Carg18670 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18670
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pectin lyase-like superfamily protein
Location	Carg_Chr17: 7522992 .. 7526436 (+)
RNA-Seq Expression	Carg18670
Synteny	Carg18670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTCGGGGATTGCTCGGTCGTCGTTGTCGTCTTCTTCTTCTTCTTCCCTTTCTCGTCGCCATTGTCGTTTTTGGGTTTTTCTCGGTCTGCTCTAGCTCGTACGCTGATGTTGATCCTCCCCCTTTGATTATCCGTGGTGATGGGAAGGATCGTGATCACCAGCATTATGGGTACTCTTCCAAATTCTCGAGCATGTTGACAACGAGGTTGGAGAAAATGGCATCGTCGCCCGTGGCATCGTCCGAGATATTTAATGTGGATGATTATGGGGCAATGGGCGACGGAGAGGACGATAGCGAGGTGGGTTTTTTTTTCTTTTTTTTTTTTTATGAATAAGATTAATGAGTTTGAATTAAAAGTAGTAGGAGTCAAATGTTACGTATTTAATTATTTCAGGCGTTTAAAGAAGCTTGGAAGGAAGCTTGTTCGTCCACAAATGCCATCTTTTTGGTTCCTATCGATAGAACTTATCATCTTAAGCCAATCACTTTCTCCGGCCCTTGTAACTCTCCTTTTGCATTTAAGGTATATTTATGAGTATTAATATAATCCCTAAATTTTGTTAATTTTACAATAATTTTAAAATATTATTAAGATCCAATCATATTCCTTATTTCTTATCTATGTAATTAAAGATTTCATTATTTATAAATAATTTCTTTTAGTAATAACGAATGAGACAAGATAACTAATCAGTTAATAAATTATAACATATTTTATTAGAGTTAGTTATTTTTTTTTTTTTTTTTTTTTAAGGAAGAAATTTCTATTTTCCTTTCTTATATGATTTATTTGAATTTATGTAATTATATTGAATTAAATTAATAATATTTCAAACATTAAAATCTTTGTAATAAAGTTATCATAAATTCCTTTTGTATTTATTAATATATTTATTTAATATAGTTAACGGCTTTTTAAAAATTTCTTCAATTGCATTTCAACCCTCCATTTTATTACTATTATTATTATTAGGAATTTATATTTCGGTTTAACAAATATTTATTATTTAAATTTTGACTTTATCTTCTTTCATATAATATCACAATTATTTAGGAAACTGAAATATTCTGGTATTTTTGGAAAAATGAAGATTAAGTTTTTTTTAATTAAAAATGAATTAATATTATTATTTTCTCTTAATAATTACTTCTTTTTTTTTAATTGGAAGATTGAAGGGACAATAAAAGCCTCCCCACATATATCAGATTACGAGAAAGACAGAAGGCATTGGATTATATTTGAAAATCTATCAGAATTTACCGTGGAAGGTAAAGGCACCATTAATGGAAATGGAAGAAAATGGTGGTTAAATTCATGCAAAGTCAACAAAACTCTAGTGAGTTTCTCAATTTTACCTCAGTAAATTTTCAATCACAACTCATTTTGTGTGTTAATGGATTTCTTCTTCCATTTTTCTCGTTCTTGCAGCCCTGCAAGGAAGCTCCAACAGTAAGGCTTGTGTGATTTTGAAACTTCCGAAGAAATAAGTGTTAGACGGTTTATAACACAAAAAAATAATAATAATACTCTCTCCATTGGTATGAGGTCTTTTGGGGAAGCCCAAAGCGAGCTTATGCTCAAAGTGGAGCATATCATACCATTGTGGAGAGTCATGTTCGTGTAACAATAAGAACATCTCCATTAACTTTGAAGCTAATTTCTCTCTCTCTCTCTCTCTCTAGGCTGTTACTTTCTATCAATGTACCCAATCTGAGAGTGGAAGGGCTGAGGTTCAGAAATGCACAAAAGATGCATCTTTCCTTTCAGAAATGCAGCAATGTCAAAGCTCTAAATCTATGGATTTATGCACCAGGAAACAGCCCCAACACTGATGGCATTCATGTCACAGCCACACAAATCATTCTCATCCAAAACTGTCTTATAATGACTGGTAGGGTACTCCTATACCTAAAAGCTTCATAACTTTTACTTCATAACTTTATCTTTGTACTCTTTTTTTCAAGGTGATGACTGTATTTCGATCGTAAGTGGGTCGAAAAATGTTCGAGCAAAGGGCATAACTTGTGGACCGGGCCATGGGATCAGGTTTCCATAATGCAGCTCTACAACTTGGCTAATTTGATTCATTGGGGTCTGTTTTATTGACTGTTTTTTTTCTGTTTCTGGTTTGTTTTGCAGTATTGGAAGCTTGGGAGCTGGAAAATCAGAAGCTGAGGTTTCTAATGTGGTGGTTGATACAGCAAAGTTTACAGGAACATCAAATGGAGTGAGAATCAAAACTTGGCAGGTATACAAAGAAAACTTGTTTAGAACAGTAAAGATCGGTTGTTTTGAGTTGAAAATTGAAGCTATATTTCACTTTGTTAAGACTCAAAAATCAGAAAATGATGGAAGTTTACTGGATGCAAAAGCAACAGTGTTCGTGCCTGCTGATTTTGACACCAGAACTTGACCTGCACATTACTTAATCCTCTACTTTTTGACCAACTCAAAACCTGTATGAGTATAGGTATCATGTGCTTTTCAAACCTACCAAACAATTCTCAGTTTTTTTTCACAAGTCAATGGCATTCAGGAGGGAGGGGGAAGTTTGGTTTGCTTTCTCCCCTGCTAGTCAGCTAAGAATTGGGCTTTGAACAGATTTCAAACATAGTGAACCAGTAAGATGAACATATTATGGAAGTTTCTGCACAAGAGAAAGATAAACAGCAAAAGAAATCAATGGGCCATGCCTTGCTACTCTTTCTTTGATCTTCTTTATTTATTTCAAGTCTTGTTTTATTTTATTGGGTTTTTAACTTCTGCATCTTGTTTGCGTTGGTTCTTTAGGTTCAAGTTTGGTCTACAAACTTTGTGCAAAATAATTGTTTTCTTCTTTTATTAGAAGTCAAATAAATAACAAAATTGATAACTTCAAGACAATTTCAACTTAGGAAACACAACTTAAGAGTTAGATTTAATGTTTTGATTTGTCTTAAACTATCTATCAAAGATCTCTTTAGTTCTAATCCAACAGTTTGGTGTACAGGGAGGCAAAGGGTATGCAGAAAACATAATATTCCAGAACATTGTGATGGACAATGTGACCAACCCAATAATCATAGATCAAAACTACTGTGATCAGAAAGAACCATGTACACAACAGGTAAACACTTCAAAAACCCAAATCAGCACAGCCTACAGCTTCAATATTCACGAAAAATTTCTGCTAAGCATTTTATCAAACACGTAACAGGCAGAAGCAGTACAAGTGAGTAATGTAATGTACCAGAACATCAGAGGCACAAGCGGTTCGGAAGTGGCTGTGAAATTCGATTGCAGCAAAAGCTTCCCATGTCAGGAGATTCTTCTACAAGACATCGATCTTGTCCACAGAGATAAAGCAGACGATAAACCCACCCAAGCCGAAGCTTCCTGTAAAAATGCCAGGTTGAAGAATAGAGGAAGGGTTTCTCCACAGTGCCCTGGACGACGATGA

mRNA sequence

ATGTGTCGGGGATTGCTCGGTCGTCGTTGTCGTCTTCTTCTTCTTCTTCCCTTTCTCGTCGCCATTGTCGTTTTTGGGTTTTTCTCGGTCTGCTCTAGCTCGTACGCTGATGTTGATCCTCCCCCTTTGATTATCCGTGGTGATGGGAAGGATCGTGATCACCAGCATTATGGGTACTCTTCCAAATTCTCGAGCATGTTGACAACGAGGTTGGAGAAAATGGCATCGTCGCCCGTGGCATCGTCCGAGATATTTAATGTGGATGATTATGGGGCAATGGGCGACGGAGAGGACGATAGCGAGGCGTTTAAAGAAGCTTGGAAGGAAGCTTGTTCGTCCACAAATGCCATCTTTTTGGTTCCTATCGATAGAACTTATCATCTTAAGCCAATCACTTTCTCCGGCCCTTGTAACTCTCCTTTTGCATTTAAGCCCTGCAAGGAAGCTCCAACAGTCTTTTGGGGAAGCCCAAAGCGAGCTTATGCTCAAAGTGGAGCATATCATACCATTGTGGAGAGTCATAAATGCAGCAATGTCAAAGCTCTAAATCTATGGATTTATGCACCAGGAAACAGCCCCAACACTGATGGCATTCATGTCACAGCCACACAAATCATTCTCATCCAAAACTGTCTTATAATGACTGGTGATGACTGTATTTCGATCGTAAGTGGGTCGAAAAATGTTCGAGCAAAGGGCATAACTTGTGGACCGGGCCATGGGATCAGTATTGGAAGCTTGGGAGCTGGAAAATCAGAAGCTGAGGTTTCTAATGTGGTGGTTGATACAGCAAAGTTTACAGGAACATCAAATGGAGTGAGAATCAAAACTTGGCAGGGAGGCAAAGGGTATGCAGAAAACATAATATTCCAGAACATTGTGATGGACAATGTGACCAACCCAATAATCATAGATCAAAACTACTGTGATCAGAAAGAACCATGTACACAACAGGCAGAAGCAGTACAAGTGAGTAATGTAATGTACCAGAACATCAGAGGCACAAGCGGTTCGGAAGTGGCTGTGAAATTCGATTGCAGCAAAAGCTTCCCATGTCAGGAGATTCTTCTACAAGACATCGATCTTGTCCACAGAGATAAAGCAGACGATAAACCCACCCAAGCCGAAGCTTCCTGTAAAAATGCCAGGTTGAAGAATAGAGGAAGGGTTTCTCCACAGTGCCCTGGACGACGATGA

Coding sequence (CDS)

ATGTGTCGGGGATTGCTCGGTCGTCGTTGTCGTCTTCTTCTTCTTCTTCCCTTTCTCGTCGCCATTGTCGTTTTTGGGTTTTTCTCGGTCTGCTCTAGCTCGTACGCTGATGTTGATCCTCCCCCTTTGATTATCCGTGGTGATGGGAAGGATCGTGATCACCAGCATTATGGGTACTCTTCCAAATTCTCGAGCATGTTGACAACGAGGTTGGAGAAAATGGCATCGTCGCCCGTGGCATCGTCCGAGATATTTAATGTGGATGATTATGGGGCAATGGGCGACGGAGAGGACGATAGCGAGGCGTTTAAAGAAGCTTGGAAGGAAGCTTGTTCGTCCACAAATGCCATCTTTTTGGTTCCTATCGATAGAACTTATCATCTTAAGCCAATCACTTTCTCCGGCCCTTGTAACTCTCCTTTTGCATTTAAGCCCTGCAAGGAAGCTCCAACAGTCTTTTGGGGAAGCCCAAAGCGAGCTTATGCTCAAAGTGGAGCATATCATACCATTGTGGAGAGTCATAAATGCAGCAATGTCAAAGCTCTAAATCTATGGATTTATGCACCAGGAAACAGCCCCAACACTGATGGCATTCATGTCACAGCCACACAAATCATTCTCATCCAAAACTGTCTTATAATGACTGGTGATGACTGTATTTCGATCGTAAGTGGGTCGAAAAATGTTCGAGCAAAGGGCATAACTTGTGGACCGGGCCATGGGATCAGTATTGGAAGCTTGGGAGCTGGAAAATCAGAAGCTGAGGTTTCTAATGTGGTGGTTGATACAGCAAAGTTTACAGGAACATCAAATGGAGTGAGAATCAAAACTTGGCAGGGAGGCAAAGGGTATGCAGAAAACATAATATTCCAGAACATTGTGATGGACAATGTGACCAACCCAATAATCATAGATCAAAACTACTGTGATCAGAAAGAACCATGTACACAACAGGCAGAAGCAGTACAAGTGAGTAATGTAATGTACCAGAACATCAGAGGCACAAGCGGTTCGGAAGTGGCTGTGAAATTCGATTGCAGCAAAAGCTTCCCATGTCAGGAGATTCTTCTACAAGACATCGATCTTGTCCACAGAGATAAAGCAGACGATAAACCCACCCAAGCCGAAGCTTCCTGTAAAAATGCCAGGTTGAAGAATAGAGGAAGGGTTTCTCCACAGTGCCCTGGACGACGATGA

Protein sequence

MCRGLLGRRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGDGKDRDHQHYGYSSKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLVPIDRTYHLKPITFSGPCNSPFAFKPCKEAPTVFWGSPKRAYAQSGAYHTIVESHKCSNVKALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPGHGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVTNPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQDIDLVHRDKADDKPTQAEASCKNARLKNRGRVSPQCPGRR

Homology

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BLAST of Carg18670 vs. NCBI nr
Match: KAG7014247.1 (hypothetical protein SDJN02_24422, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 811.2 bits (2094), Expect = 3.9e-231
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0


Query: 1   MCRGLLGRRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGDGKDRDHQHYGYS 60
           MCRGLLGRRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGDGKDRDHQHYGYS
Sbjct: 1   MCRGLLGRRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGDGKDRDHQHYGYS 60

Query: 61  SKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLV 120
           SKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLV
Sbjct: 61  SKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLV 120

Query: 121 PIDRTYHLKPITFSGPCNSPFAFKPCKEAPTVFWGSPKRAYAQSGAYHTIVESHKCSNVK 180
           PIDRTYHLKPITFSGPCNSPFAFKPCKEAPTVFWGSPKRAYAQSGAYHTIVESHKCSNVK
Sbjct: 121 PIDRTYHLKPITFSGPCNSPFAFKPCKEAPTVFWGSPKRAYAQSGAYHTIVESHKCSNVK 180

Query: 181 ALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPGH 240
           ALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPGH
Sbjct: 181 ALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPGH 240

Query: 241 GISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVTN 300
           GISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVTN
Sbjct: 241 GISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVTN 300

Query: 301 PIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQDI 360
           PIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQDI
Sbjct: 301 PIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQDI 360

Query: 361 DLVHRDKADDKPTQAEASCKNARLKNRGRVSPQCPGRR 399
           DLVHRDKADDKPTQAEASCKNARLKNRGRVSPQCPGRR
Sbjct: 361 DLVHRDKADDKPTQAEASCKNARLKNRGRVSPQCPGRR 398

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BLAST of Carg18670 vs. NCBI nr
Match: XP_022953263.1 (polygalacturonase QRT2-like [Cucurbita moschata])

HSP 1 Score: 723.8 bits (1867), Expect = 8.2e-205
Identity = 376/459 (81.92%), Postives = 381/459 (83.01%), Query Frame = 0


Query: 1   MCRGLLGRRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGDGKDRDHQHYGYS 60
           MCRGLLGRRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGDGKDRDHQHYGYS
Sbjct: 1   MCRGLLGRRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGDGKDRDHQHYGYS 60

Query: 61  SKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLV 120
           SKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLV
Sbjct: 61  SKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLV 120

Query: 121 PIDRTYHLKPITFSGPCNSPFAFK------------------------------------ 180
           PIDRTYHLKPITFSGPCNSPFAFK                                    
Sbjct: 121 PIDRTYHLKPITFSGPCNSPFAFKIEGTIKASPHISDYEKDRRHWIIFENLSEFTVEGKG 180

Query: 181 --------------------PCKEAPT-VFWGSPKRAYAQSGAYHTIVESH----KCSNV 240
                               PCKEAPT V +        +   +    + H    KCSNV
Sbjct: 181 TINGNGRKWWLNSCKVNKTLPCKEAPTAVTFYQCTNLRVEGLRFRNAQKMHLSFQKCSNV 240

Query: 241 KALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPG 300
           KALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPG
Sbjct: 241 KALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPG 300

Query: 301 HGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVT 360
           HGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVT
Sbjct: 301 HGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVT 360

Query: 361 NPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQD 399
           NPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCS+SFPCQEILLQD
Sbjct: 361 NPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSESFPCQEILLQD 420

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BLAST of Carg18670 vs. NCBI nr
Match: XP_023547692.1 (polygalacturonase QRT2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 699.5 bits (1804), Expect = 1.7e-197
Identity = 365/459 (79.52%), Postives = 371/459 (80.83%), Query Frame = 0


Query: 1   MCRGLLGRRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGDGKDRDHQHYGYS 60
           MCRGLLGRRCR    LPFL+AIVVF FFS CSSSYADVDPPPLI RGDGKDRDHQHYGYS
Sbjct: 1   MCRGLLGRRCR----LPFLIAIVVFEFFSACSSSYADVDPPPLINRGDGKDRDHQHYGYS 60

Query: 61  SKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLV 120
           SKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDS+AFKEAWKEACSSTNAIFLV
Sbjct: 61  SKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSQAFKEAWKEACSSTNAIFLV 120

Query: 121 PIDRTYHLKPITFSGPCNSPFAFK------------------------------------ 180
           P DRTYHLKPITFSGPCNSPF FK                                    
Sbjct: 121 PNDRTYHLKPITFSGPCNSPFVFKIEGTIKASPHISDYEKDRRHWIVFENLAEFTVEGKG 180

Query: 181 --------------------PCKEAPT-VFWGSPKRAYAQSGAYHTIVESH----KCSNV 240
                               PCKEAPT V +        +   +    + H    KCSNV
Sbjct: 181 TINGNGRKWWLNSCKVNKTLPCKEAPTAVTFYQCTNLRVEGLRFRNAQKMHLSFQKCSNV 240

Query: 241 KALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPG 300
           KALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPG
Sbjct: 241 KALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPG 300

Query: 301 HGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVT 360
           HGISIGSLGAGKSEAEVSNVVVDTAKF GTSNGVRIKTWQGGKGYAENIIFQNIVMDNVT
Sbjct: 301 HGISIGSLGAGKSEAEVSNVVVDTAKFKGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVT 360

Query: 361 NPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQD 399
           NPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQD
Sbjct: 361 NPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQD 420

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BLAST of Carg18670 vs. NCBI nr
Match: XP_022991888.1 (polygalacturonase QRT2-like [Cucurbita maxima])

HSP 1 Score: 683.7 bits (1763), Expect = 9.4e-193
Identity = 361/461 (78.31%), Postives = 371/461 (80.48%), Query Frame = 0


Query: 1   MCRGLLG--RRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGDGKDRDHQHYG 60
           MCRGLLG   RCRLLLLLPFL+AIVVF FFS+CSSSYADVDPP LI RGDGKDRD Q++G
Sbjct: 1   MCRGLLGCRCRCRLLLLLPFLIAIVVFEFFSLCSSSYADVDPPLLINRGDGKDRDQQYHG 60

Query: 61  YSSKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIF 120
           YSSKFSSMLTTRLEKMA SPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIF
Sbjct: 61  YSSKFSSMLTTRLEKMAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIF 120

Query: 121 LVPIDRTYHLKPITFSGPCNSPFAFK---------------------------------- 180
           LVP DRTYHLKPITFSGPCNSPFAFK                                  
Sbjct: 121 LVPNDRTYHLKPITFSGPCNSPFAFKIEGTIKASPHISDYEKDRRHWIIFENLTEFTVEG 180

Query: 181 ----------------------PCKEAPT-VFWGSPKRAYAQSGAYHTIVESH----KCS 240
                                 PCKEAPT V +        +   +    + H    KCS
Sbjct: 181 KGIINGNGRKWWLNSCKVNKTLPCKEAPTAVTFYQCTNLRVEGLRFRNAQKMHLSFQKCS 240

Query: 241 NVKALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCG 300
           NVKALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCG
Sbjct: 241 NVKALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCG 300

Query: 301 PGHGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDN 360
           PGHGISIGSLGAGKSEAEVS+VVVDTAKFTGTSNGVRIKTWQGGKGYA+NIIFQNIVMDN
Sbjct: 301 PGHGISIGSLGAGKSEAEVSDVVVDTAKFTGTSNGVRIKTWQGGKGYAQNIIFQNIVMDN 360

Query: 361 VTNPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILL 399
           VTNPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPC EILL
Sbjct: 361 VTNPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCLEILL 420

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BLAST of Carg18670 vs. NCBI nr
Match: XP_038899303.1 (polygalacturonase QRT2-like [Benincasa hispida])

HSP 1 Score: 609.0 bits (1569), Expect = 2.9e-170
Identity = 321/458 (70.09%), Postives = 341/458 (74.45%), Query Frame = 0


Query: 1   MCRGLLGRRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGDGKDRDHQHYGYS 60
           MC  L   RC  LLLL FL+ + +  FFS CS SYAD+DPPP I  GD +D D  +Y YS
Sbjct: 2   MCCQLFSHRC-CLLLLSFLITMAISEFFSTCSGSYADIDPPPSISSGDKEDHDQHYYEYS 61

Query: 61  SKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLV 120
           S+FSSML TRLEKMA SPVASSEIFNVDDYGAMGDGEDDSEAFKEAWK+ACSSTNAIFLV
Sbjct: 62  SEFSSMLRTRLEKMAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKDACSSTNAIFLV 121

Query: 121 PIDRTYHLKPITFSGPCNSPFAFK------------------------------------ 180
           P DR YHLKPITFSGPCNSP  FK                                    
Sbjct: 122 PCDRIYHLKPITFSGPCNSPLLFKIEGTIKASPHISDYEKDRRHWIIFQNISNFRVEGKG 181

Query: 181 --------------------PCKEAPT-VFWGSPKRAYAQSGAYHTIVESH----KCSNV 240
                               PCKEAPT V +        +   +      H    KC+NV
Sbjct: 182 IINGNGRKWWSNSCKVNKTLPCKEAPTAVTFYECTNLRVEGIRFRNAQRMHLSFQKCNNV 241

Query: 241 KALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPG 300
           KALNLWIYAPGNSPNTDGIHVT TQ I+I+NCLIMTGDDCISIVSGSKNVRAKGITCGPG
Sbjct: 242 KALNLWIYAPGNSPNTDGIHVTGTQSIVIKNCLIMTGDDCISIVSGSKNVRAKGITCGPG 301

Query: 301 HGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVT 360
           HGISIGSLGAGKSEAEVSNVVVDTAKF+GTSNGVRIKTWQGGKGYA+NIIFQNIVMDNVT
Sbjct: 302 HGISIGSLGAGKSEAEVSNVVVDTAKFSGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVT 361

Query: 361 NPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQD 398
           NPIIIDQNYCDQKEPCTQQA+AVQVSNVMYQNIRGTS SEVAVKFDCSKSFPCQ ILLQD
Sbjct: 362 NPIIIDQNYCDQKEPCTQQADAVQVSNVMYQNIRGTSASEVAVKFDCSKSFPCQGILLQD 421

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BLAST of Carg18670 vs. ExPASy Swiss-Prot
Match: P35336 (Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 3.5e-89
Identity = 184/375 (49.07%), Postives = 222/375 (59.20%), Query Frame = 0


Query: 81  SSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLVPIDRTYHLKPITFSGPCNSP 140
           +S+  NVDD+GA GDG DD++AF++AWK ACSST++  L+   + Y ++PI+FSGPC S 
Sbjct: 86  ASKTVNVDDFGAKGDGRDDTKAFEKAWKAACSSTSSAVLLVPKKNYLVRPISFSGPCKSG 145

Query: 141 FAFK-------------------------------------------------------- 200
              +                                                        
Sbjct: 146 LTMQIYGTIEASDDRSDYRKDGRHWLVFDSVQNLRVEGGGTINGNGKIWWQNSCKTNKAL 205

Query: 201 PCKEAPT--VFWGSPK---RAYAQSGAYHTIVESHKCSNVKALNLWIYAPGNSPNTDGIH 260
           PCK+APT   F+ S     +      A    V    C NV+A NL + AP NSPNTDGIH
Sbjct: 206 PCKDAPTALTFYKSKHVIVKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIH 265

Query: 261 VTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPGHGISIGSLGAGKSEAEVSNV 320
           VT TQ I I +C+I TGDDCISIV+GS+ VR   ITCGPGHGISIGSLG G SEA VS+V
Sbjct: 266 VTGTQNIHISSCVIGTGDDCISIVNGSRKVRVNDITCGPGHGISIGSLGYGNSEAHVSDV 325

Query: 321 VVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVTNPIIIDQNYCDQKEPCTQQA 380
           VV+ AK  GT+NGVRIKTWQGG G A NI FQN+ M NV NPIIIDQNYCDQ +PC +Q+
Sbjct: 326 VVNGAKLCGTTNGVRIKTWQGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQS 385

Query: 381 EAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQDIDLVHRDKADDKPTQAEASC 395
            AVQV NV+YQNI+GT  S VA+ FDCSK FPCQ I+L+D+DL     A      A+A C
Sbjct: 386 SAVQVKNVVYQNIKGTCASNVAITFDCSKRFPCQGIVLEDVDLEIEGGA-----AAKALC 445

[Close]

BLAST of Carg18670 vs. ExPASy Swiss-Prot
Match: Q9SFB7 (Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2)

HSP 1 Score: 328.6 bits (841), Expect = 1.0e-88
Identity = 195/441 (44.22%), Postives = 257/441 (58.28%), Query Frame = 0


Query: 19  LVAIVVFGFFSVCSSSYADVDPPPLIIRGD---GKDRDHQHYGYSSKFSSMLTTRLEKMA 78
           ++++ +  F   C SSY       L +  +     +R HQH G++++ S +      +  
Sbjct: 7   ILSVFLLTFLPSCFSSYPFNHRDDLFMSSNVYYETNRQHQH-GHNTRNSHL----KNRHG 66

Query: 79  SSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLV-PIDRTYHLKPITFS 138
            +P +S   FNV+ +GA  +G DDS+AF +AW+ ACSST  +++V P +R Y LK +TFS
Sbjct: 67  YAPRSSPRSFNVNTFGAKANGNDDSKAFMKAWEAACSSTGIVYIVAPKNRDYMLKAVTFS 126

Query: 139 GPCNS----------------PFAFK---------------------------------- 198
           GPC S                P  +K                                  
Sbjct: 127 GPCKSSLIIFKIYGRIEAWENPSDYKERRHWIVFENVNNLRVEGGGRIDGNGHIWWPKSC 186

Query: 199 ------PCKEAPT-VFWGSPKRAYAQSGAYHTIVESH----KCSNVKALNLWIYAPGNSP 258
                 PC  APT V +         +       + H     C NVKALNL + +P +SP
Sbjct: 187 KINPQLPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSP 246

Query: 259 NTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPGHGISIGSLGAGKSE 318
           NTDGIHV+ TQ ILIQ+ ++ TGDDCISIVSGS+NVRA GITCGPGHGISIGSLG   SE
Sbjct: 247 NTDGIHVSGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSE 306

Query: 319 AEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVTNPIIIDQNYCDQKE 378
           A VSNVVV+ A   GT+NGVRIKTWQGG G A+NIIFQ+I+M NVTNPIII+Q+YCD+ E
Sbjct: 307 AYVSNVVVNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVE 366

Query: 379 PCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQDIDLVHRDKADDKPT 395
            C +Q  AVQVSNV+Y+NI+GTS   +AVKF CSK+ PC+ I +Q++ LV + + D    
Sbjct: 367 ACPEQKSAVQVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQD---- 426

[Close]

BLAST of Carg18670 vs. ExPASy Swiss-Prot
Match: P05117 (Polygalacturonase-2 OS=Solanum lycopersicum OX=4081 GN=PG2 PE=1 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 2.4e-82
Identity = 174/374 (46.52%), Postives = 218/374 (58.29%), Query Frame = 0


Query: 83  EIFNVDDYGAMGDGED-DSEAFKEAWKEACSSTNAI-FLVPIDRTYHLKPITFSGPCNSP 142
           ++ NV  +GA GDG+  D+ AF++AW EACSS   + F+VP ++ Y LK ITFSGPC S 
Sbjct: 74  KVINVLSFGAKGDGKTYDNIAFEQAWNEACSSRTPVQFVVPKNKNYLLKQITFSGPCRSS 133

Query: 143 FAFK-------------------------------------------------------P 202
            + K                                                       P
Sbjct: 134 ISVKIFGSLEASSKISDYKDRRLWIAFDSVQNLVVGGGGTINGNGQVWWPSSCKINKSLP 193

Query: 203 CKEAPT--VFWGSPK---RAYAQSGAYHTIVESHKCSNVKALNLWIYAPGNSPNTDGIHV 262
           C++APT   FW              A    ++   C+NV A NL I A   SPNTDG+HV
Sbjct: 194 CRDAPTALTFWNCKNLKVNNLKSKNAQQIHIKFESCTNVVASNLMINASAKSPNTDGVHV 253

Query: 263 TATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPGHGISIGSLGAGKSEAEVSNVV 322
           + TQ I I + +I TGDDCISIVSGS+NV+A  ITCGPGHGISIGSLG+G SEA VSNV 
Sbjct: 254 SNTQYIQISDTIIGTGDDCISIVSGSQNVQATNITCGPGHGISIGSLGSGNSEAYVSNVT 313

Query: 323 VDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVTNPIIIDQNYCDQKEPCTQQAE 382
           V+ AK  G  NGVRIKTWQGG G A NI F N+ M +V  PIIIDQNYCD+ EPC QQ  
Sbjct: 314 VNEAKIIGAENGVRIKTWQGGSGQASNIKFLNVEMQDVKYPIIIDQNYCDRVEPCIQQFS 373

Query: 383 AVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQDIDLVHRDKADDKPTQAEASCK 395
           AVQV NV+Y+NI+GTS ++VA+KFDCS +FPC+ I++++I+LV       KP  +EA+CK
Sbjct: 374 AVQVKNVVYENIKGTSATKVAIKFDCSTNFPCEGIIMENINLVGE---SGKP--SEATCK 433

[Close]

BLAST of Carg18670 vs. ExPASy Swiss-Prot
Match: Q02096 (Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 2.7e-81
Identity = 193/427 (45.20%), Postives = 235/427 (55.04%), Query Frame = 0


Query: 14  LLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGDGKDRDHQHYGYSSKFSSMLTTRLEK 73
           LLLP  ++I+ F F+    SS+  +   PL+I  +G D       Y + F  +L      
Sbjct: 6   LLLP--ISILWFCFY----SSHTILQKDPLLICVNG-DPGFDQRAYPTYFGPILDEFSSI 65

Query: 74  MASSP-VASSEIFN--------------VDDYGAMGDGEDDSEAFKEAWKEACSSTNAIF 133
           M   P + S E FN              VDD+GA GDG DD++AF++AWK+ACSS  ++ 
Sbjct: 66  MGFEPSILSLERFNPVGGPETSPDTDISVDDFGARGDGTDDTKAFEKAWKDACSS-GSVL 125

Query: 134 LVPIDRTYHLKPITFSGPCNSPFAFK---------------------------------- 193
           +VP ++ Y LK ITFSGPC S    K                                  
Sbjct: 126 IVPENKNYLLKQITFSGPCKSDLRVKIRGTIEASSDQSDWVGHNRKRWIEFEDISNLTLE 185

Query: 194 -----------------------PCKEAPTVF-WGSPKRAYAQSGAYHTIVESH----KC 253
                                  PCK APT   + S K       +     + H    KC
Sbjct: 186 GGGTSNGNGETWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKC 245

Query: 254 SNVKALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITC 313
            +V A NL + AP +SPNTDGIH+T TQ I + N +I TGDDCISI SGSK V A  ITC
Sbjct: 246 QDVIASNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESGSKMVIATNITC 305

Query: 314 GPGHGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMD 364
           GPGHGISIGSLG   SEA VS V+VD      T+NG+RIKTWQGG G A+NI FQNIVM 
Sbjct: 306 GPGHGISIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGSGSAKNIKFQNIVMH 365

[Close]

BLAST of Carg18670 vs. ExPASy Swiss-Prot
Match: Q8RY29 (Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2)

HSP 1 Score: 287.0 bits (733), Expect = 3.4e-76
Identity = 171/390 (43.85%), Postives = 216/390 (55.38%), Query Frame = 0


Query: 69  TRLEKMASSPVASSEIFNVDDYGAMGDGE-DDSEAFKEAWKEACSSTNAI-FLVPIDRTY 128
           T L     + + +    +V D+GA GDG+ DD++AF  AWK+ACSS  A+  LVP   TY
Sbjct: 52  TGLRSFVRASLRTPTTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTY 111

Query: 129 HLKPITFSGPCNSPFAF------------------------------------------- 188
            LK I  +GPCNS                                               
Sbjct: 112 LLKSIQLTGPCNSILTVQIFGTLSASQKRSDYKDISKWIMFDGVNNLSVDGGDTGVVDGN 171

Query: 189 --------------KPCKEAPT--VFWGSPK---RAYAQSGAYHTIVESHKCSNVKALNL 248
                         KPC +APT   F+ S     +      A    +   KCSNV+  N+
Sbjct: 172 GETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNV 231

Query: 249 WIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPGHGISI 308
            + AP +SPNTDGIH+T TQ I +   +I TGDDCISI SGS+NV+   ITCGPGHGISI
Sbjct: 232 VVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISI 291

Query: 309 GSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVTNPIII 368
           GSLG   S+A VS V VD AK +GT NGVRIKT+QGG G A NIIFQNI MDNV NPIII
Sbjct: 292 GSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIII 351

Query: 369 DQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQDIDLVH 395
           DQ+YCD K  CT +  AVQV NV+Y++I GTS SE A+ F+CSK++PCQ I+L  +++  
Sbjct: 352 DQDYCD-KSKCTTEKSAVQVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDRVNI-- 411

[Close]

BLAST of Carg18670 vs. ExPASy TrEMBL
Match: A0A6J1GMX8 (polygalacturonase QRT2-like OS=Cucurbita moschata OX=3662 GN=LOC111455865 PE=3 SV=1)

HSP 1 Score: 723.8 bits (1867), Expect = 4.0e-205
Identity = 376/459 (81.92%), Postives = 381/459 (83.01%), Query Frame = 0


Query: 1   MCRGLLGRRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGDGKDRDHQHYGYS 60
           MCRGLLGRRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGDGKDRDHQHYGYS
Sbjct: 1   MCRGLLGRRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGDGKDRDHQHYGYS 60

Query: 61  SKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLV 120
           SKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLV
Sbjct: 61  SKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLV 120

Query: 121 PIDRTYHLKPITFSGPCNSPFAFK------------------------------------ 180
           PIDRTYHLKPITFSGPCNSPFAFK                                    
Sbjct: 121 PIDRTYHLKPITFSGPCNSPFAFKIEGTIKASPHISDYEKDRRHWIIFENLSEFTVEGKG 180

Query: 181 --------------------PCKEAPT-VFWGSPKRAYAQSGAYHTIVESH----KCSNV 240
                               PCKEAPT V +        +   +    + H    KCSNV
Sbjct: 181 TINGNGRKWWLNSCKVNKTLPCKEAPTAVTFYQCTNLRVEGLRFRNAQKMHLSFQKCSNV 240

Query: 241 KALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPG 300
           KALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPG
Sbjct: 241 KALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPG 300

Query: 301 HGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVT 360
           HGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVT
Sbjct: 301 HGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVT 360

Query: 361 NPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQD 399
           NPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCS+SFPCQEILLQD
Sbjct: 361 NPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSESFPCQEILLQD 420

[Close]

BLAST of Carg18670 vs. ExPASy TrEMBL
Match: A0A6J1JXJ9 (polygalacturonase QRT2-like OS=Cucurbita maxima OX=3661 GN=LOC111488393 PE=3 SV=1)

HSP 1 Score: 683.7 bits (1763), Expect = 4.5e-193
Identity = 361/461 (78.31%), Postives = 371/461 (80.48%), Query Frame = 0


Query: 1   MCRGLLG--RRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGDGKDRDHQHYG 60
           MCRGLLG   RCRLLLLLPFL+AIVVF FFS+CSSSYADVDPP LI RGDGKDRD Q++G
Sbjct: 1   MCRGLLGCRCRCRLLLLLPFLIAIVVFEFFSLCSSSYADVDPPLLINRGDGKDRDQQYHG 60

Query: 61  YSSKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIF 120
           YSSKFSSMLTTRLEKMA SPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIF
Sbjct: 61  YSSKFSSMLTTRLEKMAPSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIF 120

Query: 121 LVPIDRTYHLKPITFSGPCNSPFAFK---------------------------------- 180
           LVP DRTYHLKPITFSGPCNSPFAFK                                  
Sbjct: 121 LVPNDRTYHLKPITFSGPCNSPFAFKIEGTIKASPHISDYEKDRRHWIIFENLTEFTVEG 180

Query: 181 ----------------------PCKEAPT-VFWGSPKRAYAQSGAYHTIVESH----KCS 240
                                 PCKEAPT V +        +   +    + H    KCS
Sbjct: 181 KGIINGNGRKWWLNSCKVNKTLPCKEAPTAVTFYQCTNLRVEGLRFRNAQKMHLSFQKCS 240

Query: 241 NVKALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCG 300
           NVKALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCG
Sbjct: 241 NVKALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCG 300

Query: 301 PGHGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDN 360
           PGHGISIGSLGAGKSEAEVS+VVVDTAKFTGTSNGVRIKTWQGGKGYA+NIIFQNIVMDN
Sbjct: 301 PGHGISIGSLGAGKSEAEVSDVVVDTAKFTGTSNGVRIKTWQGGKGYAQNIIFQNIVMDN 360

Query: 361 VTNPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILL 399
           VTNPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPC EILL
Sbjct: 361 VTNPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCLEILL 420

[Close]

BLAST of Carg18670 vs. ExPASy TrEMBL
Match: O81246 (Polygalacturonase OS=Cucumis melo OX=3656 GN=MPG3 PE=2 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.9e-160
Identity = 310/460 (67.39%), Postives = 333/460 (72.39%), Query Frame = 0


Query: 1   MCRGLLGRRCRLLLLLPFLVAIVV-FGFFSVCSSSYADVDPP-PLIIRGDGKDRDHQHYG 60
           MCR LLGRR   L LL FL  +VV F  FS C  SY DVD P P I  GD +D    +Y 
Sbjct: 1   MCRRLLGRRPCCLSLLTFLFVVVVNFDTFSTCFGSYPDVDNPLPSISSGDKEDYGQHYYE 60

Query: 61  Y-SSKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAI 120
           + SS+FSSML TRLEKM SSP+AS EIFNVDDYGAMGDGEDD+EAFKE WK+ACSSTNAI
Sbjct: 61  HSSSEFSSMLRTRLEKMVSSPLASPEIFNVDDYGAMGDGEDDTEAFKETWKDACSSTNAI 120

Query: 121 FLVPIDRTYHLKPITFSGPCNSPFAFK--------------------------------- 180
           FLVP DR YHLKPITFSGPCNSP  F+                                 
Sbjct: 121 FLVPCDRVYHLKPITFSGPCNSPLLFQIEGTVKASPHISDYEKDRRHWIIFQNLLGLRVE 180

Query: 181 -----------------------PCKEAPT--VFWGSPK---RAYAQSGAYHTIVESHKC 240
                                  PCKEAPT   F+              A   ++   +C
Sbjct: 181 GKGIINGNGRKWWLNSCKVNKTLPCKEAPTAVTFYQCTNLRVEGLRFRNAQQMLLSFQRC 240

Query: 241 SNVKALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITC 300
           +NVKALNLWIYAPGNSPNTDGIHVT TQ I+I+NCLIMTGDDCISIVSGSKNVRAKGITC
Sbjct: 241 NNVKALNLWIYAPGNSPNTDGIHVTGTQFIVIKNCLIMTGDDCISIVSGSKNVRAKGITC 300

Query: 301 GPGHGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMD 360
           GPGHGISIGSLGAGKSEAEVSNVVVDTAKF+GTSNGVRIKTWQGGKGYA+NIIFQNIVMD
Sbjct: 301 GPGHGISIGSLGAGKSEAEVSNVVVDTAKFSGTSNGVRIKTWQGGKGYAQNIIFQNIVMD 360

Query: 361 NVTNPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEIL 397
           NVTNPIII+QNYCDQKEPCTQQA+AV VSNVMYQNIRGTS SEVAVKFDCSKS PCQ IL
Sbjct: 361 NVTNPIIINQNYCDQKEPCTQQADAVAVSNVMYQNIRGTSASEVAVKFDCSKSVPCQGIL 420

[Close]

BLAST of Carg18670 vs. ExPASy TrEMBL
Match: A0A6J1CWK1 (polygalacturonase QRT2 OS=Momordica charantia OX=3673 GN=LOC111015052 PE=3 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.9e-154
Identity = 301/461 (65.29%), Postives = 332/461 (72.02%), Query Frame = 0


Query: 1   MCRGLLGRRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGDGKDRDHQHYGYS 60
           MCR L   R R LLLLP LV ++V   +   S+S+A VDPPP    GDG D D +HY YS
Sbjct: 1   MCRRL---RTRCLLLLPLLVTVLVSDLY---STSHAAVDPPPSFSSGDGVDHD-RHYEYS 60

Query: 61  SKF--SSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIF 120
           S+   S +LTT+LE+ A SPVAS EIFNVDD+GAMGDGEDDSEAFKEAWKEACSSTN I 
Sbjct: 61  SELLDSFVLTTKLERGAPSPVASPEIFNVDDFGAMGDGEDDSEAFKEAWKEACSSTNGIL 120

Query: 121 LVPIDRTYHLKPITFSGPCNSPFAFK---------------------------------- 180
           LVP +RTYHLKPITFSGPCNSP  FK                                  
Sbjct: 121 LVPYERTYHLKPITFSGPCNSPLVFKIDGTIKASPHLSDYEKDRRHWIVFQNMEDFTVKG 180

Query: 181 ----------------------PCKEAPT-VFWGSPKRAYAQSGAYHTIVESH----KCS 240
                                 PCK+APT V +        +   +    + H    KC+
Sbjct: 181 DGTINGNGRKWWLNSCKVNKTLPCKDAPTAVTFYQCTNLRVEGLRFRNAQKMHLSFQKCN 240

Query: 241 NVKALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCG 300
           NVKALNLWIYAPGNSPNTDGIHVT TQ I+I+NCLIMTGDDCISIVSGSKNVRAKGITCG
Sbjct: 241 NVKALNLWIYAPGNSPNTDGIHVTGTQFIVIENCLIMTGDDCISIVSGSKNVRAKGITCG 300

Query: 301 PGHGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDN 360
           PGHGISIGSLGAGKSEAEVSNVVVDTAKF+GTSNGVRIKTWQGGKGYA+NIIFQNIVM+N
Sbjct: 301 PGHGISIGSLGAGKSEAEVSNVVVDTAKFSGTSNGVRIKTWQGGKGYAQNIIFQNIVMNN 360

Query: 361 VTNPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILL 399
           V+NPIIIDQNYCD+KE C QQA+AVQVSNV Y+NIRGTS SEVAVKFDCSKS PCQ ILL
Sbjct: 361 VSNPIIIDQNYCDRKERCKQQADAVQVSNVKYRNIRGTSASEVAVKFDCSKSLPCQGILL 420

[Close]

BLAST of Carg18670 vs. ExPASy TrEMBL
Match: A0A0A0K6J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G427620 PE=3 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 1.3e-128
Identity = 255/405 (62.96%), Postives = 283/405 (69.88%), Query Frame = 0


Query: 1   MCRGLLGRRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPP-PLIIRGDGKDRDHQHYGY 60
           MCR LLGR C L LL    V +V+F   S CS SY DVD P P I  GD K+ D QHY Y
Sbjct: 1   MCRPLLGRPCCLSLLTFLFVVVVIFDILSTCSGSYPDVDNPLPSISSGD-KEVDGQHYKY 60

Query: 61  SSKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFL 120
           SS+FSSML TRLEKMASSP+AS EIFNVDDYGAMGDGEDDSEAFKE WK+ACSSTNAIFL
Sbjct: 61  SSEFSSMLRTRLEKMASSPLASPEIFNVDDYGAMGDGEDDSEAFKETWKDACSSTNAIFL 120

Query: 121 VPIDRTYHLKPITFSGPCNSPFAFK----------------------------------- 180
           VP DR YHLKPITF+GPCNSP  FK                                   
Sbjct: 121 VPCDRVYHLKPITFTGPCNSPLLFKIEGTIKASPHISDYEKDRRHWIIFQNLLGLRVEGK 180

Query: 181 ---------------------PCKEAPT-VFWGSPKRAYAQSGAYHTIVESH----KCSN 240
                                PCKEAPT V +        +   +    + H    KC+N
Sbjct: 181 GIINGNGRKWWLNSCKVNKTLPCKEAPTAVTFFQCTNLRVEGLRFRNAQQMHLSFQKCNN 240

Query: 241 VKALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGP 300
           VKALNLWI++PGNSPNTDGIHVT TQ I+I+NCLIMTGDDC+SIVSGSKNVRAKGITCGP
Sbjct: 241 VKALNLWIHSPGNSPNTDGIHVTGTQFIVIKNCLIMTGDDCLSIVSGSKNVRAKGITCGP 300

Query: 301 GHGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNV 344
           GHGISIGSLGAGK+EAEVSNVVVDTAKF+GT+NGVRIKTWQGGKGYA+NIIFQNIVMDNV
Sbjct: 301 GHGISIGSLGAGKTEAEVSNVVVDTAKFSGTTNGVRIKTWQGGKGYAQNIIFQNIVMDNV 360

[Close]

BLAST of Carg18670 vs. TAIR 10
Match: AT3G07970.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 328.6 bits (841), Expect = 7.1e-90
Identity = 195/441 (44.22%), Postives = 257/441 (58.28%), Query Frame = 0


Query: 19  LVAIVVFGFFSVCSSSYADVDPPPLIIRGD---GKDRDHQHYGYSSKFSSMLTTRLEKMA 78
           ++++ +  F   C SSY       L +  +     +R HQH G++++ S +      +  
Sbjct: 7   ILSVFLLTFLPSCFSSYPFNHRDDLFMSSNVYYETNRQHQH-GHNTRNSHL----KNRHG 66

Query: 79  SSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLV-PIDRTYHLKPITFS 138
            +P +S   FNV+ +GA  +G DDS+AF +AW+ ACSST  +++V P +R Y LK +TFS
Sbjct: 67  YAPRSSPRSFNVNTFGAKANGNDDSKAFMKAWEAACSSTGIVYIVAPKNRDYMLKAVTFS 126

Query: 139 GPCNS----------------PFAFK---------------------------------- 198
           GPC S                P  +K                                  
Sbjct: 127 GPCKSSLIIFKIYGRIEAWENPSDYKERRHWIVFENVNNLRVEGGGRIDGNGHIWWPKSC 186

Query: 199 ------PCKEAPT-VFWGSPKRAYAQSGAYHTIVESH----KCSNVKALNLWIYAPGNSP 258
                 PC  APT V +         +       + H     C NVKALNL + +P +SP
Sbjct: 187 KINPQLPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSP 246

Query: 259 NTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPGHGISIGSLGAGKSE 318
           NTDGIHV+ TQ ILIQ+ ++ TGDDCISIVSGS+NVRA GITCGPGHGISIGSLG   SE
Sbjct: 247 NTDGIHVSGTQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSE 306

Query: 319 AEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVTNPIIIDQNYCDQKE 378
           A VSNVVV+ A   GT+NGVRIKTWQGG G A+NIIFQ+I+M NVTNPIII+Q+YCD+ E
Sbjct: 307 AYVSNVVVNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVE 366

Query: 379 PCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQDIDLVHRDKADDKPT 395
            C +Q  AVQVSNV+Y+NI+GTS   +AVKF CSK+ PC+ I +Q++ LV + + D    
Sbjct: 367 ACPEQKSAVQVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQD---- 426

[Close]

BLAST of Carg18670 vs. TAIR 10
Match: AT2G41850.1 (polygalacturonase abscission zone A. thaliana )

HSP 1 Score: 287.0 bits (733), Expect = 2.4e-77
Identity = 171/390 (43.85%), Postives = 216/390 (55.38%), Query Frame = 0


Query: 69  TRLEKMASSPVASSEIFNVDDYGAMGDGE-DDSEAFKEAWKEACSSTNAI-FLVPIDRTY 128
           T L     + + +    +V D+GA GDG+ DD++AF  AWK+ACSS  A+  LVP   TY
Sbjct: 52  TGLRSFVRASLRTPTTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTY 111

Query: 129 HLKPITFSGPCNSPFAF------------------------------------------- 188
            LK I  +GPCNS                                               
Sbjct: 112 LLKSIQLTGPCNSILTVQIFGTLSASQKRSDYKDISKWIMFDGVNNLSVDGGDTGVVDGN 171

Query: 189 --------------KPCKEAPT--VFWGSPK---RAYAQSGAYHTIVESHKCSNVKALNL 248
                         KPC +APT   F+ S     +      A    +   KCSNV+  N+
Sbjct: 172 GETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNV 231

Query: 249 WIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPGHGISI 308
            + AP +SPNTDGIH+T TQ I +   +I TGDDCISI SGS+NV+   ITCGPGHGISI
Sbjct: 232 VVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISI 291

Query: 309 GSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVTNPIII 368
           GSLG   S+A VS V VD AK +GT NGVRIKT+QGG G A NIIFQNI MDNV NPIII
Sbjct: 292 GSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIII 351

Query: 369 DQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQDIDLVH 395
           DQ+YCD K  CT +  AVQV NV+Y++I GTS SE A+ F+CSK++PCQ I+L  +++  
Sbjct: 352 DQDYCD-KSKCTTEKSAVQVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDRVNI-- 411

[Close]

BLAST of Carg18670 vs. TAIR 10
Match: AT3G57510.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 274.6 bits (701), Expect = 1.2e-73
Identity = 171/412 (41.50%), Postives = 224/412 (54.37%), Query Frame = 0


Query: 58  GYSSKFSSMLTTRLEKMASSPVAS----------SEIFNVDDYGAMGDGE-DDSEAFKEA 117
           GY  +  S  +  L K+ +  V S          +   +V ++GA GDG+ DD++AFK+A
Sbjct: 31  GYGHEDGSFESDSLLKLNNDDVLSLISSDETTLEASTVSVSNFGAKGDGKTDDTQAFKKA 90

Query: 118 WKEACSSTNAI--FLVPIDRTYHLKPITFSGPCNSPFAF--------------------- 177
           WK+AC STN +  FLVP  +TY LK   F GPC S   F                     
Sbjct: 91  WKKAC-STNGVTTFLVPKGKTYLLKSTRFRGPCKSLRNFQILGTLSASTKRSDYKDKNHW 150

Query: 178 ------------------------------------KPCKEAPTVFW-----GSPKRAYA 237
                                               KPC +APT            +   
Sbjct: 151 LILEDVNNLSIDGGSTGIINGNGKTWWQNSCKIDKSKPCTKAPTALTLYNLKNLNVKNLR 210

Query: 238 QSGAYHTIVESHKCSNVKALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISI 297
              A    +   KC+ V+  N+ I APG+SPNTDGIH+T TQ I + N  I TGDDCISI
Sbjct: 211 VKNAQQIQISIEKCNKVEVSNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISI 270

Query: 298 VSGSKNVRAKGITCGPGHGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGK 357
             G++N++   +TCGPGHGISIGSLG   S+A VS + VD AKF+ + NGVRIKT+QGG 
Sbjct: 271 EDGTQNLQIFDLTCGPGHGISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQGGS 330

Query: 358 GYAENIIFQNIVMDNVTNPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAV 395
           G A+NI FQNI M+NV NPIIIDQ+YCD K+ C  Q  AVQV NV+Y+NI GTS ++VA+
Sbjct: 331 GTAKNIKFQNIRMENVKNPIIIDQDYCD-KDKCEDQESAVQVKNVVYKNISGTSATDVAI 390

[Close]

BLAST of Carg18670 vs. TAIR 10
Match: AT1G80170.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 250.0 bits (637), Expect = 3.2e-66
Identity = 150/397 (37.78%), Postives = 205/397 (51.64%), Query Frame = 0


Query: 60  SSKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDG-EDDSEAFKEAWKEACSS-TNAI 119
           ++ F S+L     +  S+   S  + +V ++GA G+G  DD++AF +AWK ACSS     
Sbjct: 28  ANSFESLLQLPRRQSRSTRPRSERLLHVGNFGAKGNGVTDDTKAFADAWKTACSSKVKTR 87

Query: 120 FLVPIDRTYHLKPITFSGPC---------------NSPFAFKPCKEAPTVFWGSPKRAYA 179
            LVP + T  L+PI  SGPC               N P  ++       +++    R   
Sbjct: 88  ILVPENYTCLLRPIDLSGPCKARLTLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTV 147

Query: 180 QSG------------------------AYHTIVESHKCSNVKALN--------------- 239
           + G                           T +  HKC N++  N               
Sbjct: 148 EGGGTVNGMGQEWWERSCKHNHSNPCRGAPTALTFHKCKNMRVENLNVIDSQQMHIALTS 207

Query: 240 --------LWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGIT 299
                   L + AP  SPNTDGIH++ ++ I+I N  + TGDDCISIV  S  +    I 
Sbjct: 208 CRRVTISGLKVIAPATSPNTDGIHISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNII 267

Query: 300 CGPGHGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVM 359
           CGPGHGISIGSLG  KS  EV ++ VDTA  + T+NGVRIKTWQGG G    IIF+NI M
Sbjct: 268 CGPGHGISIGSLGKSKSWEEVRDITVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKM 327

Query: 360 DNVTNPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEI 393
           +NV+NPIIIDQ YCD ++PC  Q  A+ + N+ + ++RGTS S+ A+K  CS S PC+ I
Sbjct: 328 NNVSNPIIIDQYYCDSRKPCANQTSAISIENISFVHVRGTSASKEAIKISCSDSSPCRNI 387

[Close]

BLAST of Carg18670 vs. TAIR 10
Match: AT1G70500.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 245.4 bits (625), Expect = 8.0e-65
Identity = 142/387 (36.69%), Postives = 196/387 (50.65%), Query Frame = 0


Query: 76  SSPVASSEIFNVDDYGAMGDG-EDDSEAFKEAWKEACSSTNAIFLVPIDRTYHLKPITFS 135
           +S  +   + NVD + A GDG  DD++AF  AW  ACS+ N++ LVP  R+Y +    F 
Sbjct: 58  TSQYSGKNLVNVDSFNASGDGVSDDTQAFIRAWTMACSAPNSVLLVPQGRSYLVNATKFD 117

Query: 136 GPCNSPFAFK-------------------------------------------------- 195
           GPC      +                                                  
Sbjct: 118 GPCQEKLIIQIDGTIIAPDEPSQWDPKFPRNWLQFSKLQGVVFQGNGVIDGSGTKWWAAS 177

Query: 196 -------PCKEAPTVFWGSPKRAYAQSGAY------------HTIVESHKCSNVKALNLW 255
                  PC  APT         Y+ S  Y            H I++  + + V+   + 
Sbjct: 178 CKKNKSNPCVGAPTAL-----TIYSSSNVYVRGLTIRNSQQMHLIIQ--RSTTVRISRVM 237

Query: 256 IYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPGHGISIG 315
           + +PG+SPNTDGIH+TA+  +++Q+  I TGDDC+SIV+GS  ++ K I CGPGHGISIG
Sbjct: 238 VTSPGDSPNTDGIHITASTDVVVQDSKISTGDDCVSIVNGSAKIKMKRIYCGPGHGISIG 297

Query: 316 SLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVTNPIIID 375
           SLG G S+  V+ VV++TA    T+NG+RIKTWQGG GY + + F+N+VM +V NPIIID
Sbjct: 298 SLGQGHSKGTVTAVVLETAFLKNTTNGLRIKTWQGGNGYVKGVRFENVVMQDVANPIIID 357

Query: 376 QNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSKSFPCQEILLQDIDLVHR 393
           Q YCD    C  Q  AV +S +MY+NI GT+ S  A+ F CS + PC  I+L +I+L   
Sbjct: 358 QFYCDSPSTCQNQTSAVHISEIMYRNITGTTKSSKAINFKCSDAVPCSHIVLNNINLEGN 417

The following BLAST results are available for this feature:

BLAST of Carg18670 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014247.1	3.9e-231	100.00	hypothetical protein SDJN02_24422, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022953263.1	8.2e-205	81.92	polygalacturonase QRT2-like [Cucurbita moschata]	[more]
XP_023547692.1	1.7e-197	79.52	polygalacturonase QRT2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022991888.1	9.4e-193	78.31	polygalacturonase QRT2-like [Cucurbita maxima]	[more]
XP_038899303.1	2.9e-170	70.09	polygalacturonase QRT2-like [Benincasa hispida]	[more]

BLAST of Carg18670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35336	3.5e-89	49.07	Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1	[more]
Q9SFB7	1.0e-88	44.22	Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2	[more]
P05117	2.4e-82	46.52	Polygalacturonase-2 OS=Solanum lycopersicum OX=4081 GN=PG2 PE=1 SV=1	[more]
Q02096	2.7e-81	45.20	Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1	[more]
Q8RY29	3.4e-76	43.85	Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2	[more]

BLAST of Carg18670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GMX8	4.0e-205	81.92	polygalacturonase QRT2-like OS=Cucurbita moschata OX=3662 GN=LOC111455865 PE=3 S...	[more]
A0A6J1JXJ9	4.5e-193	78.31	polygalacturonase QRT2-like OS=Cucurbita maxima OX=3661 GN=LOC111488393 PE=3 SV=...	[more]
O81246	3.9e-160	67.39	Polygalacturonase OS=Cucumis melo OX=3656 GN=MPG3 PE=2 SV=1	[more]
A0A6J1CWK1	1.9e-154	65.29	polygalacturonase QRT2 OS=Momordica charantia OX=3673 GN=LOC111015052 PE=3 SV=1	[more]
A0A0A0K6J9	1.3e-128	62.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G427620 PE=3 SV=1	[more]

BLAST of Carg18670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07970.1	7.1e-90	44.22	Pectin lyase-like superfamily protein	[more]
AT2G41850.1	2.4e-77	43.85	polygalacturonase abscission zone A. thaliana	[more]
AT3G57510.1	1.2e-73	41.50	Pectin lyase-like superfamily protein	[more]
AT1G80170.1	3.2e-66	37.78	Pectin lyase-like superfamily protein	[more]
AT1G70500.1	8.0e-65	36.69	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 203..224 e-value: 1500.0 score: 6.0 coord: 176..202 e-value: 960.0 score: 7.3 coord: 285..306 e-value: 2100.0 score: 4.9 coord: 256..277 e-value: 1000.0 score: 7.1
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 170..380 e-value: 1.9E-68 score: 230.9
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 233..246
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 162..380 e-value: 3.7E-73 score: 248.3
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 70..157 e-value: 2.6E-11 score: 45.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 368..398
None	No IPR available	PANTHER	PTHR31375:SF167	POLYGALACTURONASE QRT2	coord: 172..384
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 172..384
None	No IPR available	PANTHER	PTHR31375:SF167	POLYGALACTURONASE QRT2	coord: 68..144
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 68..144
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 73..395

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18670-RA	Carg18670-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity