Carg18805 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg18805
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr08: 3819253 .. 3821401 (+)
RNA-Seq ExpressionCarg18805
SyntenyCarg18805
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCGTCGAAAAGGGTATGGAACATTTGAGCTTTTTATTTCGATTTCATCTTGGTAACGGTACTATCATCAATCGGAATAGAAGGTTACTGCGATACTATTGGCTGTGTTATGCAAAAGTGTTCAACGAATCACTTTCGCTGTTTGCTTGTGTGCTTTTGGGTAGAAATCGGGATGCTGGATTATCTGTTCTTGTTCGTTAATGAATGAATCGACTAGTTGAATGCCTCTTTTTTGTTTTGTCAATCTTACCAGTTGAATGCGAATTTCTTCGTGTTTGTCTTTCTCCTACTTCAAATCTTTATTCTCTACTTTATCTTCTCCGTCTCGATCGTCCCGTTTCTACTTTTCTTCATCTCGGAACCAGAGCACTAAAACTCATTCAGTCCGGCCATCTCCAAGACCAGCTCTCGGGCCTAAGTCGCCGGCGTCTTATTATGCCTCTCTCCTCTAATCTTGCGGCGTCCAAAAGGCGATAGAGCCTGGAACGCAGCTTCACGCTCGGATTTGGCAAATAGGTCTTGGAGTCAACCCTCTTTTGGCTACTAAACTAATCAATCTTTACTGCGTCTGCAACTCTTTGATAAATGCTCATCTCTTGTTCGATAGAATTTCCAAACGGAGTCTCTTCCTTTGGAATGTTATGATACGAGGTTATGCTTGGAATGGACCATATGAGGTTGCAATTTCACTTTACTATCAAATGCAGGATTATGGATTTGTGCCCGATAAATTTACCTTTCCATTTGTGCTCAAAGCTTGCTCGGCTCTTTCTGCAATGGAAGAGGGAAAGAAGATTCACGAACATGTCATAGGCGCTGGATTGGAGACTGATGTGTTTGTGGGTGCAGCCCTGATTGATATGTATGCTAAGTGTGGTTGTGTAGTGAGTGCCCAACAGGTGTTTGATAAAATGGTTGAGAGAGATGTTGTGTGTTGGAACTCCATGCTTGCAGCTTATTCCCAAAATGGGCAACCAGATGATTGTCTTGCTCTTTGTAGGGATATGGCGTATGCTGGAGTGAACCCCACCGTGGCGACGCTTGTCATCTCCATCTCAGCTTCAGCTGATAGTGTCCTTCTTCCTCAAGGGAAAGAGCTTCATGGTTATAGTTGGAGACATGGATTTGTGTTGAATGACAAGGTGAAAACTGCATTGGTGGATATGTATGCCAAGAGTGGCTCTGTACATGTTGCTAGGAGTCTGTTTGAGTTGTTGAAGGAGAAGAAGGTAGTCTCTTGGAACGCCATGATCGCTGGGTATGCAATGCATGGCCATGCTAATCAAGCTTTGGACTTGTTTGAGGAGATGAAAGAGATAGCTGTCCCTGATCATATAACTTTTGTTGGAGTTCTGGCTGCTTGCAGCCATGGTGGGTTGCTTAAGGGAAGATGTACTTCAGATCAATGTTAAGTGATTACATTTTACGTCCTACTGTTCAACATTACACTTGTATGATTGATCTACTTGGTCATTGTGGTCACTTGGAAGAAGCTTACAACCTCATAATGGAAATGAGAGTAGAGCCAGATGCTGGTGTGTGGGGTGCCTTGCTGCACTCGTGCAAAATCCATGGCAATGTGGAGTTCGGTGAGCTAGCGTTAAGGAAGTTGGTTGAGCTCGGACCCGACGACGGCGGGAACTATGTGATTTTGTTGAACATGTATGCACAAGCGGGTAAATGGGAAGGAGTTGCAAGACTAAGGGATGTCATGATGGATAGGGGGTTGAAGAAAAGTATAGCTTGTAGTTGGATAGAAGTGAGGAACAAAGTCCATGCCTTCTCGTCAGAAGATACTTCGCATCCCGAGTCTGAAGCAATCTATGCCGAGCTAAAACGGATAGGGAAGTTGATGAAAGAGGCTGGCTATGCACCACCAATCGGGTCGGTTTTCCACGATGTCGAAGACGATGAAAAGGCTGATATGGTGTGTGGTCACAGTGAAAGACTGGCCATTGCTTATGGACTCATCAGCACAGCTGTGGGAAGTAGGCTCTTGATTATCAAGAACCTTAGAGTTTGTGAGGACTGTCATGTTGCGATTAAGTTCATATCGAAGATCACGAAGAGAGAAATAAGTATTAGAGATGTTAATCGTTATCATCACTTCAAAGATGGACTTTGCTCCTGTGGTGACTTCTGGTGA

mRNA sequence

ATGTCCGTCGAAAAGGGTATGGAACATTTGAGCTTTTTATTTCGATTTCATCTTGGTAACGGTACTATCATCAATCGGAATAGAAGGTTACTGCGATACTATTGGCTGTGTTATGCAAAAGTGTTCAACGAATCACTTTCGCTGTTTGCTTGTGTGCTTTTGGGTAGAAATCGGGATGCTGGATTATCTGTTCTTGCGATAGAGCCTGGAACGCAGCTTCACGCTCGGATTTGGCAAATAGGTCTTGGAGTCAACCCTCTTTTGGCTACTAAACTAATCAATCTTTACTGCGTCTGCAACTCTTTGATAAATGCTCATCTCTTGTTCGATAGAATTTCCAAACGGAGTCTCTTCCTTTGGAATGTTATGATACGAGGTTATGCTTGGAATGGACCATATGAGGTTGCAATTTCACTTTACTATCAAATGCAGGATTATGGATTTGTGCCCGATAAATTTACCTTTCCATTTGTGCTCAAAGCTTGCTCGGCTCTTTCTGCAATGGAAGAGGGAAAGAAGATTCACGAACATGTCATAGGCGCTGGATTGGAGACTGATGTGTTTGTGGGTGCAGCCCTGATTGATATGTATGCTAAGTGTGGTTGTGTAGTGAGTGCCCAACAGGTGTTTGATAAAATGGTTGAGAGAGATGTTGTGTGTTGGAACTCCATGCTTGCAGCTTATTCCCAAAATGGGCAACCAGATGATTGTCTTGCTCTTTGTAGGGATATGGCGTATGCTGGAGTGAACCCCACCGTGGCGACGCTTGTCATCTCCATCTCAGCTTCAGCTGATAGTGTCCTTCTTCCTCAAGGGAAAGAGCTTCATGGTTATAGTTGGAGACATGGATTTGTGTTGAATGACAAGGTGAAAACTGCATTGGTGGATATGTATGCCAAGAGTGGCTCTGTACATGTTGCTAGGAGTCTGTTTGAGTTGTTGAAGGAGAAGAAGGTAGTCTCTTGGAACGCCATGATCGCTGGGTATGCAATGCATGGCCATGCTAATCAAGCTTTGGACTTGTTTGAGGAGATGAAAGAGATAGCTGTCCCTGATCATATAACTTTTGTTGGAGTTCTGGCTGCTTGCAGCCATGAAGCTTACAACCTCATAATGGAAATGAGAGTAGAGCCAGATGCTGGTGTGTGGGGTGCCTTGCTGCACTCGTGCAAAATCCATGGCAATGTGGAGTTCGGTGAGCTAGCGTTAAGGAAGTTGGTTGAGCTCGGACCCGACGACGGCGGGAACTATGTGATTTTGTTGAACATGTATGCACAAGCGGGTAAATGGGAAGGAGTTGCAAGACTAAGGGATGTCATGATGGATAGGGGGTTGAAGAAAAGTATAGCTTGTAGTTGGATAGAAGTGAGGAACAAAGTCCATGCCTTCTCGTCAGAAGATACTTCGCATCCCGAGTCTGAAGCAATCTATGCCGAGCTAAAACGGATAGGGAAGTTGATGAAAGAGGCTGGCTATGCACCACCAATCGGGTCGGTTTTCCACGATGTCGAAGACGATGAAAAGGCTGATATGGTGTGTGGTCACAGTGAAAGACTGGCCATTGCTTATGGACTCATCAGCACAGCTGTGGGAAGTAGGCTCTTGATTATCAAGAACCTTAGAGTTTGTGAGGACTGTCATGTTGCGATTAAGTTCATATCGAAGATCACGAAGAGAGAAATAAGTATTAGAGATGTTAATCGTTATCATCACTTCAAAGATGGACTTTGCTCCTGTGGTGACTTCTGGTGA

Coding sequence (CDS)

ATGTCCGTCGAAAAGGGTATGGAACATTTGAGCTTTTTATTTCGATTTCATCTTGGTAACGGTACTATCATCAATCGGAATAGAAGGTTACTGCGATACTATTGGCTGTGTTATGCAAAAGTGTTCAACGAATCACTTTCGCTGTTTGCTTGTGTGCTTTTGGGTAGAAATCGGGATGCTGGATTATCTGTTCTTGCGATAGAGCCTGGAACGCAGCTTCACGCTCGGATTTGGCAAATAGGTCTTGGAGTCAACCCTCTTTTGGCTACTAAACTAATCAATCTTTACTGCGTCTGCAACTCTTTGATAAATGCTCATCTCTTGTTCGATAGAATTTCCAAACGGAGTCTCTTCCTTTGGAATGTTATGATACGAGGTTATGCTTGGAATGGACCATATGAGGTTGCAATTTCACTTTACTATCAAATGCAGGATTATGGATTTGTGCCCGATAAATTTACCTTTCCATTTGTGCTCAAAGCTTGCTCGGCTCTTTCTGCAATGGAAGAGGGAAAGAAGATTCACGAACATGTCATAGGCGCTGGATTGGAGACTGATGTGTTTGTGGGTGCAGCCCTGATTGATATGTATGCTAAGTGTGGTTGTGTAGTGAGTGCCCAACAGGTGTTTGATAAAATGGTTGAGAGAGATGTTGTGTGTTGGAACTCCATGCTTGCAGCTTATTCCCAAAATGGGCAACCAGATGATTGTCTTGCTCTTTGTAGGGATATGGCGTATGCTGGAGTGAACCCCACCGTGGCGACGCTTGTCATCTCCATCTCAGCTTCAGCTGATAGTGTCCTTCTTCCTCAAGGGAAAGAGCTTCATGGTTATAGTTGGAGACATGGATTTGTGTTGAATGACAAGGTGAAAACTGCATTGGTGGATATGTATGCCAAGAGTGGCTCTGTACATGTTGCTAGGAGTCTGTTTGAGTTGTTGAAGGAGAAGAAGGTAGTCTCTTGGAACGCCATGATCGCTGGGTATGCAATGCATGGCCATGCTAATCAAGCTTTGGACTTGTTTGAGGAGATGAAAGAGATAGCTGTCCCTGATCATATAACTTTTGTTGGAGTTCTGGCTGCTTGCAGCCATGAAGCTTACAACCTCATAATGGAAATGAGAGTAGAGCCAGATGCTGGTGTGTGGGGTGCCTTGCTGCACTCGTGCAAAATCCATGGCAATGTGGAGTTCGGTGAGCTAGCGTTAAGGAAGTTGGTTGAGCTCGGACCCGACGACGGCGGGAACTATGTGATTTTGTTGAACATGTATGCACAAGCGGGTAAATGGGAAGGAGTTGCAAGACTAAGGGATGTCATGATGGATAGGGGGTTGAAGAAAAGTATAGCTTGTAGTTGGATAGAAGTGAGGAACAAAGTCCATGCCTTCTCGTCAGAAGATACTTCGCATCCCGAGTCTGAAGCAATCTATGCCGAGCTAAAACGGATAGGGAAGTTGATGAAAGAGGCTGGCTATGCACCACCAATCGGGTCGGTTTTCCACGATGTCGAAGACGATGAAAAGGCTGATATGGTGTGTGGTCACAGTGAAAGACTGGCCATTGCTTATGGACTCATCAGCACAGCTGTGGGAAGTAGGCTCTTGATTATCAAGAACCTTAGAGTTTGTGAGGACTGTCATGTTGCGATTAAGTTCATATCGAAGATCACGAAGAGAGAAATAAGTATTAGAGATGTTAATCGTTATCATCACTTCAAAGATGGACTTTGCTCCTGTGGTGACTTCTGGTGA

Protein sequence

MSVEKGMEHLSFLFRFHLGNGTIINRNRRLLRYYWLCYAKVFNESLSLFACVLLGRNRDAGLSVLAIEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIRGYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIGAGLETDVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLALCRDMAYAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYAKSGSVHVARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEMKEIAVPDHITFVGVLAACSHEAYNLIMEMRVEPDAGVWGALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYAQAGKWEGVARLRDVMMDRGLKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPPIGSVFHDVEDDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNLRVCEDCHVAIKFISKITKREISIRDVNRYHHFKDGLCSCGDFW
Homology
BLAST of Carg18805 vs. NCBI nr
Match: KAG7025792.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1196.4 bits (3094), Expect = 0.0e+00
Identity = 583/583 (100.00%), Postives = 583/583 (100.00%), Query Frame = 0

Query: 1   MSVEKGMEHLSFLFRFHLGNGTIINRNRRLLRYYWLCYAKVFNESLSLFACVLLGRNRDA 60
           MSVEKGMEHLSFLFRFHLGNGTIINRNRRLLRYYWLCYAKVFNESLSLFACVLLGRNRDA
Sbjct: 1   MSVEKGMEHLSFLFRFHLGNGTIINRNRRLLRYYWLCYAKVFNESLSLFACVLLGRNRDA 60

Query: 61  GLSVLAIEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLW 120
           GLSVLAIEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLW
Sbjct: 61  GLSVLAIEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLW 120

Query: 121 NVMIRGYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIG 180
           NVMIRGYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIG
Sbjct: 121 NVMIRGYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIG 180

Query: 181 AGLETDVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLAL 240
           AGLETDVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLAL
Sbjct: 181 AGLETDVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLAL 240

Query: 241 CRDMAYAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYAK 300
           CRDMAYAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYAK
Sbjct: 241 CRDMAYAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYAK 300

Query: 301 SGSVHVARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEMKEIAVPDHITFVGVL 360
           SGSVHVARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEMKEIAVPDHITFVGVL
Sbjct: 301 SGSVHVARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEMKEIAVPDHITFVGVL 360

Query: 361 AACSHEAYNLIMEMRVEPDAGVWGALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVIL 420
           AACSHEAYNLIMEMRVEPDAGVWGALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVIL
Sbjct: 361 AACSHEAYNLIMEMRVEPDAGVWGALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVIL 420

Query: 421 LNMYAQAGKWEGVARLRDVMMDRGLKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAEL 480
           LNMYAQAGKWEGVARLRDVMMDRGLKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAEL
Sbjct: 421 LNMYAQAGKWEGVARLRDVMMDRGLKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAEL 480

Query: 481 KRIGKLMKEAGYAPPIGSVFHDVEDDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNL 540
           KRIGKLMKEAGYAPPIGSVFHDVEDDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNL
Sbjct: 481 KRIGKLMKEAGYAPPIGSVFHDVEDDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNL 540

Query: 541 RVCEDCHVAIKFISKITKREISIRDVNRYHHFKDGLCSCGDFW 584
           RVCEDCHVAIKFISKITKREISIRDVNRYHHFKDGLCSCGDFW
Sbjct: 541 RVCEDCHVAIKFISKITKREISIRDVNRYHHFKDGLCSCGDFW 583

BLAST of Carg18805 vs. NCBI nr
Match: XP_022964400.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata])

HSP 1 Score: 1001.9 bits (2589), Expect = 2.3e-288
Identity = 496/559 (88.73%), Postives = 506/559 (90.52%), Query Frame = 0

Query: 66  AIEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIR 125
           AIEPG QLHARIWQ+GLG NPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIR
Sbjct: 72  AIEPGKQLHARIWQMGLGFNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIR 131

Query: 126 GYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIGAGLET 185
           GYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIGAGLET
Sbjct: 132 GYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIGAGLET 191

Query: 186 DVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLALCRDMA 245
           DVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCL+LCR+MA
Sbjct: 192 DVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLSLCREMA 251

Query: 246 YAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYAKSGSVH 305
           YAGVNPT  TLVISISASADSVLLPQGKELHGYSWRHGF LND+VKTALVDMYAK GSVH
Sbjct: 252 YAGVNPTEGTLVISISASADSVLLPQGKELHGYSWRHGFGLNDRVKTALVDMYAKCGSVH 311

Query: 306 VARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEMKEIAVPDHITFVGVLAACS- 365
           VARSLFELLKEK+VVSWNAMI+GYAMHGHANQALDLF+EMKEIA+ DHITFVGVLAACS 
Sbjct: 312 VARSLFELLKEKRVVSWNAMISGYAMHGHANQALDLFKEMKEIALLDHITFVGVLAACSQ 371

Query: 366 ----------------------------------------HEAYNLIMEMRVEPDAGVWG 425
                                                    EAYNLIMEMRVEPDAGVWG
Sbjct: 372 VGCLIKGKMYFRSMLSDYIIRPTVQHYTCMIDLLGHCGHLEEAYNLIMEMRVEPDAGVWG 431

Query: 426 ALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYAQAGKWEGVARLRDVMMDRG 485
           ALLHSCKIHGNVE GELALRKLVEL PD+GGNYVIL NMYAQAGKWEGVARLRDVMMDRG
Sbjct: 432 ALLHSCKIHGNVELGELALRKLVELEPDNGGNYVILSNMYAQAGKWEGVARLRDVMMDRG 491

Query: 486 LKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPPIGSVFHDVE 545
           LKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAP IGSVFHDVE
Sbjct: 492 LKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPQIGSVFHDVE 551

Query: 546 DDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNLRVCEDCHVAIKFISKITKREISIR 584
           DDEKADMVCGHSERLAIAYGLISTA+GSRLLIIKNLRVCEDCHVAIKFISKITKREISIR
Sbjct: 552 DDEKADMVCGHSERLAIAYGLISTALGSRLLIIKNLRVCEDCHVAIKFISKITKREISIR 611

BLAST of Carg18805 vs. NCBI nr
Match: XP_038898350.1 (pentatricopeptide repeat-containing protein At4g21065-like [Benincasa hispida] >XP_038898351.1 pentatricopeptide repeat-containing protein At4g21065-like [Benincasa hispida])

HSP 1 Score: 916.0 bits (2366), Expect = 1.6e-262
Identity = 449/559 (80.32%), Postives = 480/559 (85.87%), Query Frame = 0

Query: 66  AIEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIR 125
           AIEPG QLHAR+WQ+G+  NPLLATKL+NLYC+CNSL NAHLLFDRISKR+LFLWNVMIR
Sbjct: 84  AIEPGKQLHARMWQMGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIR 143

Query: 126 GYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIGAGLET 185
           GYAWNGPYEVAISLYYQMQD+G VPDK+TFPFVLKACSALSAMEEGKKIH+ V+  GLE+
Sbjct: 144 GYAWNGPYEVAISLYYQMQDHGLVPDKYTFPFVLKACSALSAMEEGKKIHKDVLRIGLES 203

Query: 186 DVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLALCRDMA 245
           DVFVGAALIDMYAKCGCV  A+QVFDK+ ERD VCWNSMLA YSQNGQPD+ LALCR MA
Sbjct: 204 DVFVGAALIDMYAKCGCVEGARQVFDKIDERDAVCWNSMLATYSQNGQPDESLALCRVMA 263

Query: 246 YAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYAKSGSVH 305
           + GV PT  TLVISISASAD+ LLPQGKELHGYSWRHGF  NDKVKTALVDMYAKSGSV+
Sbjct: 264 FDGVKPTEGTLVISISASADNGLLPQGKELHGYSWRHGFESNDKVKTALVDMYAKSGSVN 323

Query: 306 VARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEMKEIAVPDHITFVGVLAACSH 365
           VARSLFE+L+EK+VVSWNAMI GYAMHGHA +ALDLFE+MK  A+PDHITFVGVLAACSH
Sbjct: 324 VARSLFEILEEKRVVSWNAMITGYAMHGHAKEALDLFEKMKGKALPDHITFVGVLAACSH 383

Query: 366 -----------------------------------------EAYNLIMEMRVEPDAGVWG 425
                                                    EAYNLIMEMRVEPDAGVWG
Sbjct: 384 GGLLNEGKMYFRSMVSDYIICPTVQHYTCMIDLLGHCGHLEEAYNLIMEMRVEPDAGVWG 443

Query: 426 ALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYAQAGKWEGVARLRDVMMDRG 485
           ALLHSCKIHGNVE GELAL KL+EL PDDGGNYVIL NMYAQAG WEGVARLRD+MMD+G
Sbjct: 444 ALLHSCKIHGNVEMGELALEKLIELEPDDGGNYVILSNMYAQAGNWEGVARLRDLMMDKG 503

Query: 486 LKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPPIGSVFHDVE 545
           LKKSIACSWIEVRNKVHAF SEDTSHPESEAIYAELK IGKLMKEAGYAP IGSVFHDVE
Sbjct: 504 LKKSIACSWIEVRNKVHAFLSEDTSHPESEAIYAELKWIGKLMKEAGYAPQIGSVFHDVE 563

Query: 546 DDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNLRVCEDCHVAIKFISKITKREISIR 584
           DDEK DMVC HSERLAIA+GLIST VG++LLIIKNLRVCEDCHVAIKFISKIT+REI+IR
Sbjct: 564 DDEKVDMVCCHSERLAIAFGLISTPVGTKLLIIKNLRVCEDCHVAIKFISKITEREITIR 623

BLAST of Carg18805 vs. NCBI nr
Match: XP_022150877.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Momordica charantia] >XP_022150878.1 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Momordica charantia] >XP_022150879.1 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Momordica charantia] >XP_022150880.1 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Momordica charantia] >XP_022150881.1 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Momordica charantia] >XP_022150882.1 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Momordica charantia])

HSP 1 Score: 905.2 bits (2338), Expect = 2.9e-259
Identity = 445/559 (79.61%), Postives = 473/559 (84.62%), Query Frame = 0

Query: 66  AIEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIR 125
           AIEPG QLHARI+Q+GLG NPLLATKL++LY  CNSL NAHLLFDRISKR+LFLWNVMIR
Sbjct: 68  AIEPGKQLHARIFQVGLGFNPLLATKLVSLYGACNSLTNAHLLFDRISKRNLFLWNVMIR 127

Query: 126 GYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIGAGLET 185
           GYAWNGPYE AISLYYQMQD+GF PDKFTFPFVLKACSALS MEEGKKIH+HVI  GLET
Sbjct: 128 GYAWNGPYEAAISLYYQMQDHGFAPDKFTFPFVLKACSALSVMEEGKKIHQHVIRTGLET 187

Query: 186 DVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLALCRDMA 245
           DVFVGAALIDMYAKCGCV SA+QVFDK++ERD VCWNSMLAAYSQNGQP D L+LC +MA
Sbjct: 188 DVFVGAALIDMYAKCGCVESARQVFDKIIERDAVCWNSMLAAYSQNGQPGDSLSLCGEMA 247

Query: 246 YAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYAKSGSVH 305
           +A V PT  TLVISISASADS  LPQGKELHGYSWRHGF LNDKVKTALVDMYAKSG V 
Sbjct: 248 FAEVKPTEGTLVISISASADSATLPQGKELHGYSWRHGFGLNDKVKTALVDMYAKSGFVK 307

Query: 306 VARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEMKEIAVPDHITFVGVLAACSH 365
           VARSLFE+L +K+VVSWN MI GYAMHGHA +ALDLFEEMK+ A+PD+ITFVGVLAACSH
Sbjct: 308 VARSLFEMLNKKRVVSWNTMITGYAMHGHATEALDLFEEMKKKAMPDYITFVGVLAACSH 367

Query: 366 -----------------------------------------EAYNLIMEMRVEPDAGVWG 425
                                                    EAYNLIMEMRVEPDAGVWG
Sbjct: 368 GGLLDEGKMYFRSMVIDCLIDPTVQHYTCMIDLLGHCGHLEEAYNLIMEMRVEPDAGVWG 427

Query: 426 ALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYAQAGKWEGVARLRDVMMDRG 485
           ALLHSCKIHGNVE GELAL KL EL PDDGGN+VIL NMYAQAGKWEGVAR+RD+MMDRG
Sbjct: 428 ALLHSCKIHGNVEMGELALEKLSELEPDDGGNFVILSNMYAQAGKWEGVARMRDLMMDRG 487

Query: 486 LKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPPIGSVFHDVE 545
           LKKSIACSWIEV+NKVHAF SEDTSHP+ EAIYAELKRIGKLMKEAGYAP   SVFHDVE
Sbjct: 488 LKKSIACSWIEVKNKVHAFLSEDTSHPKFEAIYAELKRIGKLMKEAGYAPQTSSVFHDVE 547

Query: 546 DDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNLRVCEDCHVAIKFISKITKREISIR 584
           DDEK DMVC HSERLAIA+GLISTA G+RLLI KNLRVCEDCHVAIKFISKI  REI+IR
Sbjct: 548 DDEKVDMVCSHSERLAIAFGLISTAAGTRLLITKNLRVCEDCHVAIKFISKIMGREITIR 607

BLAST of Carg18805 vs. NCBI nr
Match: XP_031744701.1 (pentatricopeptide repeat-containing protein At4g21065 [Cucumis sativus] >XP_031744702.1 pentatricopeptide repeat-containing protein At4g21065 [Cucumis sativus])

HSP 1 Score: 904.4 bits (2336), Expect = 5.0e-259
Identity = 442/559 (79.07%), Postives = 480/559 (85.87%), Query Frame = 0

Query: 66  AIEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIR 125
           AIEPG QLHARI Q+G+  NPLLATKL+NLYC+CNSL NAHLLFDRISKR+LFLWNVMIR
Sbjct: 80  AIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIR 139

Query: 126 GYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIGAGLET 185
           GYAWNGPYE+AISLYYQM+DYG VPDKFTFPFVLKACSALSAMEEGKKIH+ VI +GLE+
Sbjct: 140 GYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLES 199

Query: 186 DVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLALCRDMA 245
           DVFVGAALIDMYAKCGCV SA+QVFDK+ ERDVVCWNSMLA YSQNGQPD+ LALCR MA
Sbjct: 200 DVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMA 259

Query: 246 YAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYAKSGSVH 305
           + G+ PT  T VISI+ASAD+ LLPQGKELHGYSWRHGF  NDKVKTAL+DMYAKSGSV+
Sbjct: 260 FNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVN 319

Query: 306 VARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEMKEIAVPDHITFVGVLAACSH 365
           VARSLFELL+EK+VVSWNAMI GYAMHGHAN+ALDLF+EMK   +PDHITFVGVLAACSH
Sbjct: 320 VARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVLPDHITFVGVLAACSH 379

Query: 366 -----------------------------------------EAYNLIMEMRVEPDAGVWG 425
                                                    EAY LIMEMRVEPDAGVWG
Sbjct: 380 GGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWG 439

Query: 426 ALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYAQAGKWEGVARLRDVMMDRG 485
           ALLHSCKIHGNVE GELAL KLVEL PDDGGNYVIL NMYAQAGKW+GVARLRD+MM++G
Sbjct: 440 ALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKG 499

Query: 486 LKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPPIGSVFHDVE 545
           LKKSIACSWIEV NKVHAF SEDTSHP+SEAIYAELKR GKLMKEAGYAP +GSVFHDVE
Sbjct: 500 LKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVE 559

Query: 546 DDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNLRVCEDCHVAIKFISKITKREISIR 584
           DDEK DMV  HSERLAIA+GLIST+ G++LLIIKNLR+CEDCHVAIKFISKIT+REI+IR
Sbjct: 560 DDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKITEREITIR 619

BLAST of Carg18805 vs. ExPASy Swiss-Prot
Match: Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 6.8e-118
Identity = 222/566 (39.22%), Postives = 330/566 (58.30%), Query Frame = 0

Query: 66  AIEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIR 125
           ++    ++H  I   G   +P LATKLI +Y    S+  A  +FD+  KR++++WN + R
Sbjct: 92  SLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFR 151

Query: 126 GYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSA----LSAMEEGKKIHEHVIGA 185
                G  E  + LY++M   G   D+FT+ +VLKAC A    ++ + +GK+IH H+   
Sbjct: 152 ALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRR 211

Query: 186 GLETDVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLALC 245
           G  + V++   L+DMYA+ GCV  A  VF  M  R+VV W++M+A Y++NG+  + L   
Sbjct: 212 GYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTF 271

Query: 246 RDM--AYAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYA 305
           R+M       +P   T+V  + A A    L QGK +HGY  R G      V +ALV MY 
Sbjct: 272 REMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYG 331

Query: 306 KSGSVHVARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEM-KEIAVPDHITFVG 365
           + G + V + +F+ + ++ VVSWN++I+ Y +HG+  +A+ +FEEM    A P  +TFV 
Sbjct: 332 RCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391

Query: 366 VLAACSH-----------------------------------------EAYNLIMEMRVE 425
           VL ACSH                                         EA  ++ +MR E
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451

Query: 426 PDAGVWGALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYAQAGKWEGVARLR 485
           P   VWG+LL SC+IHGNVE  E A R+L  L P + GNYV+L ++YA+A  W+ V R++
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVK 511

Query: 486 DVMMDRGLKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPPIG 545
            ++  RGL+K     W+EVR K+++F S D  +P  E I+A L ++ + MKE GY P   
Sbjct: 512 KLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTK 571

Query: 546 SVFHDVEDDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNLRVCEDCHVAIKFISKIT 584
            V +++E +EK  +V GHSE+LA+A+GLI+T+ G  + I KNLR+CEDCH+  KFISK  
Sbjct: 572 GVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFM 631

BLAST of Carg18805 vs. ExPASy Swiss-Prot
Match: Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 3.4e-117
Identity = 212/518 (40.93%), Postives = 307/518 (59.27%), Query Frame = 0

Query: 108 LFDRISKRSLFLWNVMIRGYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSA 167
           +F+ + ++ +  +N +I GYA +G YE A+ +  +M      PD FT   VL   S    
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD 257

Query: 168 MEEGKKIHEHVIGAGLETDVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAA 227
           + +GK+IH +VI  G+++DV++G++L+DMYAK   +  +++VF ++  RD + WNS++A 
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 317

Query: 228 YSQNGQPDDCLALCRDMAYAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLN 287
           Y QNG+ ++ L L R M  A V P        I A A    L  GK+LHGY  R GF  N
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 377

Query: 288 DKVKTALVDMYAKSGSVHVARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEMKE 347
             + +ALVDMY+K G++  AR +F+ +     VSW A+I G+A+HGH ++A+ LFEEMK 
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437

Query: 348 IAV-PDHITFVGVLAACSH----------------------------------------- 407
             V P+ + FV VL ACSH                                         
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497

Query: 408 EAYNLIMEMRVEPDAGVWGALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYA 467
           EAYN I +M VEP   VW  LL SC +H N+E  E    K+  +  ++ G YV++ NMYA
Sbjct: 498 EAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYA 557

Query: 468 QAGKWEGVARLRDVMMDRGLKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGK 527
             G+W+ +A+LR  M  +GL+K  ACSWIE++NK H F S D SHP  + I   LK + +
Sbjct: 558 SNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVME 617

Query: 528 LMKEAGYAPPIGSVFHDVEDDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNLRVCED 584
            M++ GY      V HDV+++ K +++ GHSERLA+A+G+I+T  G+ + + KN+R+C D
Sbjct: 618 QMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTD 677

BLAST of Carg18805 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 9.2e-115
Identity = 220/559 (39.36%), Postives = 325/559 (58.14%), Query Frame = 0

Query: 67  IEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIRG 126
           I  G ++H    + G      ++T L+++Y  C SL  A  LFD + +R++  WN MI  
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311

Query: 127 YAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIGAGLETD 186
           Y  N   + A+ ++ +M D G  P   +    L AC+ L  +E G+ IH+  +  GL+ +
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 371

Query: 187 VFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLALCRDMAY 246
           V V  +LI MY KC  V +A  +F K+  R +V WN+M+  ++QNG+P D L     M  
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431

Query: 247 AGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYAKSGSVHV 306
             V P   T V  I+A A+  +    K +HG   R     N  V TALVDMYAK G++ +
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI 491

Query: 307 ARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEMKEIAV-PDHITFVGVLAACSH 366
           AR +F+++ E+ V +WNAMI GY  HG    AL+LFEEM++  + P+ +TF+ V++ACSH
Sbjct: 492 ARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSH 551

Query: 367 -----------------------------------------EAYNLIMEMRVEPDAGVWG 426
                                                    EA++ IM+M V+P   V+G
Sbjct: 552 SGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYG 611

Query: 427 ALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYAQAGKWEGVARLRDVMMDRG 486
           A+L +C+IH NV F E A  +L EL PDDGG +V+L N+Y  A  WE V ++R  M+ +G
Sbjct: 612 AMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQG 671

Query: 487 LKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPPIGSVFHDVE 546
           L+K+  CS +E++N+VH+F S  T+HP+S+ IYA L+++   +KEAGY P    V   VE
Sbjct: 672 LRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVE 731

Query: 547 DDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNLRVCEDCHVAIKFISKITKREISIR 584
           +D K  ++  HSE+LAI++GL++T  G+ + + KNLRVC DCH A K+IS +T REI +R
Sbjct: 732 NDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVR 791

BLAST of Carg18805 vs. ExPASy Swiss-Prot
Match: Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.5e-112
Identity = 223/625 (35.68%), Postives = 326/625 (52.16%), Query Frame = 0

Query: 67  IEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIRG 126
           +E G ++H+ I ++GL  N  ++  L+N+Y  C   + A  +FDR+  R +  WN MI  
Sbjct: 162 METGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIAL 221

Query: 127 YAWNGPYEVAISLYYQMQDYGFV--------------------------------PDKFT 186
           +   G  ++A++ + QM +   V                                PD+FT
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFT 281

Query: 187 FPFVLKACSALSAMEEGKKIHEHVIGAGLETDVFVGAALIDMYAKCGCVVSAQQ------ 246
              VL AC+ L  +  GK+IH H++  G +    V  ALI MY++CG V +A++      
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341

Query: 247 ---------------------------VFDKMVERDVVCWNSMLAAYSQNGQPDDCLALC 306
                                      +F  + +RDVV W +M+  Y Q+G   + + L 
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLF 401

Query: 307 RDMAYAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYAKS 366
           R M   G  P   TL   +S ++    L  GK++HG + + G + +  V  AL+ MYAK+
Sbjct: 402 RSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKA 461

Query: 367 GSVHVARSLFELLK-EKKVVSWNAMIAGYAMHGHANQALDLFEEM-KEIAVPDHITFVGV 426
           G++  A   F+L++ E+  VSW +MI   A HGHA +AL+LFE M  E   PDHIT+VGV
Sbjct: 462 GNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521

Query: 427 LAACSH-----------------------------------------EAYNLIMEMRVEP 486
            +AC+H                                         EA   I +M +EP
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581

Query: 487 DAGVWGALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYAQAGKWEGVARLRD 546
           D   WG+LL +C++H N++ G++A  +L+ L P++ G Y  L N+Y+  GKWE  A++R 
Sbjct: 582 DVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641

Query: 547 VMMDRGLKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPPIGS 584
            M D  +KK    SWIEV++KVH F  ED +HPE   IY  +K+I   +K+ GY P   S
Sbjct: 642 SMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTAS 701

BLAST of Carg18805 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 9.5e-112
Identity = 209/535 (39.07%), Postives = 311/535 (58.13%), Query Frame = 0

Query: 92  LINLYCVCNSLINAHLLFDRISKRSLFLWNVMIRGYAWNGPYEVAISLYYQMQDYGFVPD 151
           L+++Y  C  L +A  +F  +S RS+  +  MI GYA  G    A+ L+ +M++ G  PD
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396

Query: 152 KFTFPFVLKACSALSAMEEGKKIHEHVIGAGLETDVFVGAALIDMYAKCGCVVSAQQVFD 211
            +T   VL  C+    ++EGK++HE +    L  D+FV  AL+DMYAKCG +  A+ VF 
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 456

Query: 212 KMVERDVVCWNSMLAAYSQNGQPDDCLALCR-DMAYAGVNPTVATLVISISASADSVLLP 271
           +M  +D++ WN+++  YS+N   ++ L+L    +     +P   T+   + A A      
Sbjct: 457 EMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 516

Query: 272 QGKELHGYSWRHGFVLNDKVKTALVDMYAKSGSVHVARSLFELLKEKKVVSWNAMIAGYA 331
           +G+E+HGY  R+G+  +  V  +LVDMYAK G++ +A  LF+ +  K +VSW  MIAGY 
Sbjct: 517 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG 576

Query: 332 MHGHANQALDLFEEMKEIAV-PDHITFVGVLAACSH------------------------ 391
           MHG   +A+ LF +M++  +  D I+FV +L ACSH                        
Sbjct: 577 MHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 636

Query: 392 -----------------EAYNLIMEMRVEPDAGVWGALLHSCKIHGNVEFGELALRKLVE 451
                            +AY  I  M + PDA +WGALL  C+IH +V+  E    K+ E
Sbjct: 637 EHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE 696

Query: 452 LGPDDGGNYVILLNMYAQAGKWEGVARLRDVMMDRGLKKSIACSWIEVRNKVHAFSSEDT 511
           L P++ G YV++ N+YA+A KWE V RLR  +  RGL+K+  CSWIE++ +V+ F + D+
Sbjct: 697 LEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDS 756

Query: 512 SHPESEAIYAELKRIGKLMKEAGYAPPIGSVFHDVEDDEKADMVCGHSERLAIAYGLIST 571
           S+PE+E I A L+++   M E GY+P       D E+ EK + +CGHSE+LA+A G+IS+
Sbjct: 757 SNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISS 816

Query: 572 AVGSRLLIIKNLRVCEDCHVAIKFISKITKREISIRDVNRYHHFKDGLCSCGDFW 584
             G  + + KNLRVC DCH   KF+SK+T+REI +RD NR+H FKDG CSC  FW
Sbjct: 817 GHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871

BLAST of Carg18805 vs. ExPASy TrEMBL
Match: A0A6J1HKP7 (pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita moschata OX=3662 GN=LOC111464433 PE=3 SV=1)

HSP 1 Score: 1001.9 bits (2589), Expect = 1.1e-288
Identity = 496/559 (88.73%), Postives = 506/559 (90.52%), Query Frame = 0

Query: 66  AIEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIR 125
           AIEPG QLHARIWQ+GLG NPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIR
Sbjct: 72  AIEPGKQLHARIWQMGLGFNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIR 131

Query: 126 GYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIGAGLET 185
           GYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIGAGLET
Sbjct: 132 GYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIGAGLET 191

Query: 186 DVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLALCRDMA 245
           DVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCL+LCR+MA
Sbjct: 192 DVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLSLCREMA 251

Query: 246 YAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYAKSGSVH 305
           YAGVNPT  TLVISISASADSVLLPQGKELHGYSWRHGF LND+VKTALVDMYAK GSVH
Sbjct: 252 YAGVNPTEGTLVISISASADSVLLPQGKELHGYSWRHGFGLNDRVKTALVDMYAKCGSVH 311

Query: 306 VARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEMKEIAVPDHITFVGVLAACS- 365
           VARSLFELLKEK+VVSWNAMI+GYAMHGHANQALDLF+EMKEIA+ DHITFVGVLAACS 
Sbjct: 312 VARSLFELLKEKRVVSWNAMISGYAMHGHANQALDLFKEMKEIALLDHITFVGVLAACSQ 371

Query: 366 ----------------------------------------HEAYNLIMEMRVEPDAGVWG 425
                                                    EAYNLIMEMRVEPDAGVWG
Sbjct: 372 VGCLIKGKMYFRSMLSDYIIRPTVQHYTCMIDLLGHCGHLEEAYNLIMEMRVEPDAGVWG 431

Query: 426 ALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYAQAGKWEGVARLRDVMMDRG 485
           ALLHSCKIHGNVE GELALRKLVEL PD+GGNYVIL NMYAQAGKWEGVARLRDVMMDRG
Sbjct: 432 ALLHSCKIHGNVELGELALRKLVELEPDNGGNYVILSNMYAQAGKWEGVARLRDVMMDRG 491

Query: 486 LKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPPIGSVFHDVE 545
           LKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAP IGSVFHDVE
Sbjct: 492 LKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPQIGSVFHDVE 551

Query: 546 DDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNLRVCEDCHVAIKFISKITKREISIR 584
           DDEKADMVCGHSERLAIAYGLISTA+GSRLLIIKNLRVCEDCHVAIKFISKITKREISIR
Sbjct: 552 DDEKADMVCGHSERLAIAYGLISTALGSRLLIIKNLRVCEDCHVAIKFISKITKREISIR 611

BLAST of Carg18805 vs. ExPASy TrEMBL
Match: A0A6J1DBD3 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111018927 PE=3 SV=1)

HSP 1 Score: 905.2 bits (2338), Expect = 1.4e-259
Identity = 445/559 (79.61%), Postives = 473/559 (84.62%), Query Frame = 0

Query: 66  AIEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIR 125
           AIEPG QLHARI+Q+GLG NPLLATKL++LY  CNSL NAHLLFDRISKR+LFLWNVMIR
Sbjct: 68  AIEPGKQLHARIFQVGLGFNPLLATKLVSLYGACNSLTNAHLLFDRISKRNLFLWNVMIR 127

Query: 126 GYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIGAGLET 185
           GYAWNGPYE AISLYYQMQD+GF PDKFTFPFVLKACSALS MEEGKKIH+HVI  GLET
Sbjct: 128 GYAWNGPYEAAISLYYQMQDHGFAPDKFTFPFVLKACSALSVMEEGKKIHQHVIRTGLET 187

Query: 186 DVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLALCRDMA 245
           DVFVGAALIDMYAKCGCV SA+QVFDK++ERD VCWNSMLAAYSQNGQP D L+LC +MA
Sbjct: 188 DVFVGAALIDMYAKCGCVESARQVFDKIIERDAVCWNSMLAAYSQNGQPGDSLSLCGEMA 247

Query: 246 YAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYAKSGSVH 305
           +A V PT  TLVISISASADS  LPQGKELHGYSWRHGF LNDKVKTALVDMYAKSG V 
Sbjct: 248 FAEVKPTEGTLVISISASADSATLPQGKELHGYSWRHGFGLNDKVKTALVDMYAKSGFVK 307

Query: 306 VARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEMKEIAVPDHITFVGVLAACSH 365
           VARSLFE+L +K+VVSWN MI GYAMHGHA +ALDLFEEMK+ A+PD+ITFVGVLAACSH
Sbjct: 308 VARSLFEMLNKKRVVSWNTMITGYAMHGHATEALDLFEEMKKKAMPDYITFVGVLAACSH 367

Query: 366 -----------------------------------------EAYNLIMEMRVEPDAGVWG 425
                                                    EAYNLIMEMRVEPDAGVWG
Sbjct: 368 GGLLDEGKMYFRSMVIDCLIDPTVQHYTCMIDLLGHCGHLEEAYNLIMEMRVEPDAGVWG 427

Query: 426 ALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYAQAGKWEGVARLRDVMMDRG 485
           ALLHSCKIHGNVE GELAL KL EL PDDGGN+VIL NMYAQAGKWEGVAR+RD+MMDRG
Sbjct: 428 ALLHSCKIHGNVEMGELALEKLSELEPDDGGNFVILSNMYAQAGKWEGVARMRDLMMDRG 487

Query: 486 LKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPPIGSVFHDVE 545
           LKKSIACSWIEV+NKVHAF SEDTSHP+ EAIYAELKRIGKLMKEAGYAP   SVFHDVE
Sbjct: 488 LKKSIACSWIEVKNKVHAFLSEDTSHPKFEAIYAELKRIGKLMKEAGYAPQTSSVFHDVE 547

Query: 546 DDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNLRVCEDCHVAIKFISKITKREISIR 584
           DDEK DMVC HSERLAIA+GLISTA G+RLLI KNLRVCEDCHVAIKFISKI  REI+IR
Sbjct: 548 DDEKVDMVCSHSERLAIAFGLISTAAGTRLLITKNLRVCEDCHVAIKFISKIMGREITIR 607

BLAST of Carg18805 vs. ExPASy TrEMBL
Match: A0A0A0KAF0 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G446825 PE=3 SV=1)

HSP 1 Score: 904.4 bits (2336), Expect = 2.4e-259
Identity = 442/559 (79.07%), Postives = 480/559 (85.87%), Query Frame = 0

Query: 66  AIEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIR 125
           AIEPG QLHARI Q+G+  NPLLATKL+NLYC+CNSL NAHLLFDRISKR+LFLWNVMIR
Sbjct: 16  AIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIR 75

Query: 126 GYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIGAGLET 185
           GYAWNGPYE+AISLYYQM+DYG VPDKFTFPFVLKACSALSAMEEGKKIH+ VI +GLE+
Sbjct: 76  GYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLES 135

Query: 186 DVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLALCRDMA 245
           DVFVGAALIDMYAKCGCV SA+QVFDK+ ERDVVCWNSMLA YSQNGQPD+ LALCR MA
Sbjct: 136 DVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMA 195

Query: 246 YAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYAKSGSVH 305
           + G+ PT  T VISI+ASAD+ LLPQGKELHGYSWRHGF  NDKVKTAL+DMYAKSGSV+
Sbjct: 196 FNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVN 255

Query: 306 VARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEMKEIAVPDHITFVGVLAACSH 365
           VARSLFELL+EK+VVSWNAMI GYAMHGHAN+ALDLF+EMK   +PDHITFVGVLAACSH
Sbjct: 256 VARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVLPDHITFVGVLAACSH 315

Query: 366 -----------------------------------------EAYNLIMEMRVEPDAGVWG 425
                                                    EAY LIMEMRVEPDAGVWG
Sbjct: 316 GGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWG 375

Query: 426 ALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYAQAGKWEGVARLRDVMMDRG 485
           ALLHSCKIHGNVE GELAL KLVEL PDDGGNYVIL NMYAQAGKW+GVARLRD+MM++G
Sbjct: 376 ALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKG 435

Query: 486 LKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPPIGSVFHDVE 545
           LKKSIACSWIEV NKVHAF SEDTSHP+SEAIYAELKR GKLMKEAGYAP +GSVFHDVE
Sbjct: 436 LKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGYAPQVGSVFHDVE 495

Query: 546 DDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNLRVCEDCHVAIKFISKITKREISIR 584
           DDEK DMV  HSERLAIA+GLIST+ G++LLIIKNLR+CEDCHVAIKFISKIT+REI+IR
Sbjct: 496 DDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKITEREITIR 555

BLAST of Carg18805 vs. ExPASy TrEMBL
Match: A0A1S3CG77 (pentatricopeptide repeat-containing protein At4g21065-like OS=Cucumis melo OX=3656 GN=LOC103500579 PE=3 SV=1)

HSP 1 Score: 900.6 bits (2326), Expect = 3.5e-258
Identity = 439/559 (78.53%), Postives = 476/559 (85.15%), Query Frame = 0

Query: 66  AIEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIR 125
           AIEPG QLHARIWQ+G+  NPLLATKL+NLYC+CNSL NA LLFDRISKR+ FLWNVMIR
Sbjct: 84  AIEPGKQLHARIWQMGISFNPLLATKLVNLYCICNSLTNARLLFDRISKRNQFLWNVMIR 143

Query: 126 GYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIGAGLET 185
           GYAWNGPYE+AISLYYQM+DYG VPDKFTFPFVLKACSALSAMEEGKKIH+ VI  GLE+
Sbjct: 144 GYAWNGPYEIAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRTGLES 203

Query: 186 DVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLALCRDMA 245
           DVFVGAALIDMYAKCGCV SA+QVFDK+ ERDVVCWNSMLA YSQNGQPD+ LALCR MA
Sbjct: 204 DVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMA 263

Query: 246 YAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYAKSGSVH 305
             G+ PT  T VISI+ASAD+ LLPQGKELHGYSWRHGF  NDKVKTALVDMYAKSGSV+
Sbjct: 264 LNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALVDMYAKSGSVN 323

Query: 306 VARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEMKEIAVPDHITFVGVLAACSH 365
           VAR LFELL+EK+VVSWNAMI GYAMHGHAN+ALDLF+EMK   +PDHITFVGVLAACSH
Sbjct: 324 VARILFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKAKVLPDHITFVGVLAACSH 383

Query: 366 -----------------------------------------EAYNLIMEMRVEPDAGVWG 425
                                                    EAY LIMEMRVEPDAGVWG
Sbjct: 384 GGLLNEGKMHFRSMISDFNICPTVQHYTCMIDLLGHCGCLEEAYKLIMEMRVEPDAGVWG 443

Query: 426 ALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYAQAGKWEGVARLRDVMMDRG 485
           ALLHSCKIHGNVE GELAL KL+EL PDDGGNYVIL NMYAQAGKW+GVARLRD+MMD+G
Sbjct: 444 ALLHSCKIHGNVEMGELALEKLIELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMDKG 503

Query: 486 LKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPPIGSVFHDVE 545
           LKKSIACSWI+V NKVHAF SED SHP+SEAIYAELKR+GKLMKEAGYAP +GSVFHDVE
Sbjct: 504 LKKSIACSWIQVGNKVHAFLSEDASHPKSEAIYAELKRMGKLMKEAGYAPQVGSVFHDVE 563

Query: 546 DDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNLRVCEDCHVAIKFISKITKREISIR 584
           DDEK DMV  HSERLAIA+GLIST+ G++LLIIKNLR+CEDCHVAIKFISKIT+REI+IR
Sbjct: 564 DDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKITEREITIR 623

BLAST of Carg18805 vs. ExPASy TrEMBL
Match: A0A5A7UW41 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002330 PE=3 SV=1)

