Carg18774 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18774
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr08: 3933674 .. 3937001 (-)
RNA-Seq Expression	Carg18774
Synteny	Carg18774

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGGAGCTACTGGCTTTGGATGTTTTAATTCGATCTCTATGCACTCTTTGATTCGAGAGGATTATATCGATAGGTTTGTTAGATTATTTAATTTTCTCGCTTCTTTCGGTTTGACTCGGTACTTGATTTCCGAGTTACTCGTTCGTCTTGTTTTGCAAGCAATTCAACAATAATTAATTAACTTCCCCCATTGATGTTGTTACAGAGGTTAGAAATTGTCGCCTTAAGAAAATGACGAATAAGTTCTTTTAACTGTATGCGTATTCTTCTTTAACAATTATGTATTTAGCGTTTTCTTCTGGAATTTCAATCATCGTCGTTTTTGTAGCTTCAGGTGTGGATTTTGTATTAATTGTGACTTCTTTTTCATTTTTTTTCATGGATTGTTGTTGCTCGAGAGCAGACCAATAACTTGCAGTGGTCACTCGCCTCCATTCCTCTTCTTAAAGCCTTGCAGCTAACTTTATCTTTCCTTTTTTGGTATGTTCAATCTATTTTTCCTTTCCTTTTTTTTGTTTCTGGTAAATGGTGTTATAAACTGTTAAATTGGAATTCAATATCGACGTGAAATCTTCCCTTGATCTGATTTGAAATGAGATTAGTCTGCAAATCTTGTAATTTTATTCTTTACTTTTCTTGTTAGGGACAACCAATTTCGACATATCTCCACAATGGTATGATATTGTCCACTTTGGGTATAAGCTCTTCGTGACTTTGCTTTTGGTTCTCCAAAAGGCTTCTTGTCAATGGAGAAAGTTGTCCTTACTCATATACCATCATCTGGGACTTTGTATTCCCAAAATTTATAGTTTCTCTTGGCCCATTTGAACTCCTATTTAATCTACAATCGCAGGTATTCATGTTTTTATATTGAGACATGCTCCTTATGGATGTCATTTGGGGTATATGTAACTGGAGTGCTCTTTCAGACGGCTTCTGTTGTGTCCTTTTTACTTATTTCTCATGGCTATTGCATCATGTCCGAGCACCTTTCAGTTTCTGAGCGACGAACTACTGCTTCGATTGGCTGTATATTTTATTTGACGCTTGTTGGTTACCAAGCTTCCATACCTTACTTCTCTGTGAGTTTACTGAGCTGTAGCCTCATGCTTTAGAAATGATTGCTGTTGCACGATTTCACCTCCCTTGATTCTCAATCCCAGCTTCCTATTTGATCCAGGTCTTACTTCTGCTTAATTACTTCATTTCCTTCTATGTGATTTTCCACCACATATATCAAAATCTACTGGCATTGCAAGAACAATTGAGTTTCATTATGGAAGAGGACGTTCAAGCTATGCACGATGCCATTCTAACGAAATACAAGATGTTCAAGTATGCAATTACTTTGTAGACTCTTATCTACATGTCATATTTAGATGGTAAATCTTGTTTCTGATGTGCTACTTCCATATATATTACACAGAAAATTCCGGGGAATAATGCAAATTGTTGTCATGGCAGAAATTATGGTACGATTCGATATGGCATCTTATCGTTAAATCGATTTTATATGTTATATATGGATCAGTCCTCATTCCTCAGTCTTTTGTTTGGTTTTCAGATATTCCTGAACATGGACGATTCAGTGGAAATTTACTGGCTTCGTCTGTTAGTACGAGAATGGGCCCTCTTCTGCATCTTCTGCTACATCGGGTATGTATATGTATATGTATATGTATATGATCATACTTTTATGAGAATAGCTTAATTTTTCTTGGGAGAATTTCAGTCTGTAAGGTTATTGGCTTTTTCCTCTCCATATTGCAGCTGGATCTTTAGGTCCCAAGACTTGGCCTCCCGTTTCTCTGTTATGCAAACTTTTAAGTCTGAAGAGAATAGGATTATCCCTCCTATTTACAGCGTTGTAAGTATTACATTAGAATCAATACAGAGACAATGAACCCAGAAATCTTTTTTCTCTCTTAATCTTTTGTTGACTTGTAAAATTTACTAGCAAGGTAATTTATTAGAATCATACAAAATAGTGTTAGTGAAGATCGATAATGAACATTGCTTAAAGTTGAAGGGGCCATCCTTCAGATGCAATTTTGTTTACTAATTGCTGGAAGAATTACAGGACGTGGATGCATCAACTTTTAGAGAGTTTAACAGTCATAATTGGCAAATTGGCGTGGTAAATTCTTTGAGCTAGTTATGTTATTTCAGTTTCATCTTCATTTTGATGTTCTTAAACATATTACTTACTACAATACATTTTGAGAGACTCTGTTTATTCGACGCAGCCGACCTCACTCTCCCAAATGGAAAGTTCGAAGGAATCGATTTTTGTGATAATTCAACACCCTCGTGTATGTAATGTCAACAAAAAATCCACGCCAAACCCAGCAGATTCCAAGTCTTCGCCTACAGATGAGGCCAGGCATTCATGATCTGATGCAACTCAGCCTTTTGATGGAGTTGTTTTTCTTTTTTGTTTGTTTTTTTTCCCATCTTTTTCCCGTTCAACAGGTACACAGCAGTTCGCATTTTACAGAAAATGTTGATGGCAACTAGGAAGGATGTTAATAAGTCACATTTTGTAGGCCTGAGATTCCCAATTCTTATTGACAAACACTTTTACTTACAGAATCAAATTGTACATATTCTTCTTCTCTTTCTCTCCCTCTGATTAAACCAGTTCACATTAGAAGGTGAGTATGAAATCTTTGCAACTTTATTGTTAATTTTCTTTCTGTTATCTAACTTTTTGATTAATAAACAAATGATTTGTAAAGCTTATAAAGTATTAATTAGTTGAAATATAAGGAAATGATGTGGTTTCATGTCAATTATGTAATCGGCGAAAAAGGAAGGGGCTGTGTTGATGGGTCTTCTGCCAAATGGGTTTTCTGTGGGAGTAATGGATGTAAGCTTAAATTAGGGGAAGCGCCTGTGTTGCTTTCGCCTAAAAGTGGTAAAGATTTTTATTCCATTATCTCCGACTAAACTAAGGGTGAGGAAACCTCTTCTACCGTATGAAAGGAAGATACATTTCATATAGTCATCTAAATGTTTAAAGCCTACCACTAGCAGATACTATTCGCTTTGGCCCGTTGCGTATAATTGTCAGTTCCACGGCTTTAAAACGCGTCTACTAGGGAATCAGCTCCACGACTTTAAAACGCGTCTACCAAAACACCCTTATGAGAAATGCGTGTTCCCCTCTCAAATTGACGTGGAATTTCACATGATATGTTTGCTTACTTTTTCATTACTGAAAAACGTGCATGTTCATGTTATATTTTACTTTCGTCCTTACCCTTTTAGATTGGATTTCGCAGGATGTTTATCGATTCATATTAAAGACTCCGAATCATGAAAGGTT

mRNA sequence

ACGGAGCTACTGGCTTTGGATGTTTTAATTCGATCTCTATGCACTCTTTGATTCGAGAGGATTATATCGATAGGTTTGTTAGATTATTTAATTTTCTCGCTTCTTTCGGTTTGACTCGGTACTTGATTTCCGAGTTACTCGTTCGTCTTGTTTTGTTACAGAGGTTAGAAATTGTCGCCTTAAGAAAATGACGAATAAGTTCTTTTAACTGTATGCGTATTCTTCTTTAACAATTATGTATTTAGCGTTTTCTTCTGGAATTTCAATCATCGTCGTTTTTGTAGCTTCAGGTGTGGATTTTGTATTAATTGTGACTTCTTTTTCATTTTTTTTCATGGATTGTTGTTGCTCGAGAGCAGACCAATAACTTGCAGTGGTCACTCGCCTCCATTCCTCTTCTTAAAGCCTTGCAGCTAACTTTATCTTTCCTTTTTTGGGACAACCAATTTCGACATATCTCCACAATGGTATTCATGTTTTTATATTGAGACATGCTCCTTATGGATGTCATTTGGGGTATATGTAACTGGAGTGCTCTTTCAGACGGCTTCTGTTGTGTCCTTTTTACTTATTTCTCATGGCTATTGCATCATGTCCGAGCACCTTTCAGTTTCTGAGCGACGAACTACTGCTTCGATTGGCTGTATATTTTATTTGACGCTTGTTGGTTACCAAGCTTCCATACCTTACTTCTCTCTTCCTATTTGATCCAGGTCTTACTTCTGCTTAATTACTTCATTTCCTTCTATGTGATTTTCCACCACATATATCAAAATCTACTGGCATTGCAAGAACAATTGAGTTTCATTATGGAAGAGGACGTTCAAGCTATGCACGATGCCATTCTAACGAAATACAAGATGTTCAAAAAATTCCGGGGAATAATGCAAATTGTTGTCATGGCAGAAATTATGATATTCCTGAACATGGACGATTCAGTGGAAATTTACTGGCTTCGTCTGTTAGTACGAGAATGGGCCCTCTTCTGCATCTTCTGCTACATCGGCTGGATCTTTAGGTCCCAAGACTTGGCCTCCCGTTTCTCTGTTATGCAAACTTTTAAGTCTGAAGAGAATAGGATTATCCCTCCTATTTACAGCGTTGACGTGGATGCATCAACTTTTAGAGAGTTTAACAGTCATAATTGGCAAATTGGCGTGCCGACCTCACTCTCCCAAATGGAAAGTTCGAAGGAATCGATTTTTGTGATAATTCAACACCCTCGTGTATGTAATGTCAACAAAAAATCCACGCCAAACCCAGCAGATTCCAAGTCTTCGCCTACAGATGAGGCCAGGCATTCATGATCTGATGCAACTCAGCCTTTTGATGGAGTTGTTTTTCTTTTTTGTTTGTTTTTTTTCCCATCTTTTTCCCGTTCAACAGGTACACAGCAGTTCGCATTTTACAGAAAATGTTGATGGCAACTAGGAAGGATGTTAATAAGTCACATTTTGTAGGCCTGAGATTCCCAATTCTTATTGACAAACACTTTTACTTACAGAATCAAATTGTACATATTCTTCTTCTCTTTCTCTCCCTCTGATTAAACCAGTTCACATTAGAAGGATGTTTATCGATTCATATTAAAGACTCCGAATCATGAAAGGTT

Coding sequence (CDS)

ATGGAAGAGGACGTTCAAGCTATGCACGATGCCATTCTAACGAAATACAAGATGTTCAAAAAATTCCGGGGAATAATGCAAATTGTTGTCATGGCAGAAATTATGATATTCCTGAACATGGACGATTCAGTGGAAATTTACTGGCTTCGTCTGTTAGTACGAGAATGGGCCCTCTTCTGCATCTTCTGCTACATCGGCTGGATCTTTAGGTCCCAAGACTTGGCCTCCCGTTTCTCTGTTATGCAAACTTTTAAGTCTGAAGAGAATAGGATTATCCCTCCTATTTACAGCGTTGACGTGGATGCATCAACTTTTAGAGAGTTTAACAGTCATAATTGGCAAATTGGCGTGCCGACCTCACTCTCCCAAATGGAAAGTTCGAAGGAATCGATTTTTGTGATAATTCAACACCCTCGTGTATGTAATGTCAACAAAAAATCCACGCCAAACCCAGCAGATTCCAAGTCTTCGCCTACAGATGAGGCCAGGCATTCATGA

Protein sequence

MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFCIFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTSLSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDEARHS

Homology

[Close]

BLAST of Carg18774 vs. NCBI nr
Match: KAG7025822.1 (hypothetical protein SDJN02_12320 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330.1 bits (845), Expect = 1.1e-86
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC 60
           MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC
Sbjct: 1   MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC 60

Query: 61  IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS 120
           IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS
Sbjct: 61  IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS 120

Query: 121 LSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDEARHS 166
           LSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDEARHS
Sbjct: 121 LSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDEARHS 165

[Close]

BLAST of Carg18774 vs. NCBI nr
Match: XP_022964205.1 (uncharacterized protein LOC111464293 [Cucurbita moschata])

HSP 1 Score: 330.1 bits (845), Expect = 1.1e-86
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC 60
           MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC
Sbjct: 186 MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC 245

Query: 61  IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS 120
           IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS
Sbjct: 246 IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS 305

Query: 121 LSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDEARHS 166
           LSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDEARHS
Sbjct: 306 LSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDEARHS 350

[Close]

BLAST of Carg18774 vs. NCBI nr
Match: KAG6593478.1 (hypothetical protein SDJN03_12954, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 330.1 bits (845), Expect = 1.1e-86
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC 60
           MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC
Sbjct: 186 MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC 245

Query: 61  IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS 120
           IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS
Sbjct: 246 IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS 305

Query: 121 LSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDEARHS 166
           LSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDEARHS
Sbjct: 306 LSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDEARHS 350

[Close]

BLAST of Carg18774 vs. NCBI nr
Match: XP_023513652.1 (uncharacterized protein LOC111778194 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 325.9 bits (834), Expect = 2.1e-85
Identity = 162/165 (98.18%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC 60
           MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC
Sbjct: 186 MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC 245

Query: 61  IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS 120
           IFCYIGWIFRSQDLASRFSVMQTFKSEENRI+PPIYSVDVDASTFREFNSHNWQIGVPTS
Sbjct: 246 IFCYIGWIFRSQDLASRFSVMQTFKSEENRIVPPIYSVDVDASTFREFNSHNWQIGVPTS 305

Query: 121 LSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDEARHS 166
           LSQMESSKESIFVIIQHPRVCNVNKKS PNP DSKSSPTDEARHS
Sbjct: 306 LSQMESSKESIFVIIQHPRVCNVNKKSMPNPTDSKSSPTDEARHS 350

[Close]

BLAST of Carg18774 vs. NCBI nr
Match: XP_023000367.1 (uncharacterized protein LOC111494623 [Cucurbita maxima])

HSP 1 Score: 322.0 bits (824), Expect = 3.0e-84
Identity = 160/165 (96.97%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC 60
           MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC
Sbjct: 186 MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC 245

Query: 61  IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS 120
           IFCYIGWIFRSQDLASRFSVMQTFKSEENRI+PPIYSVDVDASTFREFNSHNWQIGVPTS
Sbjct: 246 IFCYIGWIFRSQDLASRFSVMQTFKSEENRIVPPIYSVDVDASTFREFNSHNWQIGVPTS 305

Query: 121 LSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDEARHS 166
           LSQMESSKESIFVIIQHPRVCN NKK TPNPADS+SSP DEARHS
Sbjct: 306 LSQMESSKESIFVIIQHPRVCNFNKKFTPNPADSESSPADEARHS 350

[Close]

BLAST of Carg18774 vs. ExPASy TrEMBL
Match: A0A6J1HK69 (uncharacterized protein LOC111464293 OS=Cucurbita moschata OX=3662 GN=LOC111464293 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 5.3e-87
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC 60
           MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC
Sbjct: 186 MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC 245

Query: 61  IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS 120
           IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS
Sbjct: 246 IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS 305

Query: 121 LSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDEARHS 166
           LSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDEARHS
Sbjct: 306 LSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDEARHS 350

[Close]

BLAST of Carg18774 vs. ExPASy TrEMBL
Match: A0A6J1KDG4 (uncharacterized protein LOC111494623 OS=Cucurbita maxima OX=3661 GN=LOC111494623 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.4e-84
Identity = 160/165 (96.97%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC 60
           MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC
Sbjct: 186 MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC 245

Query: 61  IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS 120
           IFCYIGWIFRSQDLASRFSVMQTFKSEENRI+PPIYSVDVDASTFREFNSHNWQIGVPTS
Sbjct: 246 IFCYIGWIFRSQDLASRFSVMQTFKSEENRIVPPIYSVDVDASTFREFNSHNWQIGVPTS 305

Query: 121 LSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDEARHS 166
           LSQMESSKESIFVIIQHPRVCN NKK TPNPADS+SSP DEARHS
Sbjct: 306 LSQMESSKESIFVIIQHPRVCNFNKKFTPNPADSESSPADEARHS 350

[Close]

BLAST of Carg18774 vs. ExPASy TrEMBL
Match: A0A6J1GPD8 (uncharacterized protein LOC111456257 OS=Cucurbita moschata OX=3662 GN=LOC111456257 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.8e-63
Identity = 124/161 (77.02%), Postives = 138/161 (85.71%), Query Frame = 0


Query: 1   MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC 60
           MEEDVQAMHDAI TKYKM KKF+GIMQIV MAEI+IFLN+DDSVEIYWLRLLVREWA FC
Sbjct: 186 MEEDVQAMHDAIHTKYKMLKKFQGIMQIVAMAEIVIFLNVDDSVEIYWLRLLVREWAQFC 245

Query: 61  IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS 120
           IF YIGWIFRSQD+A RFSVM T KSE +RI+PPIYS++VDA+TFRE ++HNW IGVPTS
Sbjct: 246 IFSYIGWIFRSQDMAPRFSVMPTVKSENSRIVPPIYSIEVDAATFREVSTHNWHIGVPTS 305

Query: 121 LSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDE 162
           LS+ E SK+S  VIIQHPR  N N +S PNPAD  SSP DE
Sbjct: 306 LSRNEGSKDSFIVIIQHPRAYNANNRSMPNPADFGSSPADE 346

[Close]

BLAST of Carg18774 vs. ExPASy TrEMBL
Match: A0A6J1JYW4 (uncharacterized protein LOC111488668 OS=Cucurbita maxima OX=3661 GN=LOC111488668 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.6e-62
Identity = 123/161 (76.40%), Postives = 137/161 (85.09%), Query Frame = 0


Query: 1   MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC 60
           MEEDVQAMHDAI TKYKM KKF+GIMQIV MAEI+IFLN+DDSVEIYWLRLLVREWA FC
Sbjct: 186 MEEDVQAMHDAIHTKYKMLKKFQGIMQIVAMAEIVIFLNVDDSVEIYWLRLLVREWAQFC 245

Query: 61  IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS 120
           IF YIGWIFRSQD+A RFSVM T KSE +RI+PPIYS++VDA+TFRE ++HNW IGVPTS
Sbjct: 246 IFSYIGWIFRSQDMAPRFSVMPTVKSENSRIVPPIYSIEVDAATFREVSTHNWHIGVPTS 305

Query: 121 LSQMESSKESIFVIIQHPRVCNVNKKSTPNPADSKSSPTDE 162
           LS+ E SK+S  VIIQHPR  N N +S PNPA   SSP DE
Sbjct: 306 LSRNEGSKDSFIVIIQHPRAYNANNQSMPNPAKVGSSPADE 346

[Close]

BLAST of Carg18774 vs. ExPASy TrEMBL
Match: A0A6J1CUT0 (uncharacterized protein LOC111014537 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014537 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.5e-60
Identity = 123/166 (74.10%), Postives = 137/166 (82.53%), Query Frame = 0


Query: 1   MEEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFC 60
           MEEDVQAMHDAI TKY+MFKKF+G+MQIV MAEI IFLNMDDS+E YWLRLLVREWA FC
Sbjct: 185 MEEDVQAMHDAIQTKYEMFKKFQGVMQIVAMAEIAIFLNMDDSLETYWLRLLVREWAQFC 244

Query: 61  IFCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTS 120
           IF YIGWIFRSQD+A RFSVM T KSE++RI+PPIYSV+VDA+TFREF+SHNW IGVPTS
Sbjct: 245 IFSYIGWIFRSQDMAPRFSVMPTVKSEDSRIVPPIYSVEVDAATFREFSSHNWHIGVPTS 304

Query: 121 LSQMESSKESIFVIIQHPRVCNVNKKST-PNPADSKSSPTDEARHS 166
           LS  +S K+SI VIIQHP   N     T P PAD   SP DEA +S
Sbjct: 305 LSSGDSLKDSIIVIIQHPHAYNNGSNQTKPXPADFAYSPADEAGYS 350

[Close]

BLAST of Carg18774 vs. TAIR 10
Match: AT1G52155.1 (unknown protein; Has 37 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 192.6 bits (488), Expect = 2.5e-49
Identity = 90/138 (65.22%), Postives = 109/138 (78.99%), Query Frame = 0


Query: 2   EEDVQAMHDAILTKYKMFKKFRGIMQIVVMAEIMIFLNMDDSVEIYWLRLLVREWALFCI 61
           +E+VQAMHDA+  KY MFKKF+G MQIV MAE +I++NMD+S + YWLRLL+REWA FCI
Sbjct: 182 DENVQAMHDAVYAKYIMFKKFQGAMQIVAMAETVIYMNMDNSSQNYWLRLLIREWAQFCI 241

Query: 62  FCYIGWIFRSQDLASRFSVMQTFKSEENRIIPPIYSVDVDASTFREFNSHNWQIGVPTSL 121
           F YIGW FRSQD+A RFSVM T K +EN IIPPIYS+++DA +F+EF S  W IGVP   
Sbjct: 242 FLYIGWTFRSQDMAPRFSVMPTLKPKENTIIPPIYSMEMDAKSFKEFRSQEWNIGVPMPY 301

Query: 122 SQMESSKESIFVIIQHPR 140
           S  E  K+S+ VIIQHPR
Sbjct: 302 SNYEKQKDSVLVIIQHPR 319

The following BLAST results are available for this feature:

BLAST of Carg18774 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025822.1	1.1e-86	100.00	hypothetical protein SDJN02_12320 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022964205.1	1.1e-86	100.00	uncharacterized protein LOC111464293 [Cucurbita moschata]	[more]
KAG6593478.1	1.1e-86	100.00	hypothetical protein SDJN03_12954, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023513652.1	2.1e-85	98.18	uncharacterized protein LOC111778194 [Cucurbita pepo subsp. pepo]	[more]
XP_023000367.1	3.0e-84	96.97	uncharacterized protein LOC111494623 [Cucurbita maxima]	[more]

BLAST of Carg18774 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg18774 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HK69	5.3e-87	100.00	uncharacterized protein LOC111464293 OS=Cucurbita moschata OX=3662 GN=LOC1114642...	[more]
A0A6J1KDG4	1.4e-84	96.97	uncharacterized protein LOC111494623 OS=Cucurbita maxima OX=3661 GN=LOC111494623...	[more]
A0A6J1GPD8	1.8e-63	77.02	uncharacterized protein LOC111456257 OS=Cucurbita moschata OX=3662 GN=LOC1114562...	[more]
A0A6J1JYW4	1.6e-62	76.40	uncharacterized protein LOC111488668 OS=Cucurbita maxima OX=3661 GN=LOC111488668...	[more]
A0A6J1CUT0	1.5e-60	74.10	uncharacterized protein LOC111014537 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Carg18774 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52155.1	2.5e-49	65.22	unknown protein; Has 37 Blast hits to 37 proteins in 13 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..165
None	No IPR available	PANTHER	PTHR21229:SF61	BNAA06G01930D PROTEIN	coord: 5..146
IPR009637	Transmembrane protein GPR107/GPR108-like	PANTHER	PTHR21229	LUNG SEVEN TRANSMEMBRANE RECEPTOR	coord: 5..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18774-RA	Carg18774-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane