Carg18712 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg18712
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-type E3 ubiquitin transferase
LocationCarg_Chr17: 7329457 .. 7331980 (+)
RNA-Seq ExpressionCarg18712
SyntenyCarg18712
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCTCCGCCTCCGCCGCCACCGCCGCCGCCGCCGAACGGCACACCTACTGGTGCCACGAGTGCGATATGAGCGTCACTTTGGTATCTCCTTCTTCGTCTTCTTCGTCTTCTTCGTCTTCTTCTTCTTCTTCTTCCTCTCTCCTTTGCCCTCACTGCCTCACTGACTTCCTTGAACACATGGATTTCACCATACCCACTTCCTCTTCTTCAATTTCCGACCACCCCATTTCCTCTTCTTCCCCTCCAGATTCCGATCCGTCATCCTTCGTCATCGTCGACCCTCTTCCGACCACCTCCGATGACAATTACCTCCTCAGCAGCCCCCAATTCCTCCGCCTTTTCCAGCAGCTCGCGGATTCATCCGATTCCGATTTCGCCCCATCTGTACCCTTCAACCCATTTACTCCGATCAAAGCCTCTGTCATGGCGATTCCCACGATTAAAGTCTCCTCCGCCATGCTCGAGGAAGACCCAATTCTAATTTGTGCTATTTGCAAGGATAAGTTCCTTCTTGAGGTGGAAGCCAAACAGCTCCCCTGTTCTCATCTCTACCATCCTGATTGCATTCTTCCATGGCTTTCTAATCATGATTCGTGCCCTCTTTGCCGCTATAAGCTTCCTTCTGATGAACCTTCGGATCATGTGAGATGTAGAGGAGCAACTATGGCCTTGTTGAGGGCTAGGGACCTGATGCCTCAAGAAGATAGTTATGGGTTGCGGACTACTCTTGAACATATGGCTAGAAGGCATAGTTCTATTTTCAGTGAAGGAGTTCAAGTGGATTCGTCTCAATCTCCCACTCAGTTGGGGGTTGCTGTGATGGGAAATGGGGAACAGACTGACAGTGTTGAGACTGTTTCTAGTGTGGCTACTGATGATGGGATTGTAATTGTCAATAGCAGTGGTGATGAAAATGGGTTTGTGGTAATGGATGGACCAATAAATGAGGATGCTGGCACCTTAGCTTAGGATATTGGAGTTTCTCCTTCGAGTTTTGTTTCTGCAAATTTGAGGTTTGTGTTCTTCCTTTTTACTGCTGTTCTTTATTTGTTCTTCATGTTCTTGTAGTTCATGTTGATGTGGGGGATTTCTAAACTGAATTTGGAATGAACAGAGCTTATATTTGATTTAAATTAAGAACAGATAGAGTGGCTTGTGATTGAGTAGAGTTCTTAGAGCTTTAGAACTTATTGACTGGCAGGTTTGATACTCTTTTCAGGATTTGTGATATCTGTTATTGGGCTTGTTACTTGAAACATCCATTTAGAGCATCTTGGTCATAGATAAGGATTGAAGCTTGATCCAAGCTTTCAGCTCTTAGTTCCTACTGATGCCTCTTTGGCTGATAGGCGGCGATGATGCATAAAGATGCAAATTTGAAACCATTTAACAAAGCCCCTGATGAACATTTCCATCTAGAGTGACTTCCCAAGTGCCTAAAAATGGGGTTTTAATGCTAGAAAAAGGGGTTTTGAGCACTTAAGACTAGGTTTTTTGAGCTGGATGAACAAATCTTAGATTAGATGCACGAAACAATAAAACATCTTTTCAATCCGGAAATCAAACAAAACATGGAGGAAATATGTTGTGAGATCCCACGTCGATTGGAGAGGAAAACAATTGTCAGCAAGGACGCTGGACCTCGAAAGGGGGTGGATTGTAAGATCCCACACCGGTTGGGAAGGAGAACGAAGCATTGTTTATAAGGATGTCGAAACCTCTCCCTAGCAGCGTGTTTTCAAAACTTTGAGGGCAAGCCTGAAACGAAAAGCTCAAAGAGGACAATATATGCTAGCAGTGGGCTTGAGTTGCAAGATCGGTGTGCTTTTAACTTTGTAGAATATTTCTGGCATGCCTTCTTTATATTTGATGATCATAGGATTATGTGTACTATCATAGCATATTTCTGTCTTATCTTAACTAAATAGTCCTTCTGGATAACCTTAATATACAAAACTTAGCATTGAAGTAATTGTGTATTGGCTCAACACATCTCCAAATCATGTCTAAAAGATCAAATACTTGTTATTCCTTTTCAAAACAAAAGCGTTCGTCGTTCTTTACCAGATTATAACCGGAATCTCTTTTTTGCATTGCATAACGTCTTTCGTGTCGTTTTTATGCAACTACTGAGCTCCTATGAACTGCTAGAGTAAGACTTCTGGTTCTACTGTCTGAAAAACAACCTCAAATATGACAAGCTTACTCGAAGAACAGGATCTGTTCTGTCCTTAAGTTCTAAAAAACCGCATTGTTTGTGTTCTGTTTACTTATTTGTAGTGTCGTTTATTTATGACTGCAGGTAATGTAATAGGATATGGTTGTTAGAGGAATCTTAGAGAGGTACCACAAGTAGGTGATTGATTGGAAGTGTAAATTGCTACAGAGAAGGACTCTGCTTCTTCTTCTTCTTGTTCGTTCATCTTTGGTAACAATGTCTCTGCATAATAAGAGTTGAACCTTATTTACAGTGTTATCAGCTGCCAATGTTTCCCAATTCTCTGTCTCAGTCATGGTTTGA

mRNA sequence

ATGTCCTCCGCCTCCGCCGCCACCGCCGCCGCCGCCGAACGGCACACCTACTGGTGCCACGAGTGCGATATGAGCGTCACTTTGGTATCTCCTTCTTCGTCTTCTTCGTCTTCTTCGTCTTCTTCTTCTTCTTCTTCCTCTCTCCTTTGCCCTCACTGCCTCACTGACTTCCTTGAACACATGGATTTCACCATACCCACTTCCTCTTCTTCAATTTCCGACCACCCCATTTCCTCTTCTTCCCCTCCAGATTCCGATCCGTCATCCTTCGTCATCGTCGACCCTCTTCCGACCACCTCCGATGACAATTACCTCCTCAGCAGCCCCCAATTCCTCCGCCTTTTCCAGCAGCTCGCGGATTCATCCGATTCCGATTTCGCCCCATCTGTACCCTTCAACCCATTTACTCCGATCAAAGCCTCTGTCATGGCGATTCCCACGATTAAAGTCTCCTCCGCCATGCTCGAGGAAGACCCAATTCTAATTTGTGCTATTTGCAAGGATAAGTTCCTTCTTGAGGTGGAAGCCAAACAGCTCCCCTGTTCTCATCTCTACCATCCTGATTGCATTCTTCCATGGCTTTCTAATCATGATTCGTGCCCTCTTTGCCGCTATAAGCTTCCTTCTGATGAACCTTCGGATCATGTGAGATGTAGAGGAGCAACTATGGCCTTGTTGAGGGCTAGGGACCTGATGCCTCAAGAAGATAGTTATGGGTTGCGGACTACTCTTGAACATATGGCTAGAAGGCATAGTTCTATTTTCAGTGAAGGAGTTCAAGTGGATTCGTCTCAATCTCCCACTCAGTTGGGGGTTGCTGTGATGGGAAATGGGGAACAGACTGACAGTGTTGAGACTGTTTCTAGTGTGGCTACTGATGATGGGATTGTAATTGTCAATAGCAGTGGTGATGAAAATGGGTTTGTGTGTCGTTTATTTATGACTGCAGTGTTATCAGCTGCCAATGTTTCCCAATTCTCTGTCTCAGTCATGGTTTGA

Coding sequence (CDS)

ATGTCCTCCGCCTCCGCCGCCACCGCCGCCGCCGCCGAACGGCACACCTACTGGTGCCACGAGTGCGATATGAGCGTCACTTTGGTATCTCCTTCTTCGTCTTCTTCGTCTTCTTCGTCTTCTTCTTCTTCTTCTTCCTCTCTCCTTTGCCCTCACTGCCTCACTGACTTCCTTGAACACATGGATTTCACCATACCCACTTCCTCTTCTTCAATTTCCGACCACCCCATTTCCTCTTCTTCCCCTCCAGATTCCGATCCGTCATCCTTCGTCATCGTCGACCCTCTTCCGACCACCTCCGATGACAATTACCTCCTCAGCAGCCCCCAATTCCTCCGCCTTTTCCAGCAGCTCGCGGATTCATCCGATTCCGATTTCGCCCCATCTGTACCCTTCAACCCATTTACTCCGATCAAAGCCTCTGTCATGGCGATTCCCACGATTAAAGTCTCCTCCGCCATGCTCGAGGAAGACCCAATTCTAATTTGTGCTATTTGCAAGGATAAGTTCCTTCTTGAGGTGGAAGCCAAACAGCTCCCCTGTTCTCATCTCTACCATCCTGATTGCATTCTTCCATGGCTTTCTAATCATGATTCGTGCCCTCTTTGCCGCTATAAGCTTCCTTCTGATGAACCTTCGGATCATGTGAGATGTAGAGGAGCAACTATGGCCTTGTTGAGGGCTAGGGACCTGATGCCTCAAGAAGATAGTTATGGGTTGCGGACTACTCTTGAACATATGGCTAGAAGGCATAGTTCTATTTTCAGTGAAGGAGTTCAAGTGGATTCGTCTCAATCTCCCACTCAGTTGGGGGTTGCTGTGATGGGAAATGGGGAACAGACTGACAGTGTTGAGACTGTTTCTAGTGTGGCTACTGATGATGGGATTGTAATTGTCAATAGCAGTGGTGATGAAAATGGGTTTGTGTGTCGTTTATTTATGACTGCAGTGTTATCAGCTGCCAATGTTTCCCAATTCTCTGTCTCAGTCATGGTTTGA

Protein sequence

MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEHMDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGLRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVNSSGDENGFVCRLFMTAVLSAANVSQFSVSVMV
Homology
[Close]
BLAST of Carg18712 vs. NCBI nr
Match: KAG7014205.1 (E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 635.6 bits (1638), Expect = 2.4e-178
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0 

Query: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH 60
           MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH
Sbjct: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH 60

Query: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120
           MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD
Sbjct: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120

Query: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLP 180
           SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLP
Sbjct: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLP 180

Query: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240
           CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL
Sbjct: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240

Query: 241 RTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300
           RTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN
Sbjct: 241 RTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300

Query: 301 SSGDENGFVCRLFMTAVLSAANVSQFSVSVMV 333
           SSGDENGFVCRLFMTAVLSAANVSQFSVSVMV
Sbjct: 301 SSGDENGFVCRLFMTAVLSAANVSQFSVSVMV 332

[Close]
BLAST of Carg18712 vs. NCBI nr
Match: XP_022991911.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima])

HSP 1 Score: 593.2 bits (1528), Expect = 1.4e-165
Identity = 307/309 (99.35%), Postives = 308/309 (99.68%), Query Frame = 0 

Query: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH 60
           MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH
Sbjct: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH 60

Query: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120
           MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD
Sbjct: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120

Query: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLP 180
           SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLL+VEAKQLP
Sbjct: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLDVEAKQLP 180

Query: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240
           CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL
Sbjct: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240

Query: 241 RTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300
           RTTLEHMARRHSSIFSEGVQVD SQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN
Sbjct: 241 RTTLEHMARRHSSIFSEGVQVDPSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300

Query: 301 SSGDENGFV 310
           SSGDENGFV
Sbjct: 301 SSGDENGFV 309

[Close]
BLAST of Carg18712 vs. NCBI nr
Match: XP_023549060.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 591.7 bits (1524), Expect = 4.1e-165
Identity = 309/310 (99.68%), Postives = 309/310 (99.68%), Query Frame = 0 

Query: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSP-SSSSSSSSSSSSSSSSLLCPHCLTDFLE 60
           MSSASAATAAAAERHTYWCHECDMSVTLVSP SSSSSSSSSSSSSSSSLLCPHCLTDFLE
Sbjct: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSSLLCPHCLTDFLE 60

Query: 61  HMDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA 120
           HMDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA
Sbjct: 61  HMDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA 120

Query: 121 DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL 180
           DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL
Sbjct: 121 DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL 180

Query: 181 PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG 240
           PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG
Sbjct: 181 PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG 240

Query: 241 LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV 300
           LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV
Sbjct: 241 LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV 300

Query: 301 NSSGDENGFV 310
           NSSGDENGFV
Sbjct: 301 NSSGDENGFV 310

[Close]
BLAST of Carg18712 vs. NCBI nr
Match: XP_022953211.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata])

HSP 1 Score: 588.6 bits (1516), Expect = 3.4e-164
Identity = 308/310 (99.35%), Postives = 308/310 (99.35%), Query Frame = 0 

Query: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSP-SSSSSSSSSSSSSSSSLLCPHCLTDFLE 60
           MSSASAATAAAAERHTYWCHECDMSVTLVSP SSSSSSSSSSSSSSSSLLCPHCLTDFLE
Sbjct: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSSLLCPHCLTDFLE 60

Query: 61  HMDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA 120
           HMDFTIPTSSSSISDHP SSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA
Sbjct: 61  HMDFTIPTSSSSISDHPGSSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA 120

Query: 121 DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL 180
           DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL
Sbjct: 121 DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL 180

Query: 181 PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG 240
           PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG
Sbjct: 181 PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG 240

Query: 241 LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV 300
           LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV
Sbjct: 241 LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV 300

Query: 301 NSSGDENGFV 310
           NSSGDENGFV
Sbjct: 301 NSSGDENGFV 310

[Close]
BLAST of Carg18712 vs. NCBI nr
Match: KAG6575655.1 (E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 572.0 bits (1473), Expect = 3.3e-159
Identity = 297/298 (99.66%), Postives = 297/298 (99.66%), Query Frame = 0 

Query: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH 60
           MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH
Sbjct: 148 MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH 207

Query: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120
           MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD
Sbjct: 208 MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 267

Query: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLP 180
           SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLP
Sbjct: 268 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLP 327

Query: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240
           CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL
Sbjct: 328 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 387

Query: 241 RTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVI 299
           RTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGI I
Sbjct: 388 RTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIDI 445

[Close]
BLAST of Carg18712 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.9e-17
Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 0 

Query: 109 PQFLRLFQQLADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKD 168
           P    L +QL+  +     P  P       K+S+ A+PTIK++   L+      C +CKD
Sbjct: 140 PGLEELIEQLSSGTHHRGPPPAP-------KSSIDALPTIKITQKHLKSSD-SHCPVCKD 199

Query: 169 KFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRYKLPS 210
           +F L+ EAKQ+PC H+YH DCI+PWL  H+SCP+CR +LPS
Sbjct: 200 EFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPS 232

[Close]
BLAST of Carg18712 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.6e-17
Identity = 43/101 (42.57%), Postives = 62/101 (61.39%), Query Frame = 0 

Query: 109 PQFLRLFQQLADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKD 168
           P    LF+QL+  +     P  P       ++++ A+PTIK++   L       C +CKD
Sbjct: 144 PGLEELFEQLSAGTTRRGPPPAP-------RSAIDALPTIKIAQRHLRSSD-SNCPVCKD 203

Query: 169 KFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRYKLPS 210
           +F L  EAKQ+PC+H+YH DCI+PWL  H+SCP+CR +LPS
Sbjct: 204 EFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS 236

[Close]
BLAST of Carg18712 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.6e-15
Identity = 79/285 (27.72%), Postives = 133/285 (46.67%), Query Frame = 0 

Query: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH 60
           ++S  +A AA      ++C++C+ +VT+            S SSS+   CP C   FLE 
Sbjct: 5   VNSTGSAAAAPEVDKMFFCYQCNQTVTI------------SISSSADPFCPICNQGFLE- 64

Query: 61  MDFTIPTSSSSISDHPISSSS-PPDSDPSSFVI-----------------------VDPL 120
            ++  P  + S++ +P SS S  P +DP S ++                       + P 
Sbjct: 65  -EYEDPNPNQSLNFNPNSSDSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQ 124

Query: 121 PTTSDDN----------YLLSSPQFLRL----FQQLADSSDSD-------------FAPS 180
             ++  N          +L +  Q LR     F+ + ++  SD             F P 
Sbjct: 125 ARSTQQNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPG 184

Query: 181 V-----------PFNPFTP--IKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEA 222
           +           P    TP   K+++ A+PT+KV+  ML+ + +  CA+C D+F    + 
Sbjct: 185 LEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSE-MNQCAVCMDEFEDGSDV 244

[Close]
BLAST of Carg18712 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.7e-15
Identity = 67/207 (32.37%), Postives = 102/207 (49.28%), Query Frame = 0 

Query: 28  LVSPSSSSSSSSSSSS-----------SSSSLLCPHCLTDFLEHMDFTIPTSSSSISDHP 87
           L+ PSSSS+++SSS+S           + S    P     F    +      SS      
Sbjct: 94  LLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFTFIQNHLNDLRSSGAQIEF 153

Query: 88  ISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLADSSDSDFAPSVPFNPFT 147
           +  ++P D           LP    D ++   P   +L QQLA++  + +         T
Sbjct: 154 VIQNNPSDQG-------FRLPANIGDYFI--GPGLEQLIQQLAENDPNRYG--------T 213

Query: 148 P--IKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLPCSHLYHPDCILPWL 207
           P   K+++ A+P + ++ + L  +    CA+C D F    EAKQ+PC HLYH DC+LPWL
Sbjct: 214 PPASKSAIEALPLVNITKSNLNSE-FNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWL 273

Query: 208 SNHDSCPLCRYKLPSDEPSDHVRCRGA 222
             H+SCP+CR++LP+D+P    R RGA
Sbjct: 274 ELHNSCPVCRHELPTDDPDYERRVRGA 282

[Close]
BLAST of Carg18712 vs. ExPASy Swiss-Prot
Match: O22283 (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 8.9e-14
Identity = 72/238 (30.25%), Postives = 124/238 (52.10%), Query Frame = 0 

Query: 25  SVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEHMDFTIPTSSSSISDHPI----SSS 84
           S T   P SSSSS+ S+S  + +   P  +T            + S+ S +P+     S+
Sbjct: 56  SPTRFPPPSSSSSTPSASMHADNSPTPTIVT-----------RTRSNRSPNPVIVLRGSA 115

Query: 85  SPPDS-------DPSSFVI---------VDPLPTTSDDNYLLSSPQFLRLFQQLA--DSS 144
           + P S       D S+F +         + PLP +  + +LL S  F RL  Q++  + +
Sbjct: 116 AAPSSDVVSEGLDRSAFQMYYDDGTDSGLRPLPPSMTE-FLLGS-GFDRLLDQISQIELN 175

Query: 145 DSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLPCS 204
            +    S    P +  K+++ A+P I++    L  D    CA+CK+ F+L+  A+++PC+
Sbjct: 176 TNRNLRSCEHPPAS--KSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCN 235

Query: 205 HLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 241
           H+YHPDCILPWL+  +SCP+CR++LP+++ +D     GA +  + A     ++ + GL
Sbjct: 236 HIYHPDCILPWLAIRNSCPVCRHELPAEDLTDGT---GAALTAVTATAEEEEDSAAGL 275

[Close]
BLAST of Carg18712 vs. ExPASy TrEMBL
Match: A0A6J1JS41 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111488408 PE=4 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 6.7e-166
Identity = 307/309 (99.35%), Postives = 308/309 (99.68%), Query Frame = 0 

Query: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH 60
           MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH
Sbjct: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH 60

Query: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120
           MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD
Sbjct: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120

Query: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLP 180
           SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLL+VEAKQLP
Sbjct: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLDVEAKQLP 180

Query: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240
           CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL
Sbjct: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240

Query: 241 RTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300
           RTTLEHMARRHSSIFSEGVQVD SQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN
Sbjct: 241 RTTLEHMARRHSSIFSEGVQVDPSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300

Query: 301 SSGDENGFV 310
           SSGDENGFV
Sbjct: 301 SSGDENGFV 309

[Close]
BLAST of Carg18712 vs. ExPASy TrEMBL
Match: A0A6J1GMD4 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111455823 PE=4 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 1.7e-164
Identity = 308/310 (99.35%), Postives = 308/310 (99.35%), Query Frame = 0 

Query: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSP-SSSSSSSSSSSSSSSSLLCPHCLTDFLE 60
           MSSASAATAAAAERHTYWCHECDMSVTLVSP SSSSSSSSSSSSSSSSLLCPHCLTDFLE
Sbjct: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSSLLCPHCLTDFLE 60

Query: 61  HMDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA 120
           HMDFTIPTSSSSISDHP SSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA
Sbjct: 61  HMDFTIPTSSSSISDHPGSSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA 120

Query: 121 DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL 180
           DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL
Sbjct: 121 DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL 180

Query: 181 PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG 240
           PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG
Sbjct: 181 PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG 240

Query: 241 LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV 300
           LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV
Sbjct: 241 LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV 300

Query: 301 NSSGDENGFV 310
           NSSGDENGFV
Sbjct: 301 NSSGDENGFV 310

[Close]
BLAST of Carg18712 vs. ExPASy TrEMBL
Match: A0A5D3CET0 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001260 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 9.5e-144
Identity = 272/309 (88.03%), Postives = 287/309 (92.88%), Query Frame = 0 

Query: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH 60
           MSSA+    AAAERHTYWCHECDMSVTLVSP  SSSSSSSSSSSSSSLLCPHCLTDFLEH
Sbjct: 1   MSSATITATAAAERHTYWCHECDMSVTLVSP--SSSSSSSSSSSSSSLLCPHCLTDFLEH 60

Query: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120
           MDFTIPTSSSSISDHP SSSSP DSDPSSFV+VDPLP TSDDNYLL+SPQFLRLFQ LAD
Sbjct: 61  MDFTIPTSSSSISDHPNSSSSPTDSDPSSFVVVDPLPITSDDNYLLNSPQFLRLFQHLAD 120

Query: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLP 180
           SS+SDF PSVPFNPFTPIKASVMAIPTIKV+SA+L+EDP+LICAICKD+FLLEVEAKQLP
Sbjct: 121 SSESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLP 180

Query: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240
           CSHLYHPDCILPWLSNHDSCPLCR+KLPSD+PSD VRCR  T ALLRARDLM QEDSYGL
Sbjct: 181 CSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCR--TSALLRARDLMHQEDSYGL 240

Query: 241 RTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300
           RTTLE MARRHSSI SEG+ VDS QSPTQ GVA+M +GEQTDSVETVSSVATDDGIVIVN
Sbjct: 241 RTTLELMARRHSSISSEGIHVDSFQSPTQFGVAMMRSGEQTDSVETVSSVATDDGIVIVN 300

Query: 301 SSGDENGFV 310
           S+GDENGFV
Sbjct: 301 SNGDENGFV 305

[Close]
BLAST of Carg18712 vs. ExPASy TrEMBL
Match: A0A1S3CE92 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499880 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.8e-143
Identity = 272/309 (88.03%), Postives = 287/309 (92.88%), Query Frame = 0 

Query: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH 60
           MSSA+   AAAAERHTYWCHECDMSVTLVSP  SSSSSSSSSSSSSSLLCPHCLTDFLEH
Sbjct: 1   MSSATITAAAAAERHTYWCHECDMSVTLVSP--SSSSSSSSSSSSSSLLCPHCLTDFLEH 60

Query: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120
           MDFTIPTSSSSISDHP SSSSP DSDPSSFV+VDPLP TSDDNYLL+SPQFLRLFQ LAD
Sbjct: 61  MDFTIPTSSSSISDHPNSSSSPTDSDPSSFVVVDPLPITSDDNYLLNSPQFLRLFQHLAD 120

Query: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLP 180
           SS+SDF PSVPFNPFTPIKASVMAIPTIKV+SA+L+ED +LICAICKD+FLLEVEAKQLP
Sbjct: 121 SSESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDQVLICAICKDQFLLEVEAKQLP 180

Query: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240
           CSHLYHPDCILPWLSNHDSCPLCR+KLPSD+PSD VRCR  T ALLRARDLM QEDSYGL
Sbjct: 181 CSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCR--TSALLRARDLMHQEDSYGL 240

Query: 241 RTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300
           RTTLE MARRHSSI SEG+ VDS QSPTQ GVA+M +GEQTDSVETVSSVATDDGIVIVN
Sbjct: 241 RTTLELMARRHSSISSEGINVDSFQSPTQFGVAMMRSGEQTDSVETVSSVATDDGIVIVN 300

Query: 301 SSGDENGFV 310
           S+GDENGFV
Sbjct: 301 SNGDENGFV 305

[Close]
BLAST of Carg18712 vs. ExPASy TrEMBL
Match: A0A0A0KBK3 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_7G429620 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.5e-141
Identity = 268/309 (86.73%), Postives = 286/309 (92.56%), Query Frame = 0 

Query: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH 60
           MSSA+    AAAERHTYWCHECDMSVTLVSP SSSSSSSSSSSSSSSL+CPHCLTDF+EH
Sbjct: 1   MSSATITATAAAERHTYWCHECDMSVTLVSP-SSSSSSSSSSSSSSSLVCPHCLTDFIEH 60

Query: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120
           MDFTIPTSSSSISD+P SSS P DSDPSSFV VDPLP TSDDNYLL+SPQFLRLFQ LAD
Sbjct: 61  MDFTIPTSSSSISDNPNSSSPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLAD 120

Query: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLP 180
           SS+SDF PSVPFNPFTPIKASVMAIPTIKV+SA+L+EDP+LICAICKD+FLLEVEAKQLP
Sbjct: 121 SSESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLP 180

Query: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240
           CSHLYHPDCILPWLSNHDSCPLCR+KLPSD+PSD VRCR  T ALLRARDLM QEDSYGL
Sbjct: 181 CSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCR--TSALLRARDLMHQEDSYGL 240

Query: 241 RTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300
           RTTLE MARRHSSI SEG+ VDS QSPTQ GVA+M +GEQTDSVETVSSVATDDGIVIVN
Sbjct: 241 RTTLELMARRHSSISSEGIHVDSFQSPTQFGVAMMESGEQTDSVETVSSVATDDGIVIVN 300

Query: 301 SSGDENGFV 310
           S+GDENGF+
Sbjct: 301 SNGDENGFL 306

[Close]
BLAST of Carg18712 vs. TAIR 10
Match: AT3G60080.1 (RING/U-box superfamily protein )

HSP 1 Score: 172.6 bits (436), Expect = 5.5e-43
Identity = 110/276 (39.86%), Postives = 158/276 (57.25%), Query Frame = 0 

Query: 1   MSSASAATAAA---AERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDF 60
           MSS++  T       ER TYWCHECDMS++L+       SSS S S SS LLCP C  DF
Sbjct: 1   MSSSTTTTTTVHGEPERRTYWCHECDMSLSLL-------SSSDSDSDSSPLLCPQCRVDF 60

Query: 61  LEHMDFTIPTSSSSISDHPISSSSPPD------SDPSSFVIVDPLPTTSDDNYLLSSPQF 120
           LE MD    +SSS++ D  I      D       D   +  VDP    SDDN+LL SP  
Sbjct: 61  LERMDH--DSSSSNLFDVTIGDFEEQDGENDDEDDEEDWCFVDP-AVNSDDNFLLDSPYL 120

Query: 121 LRLFQQLADSSDSDFAPSVPFNPFTPIKAS-VMAIPTIKVSSAML------EEDPILICA 180
            RL + LA  +    + S   +  + +K+S + +IPTI++SS++L      + D +L+CA
Sbjct: 121 HRLLRHLASDNSGSSSSSSSSSSSSLLKSSDIDSIPTIQISSSLLCSTDDSDPDSVLLCA 180

Query: 181 ICKDKFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRYKLPSDE------PSDHVRC 240
           +CK+ F++   A++LPCSH+YH DCI+PWLS+H+SCPLCR++LP+            +R 
Sbjct: 181 VCKEDFIIGESARRLPCSHIYHSDCIVPWLSDHNSCPLCRFELPTTAKVGIGGSEAEMRI 240

Query: 241 RGATMALLRARDLMPQEDSYGLRTTLEHMARRHSSI 255
           R + +A + A     ++D  G+R  L  +ARRH  +
Sbjct: 241 RLSDLATIAADGDDVEDDWLGIRNALRRLARRHEQM 266

[Close]
BLAST of Carg18712 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 2.1e-18
Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 0 

Query: 109 PQFLRLFQQLADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKD 168
           P    L +QL+  +     P  P       K+S+ A+PTIK++   L+      C +CKD
Sbjct: 140 PGLEELIEQLSSGTHHRGPPPAP-------KSSIDALPTIKITQKHLKSSD-SHCPVCKD 199

Query: 169 KFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRYKLPS 210
           +F L+ EAKQ+PC H+YH DCI+PWL  H+SCP+CR +LPS
Sbjct: 200 EFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPS 232

[Close]
BLAST of Carg18712 vs. TAIR 10
Match: AT3G56580.1 (RING/U-box superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 2.1e-18
Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 0 

Query: 109 PQFLRLFQQLADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKD 168
           P    L +QL+  +     P  P       K+S+ A+PTIK++   L+      C +CKD
Sbjct: 140 PGLEELIEQLSSGTHHRGPPPAP-------KSSIDALPTIKITQKHLKSSD-SHCPVCKD 199

Query: 169 KFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRYKLPS 210
           +F L+ EAKQ+PC H+YH DCI+PWL  H+SCP+CR +LPS
Sbjct: 200 EFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPS 232

[Close]
BLAST of Carg18712 vs. TAIR 10
Match: AT3G56580.3 (RING/U-box superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 2.1e-18
Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 0 

Query: 109 PQFLRLFQQLADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKD 168
           P    L +QL+  +     P  P       K+S+ A+PTIK++   L+      C +CKD
Sbjct: 140 PGLEELIEQLSSGTHHRGPPPAP-------KSSIDALPTIKITQKHLKSSD-SHCPVCKD 199

Query: 169 KFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRYKLPS 210
           +F L+ EAKQ+PC H+YH DCI+PWL  H+SCP+CR +LPS
Sbjct: 200 EFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPS 232

[Close]
BLAST of Carg18712 vs. TAIR 10
Match: AT2G44330.1 (RING/U-box superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 3.6e-18
Identity = 57/161 (35.40%), Postives = 84/161 (52.17%), Query Frame = 0 

Query: 58  LEHMDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQ 117
           LE  D+T P  +  +    + S+SPP             P  +  +Y  SS  F      
Sbjct: 10  LEMRDYTCPECNIGLRVLSLPSASPP-----------YCPLCNVASYFTSSTPFEVGPNP 69

Query: 118 LADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAML----EEDPILICAICKDKFLLE 177
             D  +S F          P++    ++PTIK+SS+ML     +D  L CAIC++ F++ 
Sbjct: 70  FEDDEESQF--------LDPME----SLPTIKISSSMLSSASSDDSALPCAICREDFVVG 129

Query: 178 VEAKQLPCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSD 215
             A++LPC+HLYH DCI+PWL++H+SCPLCR +LP     D
Sbjct: 130 ESARRLPCNHLYHNDCIIPWLTSHNSCPLCRVELPVASSED 147

The following BLAST results are available for this feature:
BLAST of Carg18712 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7014205.12.4e-178100.00E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022991911.11.4e-16599.35E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima][more]
XP_023549060.14.1e-16599.68E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo][more]
XP_022953211.13.4e-16499.35E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata][more]
KAG6575655.13.3e-15999.66E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Carg18712 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94AK42.9e-1743.56E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV... [more]
O221976.6e-1742.57Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH... [more]
Q8LPN71.6e-1527.72E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19... [more]
P0CH304.7e-1532.37E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV... [more]
O222838.9e-1430.25Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH... [more]
BLAST of Carg18712 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JS416.7e-16699.35RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111488408 P... [more]
A0A6J1GMD41.7e-16499.35RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111455823... [more]
A0A5D3CET09.5e-14488.03RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3CE922.8e-14388.03RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499880 PE=4 ... [more]
A0A0A0KBK31.5e-14186.73RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_7G429620 PE... [more]
BLAST of Carg18712 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G60080.15.5e-4339.86RING/U-box superfamily protein [more]
AT3G56580.22.1e-1843.56RING/U-box superfamily protein [more]
AT3G56580.12.1e-1843.56RING/U-box superfamily protein [more]
AT3G56580.32.1e-1843.56RING/U-box superfamily protein [more]
AT2G44330.13.6e-1835.40RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 163..203
e-value: 2.4E-6
score: 37.1
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 163..204
e-value: 4.6E-10
score: 39.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 163..204
score: 12.164712
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 135..210
e-value: 1.2E-17
score: 65.3
IPR039525E3 ubiquitin-protein ligase RNF126-like, zinc-ribbonPFAMPF14369zinc_ribbon_9coord: 16..61
e-value: 3.9E-8
score: 33.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..92
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 1..279
NoneNo IPR availablePANTHERPTHR15710:SF89FINGER PROTEIN, PUTATIVE-RELATEDcoord: 1..279
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 145..210

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18712-RACarg18712-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0005737 cytoplasm
molecular_function GO:0061630 ubiquitin protein ligase activity