVKVRRGQ 60

Query: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDGDHN 120
           TASTPSSNPFAGIRLVPPTDNSGSASEGKS AQAVGEKTGSDEANGKDVSHEEKKDGDHN
Sbjct: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSNAQAVGEKTGSDEANGKDVSHEEKKDGDHN 120

Query: 121 DEPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAESNKIENEVQAGEDKTK 180
           DEPAEHKIDTSEAESGTNVQNVDQNST+VSESAIPKVDDNLVAESNKIENEVQAGEDKTK
Sbjct: 121 DEPAEHKIDTSEAESGTNVQNVDQNSTIVSESAIPKVDDNLVAESNKIENEVQAGEDKTK 180

Query: 181 NEELIGGDNAENDACVSGGKNENEDPARGNENENEKPCEGNEIPNKETGDQEKVEHEEKK 240
           NEELIGG+NAENDACVSGGKNENEDPA+GNENENE+PCEGNEI NKETGDQEKVE+EEKK
Sbjct: 181 NEELIGGENAENDACVSGGKNENEDPAQGNENENEEPCEGNEIQNKETGDQEKVENEEKK 240

Query: 241 EEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGAGLSSSFGLS 300
           E GSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGN+LKDGAGLSSSFGLS
Sbjct: 241 EVGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNILKDGAGLSSSFGLS 300

Query: 301 NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK 360
           NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK
Sbjct: 301 NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK 360

Query: 361 GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKD 420
           GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSE KD
Sbjct: 361 GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEVKD 420

Query: 421 GLSTFALKFKDASIVEEFRAAVTEHKGKSSSSALKTPENSP 462
           GLSTFALKFKDASIVEEFRAAVTEHKGK+SS+ LKTPENSP
Sbjct: 421 GLSTFALKFKDASIVEEFRAAVTEHKGKASSTVLKTPENSP 461

[Close]

BLAST of Carg18816 vs. ExPASy Swiss-Prot
Match: Q9C829 (Nuclear pore complex protein NUP50A OS=Arabidopsis thaliana OX=3702 GN=NUP50A PE=1 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 3.0e-84
Identity = 226/483 (46.79%), Postives = 295/483 (61.08%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRMVKVRRG 60
           MGD+EN    +KKR A ++LSRDNPGLDD+DD +E  +GTFK+ASDEVLA RR+V+V+R 
Sbjct: 1   MGDSENVQQPSKKRGALKQLSRDNPGLDDDDDSAELESGTFKKASDEVLASRRIVRVKRK 60

Query: 61  QTASTP--SSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDG 120
           + ++ P  +SNPFAGI+LVP T  + +++   + A     K    EA  +D  +++  D 
Sbjct: 61  EPSAAPVAASNPFAGIQLVPTT--APASTPVGTNAPLAESKLAPAEAVVED--NQKASDI 120

Query: 121 DHNDEPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAE----SNKIENEVQ 180
           +  DE    K+D  +A      +  D++     +SA  +V    VA+       + N   
Sbjct: 121 EEGDEVDSKKVDVKDAVGEETEKTKDKDDNHCGKSADVQVAATEVAQMVSCDTNVCNNAV 180

Query: 181 AGEDKT--KNEELIGGDNAENDACVSGGKNENEDPARGNENENEKPCEGNEIPNKETGDQ 240
            G D+T    E+  GGD AE                       +K  EGN I        
Sbjct: 181 EGTDQTDFPLEKDSGGDQAE-----------------------KKEKEGNGI-------- 240

Query: 241 EKVEHEEKKEEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGA 300
                        EAD + +    SSFQQ SS++NAFTGLA T  S ++FSFG V +DG+
Sbjct: 241 ------------EEADKNGDNGAFSSFQQHSSNKNAFTGLASTEASGSSFSFGLVSQDGS 300

Query: 301 ---GLSSSFGLSNNGSSALFNT--SSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSI 360
              G    FGL ++ SS++F    SS + KSE SGFP  QEV+ ETGEENE+V F+ADSI
Sbjct: 301 TGTGSLFGFGLPSSNSSSIFGATGSSIIKKSEGSGFPPKQEVSTETGEENEKVAFSADSI 360

Query: 361 LFEFLDGSWKERGKGELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKG 420
           +FE+LDG WKERGKGELKVNV +   G+AR++MRA+GNYRLILNASLYP+MKL NMDKKG
Sbjct: 361 MFEYLDGGWKERGKGELKVNVSS-NDGKARLVMRAKGNYRLILNASLYPEMKLANMDKKG 420

Query: 421 ITFACMNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHK--------GKSSSSALKTPE 462
           ITFAC+NS SEGK+GLSTFALKFKD +IVEEFR A+ +HK         + S+  LKTPE
Sbjct: 421 ITFACVNSVSEGKEGLSTFALKFKDPTIVEEFRVAIDKHKDSKPMEKAAEKSALPLKTPE 435

[Close]

BLAST of Carg18816 vs. ExPASy Swiss-Prot
Match: Q9LW88 (Nuclear pore complex protein NUP50B OS=Arabidopsis thaliana OX=3702 GN=NUP50B PE=1 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 4.0e-81
Identity = 226/483 (46.79%), Postives = 297/483 (61.49%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGLDDED-DVSEQATGTFKRASDEVLAGRRMVKVRR 60
           MGD++NA   ++KR A +ELSRDNPGLDD+D D S   +GTF  AS EVLA RR+++VRR
Sbjct: 1   MGDSDNAIPFSRKRTALKELSRDNPGLDDDDEDTSALESGTFNTASKEVLASRRIIRVRR 60

Query: 61  GQTAST--PSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKD 120
              ++T  P+SNPF GIRLVP T  + S +  ++T      K  +      D + E   D
Sbjct: 61  TDRSATAPPASNPFTGIRLVPFTAPAPSTAAAETTKPLSAGKQETLADGRSDATKE--TD 120

Query: 121 GDHNDEPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAESNKIENEVQAGE 180
           GD     ++ K D  +A      Q  D+ S    +     + D    E ++  N V+ G 
Sbjct: 121 GD-----SKEKSDAIDAVGKQETQG-DEISAKTKD-----IIDGGEKEMSEAVNSVEGGG 180

Query: 181 DKTKNEELIGGDNAENDACVSGGKNENEDPARGNENENEKPCEGNEIPNKETGDQEKVEH 240
              KNE+ I          V+ G+   +D     +N N    EG++   K+TG  +  E 
Sbjct: 181 AVNKNEDEIKTTMVTE---VAAGEETVKD-----DNNNSNTVEGSDCVVKDTGGNQ-TEK 240

Query: 241 EEKKEEGSEADTSK--EASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGA--- 300
           E K+ +G+E DT K  ++  LSSF Q SSS+NAFTGLA TGFS ++FSFG V ++G+   
Sbjct: 241 EGKEGDGNE-DTEKNGDSGALSSFHQHSSSKNAFTGLASTGFSASSFSFGLVPQEGSTGS 300

Query: 301 ---GLSSSFGLSNNGSSALFNTSSTVSKSEKS-----GFPSMQEVAVETGEENERVVFNA 360
                S SFG +NNG+S+LF  S   S + KS      FPS Q+V+VETGEENE+  F A
Sbjct: 301 GSEQSSFSFGQANNGNSSLFGASVATSITTKSTETTTAFPSKQDVSVETGEENEKAAFTA 360

Query: 361 DSILFEFLDGSWKERGKGELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMD 420
           DS++FE+L+G WKERGKGELKVN+ T    +AR++MR++GNYRL LNASLYP+MKL  MD
Sbjct: 361 DSVMFEYLEGGWKERGKGELKVNISTTENRKARLVMRSKGNYRLTLNASLYPEMKLAKMD 420

Query: 421 KKGITFACMNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKSSSSA-----LKTPE 462
           KKGITFAC+NS S+ KDGLST ALKFKD ++VEEFRA + EHK    S A     LKTPE
Sbjct: 421 KKGITFACVNSVSDAKDGLSTLALKFKDPTVVEEFRAVIEEHKDSKPSVAEAAAPLKTPE 460

[Close]

BLAST of Carg18816 vs. ExPASy Swiss-Prot
Match: A0A0B4K7J2 (E3 SUMO-protein ligase RanBP2 OS=Drosophila melanogaster OX=7227 GN=Nup358 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.0e-11
Identity = 47/140 (33.57%), Postives = 76/140 (54.29%), Query Frame = 0


Query: 323  PSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGKGELKVNVPTIGTGRARILMRAR 382
            P   EV V TGEE E + F + + LF ++D  WKERG G +K+ +    TG +R+LMR  
Sbjct: 1315 PLPDEVEVRTGEEGEDIKFTSRAKLFRYVDKEWKERGTGVIKI-LCDKATGVSRVLMRRD 1374

Query: 383  GNYRLILNASLYPDMKLT----NMDKKGITFACMNSTSEGKDGLSTFALKFKDASIVEEF 442
              +++  N ++  D+ +     + DKK + +A  N  ++ +  L  F ++FK   + EEF
Sbjct: 1375 QTHKVCANHTITADITINVANQDKDKKSLLWAA-NDFADEQVTLERFLVRFKTGELAEEF 1434

Query: 443  RAAVTEHKGKSSSSALKTPE 459
            R A T+     +S A K+ E
Sbjct: 1435 RVAFTK-----ASEAAKSKE 1447

[Close]

BLAST of Carg18816 vs. ExPASy TrEMBL
Match: A0A6J1HNF6 (nuclear pore complex protein NUP50A-like OS=Cucurbita moschata OX=3662 GN=LOC111464517 PE=4 SV=1)

HSP 1 Score: 838.6 bits (2165), Expect = 1.3e-239
Identity = 454/461 (98.48%), Postives = 459/461 (99.57%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRMVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRR+VKVRRGQ
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRIVKVRRGQ 60

Query: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDGDHN 120
           TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDGDHN
Sbjct: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDGDHN 120

Query: 121 DEPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAESNKIENEVQAGEDKTK 180
           DEPAEHKIDTSEAESGTNVQNVDQNST VSESAIPKVDDNLVAESNKIENEVQAGEDKTK
Sbjct: 121 DEPAEHKIDTSEAESGTNVQNVDQNSTDVSESAIPKVDDNLVAESNKIENEVQAGEDKTK 180

Query: 181 NEELIGGDNAENDACVSGGKNENEDPARGNENENEKPCEGNEIPNKETGDQEKVEHEEKK 240
           NEELIGGDNAENDACVSGGKNENEDPARGNENENE+PCEGNE+PNKETGDQEKVEHEEKK
Sbjct: 181 NEELIGGDNAENDACVSGGKNENEDPARGNENENEEPCEGNEMPNKETGDQEKVEHEEKK 240

Query: 241 EEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGAGLSSSFGLS 300
           EEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGAGLSSSFGLS
Sbjct: 241 EEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGAGLSSSFGLS 300

Query: 301 NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK 360
           NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK
Sbjct: 301 NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK 360

Query: 361 GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKD 420
           GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKD
Sbjct: 361 GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKD 420

Query: 421 GLSTFALKFKDASIVEEFRAAVTEHKGKSSSSALKTPENSP 462
           GLSTFALKFKDASIVEEFRAAVTEHKGK+SS+ LKTPENSP
Sbjct: 421 GLSTFALKFKDASIVEEFRAAVTEHKGKASSTVLKTPENSP 461

[Close]

BLAST of Carg18816 vs. ExPASy TrEMBL
Match: A0A6J1KFN4 (nuclear pore complex protein NUP50A-like OS=Cucurbita maxima OX=3661 GN=LOC111494613 PE=4 SV=1)

HSP 1 Score: 824.7 bits (2129), Expect = 1.9e-235
Identity = 447/461 (96.96%), Postives = 456/461 (98.92%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRMVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRR+VKVRRGQ
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRIVKVRRGQ 60

Query: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDGDHN 120
           TASTPSSNPFAGIRLVPPTDNSGSASEGKS AQAVGEKTGSDEANGKDVSHEEKKDGDHN
Sbjct: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSNAQAVGEKTGSDEANGKDVSHEEKKDGDHN 120

Query: 121 DEPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAESNKIENEVQAGEDKTK 180
           DEPAEHKIDTSEAESGTNVQNVDQNST+VSESAIPKVDDNLVAESNKIENEVQAGEDKTK
Sbjct: 121 DEPAEHKIDTSEAESGTNVQNVDQNSTIVSESAIPKVDDNLVAESNKIENEVQAGEDKTK 180

Query: 181 NEELIGGDNAENDACVSGGKNENEDPARGNENENEKPCEGNEIPNKETGDQEKVEHEEKK 240
           NEELIGG+NAENDACVSGGKNENEDPA+GNENENE+PCEGNEI NKETGDQEKVE+EEKK
Sbjct: 181 NEELIGGENAENDACVSGGKNENEDPAQGNENENEEPCEGNEIQNKETGDQEKVENEEKK 240

Query: 241 EEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGAGLSSSFGLS 300
           E GSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGN+LKDGAGLSSSFGLS
Sbjct: 241 EVGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNILKDGAGLSSSFGLS 300

Query: 301 NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK 360
           NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK
Sbjct: 301 NNGSSALFNTSSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSWKERGK 360

Query: 361 GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKD 420
           GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSE KD
Sbjct: 361 GELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEVKD 420

Query: 421 GLSTFALKFKDASIVEEFRAAVTEHKGKSSSSALKTPENSP 462
           GLSTFALKFKDASIVEEFRAAVTEHKGK+SS+ LKTPENSP
Sbjct: 421 GLSTFALKFKDASIVEEFRAAVTEHKGKASSTVLKTPENSP 461

[Close]

BLAST of Carg18816 vs. ExPASy TrEMBL
Match: A0A6J1GQJ1 (nuclear pore complex protein NUP50B-like OS=Cucurbita moschata OX=3662 GN=LOC111456179 PE=4 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 3.5e-189
Identity = 378/474 (79.75%), Postives = 410/474 (86.50%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRMVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDE+DVSEQ  GTFKRAS+EVLA RR+VKVRRGQ
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQEAGTFKRASEEVLATRRIVKVRRGQ 60

Query: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDGDHN 120
           TAS PSSNPFAGIRLVPPT+NSGSASE KS AQA GEKTGSDEA  KDVSHE+ +   H+
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSASEVKSDAQAAGEKTGSDEAKQKDVSHEKIQKDGHS 120

Query: 121 DEPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAESNKIENEVQAGEDKTK 180
           DEPAE K+DTSEAES  NVQNVDQNSTV SESAI ++DD  V E NKIENE+ AGEDK  
Sbjct: 121 DEPAECKLDTSEAESVPNVQNVDQNSTVASESAISELDDKQVTERNKIENEIPAGEDKNG 180

Query: 181 NEELIGGDNAENDACVSGG-----------KNENEDPARGNENENEKPCEGNEIPNKETG 240
           NEEL+  + AEND CVSGG           KNENEDPAR  +NENE+P EGNEI NKETG
Sbjct: 181 NEELVRDEKAENDECVSGGKNDNGDPAKGEKNENEDPARDAKNENEEPSEGNEIQNKETG 240

Query: 241 DQEKVEHEEKKEEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKD 300
           DQEK E+EE KE GSE D SK+A PLSSFQQLSSSQNAFTGLAGTG +T+TFSFGN+ KD
Sbjct: 241 DQEKTENEENKENGSETDPSKKAGPLSSFQQLSSSQNAFTGLAGTGLTTSTFSFGNIPKD 300

Query: 301 GAGLSSSFGLSNNGSSALFNT--SSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSIL 360
           G GL++SFGLS NGSSALF T  SS VSKSEKSGFPSMQEVAVETGEENE+VVF+ADSI+
Sbjct: 301 GVGLTASFGLSTNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFSADSIM 360

Query: 361 FEFLDGSWKERGKGELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGI 420
           FEF+DGSWKERGKGELKVNVPT GTGRARILMRARGNYRLILNASLYPDMKLTNMDK+GI
Sbjct: 361 FEFIDGSWKERGKGELKVNVPTSGTGRARILMRARGNYRLILNASLYPDMKLTNMDKRGI 420

Query: 421 TFACMNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKSSSSALKTPENSP 462
           TFACMNS SEGKDGLST+ LKF+D SIVEEFRAA+TEHKGK +S+ LKTPENSP
Sbjct: 421 TFACMNSASEGKDGLSTYGLKFRDVSIVEEFRAAITEHKGK-ASTVLKTPENSP 473

[Close]

BLAST of Carg18816 vs. ExPASy TrEMBL
Match: A0A6J1JV59 (nuclear pore complex protein NUP50B-like OS=Cucurbita maxima OX=3661 GN=LOC111488624 PE=4 SV=1)

HSP 1 Score: 665.2 bits (1715), Expect = 1.9e-187
Identity = 378/477 (79.25%), Postives = 410/477 (85.95%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRMVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDE+DVSEQ  GTFKRAS+EVLA RR+VKVRRGQ
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQEAGTFKRASEEVLATRRIVKVRRGQ 60

Query: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDGDHN 120
           TAS PSSNPFAGIRLVPPT+N+GSASE KS AQA GEKTGS+EA  KDVSHE+ +   H+
Sbjct: 61  TASAPSSNPFAGIRLVPPTENNGSASEVKSDAQAAGEKTGSNEAKQKDVSHEKFQKDGHS 120

Query: 121 DEPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAESNKIENEVQAGEDKTK 180
           DEPAE K+DTSEAES  NVQNVDQNSTV SESAI ++DD  V E NKIENEV AGEDK  
Sbjct: 121 DEPAECKLDTSEAESVPNVQNVDQNSTVASESAISELDDKQVTERNKIENEVPAGEDKNG 180

Query: 181 NEELIGGDNAENDACVSGG-----------KNENEDPARGNENENEKPCEGNEIPNKETG 240
           NEEL+  + AEND CVSGG           KNENEDPAR  +NENE+P EGNEI NKETG
Sbjct: 181 NEELVRDEKAENDECVSGGKNDNGDPAKGEKNENEDPARDAKNENEEPIEGNEIQNKETG 240

Query: 241 DQEKVEHE---EKKEEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNV 300
           DQEK+E+E   E KE GSE D SK+A PLSSFQQLSSSQNAFTGLAGTG  T+TFSFGN+
Sbjct: 241 DQEKIENEENKENKENGSETDPSKKAGPLSSFQQLSSSQNAFTGLAGTGLPTSTFSFGNI 300

Query: 301 LKDGAGLSSSFGLSNNGSSALFNT--SSTVSKSEKSGFPSMQEVAVETGEENERVVFNAD 360
            KDG GL++SFGLS NGSSALF T  SS VSKSEKSGFPSMQEVAVETGEENE+VVFNAD
Sbjct: 301 PKDGVGLTASFGLSTNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNAD 360

Query: 361 SILFEFLDGSWKERGKGELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDK 420
           SI+FEF+DGSWKERGKGELKVNVPT GTGRARILMRARGNYRLILNASLYPDMKLTNMDK
Sbjct: 361 SIMFEFIDGSWKERGKGELKVNVPTSGTGRARILMRARGNYRLILNASLYPDMKLTNMDK 420

Query: 421 KGITFACMNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKSSSSALKTPENSP 462
           +GITFACMNS SEGKDGLST+ LKF+D SIVEEFRAA+TEHKGK +S+ LKTPENSP
Sbjct: 421 RGITFACMNSASEGKDGLSTYGLKFRDVSIVEEFRAAITEHKGK-ASTVLKTPENSP 476

[Close]

BLAST of Carg18816 vs. ExPASy TrEMBL
Match: A0A1S4E3Q0 (nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500566 PE=4 SV=1)

HSP 1 Score: 662.9 bits (1709), Expect = 9.6e-187
Identity = 372/466 (79.83%), Postives = 410/466 (87.98%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRMVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPG DD++DVSEQ TGTFKRAS+EVLA RR+VKVRRG 
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHE-EKKDGDH 120
           TAS PSSNPFAGIRLVPPT+NSGS +E +   +A  EK GSDEANGKD+ HE  +KDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 NDEPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAESNKIENEVQAGEDKT 180
           +DEP + KIDTSEA+S   VQ VDQNSTV+SESAI KVDDNLV ESNKIENE  AG DKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 KNEELI--GGDNAENDACVSGGKNENEDPARGNENENEKPCEGNEIPNKETGDQEKVEHE 240
            NEEL+      +END CVS  KNE+E PARG++NENE+P EGNEI NKETG+QEK E+E
Sbjct: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240

Query: 241 EKKEEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGAGLSSSF 300
           E KE+ SE + SKEA+PL+SFQQLSSSQNAFTGLAGTGFST+TFSFGN+ KDG GL++SF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFNT--SSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFLDGSW 360
           GLSNNGSSALF T  SSTVSKSE+SGFPSMQEVAVETGEENE+VVFNADSILFEF+DGSW
Sbjct: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNST 420
           KERGKGELKVNVPT GTGR RILMRARGNYRLILNASLYPDMKLTNMDK+GITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 SEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKSSSSALKTPENSP 462
            +GKDGLSTF +KFKD SIVEEFRAAVTEHKGK+SS+ LKTPENSP
Sbjct: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466

[Close]

BLAST of Carg18816 vs. TAIR 10
Match: AT1G52380.1 (NUP50 (Nucleoporin 50 kDa) protein )

HSP 1 Score: 313.9 bits (803), Expect = 2.1e-85
Identity = 226/483 (46.79%), Postives = 295/483 (61.08%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRMVKVRRG 60
           MGD+EN    +KKR A ++LSRDNPGLDD+DD +E  +GTFK+ASDEVLA RR+V+V+R 
Sbjct: 1   MGDSENVQQPSKKRGALKQLSRDNPGLDDDDDSAELESGTFKKASDEVLASRRIVRVKRK 60

Query: 61  QTASTP--SSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKDG 120
           + ++ P  +SNPFAGI+LVP T  + +++   + A     K    EA  +D  +++  D 
Sbjct: 61  EPSAAPVAASNPFAGIQLVPTT--APASTPVGTNAPLAESKLAPAEAVVED--NQKASDI 120

Query: 121 DHNDEPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAE----SNKIENEVQ 180
           +  DE    K+D  +A      +  D++     +SA  +V    VA+       + N   
Sbjct: 121 EEGDEVDSKKVDVKDAVGEETEKTKDKDDNHCGKSADVQVAATEVAQMVSCDTNVCNNAV 180

Query: 181 AGEDKT--KNEELIGGDNAENDACVSGGKNENEDPARGNENENEKPCEGNEIPNKETGDQ 240
            G D+T    E+  GGD AE                       +K  EGN I        
Sbjct: 181 EGTDQTDFPLEKDSGGDQAE-----------------------KKEKEGNGI-------- 240

Query: 241 EKVEHEEKKEEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGA 300
                        EAD + +    SSFQQ SS++NAFTGLA T  S ++FSFG V +DG+
Sbjct: 241 ------------EEADKNGDNGAFSSFQQHSSNKNAFTGLASTEASGSSFSFGLVSQDGS 300

Query: 301 ---GLSSSFGLSNNGSSALFNT--SSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSI 360
              G    FGL ++ SS++F    SS + KSE SGFP  QEV+ ETGEENE+V F+ADSI
Sbjct: 301 TGTGSLFGFGLPSSNSSSIFGATGSSIIKKSEGSGFPPKQEVSTETGEENEKVAFSADSI 360

Query: 361 LFEFLDGSWKERGKGELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKG 420
           +FE+LDG WKERGKGELKVNV +   G+AR++MRA+GNYRLILNASLYP+MKL NMDKKG
Sbjct: 361 MFEYLDGGWKERGKGELKVNVSS-NDGKARLVMRAKGNYRLILNASLYPEMKLANMDKKG 420

Query: 421 ITFACMNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHK--------GKSSSSALKTPE 462
           ITFAC+NS SEGK+GLSTFALKFKD +IVEEFR A+ +HK         + S+  LKTPE
Sbjct: 421 ITFACVNSVSEGKEGLSTFALKFKDPTIVEEFRVAIDKHKDSKPMEKAAEKSALPLKTPE 435

[Close]

BLAST of Carg18816 vs. TAIR 10
Match: AT3G15970.1 (NUP50 (Nucleoporin 50 kDa) protein )

HSP 1 Score: 303.5 bits (776), Expect = 2.9e-82
Identity = 226/483 (46.79%), Postives = 297/483 (61.49%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGLDDED-DVSEQATGTFKRASDEVLAGRRMVKVRR 60
           MGD++NA   ++KR A +ELSRDNPGLDD+D D S   +GTF  AS EVLA RR+++VRR
Sbjct: 1   MGDSDNAIPFSRKRTALKELSRDNPGLDDDDEDTSALESGTFNTASKEVLASRRIIRVRR 60

Query: 61  GQTAST--PSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSHEEKKD 120
              ++T  P+SNPF GIRLVP T  + S +  ++T      K  +      D + E   D
Sbjct: 61  TDRSATAPPASNPFTGIRLVPFTAPAPSTAAAETTKPLSAGKQETLADGRSDATKE--TD 120

Query: 121 GDHNDEPAEHKIDTSEAESGTNVQNVDQNSTVVSESAIPKVDDNLVAESNKIENEVQAGE 180
           GD     ++ K D  +A      Q  D+ S    +     + D    E ++  N V+ G 
Sbjct: 121 GD-----SKEKSDAIDAVGKQETQG-DEISAKTKD-----IIDGGEKEMSEAVNSVEGGG 180

Query: 181 DKTKNEELIGGDNAENDACVSGGKNENEDPARGNENENEKPCEGNEIPNKETGDQEKVEH 240
              KNE+ I          V+ G+   +D     +N N    EG++   K+TG  +  E 
Sbjct: 181 AVNKNEDEIKTTMVTE---VAAGEETVKD-----DNNNSNTVEGSDCVVKDTGGNQ-TEK 240

Query: 241 EEKKEEGSEADTSK--EASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLKDGA--- 300
           E K+ +G+E DT K  ++  LSSF Q SSS+NAFTGLA TGFS ++FSFG V ++G+   
Sbjct: 241 EGKEGDGNE-DTEKNGDSGALSSFHQHSSSKNAFTGLASTGFSASSFSFGLVPQEGSTGS 300

Query: 301 ---GLSSSFGLSNNGSSALFNTSSTVSKSEKS-----GFPSMQEVAVETGEENERVVFNA 360
                S SFG +NNG+S+LF  S   S + KS      FPS Q+V+VETGEENE+  F A
Sbjct: 301 GSEQSSFSFGQANNGNSSLFGASVATSITTKSTETTTAFPSKQDVSVETGEENEKAAFTA 360

Query: 361 DSILFEFLDGSWKERGKGELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMD 420
           DS++FE+L+G WKERGKGELKVN+ T    +AR++MR++GNYRL LNASLYP+MKL  MD
Sbjct: 361 DSVMFEYLEGGWKERGKGELKVNISTTENRKARLVMRSKGNYRLTLNASLYPEMKLAKMD 420

Query: 421 KKGITFACMNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKSSSSA-----LKTPE 462
           KKGITFAC+NS S+ KDGLST ALKFKD ++VEEFRA + EHK    S A     LKTPE
Sbjct: 421 KKGITFACVNSVSDAKDGLSTLALKFKDPTVVEEFRAVIEEHKDSKPSVAEAAAPLKTPE 460

[Close]

BLAST of Carg18816 vs. TAIR 10
Match: AT5G58590.1 (RAN binding protein 1 )

HSP 1 Score: 47.4 bits (111), Expect = 3.7e-05
Identity = 38/125 (30.40%), Postives = 60/125 (48.00%), Query Frame = 0


Query: 325 MQEVAVETGEENERVVFNADSILFEF--LDGSWKERGKGELKVNVPTIGTGRARILMRAR 384
           ++EVAV TGEE+E  V +  S ++ F      WKERG G +K+ +    TG+ R++MR  
Sbjct: 33  LEEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWKERGAGTVKL-LKHKETGKVRLVMRQS 92

Query: 385 GNYRLILNASLYPDMKL---TNMDKKGITFACMNSTSEGKDGLSTFALKFKDASIVEEFR 444
              ++  N  +   M +   +  +K  +  A   S  E KD L  F ++F      + F 
Sbjct: 93  KTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGELKDEL--FCIRFASIENCKTFM 152

[Close]

BLAST of Carg18816 vs. TAIR 10
Match: AT2G30060.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 46.2 bits (108), Expect = 8.2e-05
Identity = 44/136 (32.35%), Postives = 68/136 (50.00%), Query Frame = 0


Query: 325 MQEVAVETGEENERVVFNADSILFEF-LDGS-WKERGKGELKVNVPTIGTGRARILMRAR 384
           ++EVAV TGEE+E  + +  S L+ F  DGS WKERG G +K     + +G+ R++MR  
Sbjct: 36  LEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQWKERGAGTVKFLKHRV-SGKIRLVMRQS 95

Query: 385 GNYRLILNASLYPDMKL---TNMDKKGITFACMNSTSEGKDGLSTFALKFKDASIVEEFR 444
              ++  N  +   M +      DK  +  A   S  E KD L  F ++F   + VE  +
Sbjct: 96  KTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELKDEL--FCIRF---ASVENCK 155

Query: 445 AAVTEHKGKSSSSALK 456
           A + + K  + S   K
Sbjct: 156 AFMQKFKEVAESEEEK 165

[Close]

BLAST of Carg18816 vs. TAIR 10
Match: AT1G07140.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 45.4 bits (106), Expect = 1.4e-04
Identity = 40/129 (31.01%), Postives = 59/129 (45.74%), Query Frame = 0


Query: 325 MQEVAVETGEENERVVFNADSILFEFLD--GSWKERGKGELKVNVPTIGTGRARILMRAR 384
           ++EVAV TGEE+E  V +  S L+ F      WKERG G +K  +    TG+ R++MR  
Sbjct: 34  LEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKERGAGTVKF-LKHKNTGKIRLVMRQS 93

Query: 385 GNYRLILNASLYPDMKL---TNMDKKGITFACMNSTSEGKDGL-----------STFALK 438
              ++  N  +   M +      +K  +  A   +  E KD L            TF  K
Sbjct: 94  KTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFADGELKDELFCIRFASIENCKTFMQK 153

The following BLAST results are available for this feature:

BLAST of Carg18816 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025782.1	1.5e-242	100.00	Nuclear pore complex protein NUP50A, partial [Cucurbita argyrosperma subsp. argy...	[more]
KAG6593442.1	1.8e-240	99.35	Nuclear pore complex protein NUP50A, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022964514.1	2.6e-239	98.48	nuclear pore complex protein NUP50A-like [Cucurbita moschata]	[more]
XP_023514352.1	4.7e-236	97.18	nuclear pore complex protein NUP50A-like [Cucurbita pepo subsp. pepo]	[more]
XP_023000356.1	3.9e-235	96.96	nuclear pore complex protein NUP50A-like [Cucurbita maxima]	[more]

BLAST of Carg18816 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C829	3.0e-84	46.79	Nuclear pore complex protein NUP50A OS=Arabidopsis thaliana OX=3702 GN=NUP50A PE...	[more]
Q9LW88	4.0e-81	46.79	Nuclear pore complex protein NUP50B OS=Arabidopsis thaliana OX=3702 GN=NUP50B PE...	[more]
A0A0B4K7J2	2.0e-11	33.57	E3 SUMO-protein ligase RanBP2 OS=Drosophila melanogaster OX=7227 GN=Nup358 PE=1 ...	[more]

BLAST of Carg18816 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HNF6	1.3e-239	98.48	nuclear pore complex protein NUP50A-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KFN4	1.9e-235	96.96	nuclear pore complex protein NUP50A-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1GQJ1	3.5e-189	79.75	nuclear pore complex protein NUP50B-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JV59	1.9e-187	79.25	nuclear pore complex protein NUP50B-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A1S4E3Q0	9.6e-187	79.83	nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Carg18816 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52380.1	2.1e-85	46.79	NUP50 (Nucleoporin 50 kDa) protein	[more]
AT3G15970.1	2.9e-82	46.79	NUP50 (Nucleoporin 50 kDa) protein	[more]
AT5G58590.1	3.7e-05	30.40	RAN binding protein 1	[more]
AT2G30060.1	8.2e-05	32.35	Pleckstrin homology (PH) domain superfamily protein	[more]
AT1G07140.1	1.4e-04	31.01	Pleckstrin homology (PH) domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 319..445 e-value: 7.1E-16 score: 68.8
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 330..446 e-value: 5.8E-17 score: 62.1
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 322..451 score: 18.129864
IPR015007	Nuclear pore complex, NUP2/50/61	PFAM	PF08911	NUP50	coord: 12..73 e-value: 8.8E-14 score: 51.9
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 255..446 e-value: 1.3E-36 score: 128.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..261
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 1..461
None	No IPR available	PANTHER	PTHR23138:SF142	NUCLEAR PORE COMPLEX PROTEIN NUP50A-RELATED	coord: 1..461
None	No IPR available	CDD	cd13169	RanBD_NUP50_plant	coord: 332..449 e-value: 2.28884E-66 score: 206.531
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 322..447

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18816-RA	Carg18816-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
biological_process	GO:0051028	mRNA transport
biological_process	GO:0015031	protein transport
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0005096	GTPase activator activity