Carg18804 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18804
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	thioredoxin domain-containing protein 9 homolog
Location	Carg_Chr08: 3822313 .. 3824473 (+)
RNA-Seq Expression	Carg18804
Synteny	Carg18804

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGTTAGCTAGCTCTATGTGTGAAGACTGTGATTTTATTCTTGGTTGAGTGAATTCAGTTTTGTAAATGTAGTATGATCAACACACCATATTGCTTCCGAATCTGATATTTGAACCGTATTGGTTTTGTGACAGGTTGATTTTGCTTCAAAACTTTCGAGACGGTTTTTCTGCAACATCTTTACAGTTTGAACATTTTGCGAGGGGGATCGGCTTCTAACTTGTAGAAAATGGAAAATTCAAAAATTCAAGAGGCATTTTCTCGGCATCTCTACACGTAATACACAATTTCTGTTGCCATTTGTATATTGTTAATTTTTCGTTTTTTTTTTTTTGTGCCAGATATTGGAGAAGCAGGTGCTGACGGTGGCGAAGGCCGTGGAGGACAAGATTGATGACGATATTGCAGCGCTAGATCGTCTGGACCTTGACGATTTGGAGGCTTTGAGGGAGCGAAGATTGCAGCAGATGAAGAGGATGGCAGAGAAGCGTAGTCGATGGATCTCCCTTGGCCATGGCGAATACTCTGAGATTCCCGTCGAGAAGGACTTCTTCTCCGTAGTCAAGGCTAGTGATCGCGTGGTCTGCCACTTTTACCGTGAAAATTGGCCCTGGCAAGGTTAGGTTCTGTTAGTCACTTATCGATTGATTTAGTGTGTTAATTGGATATTCTTTTTACATCTTAACTGTAAAAGCCGATGAATTTTCTAGCTTTTGGGAAATTGAACTTCATTCCAAGCATGTAGGACTGTTTTGCATTCTTTTCGTTTATGCTATGTCTACCAGTTAGTGCAATGATCAAATATCCAGGAATATAAGAAATGGATTTATTTATGTAATGAGACTCAAATTTTAATACCTCTGGTTTTTTGCAGCCCTTATTTAATTTGTGTTGTAATTATTAAAAAGGTTGAAGTCAATTGAAATAGGTGAATGATGACCAAACAATTAGCTCTTTCAAATGAACATGCTCTGGTTGAAAAGAGGTTCTAGCTCTTGTTAGTATCGTGTCTCTTGTAGTCTTTGTTCATGTGCATTTTCTCAATCATGAGTTTTTTTTCAACATACAAGCATTTTTTATCCTTCTCATGTGATCAATTCAGCCCATAGCTCTCAACTTAGTTGGAAATGATCCATGTTTAACCCCGAGGGTGTTGCCAGAGGACTGATACTGTATTATCTTTTATTATTCCTTGACATTTTTTTGCGTACATAATTATGCACTATGAACTTCAAGGAAGATTCTTTGATGGTTACAAATTTTGAGTGGATGATAATCTAAAGTTATGATGTTTATTTAATGTATTAAGACTTTTATTTACTTTAAGGTTACATCTACATATTGGCTAATTATGGTCAGTCTCATGGAAGGTCAAAGATTTTCATTTTGAGGCTATATAAAGCCATGTCTGTTATATTTGTAAAGTAGACTTGAAAAATGTAGTAAAAAGAGCATTTTTGTTTTCCTTGGGTCAATTGGCTAAGTTTATTTGCAATTCTATGTAGTTTAGATTGCATGTTTAGAATTCAAGCTTGACATGATTGAACTTGCTTGTGGAGTGGTTCGAATTTCAAACAAGTGTTATTGCCTTGAGATATTCAATTAACATGGTAATTCGAATCTTACTTCCCTGGTAGTGATTCATTATCATTTGGCATAAGAGCTTTCCCTTGGGTTGACTCCTCATTGCAGAATTATGGGTATCTAAGTTGGACCATTGGACGTTATTGTCCATAATTTAAGGCTGTTTACTTAGTTTTTAATTGTACTTATCACTTGTAAGCCTGGGCATTTGAGAGAAATGATGCATGTTCATTTTGCAGGTTATGGACAAGCACTTGAATATCTTGGCAAAGCAACATATTGAGACTCGTTTCGTAAAGATCAATGCCGAGAAAAGTCCATTTCTGACTGAGAAGTTGAAGATCATTGTTCTTCCAACCCTTGCTCTTGTCAAAAATGCAAAAGTAGAAGACTATGTGGTATGTCTTTATGGTAACACACCACTGATTACTGAATTATGTTTTGTGTCCTTTAACTCAACTCACGTGAATCTATCAGGTGGGATTTGATGAGCTTGGTGGAACTGACGAATTCAGCACAGAGGAATTGGAGGAGAGGTTGGCGAAATGTCAGGTCATCTTCTATGAAAGGTGA

mRNA sequence

ATGCAGATATTGGAGAAGCAGGTGCTGACGGTGGCGAAGGCCGTGGAGGACAAGATTGATGACGATATTGCAGCGCTAGATCGTCTGGACCTTGACGATTTGGAGGCTTTGAGGGAGCGAAGATTGCAGCAGATGAAGAGGATGGCAGAGAAGCGTAGTCGATGGATCTCCCTTGGCCATGGCGAATACTCTGAGATTCCCGTCGAGAAGGACTTCTTCTCCGTAGTCAAGGCTAGTGATCGCGTGGTTATGGACAAGCACTTGAATATCTTGGCAAAGCAACATATTGAGACTCGTTTCGTAAAGATCAATGCCGAGAAAAGTCCATTTCTGACTGAGAAGTTGAAGATCATTGTTCTTCCAACCCTTGCTCTTGTCAAAAATGCAAAAGTAGAAGACTATGTGGTGGGATTTGATGAGCTTGGTGGAACTGACGAATTCAGCACAGAGGAATTGGAGGAGAGGTTGGCGAAATGTCAGGTCATCTTCTATGAAAGGTGA

Coding sequence (CDS)

ATGCAGATATTGGAGAAGCAGGTGCTGACGGTGGCGAAGGCCGTGGAGGACAAGATTGATGACGATATTGCAGCGCTAGATCGTCTGGACCTTGACGATTTGGAGGCTTTGAGGGAGCGAAGATTGCAGCAGATGAAGAGGATGGCAGAGAAGCGTAGTCGATGGATCTCCCTTGGCCATGGCGAATACTCTGAGATTCCCGTCGAGAAGGACTTCTTCTCCGTAGTCAAGGCTAGTGATCGCGTGGTTATGGACAAGCACTTGAATATCTTGGCAAAGCAACATATTGAGACTCGTTTCGTAAAGATCAATGCCGAGAAAAGTCCATTTCTGACTGAGAAGTTGAAGATCATTGTTCTTCCAACCCTTGCTCTTGTCAAAAATGCAAAAGTAGAAGACTATGTGGTGGGATTTGATGAGCTTGGTGGAACTGACGAATTCAGCACAGAGGAATTGGAGGAGAGGTTGGCGAAATGTCAGGTCATCTTCTATGAAAGGTGA

Protein sequence

MQILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHGEYSEIPVEKDFFSVVKASDRVVMDKHLNILAKQHIETRFVKINAEKSPFLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYER

Homology

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BLAST of Carg18804 vs. NCBI nr
Match: KAG7025793.1 (Thioredoxin domain-containing protein 9-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 316.2 bits (809), Expect = 1.6e-82
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MQILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGH 60
           MQILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGH
Sbjct: 1   MQILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGH 60

Query: 61  GEYSEIPVEKDFFSVVKASDRVVMDKHLNILAKQHIETRFVKINAEKSPFLTEKLKIIVL 120
           GEYSEIPVEKDFFSVVKASDRVVMDKHLNILAKQHIETRFVKINAEKSPFLTEKLKIIVL
Sbjct: 61  GEYSEIPVEKDFFSVVKASDRVVMDKHLNILAKQHIETRFVKINAEKSPFLTEKLKIIVL 120

Query: 121 PTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYER 167
           PTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYER
Sbjct: 121 PTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYER 166

[Close]

BLAST of Carg18804 vs. NCBI nr
Match: KAG6593453.1 (Thioredoxin domain-containing protein 9-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 302.4 bits (773), Expect = 2.5e-78
Identity = 163/176 (92.61%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 2   QILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 61
           +ILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG
Sbjct: 8   EILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 67

Query: 62  EYSEIPVEKDFFSVVKASDRV------------VMDKHLNILAKQHIETRFVKINAEKSP 121
           EYSEIPVEKDFFSVVKASDRV            VMDKHLNILAKQHIETRFVKINAEKSP
Sbjct: 68  EYSEIPVEKDFFSVVKASDRVVCHFYRENWPCKVMDKHLNILAKQHIETRFVKINAEKSP 127

Query: 122 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 166
           FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE
Sbjct: 128 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 183

[Close]

BLAST of Carg18804 vs. NCBI nr
Match: XP_022964224.1 (thioredoxin domain-containing protein 9 homolog [Cucurbita moschata])

HSP 1 Score: 302.4 bits (773), Expect = 2.5e-78
Identity = 163/176 (92.61%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 2   QILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 61
           +ILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG
Sbjct: 8   EILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 67

Query: 62  EYSEIPVEKDFFSVVKASDRV------------VMDKHLNILAKQHIETRFVKINAEKSP 121
           EYSEIPVEKDFFSVVKASDRV            VMDKHLNILAKQHIETRFVKINAEKSP
Sbjct: 68  EYSEIPVEKDFFSVVKASDRVVCHFYRENWPCKVMDKHLNILAKQHIETRFVKINAEKSP 127

Query: 122 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 166
           FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE
Sbjct: 128 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 183

[Close]

BLAST of Carg18804 vs. NCBI nr
Match: XP_023000391.1 (thioredoxin domain-containing protein 9 homolog [Cucurbita maxima])

HSP 1 Score: 300.8 bits (769), Expect = 7.1e-78
Identity = 162/176 (92.05%), Postives = 163/176 (92.61%), Query Frame = 0


Query: 2   QILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 61
           +ILEKQVLTV KAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG
Sbjct: 8   EILEKQVLTVVKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 67

Query: 62  EYSEIPVEKDFFSVVKASDRV------------VMDKHLNILAKQHIETRFVKINAEKSP 121
           EYSEIPVEKDFFSVVKASDRV            VMDKHLNILAKQHIETRFVKINAEKSP
Sbjct: 68  EYSEIPVEKDFFSVVKASDRVVCHFYRENWPCKVMDKHLNILAKQHIETRFVKINAEKSP 127

Query: 122 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 166
           FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE
Sbjct: 128 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 183

[Close]

BLAST of Carg18804 vs. NCBI nr
Match: XP_023514797.1 (thioredoxin domain-containing protein 9 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297.0 bits (759), Expect = 1.0e-76
Identity = 161/176 (91.48%), Postives = 163/176 (92.61%), Query Frame = 0


Query: 2   QILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 61
           +ILEKQVL+VAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG
Sbjct: 8   EILEKQVLSVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 67

Query: 62  EYSEIPVEKDFFSVVKASDRV------------VMDKHLNILAKQHIETRFVKINAEKSP 121
           EYSEIPVEKDFFSVVKASDRV            VMDKHLNILAKQHIETRFVKINAEKSP
Sbjct: 68  EYSEIPVEKDFFSVVKASDRVVCHFYRENWPCKVMDKHLNILAKQHIETRFVKINAEKSP 127

Query: 122 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 166
           FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAK QVIFYE
Sbjct: 128 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKSQVIFYE 183

[Close]

BLAST of Carg18804 vs. ExPASy Swiss-Prot
Match: O64628 (Thioredoxin domain-containing protein 9 homolog OS=Arabidopsis thaliana OX=3702 GN=At2g18990 PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 6.5e-66
Identity = 131/176 (74.43%), Postives = 153/176 (86.93%), Query Frame = 0


Query: 2   QILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 61
           +ILEKQVLTVAKA+EDKIDD+IA+L++LD DDLE LRERRL+QMK+MAEK+ RWISLGHG
Sbjct: 7   EILEKQVLTVAKAMEDKIDDEIASLEKLDEDDLEVLRERRLKQMKKMAEKKKRWISLGHG 66

Query: 62  EYSEIPVEKDFFSVVKASDRV------------VMDKHLNILAKQHIETRFVKINAEKSP 121
           EYSEI  EKDFFSVVKAS+RV            VMDKH++ILAKQHIETRFVKI AEKSP
Sbjct: 67  EYSEIHSEKDFFSVVKASERVVCHFYRENWPCKVMDKHMSILAKQHIETRFVKIQAEKSP 126

Query: 122 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 166
           FL E+LKI+VLPTLAL+KN KV+DYVVGF+ELGG D+FSTE+LEER+A+ QVI Y+
Sbjct: 127 FLAERLKIVVLPTLALIKNTKVDDYVVGFNELGGKDDFSTEDLEERIARAQVIHYD 182

[Close]

BLAST of Carg18804 vs. ExPASy Swiss-Prot
Match: O14530 (Thioredoxin domain-containing protein 9 OS=Homo sapiens OX=9606 GN=TXNDC9 PE=1 SV=2)

HSP 1 Score: 171.8 bits (434), Expect = 6.6e-42
Identity = 85/176 (48.30%), Postives = 124/176 (70.45%), Query Frame = 0


Query: 2   QILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 61
           ++LE Q+L   K VE+ +D +I  LD++D D+LE L+E+RLQ +++  +++  W+S GHG
Sbjct: 12  KVLEHQLLQTTKLVEEHLDSEIQKLDQMDEDELERLKEKRLQALRKAQQQKQEWLSKGHG 71

Query: 62  EYSEIPVEKDFFSVVKASDRVV-------------MDKHLNILAKQHIETRFVKINAEKS 121
           EY EIP E+DFF  VK S+ VV             +D+HL IL+K+H+ET+F+K+N EK+
Sbjct: 72  EYREIPSERDFFQEVKESENVVCHFYRDSTFRCKILDRHLAILSKKHLETKFLKLNVEKA 131

Query: 122 PFLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFY 165
           PFL E+L I V+PTLAL+K+ K +DYVVGF +LG TD+F+TE LE RL    ++ Y
Sbjct: 132 PFLCERLHIKVIPTLALLKDGKTQDYVVGFTDLGNTDDFTTETLEWRLGSSDILNY 187

[Close]

BLAST of Carg18804 vs. ExPASy Swiss-Prot
Match: O18883 (Thioredoxin domain-containing protein 9 OS=Bos taurus OX=9913 GN=TXNDC9 PE=2 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 5.6e-41
Identity = 84/176 (47.73%), Postives = 124/176 (70.45%), Query Frame = 0


Query: 2   QILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 61
           ++LE Q+L   K VE+ +D +I  LD++D D+LE L+E+RL+ +K+  +++  W+S GHG
Sbjct: 12  KVLENQLLQTTKLVEEHLDSEIQKLDQMDEDELERLKEKRLEALKKAQQQKQEWLSKGHG 71

Query: 62  EYSEIPVEKDFFSVVKASDRVV-------------MDKHLNILAKQHIETRFVKINAEKS 121
           EY EIP E+DFF   K S +VV             +D+HL IL+K+H+ET+F+K+N EK+
Sbjct: 72  EYREIPSERDFFQEDKESKKVVCHFYRDSTFRCKILDRHLVILSKKHLETKFLKLNVEKA 131

Query: 122 PFLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFY 165
           PFL E+L+I V+PTLALVK+ K +D+VVGF +LG TD+F+TE LE RL    ++ Y
Sbjct: 132 PFLCERLRIKVIPTLALVKDGKTQDFVVGFSDLGNTDDFTTETLEWRLGCSDILNY 187

[Close]

BLAST of Carg18804 vs. ExPASy Swiss-Prot
Match: Q9CQ79 (Thioredoxin domain-containing protein 9 OS=Mus musculus OX=10090 GN=Txndc9 PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.8e-40
Identity = 85/176 (48.30%), Postives = 123/176 (69.89%), Query Frame = 0


Query: 2   QILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 61
           ++LE Q L  AK VE+ +D +I  LD++  D+LE L+E+RL  +++  +++  W+S GHG
Sbjct: 12  EVLENQFLQAAKLVENHLDSEIQKLDQIGEDELELLKEKRLAALRKAQQQKQEWLSKGHG 71

Query: 62  EYSEIPVEKDFFSVVKASDRVV-------------MDKHLNILAKQHIETRFVKINAEKS 121
           EY EI  E+DFF  VK S++VV             +D+HL ILAK+H+ET+F+K+N EK+
Sbjct: 72  EYREIGSERDFFQEVKESEKVVCHFYRDTTFRCKILDRHLAILAKKHLETKFLKLNVEKA 131

Query: 122 PFLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFY 165
           PFL E+L+I V+PTLAL+++ K +DYVVGF +LG TD+F+TE LE RL    VI Y
Sbjct: 132 PFLCERLRIKVIPTLALLRDGKTQDYVVGFTDLGNTDDFTTETLEWRLGCSDVINY 187

[Close]

BLAST of Carg18804 vs. ExPASy Swiss-Prot
Match: Q8K581 (Thioredoxin domain-containing protein 9 OS=Rattus norvegicus OX=10116 GN=Txndc9 PE=2 SV=2)

HSP 1 Score: 164.1 bits (414), Expect = 1.4e-39
Identity = 84/176 (47.73%), Postives = 122/176 (69.32%), Query Frame = 0


Query: 2   QILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 61
           ++LE Q L  AK VE+ +D +I  LD++  D+LE L+E+RL  +++  +++  W+S GHG
Sbjct: 12  EVLENQFLQAAKLVENHLDSEIQKLDQIGEDELELLKEKRLAALRKAQQQKQEWLSKGHG 71

Query: 62  EYSEIPVEKDFFSVVKASDRVV-------------MDKHLNILAKQHIETRFVKINAEKS 121
           EY EI  E+DFF  VK S++VV             +D+HL ILAK+H+ET+F+K N EK+
Sbjct: 72  EYREIGSERDFFQEVKESEKVVCHFYRDTTFRCKILDRHLAILAKKHLETKFLKPNVEKA 131

Query: 122 PFLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFY 165
           PFL E+L+I V+PTLAL+++ K +DY+VGF +LG TD+F+TE LE RL    VI Y
Sbjct: 132 PFLCERLRIKVIPTLALLRDGKTQDYIVGFTDLGNTDDFTTETLEWRLGCSDVINY 187

[Close]

BLAST of Carg18804 vs. ExPASy TrEMBL
Match: A0A6J1HMI7 (thioredoxin domain-containing protein 9 homolog OS=Cucurbita moschata OX=3662 GN=LOC111464309 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78
Identity = 163/176 (92.61%), Postives = 164/176 (93.18%), Query Frame = 0


Query: 2   QILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 61
           +ILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG
Sbjct: 8   EILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 67

Query: 62  EYSEIPVEKDFFSVVKASDRV------------VMDKHLNILAKQHIETRFVKINAEKSP 121
           EYSEIPVEKDFFSVVKASDRV            VMDKHLNILAKQHIETRFVKINAEKSP
Sbjct: 68  EYSEIPVEKDFFSVVKASDRVVCHFYRENWPCKVMDKHLNILAKQHIETRFVKINAEKSP 127

Query: 122 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 166
           FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE
Sbjct: 128 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 183

[Close]

BLAST of Carg18804 vs. ExPASy TrEMBL
Match: A0A6J1KFR6 (thioredoxin domain-containing protein 9 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494648 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.5e-78
Identity = 162/176 (92.05%), Postives = 163/176 (92.61%), Query Frame = 0


Query: 2   QILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 61
           +ILEKQVLTV KAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG
Sbjct: 8   EILEKQVLTVVKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 67

Query: 62  EYSEIPVEKDFFSVVKASDRV------------VMDKHLNILAKQHIETRFVKINAEKSP 121
           EYSEIPVEKDFFSVVKASDRV            VMDKHLNILAKQHIETRFVKINAEKSP
Sbjct: 68  EYSEIPVEKDFFSVVKASDRVVCHFYRENWPCKVMDKHLNILAKQHIETRFVKINAEKSP 127

Query: 122 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 166
           FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE
Sbjct: 128 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 183

[Close]

BLAST of Carg18804 vs. ExPASy TrEMBL
Match: A0A6J1JDW9 (thioredoxin domain-containing protein 9 homolog OS=Cucurbita maxima OX=3661 GN=LOC111484134 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.2e-75
Identity = 154/176 (87.50%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 2   QILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 61
           +ILEKQVLTVAKAVEDKIDD+IAA+DRLDLDDLEALRERRLQQMK+MAEKRSRWISLGHG
Sbjct: 8   EILEKQVLTVAKAVEDKIDDEIAAIDRLDLDDLEALRERRLQQMKKMAEKRSRWISLGHG 67

Query: 62  EYSEIPVEKDFFSVVKASDRV------------VMDKHLNILAKQHIETRFVKINAEKSP 121
           EYSEIPVEKDFFS+VKASDRV            VMDKHL ILAKQHIETRFVKINAEKSP
Sbjct: 68  EYSEIPVEKDFFSIVKASDRVVCHFYRDNWPCKVMDKHLGILAKQHIETRFVKINAEKSP 127

Query: 122 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 166
           FL EKLKI+VLPTLAL+KNAKV+DYVVGFDELGGTDEFSTEELEERLAKCQVIFYE
Sbjct: 128 FLAEKLKIVVLPTLALIKNAKVDDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 183

[Close]

BLAST of Carg18804 vs. ExPASy TrEMBL
Match: A0A6J1FUY2 (thioredoxin domain-containing protein 9 homolog OS=Cucurbita moschata OX=3662 GN=LOC111449040 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.2e-75
Identity = 154/176 (87.50%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 2   QILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 61
           +ILEKQVLTVAKAVEDKIDD+IAA+DRLDLDDLEALRERRLQQMK+MAEKRSRWISLGHG
Sbjct: 8   EILEKQVLTVAKAVEDKIDDEIAAIDRLDLDDLEALRERRLQQMKKMAEKRSRWISLGHG 67

Query: 62  EYSEIPVEKDFFSVVKASDRV------------VMDKHLNILAKQHIETRFVKINAEKSP 121
           EYSEIPVEKDFFS+VKASDRV            VMDKHL ILAKQHIETRFVKINAEKSP
Sbjct: 68  EYSEIPVEKDFFSIVKASDRVVCHFYRDNWPCKVMDKHLGILAKQHIETRFVKINAEKSP 127

Query: 122 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 166
           FL EKLKI+VLPTLAL+KNAKV+DYVVGFDELGGTDEFSTEELEERLAKCQVIFYE
Sbjct: 128 FLAEKLKIVVLPTLALIKNAKVDDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 183

[Close]

BLAST of Carg18804 vs. ExPASy TrEMBL
Match: A0A6J1CW34 (thioredoxin domain-containing protein 9 homolog OS=Momordica charantia OX=3673 GN=LOC111015098 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 6.1e-75
Identity = 152/176 (86.36%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 2   QILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 61
           +ILEKQVLTVAKAVEDKIDD+IAALDRLDLDD EALRERRLQQMK+MAEKRSRWISLGHG
Sbjct: 8   EILEKQVLTVAKAVEDKIDDEIAALDRLDLDDFEALRERRLQQMKKMAEKRSRWISLGHG 67

Query: 62  EYSEIPVEKDFFSVVKASDRV------------VMDKHLNILAKQHIETRFVKINAEKSP 121
           EYSEIPVEKDFFS+VKASDRV            VMDKH++ILAKQHIETRFVKINAEKSP
Sbjct: 68  EYSEIPVEKDFFSIVKASDRVVCHFYRENWPCKVMDKHMSILAKQHIETRFVKINAEKSP 127

Query: 122 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 166
           FL E+LKI+VLPTLAL+KNAKV+DYVVGFDELGGTDEFSTEELEERLAKCQVIFYE
Sbjct: 128 FLAERLKIVVLPTLALIKNAKVDDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 183

[Close]

BLAST of Carg18804 vs. TAIR 10
Match: AT2G18990.1 (thioredoxin domain-containing protein 9 homolog )

HSP 1 Score: 251.5 bits (641), Expect = 4.6e-67
Identity = 131/176 (74.43%), Postives = 153/176 (86.93%), Query Frame = 0


Query: 2   QILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 61
           +ILEKQVLTVAKA+EDKIDD+IA+L++LD DDLE LRERRL+QMK+MAEK+ RWISLGHG
Sbjct: 7   EILEKQVLTVAKAMEDKIDDEIASLEKLDEDDLEVLRERRLKQMKKMAEKKKRWISLGHG 66

Query: 62  EYSEIPVEKDFFSVVKASDRV------------VMDKHLNILAKQHIETRFVKINAEKSP 121
           EYSEI  EKDFFSVVKAS+RV            VMDKH++ILAKQHIETRFVKI AEKSP
Sbjct: 67  EYSEIHSEKDFFSVVKASERVVCHFYRENWPCKVMDKHMSILAKQHIETRFVKIQAEKSP 126

Query: 122 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 166
           FL E+LKI+VLPTLAL+KN KV+DYVVGF+ELGG D+FSTE+LEER+A+ QVI Y+
Sbjct: 127 FLAERLKIVVLPTLALIKNTKVDDYVVGFNELGGKDDFSTEDLEERIARAQVIHYD 182

[Close]

BLAST of Carg18804 vs. TAIR 10
Match: AT3G25580.1 (Thioredoxin superfamily protein )

HSP 1 Score: 248.8 bits (634), Expect = 3.0e-66
Identity = 128/176 (72.73%), Postives = 153/176 (86.93%), Query Frame = 0


Query: 2   QILEKQVLTVAKAVEDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHG 61
           +I+EKQVLTVAKA+EDKIDD+IA+L++LD DDLE LRERRL+QMK+MAEK+ RW+S+GHG
Sbjct: 7   EIIEKQVLTVAKAMEDKIDDEIASLEKLDEDDLEVLRERRLKQMKKMAEKKKRWMSIGHG 66

Query: 62  EYSEIPVEKDFFSVVKASDRV------------VMDKHLNILAKQHIETRFVKINAEKSP 121
           EYSEI  EKDFFSVVK+S+RV            VMDKH++ILAKQHIETRFVKI AEKSP
Sbjct: 67  EYSEIHSEKDFFSVVKSSERVVCHFYRENWPCKVMDKHMSILAKQHIETRFVKIQAEKSP 126

Query: 122 FLTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAKCQVIFYE 166
           FL E+LKI+VLPTLAL+KN KV+DYVVGF+ELGG D+FSTE+LEER+A+ QVI YE
Sbjct: 127 FLAERLKIVVLPTLALIKNTKVDDYVVGFNELGGKDDFSTEDLEERIARAQVIHYE 182

[Close]

BLAST of Carg18804 vs. TAIR 10
Match: AT3G50960.1 (phosducin-like protein 3 homolog )

HSP 1 Score: 99.0 bits (245), Expect = 3.8e-21
Identity = 61/168 (36.31%), Postives = 93/168 (55.36%), Query Frame = 0


Query: 5   EKQVLTVAKAV-EDKIDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHGEY 64
           +K+VL   KA   + +++++   + +D  +LE L   R+  +KR  EKR  +   GHGEY
Sbjct: 27  QKEVLANEKAQGSNPVNEEVDLDELMDDPELERLHADRIAALKREVEKRESFKRQGHGEY 86

Query: 65  SEIPVEKDFFSVVKASDRV-------------VMDKHLNILAKQHIETRFVKINAEKSPF 124
            E+  E DF   V  S++V             +MDKHL  LA +H++T+F+K++AE +PF
Sbjct: 87  REVS-EGDFLGEVTRSEKVICHFYHKEFYRCKIMDKHLKTLAPRHVDTKFIKVDAENAPF 146

Query: 125 LTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAK 159
              KL I  LP + L       D +VGF +LG  D+F+T +LE  L K
Sbjct: 147 FVTKLAIKTLPCVVLFSKGVAMDRLVGFQDLGTKDDFTTNKLENVLLK 193

[Close]

BLAST of Carg18804 vs. TAIR 10
Match: AT5G66410.1 (phosducin-like protein 3 homolog )

HSP 1 Score: 98.2 bits (243), Expect = 6.6e-21
Identity = 61/168 (36.31%), Postives = 93/168 (55.36%), Query Frame = 0


Query: 5   EKQVLTVAKAVEDK-IDDDIAALDRLDLDDLEALRERRLQQMKRMAEKRSRWISLGHGEY 64
           +K+VL   KA   + +++++   + +D  +LE L   R+  ++R  EKR  +   GHGEY
Sbjct: 27  KKEVLANEKAQGSRPVNEEVDLDELMDDPELEKLHADRIAALRREVEKREAFKRQGHGEY 86

Query: 65  SEIPVEKDFFSVVKASDRV-------------VMDKHLNILAKQHIETRFVKINAEKSPF 124
            E+  E DF   V  S++V             +MDKHL  LA +H++T+F+K++AE +PF
Sbjct: 87  REVS-EGDFLGEVTRSEKVICHFYHKEFYRCKIMDKHLKTLAPRHVDTKFIKMDAENAPF 146

Query: 125 LTEKLKIIVLPTLALVKNAKVEDYVVGFDELGGTDEFSTEELEERLAK 159
              KL I  LP + L       D +VGF +LG  D+FST +LE  L K
Sbjct: 147 FVTKLAIKTLPCVILFSKGIAMDRLVGFQDLGAKDDFSTTKLENLLVK 193

The following BLAST results are available for this feature:

BLAST of Carg18804 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025793.1	1.6e-82	100.00	Thioredoxin domain-containing protein 9-like protein, partial [Cucurbita argyros...	[more]
KAG6593453.1	2.5e-78	92.61	Thioredoxin domain-containing protein 9-like protein, partial [Cucurbita argyros...	[more]
XP_022964224.1	2.5e-78	92.61	thioredoxin domain-containing protein 9 homolog [Cucurbita moschata]	[more]
XP_023000391.1	7.1e-78	92.05	thioredoxin domain-containing protein 9 homolog [Cucurbita maxima]	[more]
XP_023514797.1	1.0e-76	91.48	thioredoxin domain-containing protein 9 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg18804 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64628	6.5e-66	74.43	Thioredoxin domain-containing protein 9 homolog OS=Arabidopsis thaliana OX=3702 ...	[more]
O14530	6.6e-42	48.30	Thioredoxin domain-containing protein 9 OS=Homo sapiens OX=9606 GN=TXNDC9 PE=1 S...	[more]
O18883	5.6e-41	47.73	Thioredoxin domain-containing protein 9 OS=Bos taurus OX=9913 GN=TXNDC9 PE=2 SV=...	[more]
Q9CQ79	2.8e-40	48.30	Thioredoxin domain-containing protein 9 OS=Mus musculus OX=10090 GN=Txndc9 PE=1 ...	[more]
Q8K581	1.4e-39	47.73	Thioredoxin domain-containing protein 9 OS=Rattus norvegicus OX=10116 GN=Txndc9 ...	[more]

BLAST of Carg18804 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HMI7	1.2e-78	92.61	thioredoxin domain-containing protein 9 homolog OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KFR6	3.5e-78	92.05	thioredoxin domain-containing protein 9 homolog OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JDW9	1.2e-75	87.50	thioredoxin domain-containing protein 9 homolog OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FUY2	1.2e-75	87.50	thioredoxin domain-containing protein 9 homolog OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1CW34	6.1e-75	86.36	thioredoxin domain-containing protein 9 homolog OS=Momordica charantia OX=3673 G...	[more]

BLAST of Carg18804 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18990.1	4.6e-67	74.43	thioredoxin domain-containing protein 9 homolog	[more]
AT3G25580.1	3.0e-66	72.73	Thioredoxin superfamily protein	[more]
AT3G50960.1	3.8e-21	36.31	phosducin-like protein 3 homolog	[more]
AT5G66410.1	6.6e-21	36.31	phosducin-like protein 3 homolog	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 31..54
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 59..165 e-value: 1.3E-19 score: 72.5
None	No IPR available	PANTHER	PTHR21148:SF11	THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9	coord: 2..165
None	No IPR available	CDD	cd02989	Phd_like_TxnDC9	coord: 59..157 e-value: 1.45094E-49 score: 153.498
IPR045037	Phosducin-like	PANTHER	PTHR21148	THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9	coord: 2..165
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 4..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18804-RA	Carg18804-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm