Carg18684 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18684
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger A20 and AN1 domain-containing stress-associated protein 5
Location	Carg_Chr17: 7455034 .. 7455324 (-)
RNA-Seq Expression	Carg18684
Synteny	Carg18684

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACAGAGGACCGAGAAGGAGGAGACGGAGTTCAAAGTTCCAGAGACGATCACGCTTTGCGTTAACAACTGTGGCCTCACCGGGAATCCGGCGACGAATAATATGTGTCAGAAGTGCTTTAATGCTACCACGGCGGCAGCGGCGGCGGCGGCGGCGACTGCGTCTATGGCGATGAAGTTTTCTGGTGAGAAAAGTCCGAGATCTACTACGTCTCTTTCGCCAGAGAAATTTCGGTTCGTTTCAGAGTCTAGGAGGATTACAACGGCGGCGGATCGTTTTCTCAGATAA

mRNA sequence

ATGGCACAGAGGACCGAGAAGGAGGAGACGGAGTTCAAAGTTCCAGAGACGATCACGCTTTGCGTTAACAACTGTGGCCTCACCGGGAATCCGGCGACGAATAATATGTGTCAGAAGTGCTTTAATGCTACCACGGCGGCAGCGGCGGCGGCGGCGGCGACTGCGTCTATGGCGATGAAGTTTTCTGGTGAGAAAAGTCCGAGATCTACTACGTCTCTTTCGCCAGAGAAATTTCGGTTCGTTTCAGAGTCTAGGAGGATTACAACGGCGGCGGATCGTTTTCTCAGATAA

Coding sequence (CDS)

ATGGCACAGAGGACCGAGAAGGAGGAGACGGAGTTCAAAGTTCCAGAGACGATCACGCTTTGCGTTAACAACTGTGGCCTCACCGGGAATCCGGCGACGAATAATATGTGTCAGAAGTGCTTTAATGCTACCACGGCGGCAGCGGCGGCGGCGGCGGCGACTGCGTCTATGGCGATGAAGTTTTCTGGTGAGAAAAGTCCGAGATCTACTACGTCTCTTTCGCCAGAGAAATTTCGGTTCGTTTCAGAGTCTAGGAGGATTACAACGGCGGCGGATCGTTTTCTCAGATAA

Protein sequence

MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMKFSGEKSPRSTTSLSPEKFRFVSESRRITTAADRFLR

Homology

[Close]

BLAST of Carg18684 vs. NCBI nr
Match: KAG7014233.1 (Zinc finger A20 and AN1 domain-containing stress-associated protein 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.4 bits (459), Expect = 3.7e-42
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMK 60
          MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMK
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMK 60

Query: 61 FSGEKSPRSTTSLSPEKFRFVSESRRITTAADRFLR 97
          FSGEKSPRSTTSLSPEKFRFVSESRRITTAADRFLR
Sbjct: 61 FSGEKSPRSTTSLSPEKFRFVSESRRITTAADRFLR 96

[Close]

BLAST of Carg18684 vs. NCBI nr
Match: XP_022991927.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Cucurbita maxima])

HSP 1 Score: 173.7 bits (439), Expect = 7.6e-40
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMK 60
          MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMK
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMK 60

Query: 61 FSGEKSPRSTTSLSPEKFRFVSESRRITTAADR 94
          FSGEKSPRSTTS SPEKFRFVSESRRITTAADR
Sbjct: 61 FSGEKSPRSTTSRSPEKFRFVSESRRITTAADR 93

[Close]

BLAST of Carg18684 vs. NCBI nr
Match: KAG6575680.1 (Zinc finger A20 and AN1 domain-containing stress-associated protein 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 171.0 bits (432), Expect = 4.9e-39
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATT--AAAAAAAATASMA 60
          MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATT  AAAAAAAATASMA
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAAAATASMA 60

Query: 61 MKFSGEKSPRSTTSLSPEKFRFVSESRRITTAADR 94
          MKFSGEKSPRSTTSLSPEKFRFVSESRRITTAADR
Sbjct: 61 MKFSGEKSPRSTTSLSPEKFRFVSESRRITTAADR 95

[Close]

BLAST of Carg18684 vs. NCBI nr
Match: KAG6593313.1 (Zinc finger A20 and AN1 domain-containing stress-associated protein 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 165.6 bits (418), Expect = 2.1e-37
Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMK 60
          MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNA TAA+A A+ATASMAMK
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNAATAASATASATASMAMK 60

Query: 61 FSGEKSPRSTTSLSPEKFRFVSESRRITTAADR 94
          FSGEKSPRSTTS SPEKFRFV+ES+RITTAADR
Sbjct: 61 FSGEKSPRSTTSRSPEKFRFVAESKRITTAADR 93

[Close]

BLAST of Carg18684 vs. NCBI nr
Match: XP_022954077.1 (zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Cucurbita moschata])

HSP 1 Score: 164.5 bits (415), Expect = 4.6e-37
Identity = 89/93 (95.70%), Postives = 89/93 (95.70%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMK 60
          MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATT   AAAAATASMAMK
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATT---AAAAATASMAMK 60

Query: 61 FSGEKSPRSTTSLSPEKFRFVSESRRITTAADR 94
          FSGEKSPRSTTS SPEKFRFVSESRRITTAADR
Sbjct: 61 FSGEKSPRSTTSPSPEKFRFVSESRRITTAADR 90

[Close]

BLAST of Carg18684 vs. ExPASy Swiss-Prot
Match: Q9LHJ8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana OX=3702 GN=SAP5 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.0e-14
Identity = 43/67 (64.18%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETI-----TLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATA 60
          MAQRTEKEETEFKV ET+     TLC NNCG+T NPATNNMCQKCFNA+  +AAA    +
Sbjct: 1  MAQRTEKEETEFKVLETLTTTTTTLCTNNCGVTANPATNNMCQKCFNASLVSAAAGVVES 60

Query: 61 SMAMKFS 63
             +K S
Sbjct: 61 GSILKRS 67

[Close]

BLAST of Carg18684 vs. ExPASy Swiss-Prot
Match: Q84PD8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP11 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.6e-08
Identity = 32/58 (55.17%), Postives = 44/58 (75.86%), Query Frame = 0


Query: 1  MAQRTEK--EETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATAS 57
          MAQR +K  E TE + PE +TLC N+CG  GNPATNN+CQ CF A +A++++++A AS
Sbjct: 1  MAQREKKVEEPTELRAPE-MTLCANSCGFPGNPATNNLCQNCFLAASASSSSSSAAAS 57

[Close]

BLAST of Carg18684 vs. ExPASy Swiss-Prot
Match: A2Z2J6 (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=SAP1 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.8e-07
Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 1  MAQRTEK--EETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATAS 57
          MAQR +K  E TE + PE ITLC N+CG  GNPAT N+CQ CF A TA+ ++ ++ +S
Sbjct: 1  MAQRDKKDQEPTELRAPE-ITLCANSCGFPGNPATQNLCQNCFLAATASTSSPSSLSS 57

[Close]

BLAST of Carg18684 vs. ExPASy Swiss-Prot
Match: A3C039 (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP1 PE=2 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 1.8e-07
Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 1  MAQRTEK--EETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATAS 57
          MAQR +K  E TE + PE ITLC N+CG  GNPAT N+CQ CF A TA+ ++ ++ +S
Sbjct: 1  MAQRDKKDQEPTELRAPE-ITLCANSCGFPGNPATQNLCQNCFLAATASTSSPSSLSS 57

[Close]

BLAST of Carg18684 vs. ExPASy Swiss-Prot
Match: Q852K5 (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP6 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 4.1e-04
Identity = 28/72 (38.89%), Postives = 34/72 (47.22%), Query Frame = 0


Query: 4  RTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMKFSG 63
          + E EET    PE   LCVNNCG  G+  T NMC KC+  T  A   A            
Sbjct: 7  KKEAEETGVHTPEAPILCVNNCGFFGSRMTENMCSKCYRDTVKAKTVATVV--------- 66

Query: 64 EKSPRSTTSLSP 76
          EK P ++ S +P
Sbjct: 67 EKKPLASLSSTP 69

[Close]

BLAST of Carg18684 vs. ExPASy TrEMBL
Match: A0A6J1JN99 (zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111488423 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.7e-40
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMK 60
          MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMK
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMK 60

Query: 61 FSGEKSPRSTTSLSPEKFRFVSESRRITTAADR 94
          FSGEKSPRSTTS SPEKFRFVSESRRITTAADR
Sbjct: 61 FSGEKSPRSTTSRSPEKFRFVSESRRITTAADR 93

[Close]

BLAST of Carg18684 vs. ExPASy TrEMBL
Match: A0A6J1GQ09 (zinc finger A20 and AN1 domain-containing stress-associated protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111456450 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.2e-37
Identity = 89/93 (95.70%), Postives = 89/93 (95.70%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMK 60
          MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATT   AAAAATASMAMK
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATT---AAAAATASMAMK 60

Query: 61 FSGEKSPRSTTSLSPEKFRFVSESRRITTAADR 94
          FSGEKSPRSTTS SPEKFRFVSESRRITTAADR
Sbjct: 61 FSGEKSPRSTTSPSPEKFRFVSESRRITTAADR 90

[Close]

BLAST of Carg18684 vs. ExPASy TrEMBL
Match: A0A6J1L093 (zinc finger A20 and AN1 domain-containing stress-associated protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111497900 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 9.4e-36
Identity = 85/93 (91.40%), Postives = 87/93 (93.55%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMK 60
          MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNA T    AA+ATASMAMK
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNAAT----AASATASMAMK 60

Query: 61 FSGEKSPRSTTSLSPEKFRFVSESRRITTAADR 94
          FSGEKSPRSTTS SPEKFRFV+ESRRITTAADR
Sbjct: 61 FSGEKSPRSTTSRSPEKFRFVAESRRITTAADR 89

[Close]

BLAST of Carg18684 vs. ExPASy TrEMBL
Match: A0A6J1H9N3 (zinc finger A20 and AN1 domain-containing stress-associated protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111460881 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.7e-35
Identity = 83/93 (89.25%), Postives = 87/93 (93.55%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMK 60
          MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNA T    AA+ATASMAMK
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNAAT----AASATASMAMK 60

Query: 61 FSGEKSPRSTTSLSPEKFRFVSESRRITTAADR 94
          FSGEKSPRSTTS SPEKFRF++ES+RITTAADR
Sbjct: 61 FSGEKSPRSTTSRSPEKFRFIAESKRITTAADR 89

[Close]

BLAST of Carg18684 vs. ExPASy TrEMBL
Match: A0A0A0KBH5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428830 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.2e-34
Identity = 82/93 (88.17%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATASMAMK 60
          MAQRTEKEETEFKVPETITLCVNNCGLTGNP TNNMCQKCFNATT       ATASMA+K
Sbjct: 1  MAQRTEKEETEFKVPETITLCVNNCGLTGNPTTNNMCQKCFNATT-------ATASMAIK 60

Query: 61 FSGEKSPRSTTSLSPEKFRFVSESRRITTAADR 94
          FSGEKSPRSTTS SPEKFRFVSESRRI TAADR
Sbjct: 61 FSGEKSPRSTTSRSPEKFRFVSESRRIITAADR 86

[Close]

BLAST of Carg18684 vs. TAIR 10
Match: AT3G12630.1 (A20/AN1-like zinc finger family protein )

HSP 1 Score: 79.7 bits (195), Expect = 1.4e-15
Identity = 43/67 (64.18%), Postives = 49/67 (73.13%), Query Frame = 0


Query: 1  MAQRTEKEETEFKVPETI-----TLCVNNCGLTGNPATNNMCQKCFNATTAAAAAAAATA 60
          MAQRTEKEETEFKV ET+     TLC NNCG+T NPATNNMCQKCFNA+  +AAA    +
Sbjct: 1  MAQRTEKEETEFKVLETLTTTTTTLCTNNCGVTANPATNNMCQKCFNASLVSAAAGVVES 60

Query: 61 SMAMKFS 63
             +K S
Sbjct: 61 GSILKRS 67

The following BLAST results are available for this feature:

BLAST of Carg18684 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014233.1	3.7e-42	100.00	Zinc finger A20 and AN1 domain-containing stress-associated protein 5, partial [...	[more]
XP_022991927.1	7.6e-40	98.92	zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Cucurbita...	[more]
KAG6575680.1	4.9e-39	97.89	Zinc finger A20 and AN1 domain-containing stress-associated protein 5, partial [...	[more]
KAG6593313.1	2.1e-37	92.47	Zinc finger A20 and AN1 domain-containing stress-associated protein 5, partial [...	[more]
XP_022954077.1	4.6e-37	95.70	zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Cucu...	[more]

BLAST of Carg18684 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHJ8	2.0e-14	64.18	Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabido...	[more]
Q84PD8	1.6e-08	55.17	Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza ...	[more]
A2Z2J6	1.8e-07	53.45	Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza s...	[more]
A3C039	1.8e-07	53.45	Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza s...	[more]
Q852K5	4.1e-04	38.89	Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza s...	[more]

BLAST of Carg18684 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JN99	3.7e-40	98.92	zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Cucurbi...	[more]
A0A6J1GQ09	2.2e-37	95.70	zinc finger A20 and AN1 domain-containing stress-associated protein 5-like OS=Cu...	[more]
A0A6J1L093	9.4e-36	91.40	zinc finger A20 and AN1 domain-containing stress-associated protein 5-like OS=Cu...	[more]
A0A6J1H9N3	2.7e-35	89.25	zinc finger A20 and AN1 domain-containing stress-associated protein 5-like OS=Cu...	[more]
A0A0A0KBH5	5.2e-34	88.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428830 PE=4 SV=1	[more]

BLAST of Carg18684 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12630.1	1.4e-15	64.18	A20/AN1-like zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002653	Zinc finger, A20-type	SMART	SM00259	A20_3	coord: 18..42 e-value: 2.8E-5 score: 33.5
IPR002653	Zinc finger, A20-type	PFAM	PF01754	zf-A20	coord: 20..42 e-value: 4.0E-10 score: 39.4
IPR002653	Zinc finger, A20-type	PROSITE	PS51036	ZF_A20	coord: 15..49 score: 8.846684
None	No IPR available	GENE3D	1.20.5.4770		coord: 1..75 e-value: 1.2E-13 score: 52.4
None	No IPR available	PANTHER	PTHR10634:SF22	ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 5	coord: 1..72
None	No IPR available	PANTHER	PTHR10634	AN1-TYPE ZINC FINGER PROTEIN	coord: 1..72
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 20..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18684-RA	Carg18684-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding