Carg18561 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18561
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Plant protein of unknown function (DUF863)
Location	Carg_Chr07: 2969846 .. 2971881 (+)
RNA-Seq Expression	Carg18561
Synteny	Carg18561

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGATTGGCTGGAATCTGACCCCAAACATCGCAGAACTTGGGGGACGTTTCTGTTCCTGTTCTTGTTCATGTTCATGTTCGTGTTCTTGTTCCCTTCTTTTTTTTTTCACTGGGTAAACGAGTGAGAATCTTTTTGTTTCAGCTCATATTATCTTCCTCTTTCCTTTATTTATTCACTATTGCTTTGAGCGGAATGGTGGAGTCCTCCATGTTCCATCGATTTCTGTGCAAACGGATTAGGATTTTCTTGCCGGAACTTCTTGGAGGATATGAAGTTTCTTCTTCTTCTTCTTCTTCTTCGTCATCCTCCTTTTCATCTTAGATTTTGACTTCTTTTGCAGTGTTCTGAAATATTGAAGTTCATGCCAAGCTGCAATTCCATCTGCTGATCGGTCGTTTGGATTACGGGTTATTGTTCAGGTAATTCTATAGGTTTTTTCGAGTTTGCTTTCGTTTTTTTCTTTTTGTTAGTCTTTCGATTGATCTGAGTTGAATTCGAGGTTCGATCCAACTTCGTCATTGTAATCTGTAATTAGTGGTGATCTTCGTTTGGTTTTAATGAATTACAGAGTTTCCATGGAAGCGAATTCTTTCGAGTATAATGATTTTTTTTTTTTTGTTTTGTTTTGTTTGGGAGTTGCGCATTAAGTGTTCGACGTAATGACTGAATGAGATAGGGAGTATTTTGGATAGCGAACAAAAGACCAATAAAACGTTATCACAAACTTTTATTCATTCGTACTGTACTCCTCTGTCCTCATTATAGAATTGCTACACAATACATAATTCGTAATGCCGTTGAACAGTGAAATGGCATATATTATATATTTATTTATTTATCAAACTCGAGACCTTTGGATTAATGATTTTTCAGGCAAGAATTTATTCCAGTAGCAGATTCTGAATTTCTGAGCCGCTTCCTTTTTTATTGATAGTCTTCTTTCTGTTTTTTCTCTCTTTATTCCTCAGATTAGATTCAAGACTGCATCAGCTAAAATCCCAATGGAAAAGCTGCCTGAGGTAAACGAAAAGGAGTTCATGAGGATGGCTATGTTAAAGCACGAAGAAACATTCAAACAACAGGTTTTTCCCCAATTTTGATCTTCAATTTGCCTTTCATTCTTTTGGTTTTGAGTTCAAAACAGCCATGCAATTATTGAACTGTTAAATGATGCATCTCTTCATTTTTTCCACTGGGTTTTTTCAATCTGCCCATCTTAACAAGATCTGATTCAACTGAATCCATAATTTTGATAGTATTTCCCTTTTTCTTTTAATGGGTGCTTTGAATTTTTTGTGCCATGGCAATGGATGGATTGGATTGATAGTCATTTTCCGTTTGGGTTTTTTTTTTCTTTTTCATATCATCACCTAATCTATTATTCATGTTCTAAGCTTGGGAAGGCATATTGTAGGTGCATGAACTTCATCGGCTTTATCGAATCCAAAAGACATTGATGAAAAACATGGAGAAAAACAGGCAAAGTGGATGGAATCCAGAGAGTTGGGATAAAAGGAATGAGATATGTTTCCGACAAATTTATGAACAGGATGCAAAAACTTACTATAGATCATCAACAACTCATTCGGTCAAAATAGATTTGGAACAGCCTGCTGAAGATGATCAAACAGAATCCAGCAGTGGAGCTCTGCAGACCATAAACGAGAACGAACTGGAACTTACTTTAGGGCCTTCGAGTTACAATACTTCAGATTCAGGAGTAACCCACTCTTCTTCTTCAACAGGGTCCAGCCATGAGGGAAGACGTAGGGATTCAAAGCAAGTACTTAAGGGTCAGGAAATGGAGGTGTTGGGAGTGATTGAAAATTCTTCAGGCTACCAAAATGGAAGTCATAGGGGTGAGAAGAAGATGATGCTGGATTACCCTCCTTGGCTTTTTCATGTTGTGAGCCCTAACATGACTTAATTTTCAAGGGGAAAAAAAAAATTATTTGAATGAAATTATATGAGAAGACCTTTGATTGCTTCTCATTGACTAATCAACAGGGGAAATTGATGTGTAGTTGTTTTTAA

mRNA sequence

GGAGATTGGCTGGAATCTGACCCCAAACATCGCAGAACTTGGGGGACGTTTCTGTTCCTGTTCTTGTTCATGTTCATGTTCGTGTTCTTGTTCCCTTCTTTTTTTTTTCACTGGGTAAACGAGTGAGAATCTTTTTGTTTCAGCTCATATTATCTTCCTCTTTCCTTTATTTATTCACTATTGCTTTGAGCGGAATGGTGGAGTCCTCCATGTTCCATCGATTTCTGTGCAAACGGATTAGGATTTTCTTGCCGGAACTTCTTGGAGGATATGAAGTTTCTTCTTCTTCTTCTTCTTCTTCGTCATCCTCCTTTTCATCTTAGATTTTGACTTCTTTTGCAGTGTTCTGAAATATTGAAGTTCATGCCAAGCTGCAATTCCATCTGCTGATCGGTCGTTTGGATTACGGGTTATTGTTCAGATTAGATTCAAGACTGCATCAGCTAAAATCCCAATGGAAAAGCTGCCTGAGGTAAACGAAAAGGAGTTCATGAGGATGGCTATGTTAAAGCACGAAGAAACATTCAAACAACAGGTGCATGAACTTCATCGGCTTTATCGAATCCAAAAGACATTGATGAAAAACATGGAGAAAAACAGGCAAAGTGGATGGAATCCAGAGAGTTGGGATAAAAGGAATGAGATATGTTTCCGACAAATTTATGAACAGGATGCAAAAACTTACTATAGATCATCAACAACTCATTCGGTCAAAATAGATTTGGAACAGCCTGCTGAAGATGATCAAACAGAATCCAGCAGTGGAGCTCTGCAGACCATAAACGAGAACGAACTGGAACTTACTTTAGGGCCTTCGAGTTACAATACTTCAGATTCAGGAGTAACCCACTCTTCTTCTTCAACAGGGTCCAGCCATGAGGGAAGACGTAGGGATTCAAAGCAAGTACTTAAGGGTCAGGAAATGGAGGTGTTGGGAGTGATTGAAAATTCTTCAGGCTACCAAAATGGAAGTCATAGGGGTGAGAAGAAGATGATGCTGGATTACCCTCCTTGGCTTTTTCATGTTGTGAGCCCTAACATGACTTAATTTTCAAGGGGAAAAAAAAAATTATTTGAATGAAATTATATGAGAAGACCTTTGATTGCTTCTCATTGACTAATCAACAGGGGAAATTGATGTGTAGTTGTTTTTAA

Coding sequence (CDS)

ATGGAAAAGCTGCCTGAGGTAAACGAAAAGGAGTTCATGAGGATGGCTATGTTAAAGCACGAAGAAACATTCAAACAACAGGTGCATGAACTTCATCGGCTTTATCGAATCCAAAAGACATTGATGAAAAACATGGAGAAAAACAGGCAAAGTGGATGGAATCCAGAGAGTTGGGATAAAAGGAATGAGATATGTTTCCGACAAATTTATGAACAGGATGCAAAAACTTACTATAGATCATCAACAACTCATTCGGTCAAAATAGATTTGGAACAGCCTGCTGAAGATGATCAAACAGAATCCAGCAGTGGAGCTCTGCAGACCATAAACGAGAACGAACTGGAACTTACTTTAGGGCCTTCGAGTTACAATACTTCAGATTCAGGAGTAACCCACTCTTCTTCTTCAACAGGGTCCAGCCATGAGGGAAGACGTAGGGATTCAAAGCAAGTACTTAAGGGTCAGGAAATGGAGGTGTTGGGAGTGATTGAAAATTCTTCAGGCTACCAAAATGGAAGTCATAGGGGTGAGAAGAAGATGATGCTGGATTACCCTCCTTGGCTTTTTCATGTTGTGAGCCCTAACATGACTTAA

Protein sequence

MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDKRNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGPSSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKKMMLDYPPWLFHVVSPNMT

Homology

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BLAST of Carg18561 vs. NCBI nr
Match: KAG7026947.1 (hypothetical protein SDJN02_10955 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 388.3 bits (996), Expect = 4.0e-104
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK
Sbjct: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
           RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP
Sbjct: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120

Query: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKKM 180
           SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKKM
Sbjct: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKKM 180

Query: 181 MLDYPPWLFHVVSPNMT 198
           MLDYPPWLFHVVSPNMT
Sbjct: 181 MLDYPPWLFHVVSPNMT 197

[Close]

BLAST of Carg18561 vs. NCBI nr
Match: XP_023517031.1 (uncharacterized protein LOC111780910 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 381.3 bits (978), Expect = 4.9e-102
Identity = 194/197 (98.48%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYR QKTLMKNMEK+RQSGWNPESWDK
Sbjct: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRTQKTLMKNMEKSRQSGWNPESWDK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
           RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP
Sbjct: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120

Query: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKKM 180
           SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKKM
Sbjct: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKKM 180

Query: 181 MLDYPPWLFHVVSPNMT 198
           MLDYPPWLF VVSPNMT
Sbjct: 181 MLDYPPWLFQVVSPNMT 197

[Close]

BLAST of Carg18561 vs. NCBI nr
Match: XP_022963328.1 (uncharacterized protein LOC111463569 [Cucurbita moschata] >XP_022963329.1 uncharacterized protein LOC111463569 [Cucurbita moschata])

HSP 1 Score: 377.5 bits (968), Expect = 7.1e-101
Identity = 192/197 (97.46%), Postives = 193/197 (97.97%), Query Frame = 0


Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYR QKTLMKNMEKNRQSGWNPESWDK
Sbjct: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRTQKTLMKNMEKNRQSGWNPESWDK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
           RNEICFRQIYEQDAKTYYRSST HSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP
Sbjct: 61  RNEICFRQIYEQDAKTYYRSSTIHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120

Query: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKKM 180
           SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSH+GEKKM
Sbjct: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHKGEKKM 180

Query: 181 MLDYPPWLFHVVSPNMT 198
            LDYPPWLF VVSPNMT
Sbjct: 181 TLDYPPWLFQVVSPNMT 197

[Close]

BLAST of Carg18561 vs. NCBI nr
Match: XP_023003698.1 (uncharacterized protein LOC111497211 [Cucurbita maxima] >XP_023003699.1 uncharacterized protein LOC111497211 [Cucurbita maxima])

HSP 1 Score: 366.3 bits (939), Expect = 1.6e-97
Identity = 189/197 (95.94%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKLPEV EKEFMRMAMLKHEETFKQQVHELHRLYR QKTLMKNMEK+RQSGWNPESWDK
Sbjct: 1   MEKLPEVYEKEFMRMAMLKHEETFKQQVHELHRLYRTQKTLMKNMEKSRQSGWNPESWDK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
           RNEICFRQIY+QDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINE ELELTLGP
Sbjct: 61  RNEICFRQIYKQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINEPELELTLGP 120

Query: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKKM 180
           SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQV KGQEMEVLGVIENSSGYQNGSHRGEKKM
Sbjct: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQV-KGQEMEVLGVIENSSGYQNGSHRGEKKM 180

Query: 181 MLDYPPWLFHVVSPNMT 198
           MLDYPPW+F VVSPNMT
Sbjct: 181 MLDYPPWIFQVVSPNMT 196

[Close]

BLAST of Carg18561 vs. NCBI nr
Match: KAG6594990.1 (Ribonuclease III domain-containing protein RNC1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 338.6 bits (867), Expect = 3.7e-89
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK
Sbjct: 48  MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 107

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
           RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP
Sbjct: 108 RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 167

Query: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHR 176
           SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHR
Sbjct: 168 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHR 222

[Close]

BLAST of Carg18561 vs. ExPASy TrEMBL
Match: A0A6J1HJS3 (uncharacterized protein LOC111463569 OS=Cucurbita moschata OX=3662 GN=LOC111463569 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.5e-101
Identity = 192/197 (97.46%), Postives = 193/197 (97.97%), Query Frame = 0


Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYR QKTLMKNMEKNRQSGWNPESWDK
Sbjct: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRTQKTLMKNMEKNRQSGWNPESWDK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
           RNEICFRQIYEQDAKTYYRSST HSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP
Sbjct: 61  RNEICFRQIYEQDAKTYYRSSTIHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120

Query: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKKM 180
           SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSH+GEKKM
Sbjct: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHKGEKKM 180

Query: 181 MLDYPPWLFHVVSPNMT 198
            LDYPPWLF VVSPNMT
Sbjct: 181 TLDYPPWLFQVVSPNMT 197

[Close]

BLAST of Carg18561 vs. ExPASy TrEMBL
Match: A0A6J1KXC4 (uncharacterized protein LOC111497211 OS=Cucurbita maxima OX=3661 GN=LOC111497211 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 8.0e-98
Identity = 189/197 (95.94%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKLPEV EKEFMRMAMLKHEETFKQQVHELHRLYR QKTLMKNMEK+RQSGWNPESWDK
Sbjct: 1   MEKLPEVYEKEFMRMAMLKHEETFKQQVHELHRLYRTQKTLMKNMEKSRQSGWNPESWDK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
           RNEICFRQIY+QDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINE ELELTLGP
Sbjct: 61  RNEICFRQIYKQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINEPELELTLGP 120

Query: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKKM 180
           SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQV KGQEMEVLGVIENSSGYQNGSHRGEKKM
Sbjct: 121 SSYNTSDSGVTHSSSSTGSSHEGRRRDSKQV-KGQEMEVLGVIENSSGYQNGSHRGEKKM 180

Query: 181 MLDYPPWLFHVVSPNMT 198
           MLDYPPW+F VVSPNMT
Sbjct: 181 MLDYPPWIFQVVSPNMT 196

[Close]

BLAST of Carg18561 vs. ExPASy TrEMBL
Match: A0A6J1GEC8 (uncharacterized protein LOC111453182 OS=Cucurbita moschata OX=3662 GN=LOC111453182 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.3e-76
Identity = 159/199 (79.90%), Postives = 176/199 (88.44%), Query Frame = 0


Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKLP+ +EKE+MRMAMLKHEETFKQQVHELHRLYR QKTLMKN+EK+R SGWNP+SWDK
Sbjct: 1   MEKLPKAHEKEYMRMAMLKHEETFKQQVHELHRLYRTQKTLMKNVEKSRDSGWNPKSWDK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
           RNEICFRQIYEQDAK Y R STT + K+DLEQPAE D+ E+++GALQ INENELELTLGP
Sbjct: 61  RNEICFRQIYEQDAKNYSR-STTQTTKLDLEQPAE-DEAEANNGALQIINENELELTLGP 120

Query: 121 SSYNTSDSGV-THSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKK 180
           SSYNTSDSG+ THSSSSTGSSHEGRR D KQV +GQEM VLGV EN SG+QNGS RGEKK
Sbjct: 121 SSYNTSDSGITTHSSSSTGSSHEGRRMDRKQV-RGQEMAVLGVPENPSGFQNGSDRGEKK 180

Query: 181 MM-LDYPPWLFHVVSPNMT 198
           M+ +DYPPWLF  VS NMT
Sbjct: 181 MVEVDYPPWLFQAVSLNMT 196

[Close]

BLAST of Carg18561 vs. ExPASy TrEMBL
Match: A0A6J1BU22 (uncharacterized protein LOC111005359 OS=Momordica charantia OX=3673 GN=LOC111005359 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.6e-74
Identity = 155/200 (77.50%), Postives = 173/200 (86.50%), Query Frame = 0


Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNR--QSGWNPESW 60
           MEKLP+  EKE+MRMAMLKHEETFKQQVHELHRLYR QKTLMKN+EK+R  Q+GWN ESW
Sbjct: 1   MEKLPKAYEKEYMRMAMLKHEETFKQQVHELHRLYRTQKTLMKNVEKSRQNQNGWNSESW 60

Query: 61  DKRNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTE-SSSGALQTINENELELT 120
           DKRNEICFRQIYEQDAK+YY+S  TH+ K+DLEQPAED++ E +++G LQ INENE+ELT
Sbjct: 61  DKRNEICFRQIYEQDAKSYYKS--THTTKLDLEQPAEDEEPEFNNNGVLQIINENEIELT 120

Query: 121 LGPSSYNTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGE 180
           LGPSSYNTSDSGVT SSSSTGSSHEGRR DSKQV KGQEMEVLG  E SSGYQN +   E
Sbjct: 121 LGPSSYNTSDSGVTLSSSSTGSSHEGRRGDSKQV-KGQEMEVLGATETSSGYQNNASNRE 180

Query: 181 KKMMLDYPPWLFHVVSPNMT 198
            + +LDYPPWLF VVS NMT
Sbjct: 181 DRKILDYPPWLFQVVSLNMT 197

[Close]

BLAST of Carg18561 vs. ExPASy TrEMBL
Match: A0A6J1IUL1 (uncharacterized protein LOC111478714 OS=Cucurbita maxima OX=3661 GN=LOC111478714 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.8e-73
Identity = 155/199 (77.89%), Postives = 173/199 (86.93%), Query Frame = 0


Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKLP+ +EKE+MRMAMLKHEETFKQQVHELHRLYR QKTLMKN+EK+R SGWN +SWDK
Sbjct: 1   MEKLPKAHEKEYMRMAMLKHEETFKQQVHELHRLYRTQKTLMKNVEKSRDSGWNTKSWDK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
           RNEICFRQIYEQDAK Y R STT + K+DLEQPAE D+ E+++GALQ INENELELTLGP
Sbjct: 61  RNEICFRQIYEQDAKNYSR-STTQTTKLDLEQPAE-DEAEANNGALQIINENELELTLGP 120

Query: 121 SSYNTSDSGV-THSSSSTGSSHEGRRRDSKQVLKGQEMEVLGVIENSSGYQNGSHRGEKK 180
           SSYNTSDSG+ THSSSSTGSSHEGRR D  QV + QEM VLGV EN SG+QNGS RGEKK
Sbjct: 121 SSYNTSDSGITTHSSSSTGSSHEGRRMDRNQV-RVQEMAVLGVPENPSGFQNGSDRGEKK 180

Query: 181 MM-LDYPPWLFHVVSPNMT 198
           M+ +DYPPWLF  VS N+T
Sbjct: 181 MVEVDYPPWLFQAVSLNLT 196

[Close]

BLAST of Carg18561 vs. TAIR 10
Match: AT5G67390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 2.3e-12
Identity = 63/181 (34.81%), Postives = 92/181 (50.83%), Query Frame = 0


Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKL    +K+ M+MAMLKHEETFKQQV+ELHRLY++QK LMKNME N+ +        K
Sbjct: 1   MEKLLNPYDKQCMKMAMLKHEETFKQQVYELHRLYQVQKILMKNMEINKFT-------TK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
            N +           T+ R      V  ++++PA        +  ++ ++E+E+ELTLGP
Sbjct: 61  NNHV------NSGLGTFIR-----RVDNEIDRPA---NFSGGNNNIEIMDESEIELTLGP 120

Query: 121 SSY-----------------------NTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEM 159
           S Y                       + +    + SSSSTGSS+       +QV + + M
Sbjct: 121 SCYGGDEMMRMNKKKKKNSLPEMMDGSLNSGRRSFSSSSTGSSNNNNNNLEEQVRQERMM 160

[Close]

BLAST of Carg18561 vs. TAIR 10
Match: AT5G67390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 186 Blast hits to 186 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 2.3e-12
Identity = 63/181 (34.81%), Postives = 92/181 (50.83%), Query Frame = 0


Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           MEKL    +K+ M+MAMLKHEETFKQQV+ELHRLY++QK LMKNME N+ +        K
Sbjct: 1   MEKLLNPYDKQCMKMAMLKHEETFKQQVYELHRLYQVQKILMKNMEINKFT-------TK 60

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTLGP 120
            N +           T+ R      V  ++++PA        +  ++ ++E+E+ELTLGP
Sbjct: 61  NNHV------NSGLGTFIR-----RVDNEIDRPA---NFSGGNNNIEIMDESEIELTLGP 120

Query: 121 SSY-----------------------NTSDSGVTHSSSSTGSSHEGRRRDSKQVLKGQEM 159
           S Y                       + +    + SSSSTGSS+       +QV + + M
Sbjct: 121 SCYGGDEMMRMNKKKKKNSLPEMMDGSLNSGRRSFSSSSTGSSNNNNNNLEEQVRQERMM 160

[Close]

BLAST of Carg18561 vs. TAIR 10
Match: AT1G26620.1 (Plant protein of unknown function (DUF863) )

HSP 1 Score: 50.4 bits (119), Expect = 1.9e-06
Identity = 23/38 (60.53%), Postives = 31/38 (81.58%), Query Frame = 0


Query: 9  EKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNME 47
          EK+FM+  ML+HE  FK QVHELHRLYR+QK L++ ++
Sbjct: 14 EKDFMKHTMLEHEAVFKNQVHELHRLYRVQKNLVEEVK 51

[Close]

BLAST of Carg18561 vs. TAIR 10
Match: AT5G57340.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 2.3e-04
Identity = 64/208 (30.77%), Postives = 84/208 (40.38%), Query Frame = 0


Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           M++  E    E +R  M   E+ FKQQV ELHR+Y  QK +M  + K+R   W   + D+
Sbjct: 72  MDRFLEKQNAESIRHTMQAQEDIFKQQVRELHRVYNTQKMMMTQL-KHRSQYWTVNNKDQ 131

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTL-- 120
                             R  T     IDLE      QT +       I E+ELELTL  
Sbjct: 132 PGS---------------RERTGSCSGIDLENVVRATQTTTDH-----IEESELELTLSI 191

Query: 121 GPSSYNTSDSGVTH------SSSSTGSSHEGRRRDSKQVL---KGQEMEVLGVIENSSGY 180
           G SS +T+ +  T+      S++S  SS +     S   L        E  G     S  
Sbjct: 192 GLSSSSTTMTTTTNKDMDYSSTTSMRSSSDNCNNQSNNNLYNNSNNNQESSGPNTPMSSS 251

Query: 181 QNGSHRGEKKMMLDYPPWLFHVVSPNMT 198
              S   EKK     P WLF  +S N T
Sbjct: 252 STTSLDREKKR----PHWLFQGLSINRT 254

[Close]

BLAST of Carg18561 vs. TAIR 10
Match: AT5G57340.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 2.3e-04
Identity = 64/208 (30.77%), Postives = 84/208 (40.38%), Query Frame = 0


Query: 1   MEKLPEVNEKEFMRMAMLKHEETFKQQVHELHRLYRIQKTLMKNMEKNRQSGWNPESWDK 60
           M++  E    E +R  M   E+ FKQQV ELHR+Y  QK +M  + K+R   W   + D+
Sbjct: 54  MDRFLEKQNAESIRHTMQAQEDIFKQQVRELHRVYNTQKMMMTQL-KHRSQYWTVNNKDQ 113

Query: 61  RNEICFRQIYEQDAKTYYRSSTTHSVKIDLEQPAEDDQTESSSGALQTINENELELTL-- 120
                             R  T     IDLE      QT +       I E+ELELTL  
Sbjct: 114 PGS---------------RERTGSCSGIDLENVVRATQTTTDH-----IEESELELTLSI 173

Query: 121 GPSSYNTSDSGVTH------SSSSTGSSHEGRRRDSKQVL---KGQEMEVLGVIENSSGY 180
           G SS +T+ +  T+      S++S  SS +     S   L        E  G     S  
Sbjct: 174 GLSSSSTTMTTTTNKDMDYSSTTSMRSSSDNCNNQSNNNLYNNSNNNQESSGPNTPMSSS 233

Query: 181 QNGSHRGEKKMMLDYPPWLFHVVSPNMT 198
              S   EKK     P WLF  +S N T
Sbjct: 234 STTSLDREKKR----PHWLFQGLSINRT 236

The following BLAST results are available for this feature:

BLAST of Carg18561 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026947.1	4.0e-104	100.00	hypothetical protein SDJN02_10955 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023517031.1	4.9e-102	98.48	uncharacterized protein LOC111780910 [Cucurbita pepo subsp. pepo]	[more]
XP_022963328.1	7.1e-101	97.46	uncharacterized protein LOC111463569 [Cucurbita moschata] >XP_022963329.1 unchar...	[more]
XP_023003698.1	1.6e-97	95.94	uncharacterized protein LOC111497211 [Cucurbita maxima] >XP_023003699.1 uncharac...	[more]
KAG6594990.1	3.7e-89	100.00	Ribonuclease III domain-containing protein RNC1, chloroplastic, partial [Cucurbi...	[more]

BLAST of Carg18561 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg18561 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJS3	3.5e-101	97.46	uncharacterized protein LOC111463569 OS=Cucurbita moschata OX=3662 GN=LOC1114635...	[more]
A0A6J1KXC4	8.0e-98	95.94	uncharacterized protein LOC111497211 OS=Cucurbita maxima OX=3661 GN=LOC111497211...	[more]
A0A6J1GEC8	2.3e-76	79.90	uncharacterized protein LOC111453182 OS=Cucurbita moschata OX=3662 GN=LOC1114531...	[more]
A0A6J1BU22	1.6e-74	77.50	uncharacterized protein LOC111005359 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1IUL1	1.8e-73	77.89	uncharacterized protein LOC111478714 OS=Cucurbita maxima OX=3661 GN=LOC111478714...	[more]

BLAST of Carg18561 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67390.1	2.3e-12	34.81	unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of un...	[more]
AT5G67390.2	2.3e-12	34.81	unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of un...	[more]
AT1G26620.1	1.9e-06	60.53	Plant protein of unknown function (DUF863)	[more]
AT5G57340.2	2.3e-04	30.77	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT5G57340.1	2.3e-04	30.77	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..152
None	No IPR available	PANTHER	PTHR33167	FAMILY NOT NAMED	coord: 7..197
None	No IPR available	PANTHER	PTHR33167:SF26	EXPRESSED PROTEIN	coord: 7..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18561-RA	Carg18561-RA	mRNA