HSP 1 Score: 894.0 bits (2309), Expect = 3.2e-256
Identity = 438/556 (78.78%), Postives = 473/556 (85.07%), Query Frame = 0

Query: 66  AIEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIR 125
           AIEPG QLHARIWQ+G+  NPLLATKL+NLYC+CNSL NA LLFDRISKR+ FLWNVMIR
Sbjct: 84  AIEPGKQLHARIWQMGISFNPLLATKLVNLYCICNSLTNARLLFDRISKRNQFLWNVMIR 143

Query: 126 GYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIGAGLET 185
           GYAWNGPYE+AISLYYQM+DYG VPDKFTFPFVLKACSALSAMEEGKKIH+ VI  GLE+
Sbjct: 144 GYAWNGPYEIAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRTGLES 203

Query: 186 DVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLALCRDMA 245
           DVFVGAALIDMYAKCGCV SA+QVFDK+ ERDVVCWNSMLA YSQNGQPD+ LALCR MA
Sbjct: 204 DVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMA 263

Query: 246 YAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYAKSGSVH 305
             G+ PT  T VISI+ASAD+ LLPQGKELHGYSWRHGF  NDKVKTALVDMYAKSGSV+
Sbjct: 264 LNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALVDMYAKSGSVN 323

Query: 306 VARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEMKEIAVPDHITFVGVLAACSH 365
           VAR LFELL+EK+VVSWNAMI GYAMHGHAN+ALDLF+EMK   +PDHITFVGVLAACSH
Sbjct: 324 VARILFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKAKVLPDHITFVGVLAACSH 383

Query: 366 -----------------------------------------EAYNLIMEMRVEPDAGVWG 425
                                                    EAY LIMEMRVEPDAGVWG
Sbjct: 384 GGLLNEGKMHFRSMISDFNICPTVQHYTCMIDLLGHCGCLEEAYKLIMEMRVEPDAGVWG 443

Query: 426 ALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYAQAGKWEGVARLRDVMMDRG 485
           ALLHSCKIHGNVE GELAL KL+EL PDDGGNYVIL NMYAQAGKW+GVARLRD MMD+G
Sbjct: 444 ALLHSCKIHGNVEMGELALEKLIELEPDDGGNYVILSNMYAQAGKWDGVARLRDFMMDKG 503

Query: 486 LKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPPIGSVFHDVE 545
           LKKSIACSWIEV NKVHAF SEDTSHP+SEAIYAELKR+GKLMKEAGYAP +GSVFHDVE
Sbjct: 504 LKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRMGKLMKEAGYAPQVGSVFHDVE 563

Query: 546 DDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNLRVCEDCHVAIKFISKITKREISIR 581
           DDEK DMV  HSERLAIA+GLIST+ G++LLIIKNLR+CEDCHVAIKFISKIT+REI+IR
Sbjct: 564 DDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIKFISKITEREITIR 623

BLAST of Carg18805 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 426.0 bits (1094), Expect = 4.8e-119
Identity = 222/566 (39.22%), Postives = 330/566 (58.30%), Query Frame = 0

Query: 66  AIEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIR 125
           ++    ++H  I   G   +P LATKLI +Y    S+  A  +FD+  KR++++WN + R
Sbjct: 92  SLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFR 151

Query: 126 GYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSA----LSAMEEGKKIHEHVIGA 185
                G  E  + LY++M   G   D+FT+ +VLKAC A    ++ + +GK+IH H+   
Sbjct: 152 ALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRR 211

Query: 186 GLETDVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLALC 245
           G  + V++   L+DMYA+ GCV  A  VF  M  R+VV W++M+A Y++NG+  + L   
Sbjct: 212 GYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTF 271

Query: 246 RDM--AYAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYA 305
           R+M       +P   T+V  + A A    L QGK +HGY  R G      V +ALV MY 
Sbjct: 272 REMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYG 331

Query: 306 KSGSVHVARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEM-KEIAVPDHITFVG 365
           + G + V + +F+ + ++ VVSWN++I+ Y +HG+  +A+ +FEEM    A P  +TFV 
Sbjct: 332 RCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVS 391

Query: 366 VLAACSH-----------------------------------------EAYNLIMEMRVE 425
           VL ACSH                                         EA  ++ +MR E
Sbjct: 392 VLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451

Query: 426 PDAGVWGALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYAQAGKWEGVARLR 485
           P   VWG+LL SC+IHGNVE  E A R+L  L P + GNYV+L ++YA+A  W+ V R++
Sbjct: 452 PGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVK 511

Query: 486 DVMMDRGLKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPPIG 545
            ++  RGL+K     W+EVR K+++F S D  +P  E I+A L ++ + MKE GY P   
Sbjct: 512 KLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTK 571

Query: 546 SVFHDVEDDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNLRVCEDCHVAIKFISKIT 584
            V +++E +EK  +V GHSE+LA+A+GLI+T+ G  + I KNLR+CEDCH+  KFISK  
Sbjct: 572 GVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFM 631

BLAST of Carg18805 vs. TAIR 10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 423.7 bits (1088), Expect = 2.4e-118
Identity = 212/518 (40.93%), Postives = 307/518 (59.27%), Query Frame = 0

Query: 108 LFDRISKRSLFLWNVMIRGYAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSA 167
           +F+ + ++ +  +N +I GYA +G YE A+ +  +M      PD FT   VL   S    
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD 257

Query: 168 MEEGKKIHEHVIGAGLETDVFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAA 227
           + +GK+IH +VI  G+++DV++G++L+DMYAK   +  +++VF ++  RD + WNS++A 
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 317

Query: 228 YSQNGQPDDCLALCRDMAYAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLN 287
           Y QNG+ ++ L L R M  A V P        I A A    L  GK+LHGY  R GF  N
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 377

Query: 288 DKVKTALVDMYAKSGSVHVARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEMKE 347
             + +ALVDMY+K G++  AR +F+ +     VSW A+I G+A+HGH ++A+ LFEEMK 
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437

Query: 348 IAV-PDHITFVGVLAACSH----------------------------------------- 407
             V P+ + FV VL ACSH                                         
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497

Query: 408 EAYNLIMEMRVEPDAGVWGALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYA 467
           EAYN I +M VEP   VW  LL SC +H N+E  E    K+  +  ++ G YV++ NMYA
Sbjct: 498 EAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYA 557

Query: 468 QAGKWEGVARLRDVMMDRGLKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGK 527
             G+W+ +A+LR  M  +GL+K  ACSWIE++NK H F S D SHP  + I   LK + +
Sbjct: 558 SNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVME 617

Query: 528 LMKEAGYAPPIGSVFHDVEDDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNLRVCED 584
            M++ GY      V HDV+++ K +++ GHSERLA+A+G+I+T  G+ + + KN+R+C D
Sbjct: 618 QMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTD 677

BLAST of Carg18805 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 415.6 bits (1067), Expect = 6.5e-116
Identity = 220/559 (39.36%), Postives = 325/559 (58.14%), Query Frame = 0

Query: 67  IEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIRG 126
           I  G ++H    + G      ++T L+++Y  C SL  A  LFD + +R++  WN MI  
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311

Query: 127 YAWNGPYEVAISLYYQMQDYGFVPDKFTFPFVLKACSALSAMEEGKKIHEHVIGAGLETD 186
           Y  N   + A+ ++ +M D G  P   +    L AC+ L  +E G+ IH+  +  GL+ +
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 371

Query: 187 VFVGAALIDMYAKCGCVVSAQQVFDKMVERDVVCWNSMLAAYSQNGQPDDCLALCRDMAY 246
           V V  +LI MY KC  V +A  +F K+  R +V WN+M+  ++QNG+P D L     M  
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431

Query: 247 AGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYAKSGSVHV 306
             V P   T V  I+A A+  +    K +HG   R     N  V TALVDMYAK G++ +
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI 491

Query: 307 ARSLFELLKEKKVVSWNAMIAGYAMHGHANQALDLFEEMKEIAV-PDHITFVGVLAACSH 366
           AR +F+++ E+ V +WNAMI GY  HG    AL+LFEEM++  + P+ +TF+ V++ACSH
Sbjct: 492 ARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSH 551

Query: 367 -----------------------------------------EAYNLIMEMRVEPDAGVWG 426
                                                    EA++ IM+M V+P   V+G
Sbjct: 552 SGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYG 611

Query: 427 ALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYAQAGKWEGVARLRDVMMDRG 486
           A+L +C+IH NV F E A  +L EL PDDGG +V+L N+Y  A  WE V ++R  M+ +G
Sbjct: 612 AMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQG 671

Query: 487 LKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPPIGSVFHDVE 546
           L+K+  CS +E++N+VH+F S  T+HP+S+ IYA L+++   +KEAGY P    V   VE
Sbjct: 672 LRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVE 731

Query: 547 DDEKADMVCGHSERLAIAYGLISTAVGSRLLIIKNLRVCEDCHVAIKFISKITKREISIR 584
           +D K  ++  HSE+LAI++GL++T  G+ + + KNLRVC DCH A K+IS +T REI +R
Sbjct: 732 NDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVR 791

BLAST of Carg18805 vs. TAIR 10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 408.3 bits (1048), Expect = 1.0e-113
Identity = 223/625 (35.68%), Postives = 326/625 (52.16%), Query Frame = 0

Query: 67  IEPGTQLHARIWQIGLGVNPLLATKLINLYCVCNSLINAHLLFDRISKRSLFLWNVMIRG 126
           +E G ++H+ I ++GL  N  ++  L+N+Y  C   + A  +FDR+  R +  WN MI  
Sbjct: 162 METGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIAL 221

Query: 127 YAWNGPYEVAISLYYQMQDYGFV--------------------------------PDKFT 186
           +   G  ++A++ + QM +   V                                PD+FT
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFT 281

Query: 187 FPFVLKACSALSAMEEGKKIHEHVIGAGLETDVFVGAALIDMYAKCGCVVSAQQ------ 246
              VL AC+ L  +  GK+IH H++  G +    V  ALI MY++CG V +A++      
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341

Query: 247 ---------------------------VFDKMVERDVVCWNSMLAAYSQNGQPDDCLALC 306
                                      +F  + +RDVV W +M+  Y Q+G   + + L 
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLF 401

Query: 307 RDMAYAGVNPTVATLVISISASADSVLLPQGKELHGYSWRHGFVLNDKVKTALVDMYAKS 366
           R M   G  P   TL   +S ++    L  GK++HG + + G + +  V  AL+ MYAK+
Sbjct: 402 RSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKA 461

Query: 367 GSVHVARSLFELLK-EKKVVSWNAMIAGYAMHGHANQALDLFEEM-KEIAVPDHITFVGV 426
           G++  A   F+L++ E+  VSW +MI   A HGHA +AL+LFE M  E   PDHIT+VGV
Sbjct: 462 GNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521

Query: 427 LAACSH-----------------------------------------EAYNLIMEMRVEP 486
            +AC+H                                         EA   I +M +EP
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581

Query: 487 DAGVWGALLHSCKIHGNVEFGELALRKLVELGPDDGGNYVILLNMYAQAGKWEGVARLRD 546
           D   WG+LL +C++H N++ G++A  +L+ L P++ G Y  L N+Y+  GKWE  A++R 
Sbjct: 582 DVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641

Query: 547 VMMDRGLKKSIACSWIEVRNKVHAFSSEDTSHPESEAIYAELKRIGKLMKEAGYAPPIGS 584
            M D  +KK    SWIEV++KVH F  ED +HPE   IY  +K+I   +K+ GY P   S
Sbjct: 642 SMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTAS 701

BLAST of Carg18805 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 405.6 bits (1041), Expect = 6.7e-113
Identity = 209/535 (39.07%), Postives = 311/535 (58.13%), Query Frame = 0

Query: 92  LINLYCVCNSLINAHLLFDRISKRSLFLWNVMIRGYAWNGPYEVAISLYYQMQDYGFVPD 151
           L+++Y  C  L +A  +F  +S RS+  +  MI GYA  G    A+ L+ +M++ G  PD
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396

Query: 152 KFTFPFVLKACSALSAMEEGKKIHEHVIGAGLETDVFVGAALIDMYAKCGCVVSAQQVFD 211
            +T   VL  C+    ++EGK++HE +    L  D+FV  AL+DMYAKCG +  A+ VF 
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 456

Query: 212 KMVERDVVCWNSMLAAYSQNGQPDDCLALCR-DMAYAGVNPTVATLVISISASADSVLLP 271
           +M  +D++ WN+++  YS+N   ++ L+L    +     +P   T+   + A A      
Sbjct: 457 EMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 516

Query: 272 QGKELHGYSWRHGFVLNDKVKTALVDMYAKSGSVHVARSLFELLKEKKVVSWNAMIAGYA 331
           +G+E+HGY  R+G+  +  V  +LVDMYAK G++ +A  LF+ +  K +VSW  MIAGY 
Sbjct: 517 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG 576

Query: 332 MHGHANQALDLFEEMKEIAV-PDHITFVGVLAACSH------------------------ 391
           MHG   +A+ LF +M++  +  D I+FV +L ACSH                        
Sbjct: 577 MHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 636

Query: 392 -----------------EAYNLIMEMRVEPDAGVWGALLHSCKIHGNVEFGELALRKLVE 451
                            +AY  I  M + PDA +WGALL  C+IH +V+  E    K+ E
Sbjct: 637 EHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE 696

Query: 452 LGPDDGGNYVILLNMYAQAGKWEGVARLRDVMMDRGLKKSIACSWIEVRNKVHAFSSEDT 511
           L P++ G YV++ N+YA+A KWE V RLR  +  RGL+K+  CSWIE++ +V+ F + D+
Sbjct: 697 LEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDS 756

Query: 512 SHPESEAIYAELKRIGKLMKEAGYAPPIGSVFHDVEDDEKADMVCGHSERLAIAYGLIST 571
           S+PE+E I A L+++   M E GY+P       D E+ EK + +CGHSE+LA+A G+IS+
Sbjct: 757 SNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISS 816

Query: 572 AVGSRLLIIKNLRVCEDCHVAIKFISKITKREISIRDVNRYHHFKDGLCSCGDFW 584
             G  + + KNLRVC DCH   KF+SK+T+REI +RD NR+H FKDG CSC  FW
Sbjct: 817 GHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7025792.10.0e+00100.00Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_022964400.12.3e-28888.73pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata][more]
XP_038898350.11.6e-26280.32pentatricopeptide repeat-containing protein At4g21065-like [Benincasa hispida] >... [more]
XP_022150877.12.9e-25979.61pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Momor... [more]
XP_031744701.15.0e-25979.07pentatricopeptide repeat-containing protein At4g21065 [Cucumis sativus] >XP_0317... [more]
Match NameE-valueIdentityDescription
Q9STF36.8e-11839.22Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... [more]
Q9LW633.4e-11740.93Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... [more]
Q3E6Q19.2e-11539.36Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
Q9SHZ81.5e-11235.68Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... [more]
Q9SN399.5e-11239.07Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
Match NameE-valueIdentityDescription
A0A6J1HKP71.1e-28888.73pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita moschata... [more]
A0A6J1DBD31.4e-25979.61pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Mom... [more]
A0A0A0KAF02.4e-25979.07DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G4468... [more]
A0A1S3CG773.5e-25878.53pentatricopeptide repeat-containing protein At4g21065-like OS=Cucumis melo OX=36... [more]
A0A5A7UW413.2e-25678.78Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
AT3G46790.14.8e-11939.22Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G23330.12.4e-11840.93Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G11290.16.5e-11639.36Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G22070.11.0e-11335.68pentatricopeptide (PPR) repeat-containing protein [more]
AT4G18750.16.7e-11339.07Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 417..445
e-value: 0.1
score: 12.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 216..262
e-value: 2.9E-7
score: 30.6
coord: 318..363
e-value: 9.6E-11
score: 41.7
coord: 118..162
e-value: 7.3E-9
score: 35.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 119..151
e-value: 1.6E-6
score: 25.9
coord: 320..347
e-value: 4.1E-6
score: 24.6
coord: 219..251
e-value: 1.0E-4
score: 20.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 217..251
score: 11.312119
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 413..447
score: 8.933517
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 116..150
score: 11.005202
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 318..352
score: 10.588674
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 277..367
e-value: 1.5E-18
score: 68.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 39..162
e-value: 1.1E-12
score: 50.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 163..276
e-value: 5.3E-22
score: 80.7
coord: 368..502
e-value: 9.9E-8
score: 33.8
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 451..573
e-value: 1.1E-39
score: 135.2
NoneNo IPR availablePANTHERPTHR47924:SF27SUBFAMILY NOT NAMEDcoord: 366..577
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 65..365
coord: 366..577
NoneNo IPR availablePANTHERPTHR47924:SF27SUBFAMILY NOT NAMEDcoord: 65..365

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18805-RACarg18805-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding