Carg18773 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18773
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ethylene-responsive transcription factor TINY-like
Location	Carg_Chr08: 3940907 .. 3941554 (+)
RNA-Seq Expression	Carg18773
Synteny	Carg18773

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGCCAAAGAGCCCATTCCCCACTACTCCACCACCACTTTCTTCTTCATTTCCGTCCACCCGACCGGTTTCCGGTGCCGGACCGGCTCAACCAGACCCACCGCCCCGCAAGAGAACCAGAGACTGCAACAGACATCCTGTTTTCAGAGGCGTACGGAAGAGAAGCTGGGGTAAATGGGTGTCGGAAATCCGCCAGCCGCGTAAGAAATCCCGAATTTGGCTCGGCACTTTTCCCACGCCGGAAATGGCAGCGCGTGCACACGACGCGGCTGCGTTGTGCATTAAAGGTGACTCGGCCATCCTCAATTACCCTGAACTCGCCTCATTTTTGCCCCGCCCCGCGTCGCTCATGCCGCACGATATTCAAGCCGCCGCCGCTAAAGCGGCGGCGATGGCCACTGCATTGCCGTCGCCATCGGAGGAGGAGGAGGAGCTTAGTGAGATTGTGGAGTTACCGAATATAGAAGACGATTTTGGTACTGAGTCACTGAACGAATTCAAATTGGTTACTGAATCGTGGGAATGGTGGGAGTACGTGGCAATGCCGTTGGCGGCAGAATTCGGCGGCTGTTCTATCTCCGACCAATTGACGGCGGAGGACAGTTTATTCCCCTGCAGCTTTTATGGTGCTCTGTGGGATTAA

mRNA sequence

ATGGCGAAGCCAAAGAGCCCATTCCCCACTACTCCACCACCACTTTCTTCTTCATTTCCGTCCACCCGACCGGTTTCCGGTGCCGGACCGGCTCAACCAGACCCACCGCCCCGCAAGAGAACCAGAGACTGCAACAGACATCCTGTTTTCAGAGGCGTACGGAAGAGAAGCTGGGGTAAATGGGTGTCGGAAATCCGCCAGCCGCGTAAGAAATCCCGAATTTGGCTCGGCACTTTTCCCACGCCGGAAATGGCAGCGCGTGCACACGACGCGGCTGCGTTGTGCATTAAAGGTGACTCGGCCATCCTCAATTACCCTGAACTCGCCTCATTTTTGCCCCGCCCCGCGTCGCTCATGCCGCACGATATTCAAGCCGCCGCCGCTAAAGCGGCGGCGATGGCCACTGCATTGCCGTCGCCATCGGAGGAGGAGGAGGAGCTTAGTGAGATTGTGGAGTTACCGAATATAGAAGACGATTTTGGTACTGAGTCACTGAACGAATTCAAATTGGTTACTGAATCGTGGGAATGGTGGGAGTACGTGGCAATGCCGTTGGCGGCAGAATTCGGCGGCTGTTCTATCTCCGACCAATTGACGGCGGAGGACAGTTTATTCCCCTGCAGCTTTTATGGTGCTCTGTGGGATTAA

Coding sequence (CDS)

ATGGCGAAGCCAAAGAGCCCATTCCCCACTACTCCACCACCACTTTCTTCTTCATTTCCGTCCACCCGACCGGTTTCCGGTGCCGGACCGGCTCAACCAGACCCACCGCCCCGCAAGAGAACCAGAGACTGCAACAGACATCCTGTTTTCAGAGGCGTACGGAAGAGAAGCTGGGGTAAATGGGTGTCGGAAATCCGCCAGCCGCGTAAGAAATCCCGAATTTGGCTCGGCACTTTTCCCACGCCGGAAATGGCAGCGCGTGCACACGACGCGGCTGCGTTGTGCATTAAAGGTGACTCGGCCATCCTCAATTACCCTGAACTCGCCTCATTTTTGCCCCGCCCCGCGTCGCTCATGCCGCACGATATTCAAGCCGCCGCCGCTAAAGCGGCGGCGATGGCCACTGCATTGCCGTCGCCATCGGAGGAGGAGGAGGAGCTTAGTGAGATTGTGGAGTTACCGAATATAGAAGACGATTTTGGTACTGAGTCACTGAACGAATTCAAATTGGTTACTGAATCGTGGGAATGGTGGGAGTACGTGGCAATGCCGTTGGCGGCAGAATTCGGCGGCTGTTCTATCTCCGACCAATTGACGGCGGAGGACAGTTTATTCCCCTGCAGCTTTTATGGTGCTCTGTGGGATTAA

Protein sequence

MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAMATALPSPSEEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEYVAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD

Homology

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BLAST of Carg18773 vs. NCBI nr
Match: KAG6593479.1 (Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025823.1 Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 435.3 bits (1118), Expect = 3.1e-118
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK
Sbjct: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120

Query: 121 HDIQAAAAKAAAMATALPSPSEEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEY 180
           HDIQAAAAKAAAMATALPSPSEEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEY
Sbjct: 121 HDIQAAAAKAAAMATALPSPSEEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEY 180

Query: 181 VAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD 216
           VAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD
Sbjct: 181 VAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD 215

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BLAST of Carg18773 vs. NCBI nr
Match: XP_023514993.1 (ethylene-responsive transcription factor ERF036-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 420.6 bits (1080), Expect = 8.0e-114
Identity = 210/217 (96.77%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPKS FPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK
Sbjct: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120

Query: 121 HDIQAAAAKAAAMATALPSPS--EEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWW 180
           HDIQAAAAKAAAMATALPSPS  EEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWW
Sbjct: 121 HDIQAAAAKAAAMATALPSPSEEEEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWW 180

Query: 181 EYVAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD 216
           EYVAMPLAAEFGGCS SDQ  AEDS+FPCSFYGALWD
Sbjct: 181 EYVAMPLAAEFGGCSFSDQWAAEDSIFPCSFYGALWD 217

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BLAST of Carg18773 vs. NCBI nr
Match: XP_022964007.1 (ethylene-responsive transcription factor TINY-like [Cucurbita moschata])

HSP 1 Score: 419.9 bits (1078), Expect = 1.4e-113
Identity = 210/215 (97.67%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPKS FPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK
Sbjct: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120

Query: 121 HDIQAAAAKAAAMATALPSPSEEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEY 180
           HDIQAAAAKAAAMATALPSPS EEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEY
Sbjct: 121 HDIQAAAAKAAAMATALPSPS-EEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEY 180

Query: 181 VAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD 216
           VAMPLAAEFG CS SDQL AEDSLFPCSFYGALWD
Sbjct: 181 VAMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 214

[Close]

BLAST of Carg18773 vs. NCBI nr
Match: XP_023000389.1 (ethylene-responsive transcription factor TINY-like [Cucurbita maxima])

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 206/216 (95.37%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPKS +PTTPPPLSSSFPSTRPV GAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK
Sbjct: 1   MAKPKSSYPTTPPPLSSSFPSTRPVPGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSA LNYPELAS+LPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSATLNYPELASYLPRPASLMP 120

Query: 121 HDIQAAAAKAAAMATALPSPS-EEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWE 180
           HDIQAAAAKAAAMATALPSPS EEEEELSEIVELPNIEDDFGTESLNEFKLV ESWEWWE
Sbjct: 121 HDIQAAAAKAAAMATALPSPSEEEEEELSEIVELPNIEDDFGTESLNEFKLVAESWEWWE 180

Query: 181 YVAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD 216
           YVAMPLAAEF GCS SDQL AEDSLFPCSFYGALWD
Sbjct: 181 YVAMPLAAEFDGCSFSDQLAAEDSLFPCSFYGALWD 216

[Close]

BLAST of Carg18773 vs. NCBI nr
Match: XP_022146662.1 (dehydration-responsive element-binding protein 3 [Momordica charantia])

HSP 1 Score: 312.4 bits (799), Expect = 3.1e-81
Identity = 171/221 (77.38%), Postives = 179/221 (81.00%), Query Frame = 0


Query: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPK+  P T P           VSGAG  QPD P  KR RDCNRHP+FRGVRKRSWGK
Sbjct: 1   MAKPKNSDPQTIP----------AVSGAGAVQPDRPAAKRARDCNRHPLFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAAL IKGDSAILNYPELA FLPRPASL P
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALSIKGDSAILNYPELAQFLPRPASLTP 120

Query: 121 HDIQAAAAKAAAM----ATALPSPSEEEEELSEIVELPNIEDDFGTESLNEFKLVTESWE 180
           HDIQAAAAKAAAM    +T+ PSPS EEEELSEIVELPNIEDDF TES +EF LVTESWE
Sbjct: 121 HDIQAAAAKAAAMVNFKSTSSPSPS-EEEELSEIVELPNIEDDFATESQSEFALVTESWE 180

Query: 181 WWEYVAMP--LAAEFGGCSISDQLTAEDSLFPCSFYGALWD 216
           WWE VAMP  LAAEFGG   S+Q TAE++LFP  FYGALWD
Sbjct: 181 WWECVAMPLELAAEFGGDFYSNQTTAEENLFPGCFYGALWD 210

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BLAST of Carg18773 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.7e-37
Identity = 89/168 (52.98%), Postives = 110/168 (65.48%), Query Frame = 0


Query: 38  RKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIK 97
           +K  +D  +HPV+RGVRKR+WGKWVSEIR+PRKKSRIWLGTFP+PEMAARAHD AAL IK
Sbjct: 24  KKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIK 83

Query: 98  GDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAMATA--------------------- 157
           G SAILN+P+LA   PRP+SL P DIQ AA KAA M T+                     
Sbjct: 84  GASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLE 143

Query: 158 --LPSPSEEEEELSEIVELPNIEDDFG--TESLNEFKLVTESWEWWEY 181
             + S +   EEL EIVELP++   +   T+  NEF + ++S + W Y
Sbjct: 144 SLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEF-IFSDSADLWPY 190

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BLAST of Carg18773 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.8e-37
Identity = 91/167 (54.49%), Postives = 105/167 (62.87%), Query Frame = 0


Query: 25  VSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEM 84
           VS    A+      KR RD  +HPV+RGVR R+WGKWVSEIR+PRKKSRIWLGTFPTPEM
Sbjct: 26  VSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEM 85

Query: 85  AARAHDAAALCIKGDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAM----------- 144
           AARAHD AAL IKG +AILN+PELA   PRP SL P DIQ AA KAA M           
Sbjct: 86  AARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTS 145

Query: 145 -ATALPSPSE-------------EEEELSEIVELPNIEDDFGTESLN 167
            +++L S S              E EEL EIVELP++   +  +S N
Sbjct: 146 SSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSAN 192

[Close]

BLAST of Carg18773 vs. ExPASy Swiss-Prot
Match: Q9LU18 (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 GN=ERF036 PE=2 SV=2)

HSP 1 Score: 154.1 bits (388), Expect = 1.8e-36
Identity = 98/205 (47.80%), Postives = 122/205 (59.51%), Query Frame = 0


Query: 11  TPPPLSSSFPSTRPVSGAGPAQPDPPP-----RKRTRDCN--------RHPVFRGVRKRS 70
           +P   SS        +    ++ + PP     RKR RD +        +HPV+RGVR RS
Sbjct: 9   SPTSSSSDQSDATTTTSTHLSEEEAPPRNNNTRKRRRDSSSASSSSSMQHPVYRGVRMRS 68

Query: 71  WGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPAS 130
           WGKWVSEIRQPRKK+RIWLGTF T +MAARAHD AAL IKG SA+LN+PELAS  PRPAS
Sbjct: 69  WGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPAS 128

Query: 131 LMPHDIQAAAAKAAAM--------------------ATALPSPSEEEEELSEIVELPNIE 181
             PHDIQ AAA+AAAM                    ++ + + SE+EE L +IVELPNIE
Sbjct: 129 SSPHDIQTAAAEAAAMVVEEKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIE 188

[Close]

BLAST of Carg18773 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.0e-36
Identity = 94/176 (53.41%), Postives = 111/176 (63.07%), Query Frame = 0


Query: 38  RKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIK 97
           +KR R     P +RGVR R+WGKWVSEIR+PRKKSRIWLGTF TPEMAARAHDAAAL IK
Sbjct: 34  KKRVRS---DPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIK 93

Query: 98  GDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAM------------------------ 157
           G SA+LN+PELA++LPRPAS  P D+QAAAA AAAM                        
Sbjct: 94  GTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQ 153

Query: 158 ---------ATALPSPSEEE-----EELSEIVELPNIEDDFGTESLNEFKLVTESW 176
                     ++  SPS EE     EELSEIVELP++E  +  ESL+EF  V  ++
Sbjct: 154 LSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSY-DESLSEFVYVDSAY 205

[Close]

BLAST of Carg18773 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 9.4e-33
Identity = 74/115 (64.35%), Postives = 85/115 (73.91%), Query Frame = 0


Query: 34  DPPPRKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAA 93
           D    K  ++ N+ PV+RGVR RSWGKWVSEIR+PRKKSRIWLGTFPT EMA RAHD AA
Sbjct: 3   DSSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAA 62

Query: 94  LCIKGDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAM---ATALPSPSEEEE 146
           + IKG SAILN+PEL+  LPRP SL P D++AAA KAA M    TA  S +E  E
Sbjct: 63  MSIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSE 117

[Close]

BLAST of Carg18773 vs. ExPASy TrEMBL
Match: A0A6J1HGN7 (ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662 GN=LOC111464158 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.6e-114
Identity = 210/215 (97.67%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPKS FPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK
Sbjct: 1   MAKPKSSFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120

Query: 121 HDIQAAAAKAAAMATALPSPSEEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEY 180
           HDIQAAAAKAAAMATALPSPS EEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEY
Sbjct: 121 HDIQAAAAKAAAMATALPSPS-EEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEY 180

Query: 181 VAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD 216
           VAMPLAAEFG CS SDQL AEDSLFPCSFYGALWD
Sbjct: 181 VAMPLAAEFGSCSFSDQLAAEDSLFPCSFYGALWD 214

[Close]

BLAST of Carg18773 vs. ExPASy TrEMBL
Match: A0A6J1KJR8 (ethylene-responsive transcription factor TINY-like OS=Cucurbita maxima OX=3661 GN=LOC111494646 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.2e-112
Identity = 206/216 (95.37%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPKS +PTTPPPLSSSFPSTRPV GAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK
Sbjct: 1   MAKPKSSYPTTPPPLSSSFPSTRPVPGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSA LNYPELAS+LPRPASLMP
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSATLNYPELASYLPRPASLMP 120

Query: 121 HDIQAAAAKAAAMATALPSPS-EEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWE 180
           HDIQAAAAKAAAMATALPSPS EEEEELSEIVELPNIEDDFGTESLNEFKLV ESWEWWE
Sbjct: 121 HDIQAAAAKAAAMATALPSPSEEEEEELSEIVELPNIEDDFGTESLNEFKLVAESWEWWE 180

Query: 181 YVAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD 216
           YVAMPLAAEF GCS SDQL AEDSLFPCSFYGALWD
Sbjct: 181 YVAMPLAAEFDGCSFSDQLAAEDSLFPCSFYGALWD 216

[Close]

BLAST of Carg18773 vs. ExPASy TrEMBL
Match: A0A6J1D072 (dehydration-responsive element-binding protein 3 OS=Momordica charantia OX=3673 GN=LOC111015808 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.5e-81
Identity = 171/221 (77.38%), Postives = 179/221 (81.00%), Query Frame = 0


Query: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPK+  P T P           VSGAG  QPD P  KR RDCNRHP+FRGVRKRSWGK
Sbjct: 1   MAKPKNSDPQTIP----------AVSGAGAVQPDRPAAKRARDCNRHPLFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAAL IKGDSAILNYPELA FLPRPASL P
Sbjct: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALSIKGDSAILNYPELAQFLPRPASLTP 120

Query: 121 HDIQAAAAKAAAM----ATALPSPSEEEEELSEIVELPNIEDDFGTESLNEFKLVTESWE 180
           HDIQAAAAKAAAM    +T+ PSPS EEEELSEIVELPNIEDDF TES +EF LVTESWE
Sbjct: 121 HDIQAAAAKAAAMVNFKSTSSPSPS-EEEELSEIVELPNIEDDFATESQSEFALVTESWE 180

Query: 181 WWEYVAMP--LAAEFGGCSISDQLTAEDSLFPCSFYGALWD 216
           WWE VAMP  LAAEFGG   S+Q TAE++LFP  FYGALWD
Sbjct: 181 WWECVAMPLELAAEFGGDFYSNQTTAEENLFPGCFYGALWD 210

[Close]

BLAST of Carg18773 vs. ExPASy TrEMBL
Match: A0A5D3BW76 (Dehydration-responsive element-binding protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002010 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.4e-79
Identity = 163/219 (74.43%), Postives = 174/219 (79.45%), Query Frame = 0


Query: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPK+   + P   ++  P+TRP              KR RDCN+HPVFRGVRKRSWGK
Sbjct: 1   MAKPKN---SNPQNKTTPLPTTRPAG------------KRPRDCNKHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRK SRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELA FLPRPASLMP
Sbjct: 61  WVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMP 120

Query: 121 HDIQAAAAKAAAM----ATALPSPSEEEEELSEIVELPNIEDDFGTESLNEFKLVTESWE 180
            D+QAAAAKAAAM    + ALPS   EEEELSEIVELPNIEDDFGTESLNEFKLVTESWE
Sbjct: 121 QDVQAAAAKAAAMVHLNSAALPS---EEEELSEIVELPNIEDDFGTESLNEFKLVTESWE 180

Query: 181 WWEYVAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD 216
           WWE VAMPLAAEFG    S+Q TAE+  +P SFYG LWD
Sbjct: 181 WWESVAMPLAAEFGYGYFSEQTTAEEGCYPSSFYGVLWD 201

[Close]

BLAST of Carg18773 vs. ExPASy TrEMBL
Match: A0A1S3CGW5 (dehydration-responsive element-binding protein 3-like OS=Cucumis melo OX=3656 GN=LOC103500606 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.4e-79
Identity = 163/219 (74.43%), Postives = 174/219 (79.45%), Query Frame = 0


Query: 1   MAKPKSPFPTTPPPLSSSFPSTRPVSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGK 60
           MAKPK+   + P   ++  P+TRP              KR RDCN+HPVFRGVRKRSWGK
Sbjct: 1   MAKPKN---SNPQNKTTPLPTTRPAG------------KRPRDCNKHPVFRGVRKRSWGK 60

Query: 61  WVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPASLMP 120
           WVSEIRQPRK SRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELA FLPRPASLMP
Sbjct: 61  WVSEIRQPRKNSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELADFLPRPASLMP 120

Query: 121 HDIQAAAAKAAAM----ATALPSPSEEEEELSEIVELPNIEDDFGTESLNEFKLVTESWE 180
            D+QAAAAKAAAM    + ALPS   EEEELSEIVELPNIEDDFGTESLNEFKLVTESWE
Sbjct: 121 QDVQAAAAKAAAMVHLNSAALPS---EEEELSEIVELPNIEDDFGTESLNEFKLVTESWE 180

Query: 181 WWEYVAMPLAAEFGGCSISDQLTAEDSLFPCSFYGALWD 216
           WWE VAMPLAAEFG    S+Q TAE+  +P SFYG LWD
Sbjct: 181 WWESVAMPLAAEFGYGYFSEQTTAEEGCYPSSFYGVLWD 201

[Close]

BLAST of Carg18773 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-38
Identity = 89/168 (52.98%), Postives = 110/168 (65.48%), Query Frame = 0


Query: 38  RKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIK 97
           +K  +D  +HPV+RGVRKR+WGKWVSEIR+PRKKSRIWLGTFP+PEMAARAHD AAL IK
Sbjct: 24  KKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIK 83

Query: 98  GDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAMATA--------------------- 157
           G SAILN+P+LA   PRP+SL P DIQ AA KAA M T+                     
Sbjct: 84  GASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLTFSSSQSSSSLE 143

Query: 158 --LPSPSEEEEELSEIVELPNIEDDFG--TESLNEFKLVTESWEWWEY 181
             + S +   EEL EIVELP++   +   T+  NEF + ++S + W Y
Sbjct: 144 SLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEF-IFSDSADLWPY 190

[Close]

BLAST of Carg18773 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 2.0e-38
Identity = 91/167 (54.49%), Postives = 105/167 (62.87%), Query Frame = 0


Query: 25  VSGAGPAQPDPPPRKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEM 84
           VS    A+      KR RD  +HPV+RGVR R+WGKWVSEIR+PRKKSRIWLGTFPTPEM
Sbjct: 26  VSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEM 85

Query: 85  AARAHDAAALCIKGDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAM----------- 144
           AARAHD AAL IKG +AILN+PELA   PRP SL P DIQ AA KAA M           
Sbjct: 86  AARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTS 145

Query: 145 -ATALPSPSE-------------EEEELSEIVELPNIEDDFGTESLN 167
            +++L S S              E EEL EIVELP++   +  +S N
Sbjct: 146 SSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSAN 192

[Close]

BLAST of Carg18773 vs. TAIR 10
Match: AT3G16280.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-37
Identity = 98/205 (47.80%), Postives = 122/205 (59.51%), Query Frame = 0


Query: 11  TPPPLSSSFPSTRPVSGAGPAQPDPPP-----RKRTRDCN--------RHPVFRGVRKRS 70
           +P   SS        +    ++ + PP     RKR RD +        +HPV+RGVR RS
Sbjct: 9   SPTSSSSDQSDATTTTSTHLSEEEAPPRNNNTRKRRRDSSSASSSSSMQHPVYRGVRMRS 68

Query: 71  WGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIKGDSAILNYPELASFLPRPAS 130
           WGKWVSEIRQPRKK+RIWLGTF T +MAARAHD AAL IKG SA+LN+PELAS  PRPAS
Sbjct: 69  WGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPAS 128

Query: 131 LMPHDIQAAAAKAAAM--------------------ATALPSPSEEEEELSEIVELPNIE 181
             PHDIQ AAA+AAAM                    ++ + + SE+EE L +IVELPNIE
Sbjct: 129 SSPHDIQTAAAEAAAMVVEEKLLEKDEAPEAPPSSESSYVAAESEDEERLEKIVELPNIE 188

[Close]

BLAST of Carg18773 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 5.0e-37
Identity = 94/176 (53.41%), Postives = 111/176 (63.07%), Query Frame = 0


Query: 38  RKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALCIK 97
           +KR R     P +RGVR R+WGKWVSEIR+PRKKSRIWLGTF TPEMAARAHDAAAL IK
Sbjct: 34  KKRVRS---DPGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDAAALTIK 93

Query: 98  GDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAM------------------------ 157
           G SA+LN+PELA++LPRPAS  P D+QAAAA AAAM                        
Sbjct: 94  GTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDPTTVIAPAETQ 153

Query: 158 ---------ATALPSPSEEE-----EELSEIVELPNIEDDFGTESLNEFKLVTESW 176
                     ++  SPS EE     EELSEIVELP++E  +  ESL+EF  V  ++
Sbjct: 154 LSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSY-DESLSEFVYVDSAY 205

[Close]

BLAST of Carg18773 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 6.7e-34
Identity = 74/115 (64.35%), Postives = 85/115 (73.91%), Query Frame = 0


Query: 34  DPPPRKRTRDCNRHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAA 93
           D    K  ++ N+ PV+RGVR RSWGKWVSEIR+PRKKSRIWLGTFPT EMA RAHD AA
Sbjct: 3   DSSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAA 62

Query: 94  LCIKGDSAILNYPELASFLPRPASLMPHDIQAAAAKAAAM---ATALPSPSEEEE 146
           + IKG SAILN+PEL+  LPRP SL P D++AAA KAA M    TA  S +E  E
Sbjct: 63  MSIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSE 117

The following BLAST results are available for this feature:

BLAST of Carg18773 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593479.1	3.1e-118	100.00	Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperm...	[more]
XP_023514993.1	8.0e-114	96.77	ethylene-responsive transcription factor ERF036-like [Cucurbita pepo subsp. pepo...	[more]
XP_022964007.1	1.4e-113	97.67	ethylene-responsive transcription factor TINY-like [Cucurbita moschata]	[more]
XP_023000389.1	1.3e-111	95.37	ethylene-responsive transcription factor TINY-like [Cucurbita maxima]	[more]
XP_022146662.1	3.1e-81	77.38	dehydration-responsive element-binding protein 3 [Momordica charantia]	[more]

BLAST of Carg18773 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39127	1.7e-37	52.98	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LYD3	2.8e-37	54.49	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LU18	1.8e-36	47.80	Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80654	7.0e-36	53.41	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9M080	9.4e-33	64.35	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Carg18773 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HGN7	6.6e-114	97.67	ethylene-responsive transcription factor TINY-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1KJR8	6.2e-112	95.37	ethylene-responsive transcription factor TINY-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1D072	1.5e-81	77.38	dehydration-responsive element-binding protein 3 OS=Momordica charantia OX=3673 ...	[more]
A0A5D3BW76	2.4e-79	74.43	Dehydration-responsive element-binding protein 3-like OS=Cucumis melo var. makuw...	[more]
A0A1S3CGW5	2.4e-79	74.43	dehydration-responsive element-binding protein 3-like OS=Cucumis melo OX=3656 GN...	[more]

BLAST of Carg18773 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25810.1	1.2e-38	52.98	Integrase-type DNA-binding superfamily protein	[more]
AT5G11590.1	2.0e-38	54.49	Integrase-type DNA-binding superfamily protein	[more]
AT3G16280.1	1.3e-37	47.80	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	5.0e-37	53.41	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	6.7e-34	64.35	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 72..88 score: 66.52 coord: 50..61 score: 65.61
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 49..112 e-value: 4.4E-34 score: 129.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 48..98 e-value: 6.0E-15 score: 55.2
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 49..106 score: 22.721256
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 50..108 e-value: 1.71248E-20 score: 79.2379
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 49..107 e-value: 5.1E-24 score: 86.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 29..159
None	No IPR available	PANTHER	PTHR31985:SF5	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042	coord: 29..159
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 49..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18773-RA	Carg18773-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity