|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGTTGATGGCAACTAGGAAGGATGTTAATAAGTCACATTTTGTAGGCCTGAGATTCCCAATTCTTATTGACAAACACTTTTACTTACAGAATCAAATTGTACATATTCTTCTTCTCTTTCTCTCCCTCTGATTAAACCAGTTCACATTAGAAGGTGAGTATGAAATCTTTGCAACTTTATTGTTAATTTTCTTTCTGTTATCTAACTTTTTGATTAATAAACAAATGATTTGTAAAGCTTATAAAGTATTAATTAGTTGAAATATAAGGAAATGATGTGGTTTCATGTCAATTATGTAATCGGCGAAAAAGGAAGGGGCTGTGTTGATGGGTCTTCTGCCAAATGGGTTTTCTGTGGGAGTAATGGATGTAAGCTTAAATTAGGGGAAGCGCCTGTGTTGCTTTCGCCTAAAAGTGGTAAAGATTTTTATTCCATTATCTCCGACTAAACTAAGGGTGAGGAAACCTCTTCTACCGTATGAAAGGAAGATACATTTCATATAGTCATCTAAATGTTTAAAGCCTACCACTAGCAGATACTATTCGCTTTGGCCCGTTGCGTATAATTGTCAGTTCCACGGCTTTAAAACGCGTCTACTAGGGAATCAGCTCCACGACTTTAAAACGCGTCTACCAAAACACCCTTATGAGAAATGCGTGTTCCCCTCTCAAATTGACGTGGAATTTCACATGATATGTTTGCTTACTTTTTCATTACTGAAAAACGTGCATGTTCATGTTATATTTTACTTTCGTCCTTACCCTTTTAGATTGGATTTCGCAGGATGTTTATCGATTCATATTAAAGACTCCGAATCATGAAAGGTTCTTCCTATTGGCATAATTTGATGCTTAACATACTCATTTTTCATAAGCTTTTTTTGATAAATGCATATGTAAAGAAGCTCAATATGATGTAAAGACATGTCTGCTCACTAAATTGCAGCGCCGAGTGCCATAGAGAAGTGCAAGAACCGAGGTACCCAAGCAAGACATTGAAGACAACCAAGATTGTTCATTATGTTACGAACCGATGCATAATCTTAACAAATGCTAACATTTTTCTGCTTGTGTGTTAGAAAGTTGATTTTTATTGCCTCTCTTAAACTAAGAGTGATCCTCTGAATCAGTATGATACACAGCTCACAAATCACTTTGATTTCATACCTTAGCACGGATGACAATAAGAACAGCACAAAAGGGACAATAAGAACAGCATGTTCGACGCGAAAACGACTCGAAACATGCTGTATTATCTCGAGAAAGCAGGAAGATGAGTATCTGCAGCAGGTGGTGCAGAGGAGGTAAGAAGAAGGTTGTTTTCTGGCAGAGGAGTTGGTTGGTGAAGATGGGTGACATCAGTCTGCAGTGGAGGCTCGACGATAGCGGCAGGATCGGGATTCCGGTCATGGCGTGGACGACGACGACGACGACAGGATTGTTTAAAGAAGCGAGGAAGGAGGTAGCAGAGGAGACGGAGAAAGGAAAGAATGGCAATGAGGAATAA mRNA sequence ATGTTGATGGCAACTAGGAAGGATAGGAGTTGGTTGGTGAAGATGGGTGACATCAGTCTGCAGTGGAGGCTCGACGATAGCGGCAGGATCGGGATTCCGGTCATGGCGTGGACGACGACGACGACGACAGGATTGTTTAAAGAAGCGAGGAAGGAGGTAGCAGAGGAGACGGAGAAAGGAAAGAATGGCAATGAGGAATAA Coding sequence (CDS) ATGTTGATGGCAACTAGGAAGGATAGGAGTTGGTTGGTGAAGATGGGTGACATCAGTCTGCAGTGGAGGCTCGACGATAGCGGCAGGATCGGGATTCCGGTCATGGCGTGGACGACGACGACGACGACAGGATTGTTTAAAGAAGCGAGGAAGGAGGTAGCAGAGGAGACGGAGAAAGGAAAGAATGGCAATGAGGAATAA Protein sequence MLMATRKDRSWLVKMGDISLQWRLDDSGRIGIPVMAWTTTTTTGLFKEARKEVAEETEKGKNGNEE
Homology
BLAST of Carg18775 vs. NCBI nr
Match: KAG7025821.1 (hypothetical protein SDJN02_12319, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 133.3 bits (334), Expect = 7.8e-28 Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0
Query: 1 MLMATRKDRSWLVKMGDISLQWRLDDSGRIGIPVMAWTTTTTTGLFKEARKEVAEETEKG 60
MLMATRKDRSWLVKMGDISLQWRLDDSGRIGIPVMAWTTTTTTGLFKEARKEVAEETEKG
Sbjct: 1 MLMATRKDRSWLVKMGDISLQWRLDDSGRIGIPVMAWTTTTTTGLFKEARKEVAEETEKG 60
Query: 61 KNGNEE 67
KNGNEE
Sbjct: 61 KNGNEE 66
BLAST of Carg18775 vs. NCBI nr
Match: KAG6593477.1 (hypothetical protein SDJN03_12953, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 116.3 bits (290), Expect = 9.9e-23 Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0
Query: 9 RSWLVKMGDISLQWRLDDSGRIGIPVMAWTTTTTTGLFKEARKEVAEETEKGKNGNEE 67
RSWLVKMGDISLQWRLDDSGRIGIPVMAWTTT TTGLFKEARKEVAEETEKGKNGNEE
Sbjct: 20 RSWLVKMGDISLQWRLDDSGRIGIPVMAWTTTMTTGLFKEARKEVAEETEKGKNGNEE 77
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG7025821.1 | 7.8e-28 | 100.00 | hypothetical protein SDJN02_12319, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6593477.1 | 9.9e-23 | 98.28 | hypothetical protein SDJN03_12953, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
|
