Carg18503 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18503
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein RMD5 homolog
Location	Carg_Chr07: 2663692 .. 2664858 (-)
RNA-Seq Expression	Carg18503
Synteny	Carg18503

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTGGACAGCATTAAAGATGCATTTGATCGTGTGACGAAGAAGCAGAAATTATCTTCTTCCAAAAGTCATGAAGTAGTTGATCAAATTCATCTGGAACTGGAGCAGGTGCTACAAAAAATACAGTTGGCTGATAATCCTGAATGTCCAGTTGATCTGAAGTCGGTTTTTTCTGAACTCAAAACTAAATTAAAAGATATTGCCCCACTCACTCAGCTTGAAAGCACGCAGAAGGAGTTGAATACCGCTTTGACCAAGTATCCAAAGCTTGTTGAGAAATCTTTCAATCCAGATATATCGAAAGCTTATAGAAATGTTGATTTTGATAGGCATACTGTTAACCAGATTATTGCTAGTCATTTCTATCGTCAGGGTATGTTTGAACTTGGTGACTGCTTTATAAGTGAGGCTGGCGAATCAGAATCTGCTGCCTCGATGAGATCTCCATTTCAGGAAATGTATCAGATCCTTGAAGCCATGAAGTCCCGGAATCTAGACCCAGCTCTGAACTGGGCACTGAATAACTCAAATAAACTTAATGAATGTGGGTCAGATCTTTTGCTCAAACTTCATAGCATGCAGTTCATGGAGATTCTACAGAATGGAGATAGACATGACGCTTTGAAGTATGCTAGGACGTACCTGGCCCCTCTTGCATCAAACCACCTGGCTGAACTTCAGAAGCTTATGGCTTGCCTCTTGTGGACTGGAAGGCTTGATTGCTCCCCATATTCCCAATCACAATTATTGTCAGTAACCAATTGGGAAAAAGTTGCTGAGGAGCTTATAAGACAGTTCTGCAATTTTCTTGGTCAGTCCTACGAGAGCCCATTGGGCGTAACAGTTGCAGCAGGGGTCCAGGGCTTGCCTCCCCTCTTGAAATTTATGAATGTCATGGCTGGGAAGAAACAGGAATGGCAATCTATGAAGCAGTTGCCTGTGCCGGTGGAGTTGGGCAGAGAATTTCAGTTCCATTCCATCTTTGTTTGTCCGGTGTCAAAGGAACAGTCAACTGAAGAAAATCCACCAATGTTGATGCTGTGTGGACATGTCCTCTGTAAGCAGTCTATCATGAAGATGTCTAAAAACAGCACAAAATCGTTTAAGTGCCCGTATTGTCCTACAGACATCGATGCTACACGGTGTAGGCAATTGTACTTTTGA

mRNA sequence

ATGGAGTTGGACAGCATTAAAGATGCATTTGATCGTGTGACGAAGAAGCAGAAATTATCTTCTTCCAAAAGTCATGAAGTAGTTGATCAAATTCATCTGGAACTGGAGCAGGTGCTACAAAAAATACAGTTGGCTGATAATCCTGAATGTCCAGTTGATCTGAAGTCGGTTTTTTCTGAACTCAAAACTAAATTAAAAGATATTGCCCCACTCACTCAGCTTGAAAGCACGCAGAAGGAGTTGAATACCGCTTTGACCAAGTATCCAAAGCTTGTTGAGAAATCTTTCAATCCAGATATATCGAAAGCTTATAGAAATGTTGATTTTGATAGGCATACTGTTAACCAGATTATTGCTAGTCATTTCTATCGTCAGGGTATGTTTGAACTTGGTGACTGCTTTATAAGTGAGGCTGGCGAATCAGAATCTGCTGCCTCGATGAGATCTCCATTTCAGGAAATGTATCAGATCCTTGAAGCCATGAAGTCCCGGAATCTAGACCCAGCTCTGAACTGGGCACTGAATAACTCAAATAAACTTAATGAATGTGGGTCAGATCTTTTGCTCAAACTTCATAGCATGCAGTTCATGGAGATTCTACAGAATGGAGATAGACATGACGCTTTGAAGTATGCTAGGACGTACCTGGCCCCTCTTGCATCAAACCACCTGGCTGAACTTCAGAAGCTTATGGCTTGCCTCTTGTGGACTGGAAGGCTTGATTGCTCCCCATATTCCCAATCACAATTATTGTCAGTAACCAATTGGGAAAAAGTTGCTGAGGAGCTTATAAGACAGTTCTGCAATTTTCTTGGTCAGTCCTACGAGAGCCCATTGGGCGTAACAGTTGCAGCAGGGGTCCAGGGCTTGCCTCCCCTCTTGAAATTTATGAATGTCATGGCTGGGAAGAAACAGGAATGGCAATCTATGAAGCAGTTGCCTGTGCCGGTGGAGTTGGGCAGAGAATTTCAGTTCCATTCCATCTTTGTTTGTCCGGTGTCAAAGGAACAGTCAACTGAAGAAAATCCACCAATGTTGATGCTGTGTGGACATGTCCTCTGTAAGCAGTCTATCATGAAGATGTCTAAAAACAGCACAAAATCGTTTAAGTGCCCGTATTGTCCTACAGACATCGATGCTACACGGTGTAGGCAATTGTACTTTTGA

Coding sequence (CDS)

ATGGAGTTGGACAGCATTAAAGATGCATTTGATCGTGTGACGAAGAAGCAGAAATTATCTTCTTCCAAAAGTCATGAAGTAGTTGATCAAATTCATCTGGAACTGGAGCAGGTGCTACAAAAAATACAGTTGGCTGATAATCCTGAATGTCCAGTTGATCTGAAGTCGGTTTTTTCTGAACTCAAAACTAAATTAAAAGATATTGCCCCACTCACTCAGCTTGAAAGCACGCAGAAGGAGTTGAATACCGCTTTGACCAAGTATCCAAAGCTTGTTGAGAAATCTTTCAATCCAGATATATCGAAAGCTTATAGAAATGTTGATTTTGATAGGCATACTGTTAACCAGATTATTGCTAGTCATTTCTATCGTCAGGGTATGTTTGAACTTGGTGACTGCTTTATAAGTGAGGCTGGCGAATCAGAATCTGCTGCCTCGATGAGATCTCCATTTCAGGAAATGTATCAGATCCTTGAAGCCATGAAGTCCCGGAATCTAGACCCAGCTCTGAACTGGGCACTGAATAACTCAAATAAACTTAATGAATGTGGGTCAGATCTTTTGCTCAAACTTCATAGCATGCAGTTCATGGAGATTCTACAGAATGGAGATAGACATGACGCTTTGAAGTATGCTAGGACGTACCTGGCCCCTCTTGCATCAAACCACCTGGCTGAACTTCAGAAGCTTATGGCTTGCCTCTTGTGGACTGGAAGGCTTGATTGCTCCCCATATTCCCAATCACAATTATTGTCAGTAACCAATTGGGAAAAAGTTGCTGAGGAGCTTATAAGACAGTTCTGCAATTTTCTTGGTCAGTCCTACGAGAGCCCATTGGGCGTAACAGTTGCAGCAGGGGTCCAGGGCTTGCCTCCCCTCTTGAAATTTATGAATGTCATGGCTGGGAAGAAACAGGAATGGCAATCTATGAAGCAGTTGCCTGTGCCGGTGGAGTTGGGCAGAGAATTTCAGTTCCATTCCATCTTTGTTTGTCCGGTGTCAAAGGAACAGTCAACTGAAGAAAATCCACCAATGTTGATGCTGTGTGGACATGTCCTCTGTAAGCAGTCTATCATGAAGATGTCTAAAAACAGCACAAAATCGTTTAAGTGCCCGTATTGTCCTACAGACATCGATGCTACACGGTGTAGGCAATTGTACTTTTGA

Protein sequence

MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSELKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIASHFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKLNECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRLDCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVMAGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF

Homology

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BLAST of Carg18503 vs. NCBI nr
Match: XP_022963019.1 (protein RMD5 homolog [Cucurbita moschata] >XP_022963020.1 protein RMD5 homolog [Cucurbita moschata] >XP_022963021.1 protein RMD5 homolog [Cucurbita moschata] >XP_022963022.1 protein RMD5 homolog [Cucurbita moschata] >XP_022963023.1 protein RMD5 homolog [Cucurbita moschata] >XP_023517860.1 protein RMD5 homolog [Cucurbita pepo subsp. pepo] >XP_023517861.1 protein RMD5 homolog [Cucurbita pepo subsp. pepo] >XP_023517862.1 protein RMD5 homolog [Cucurbita pepo subsp. pepo] >KAG7026890.1 Protein RMD5-like A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 778.1 bits (2008), Expect = 3.6e-221
Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60
           MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180
           HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180

Query: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240
           NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL
Sbjct: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240

Query: 241 DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Carg18503 vs. NCBI nr
Match: XP_023003688.1 (protein RMD5 homolog [Cucurbita maxima] >XP_023003689.1 protein RMD5 homolog [Cucurbita maxima] >XP_023003690.1 protein RMD5 homolog [Cucurbita maxima] >XP_023003691.1 protein RMD5 homolog [Cucurbita maxima])

HSP 1 Score: 774.2 bits (1998), Expect = 5.2e-220
Identity = 386/388 (99.48%), Postives = 387/388 (99.74%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60
           MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPV+LKSVFSE
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVNLKSVFSE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180
           HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180

Query: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240
           NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL
Sbjct: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240

Query: 241 DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYSQSQLLSVTNWE VAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSQSQLLSVTNWENVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

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BLAST of Carg18503 vs. NCBI nr
Match: KAG6594927.1 (Protein RMD5-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 767.3 bits (1980), Expect = 6.3e-218
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60
           MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180
           HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180

Query: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240
           NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL
Sbjct: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240

Query: 241 DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRC 384
           MSKNSTKSFKCPYCPTDIDATRC
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRC 383

[Close]

BLAST of Carg18503 vs. NCBI nr
Match: XP_022132999.1 (protein RMD5 homolog A-like [Momordica charantia] >XP_022133000.1 protein RMD5 homolog A-like [Momordica charantia])

HSP 1 Score: 752.3 bits (1941), Expect = 2.1e-213
Identity = 371/388 (95.62%), Postives = 380/388 (97.94%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60
           MELDSIKD FDRVTKKQKLSSSKS EV+DQIHLELEQVLQK+QLADNPECP+DL SVFSE
Sbjct: 1   MELDSIKDVFDRVTKKQKLSSSKSQEVIDQIHLELEQVLQKVQLADNPECPIDLNSVFSE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELN AL+KYPKL+EKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNVALSKYPKLIEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180
           HFYRQGMFELGDCFI+EAGESESAASMRSPFQEMYQILEAMKSRNL+PALNWALNNS+KL
Sbjct: 121 HFYRQGMFELGDCFINEAGESESAASMRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180

Query: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240
            ECGSDLLLKLHSMQFMEILQ GDRHDALKYARTYLAPLASNH+AELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYSQSQLLS TNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSQSQLLSATNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVEL REFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Carg18503 vs. NCBI nr
Match: XP_008440495.1 (PREDICTED: protein RMD5 homolog A [Cucumis melo] >XP_008440496.1 PREDICTED: protein RMD5 homolog A [Cucumis melo] >KAA0036368.1 protein RMD5-like protein A [Cucumis melo var. makuwa] >TYK12763.1 protein RMD5-like protein A [Cucumis melo var. makuwa])

HSP 1 Score: 750.0 bits (1935), Expect = 1.0e-212
Identity = 371/388 (95.62%), Postives = 380/388 (97.94%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60
           MELDSIKDAFDRVTKKQKLSSSKS EVVD+IHLELEQVLQKIQLADNPECP+DL SVF+E
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDRIHLELEQVLQKIQLADNPECPIDLNSVFAE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQL+STQKELN ALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLDSTQKELNAALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180
           HFYRQGMFELGDCFISEAGESESAAS+RSPFQEMYQILE+MKSRNL+PALNWALNNSNKL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180

Query: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240
            ECGSDLLLKLHSMQFMEILQ GDRHDALKYARTYLAPLASNH+AELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYS SQLLSV NW+KVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVEL REFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Carg18503 vs. ExPASy Swiss-Prot
Match: Q9T075 (Protein RMD5 homolog OS=Arabidopsis thaliana OX=3702 GN=RMD5 PE=1 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 8.2e-128
Identity = 232/392 (59.18%), Postives = 300/392 (76.53%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECP-VDLKSVFS 60
           MEL SIKDAFDRV  KQKLS SK++E+V  +  E+++ L  ++   + +   +D +S+ +
Sbjct: 1   MELKSIKDAFDRVATKQKLSYSKTNEIVHMLSQEIDKALSILEETPSSDTMLLDHRSILA 60

Query: 61  ELKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYR-NVDFDRHTVNQII 120
           ++K    +IAP+TQLE+T+KEL+ ALTKYPK++EK  NPDISKAYR NV+FD H VNQII
Sbjct: 61  DVKKVFMEIAPITQLEATEKELHAALTKYPKVLEKQLNPDISKAYRHNVEFDTHIVNQII 120

Query: 121 ASHFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSN 180
           A+ FYRQGMF++GDCF++E GESE   S R  F EMY+ILEAMK R+L+PALNWA++NS+
Sbjct: 121 ANFFYRQGMFDIGDCFVAETGESE--CSTRQSFVEMYRILEAMKRRDLEPALNWAVSNSD 180

Query: 181 KLNECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTG 240
           KL E  SDL +KLHS+ F+EI +  +  +A+ YAR ++A  A + L E+QKLM  LLW  
Sbjct: 181 KLKEARSDLEMKLHSLHFLEIARGKNSKEAIDYARKHIATFADSCLPEIQKLMCSLLWNR 240

Query: 241 RLDCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMN 300
           +LD SPY  S+ LS   W    +EL RQ+CN LG+S ESPL +TV AG Q LP LLK+MN
Sbjct: 241 KLDKSPY--SEFLSPALWNNAVKELTRQYCNLLGESSESPLSITVTAGTQALPVLLKYMN 300

Query: 301 -VMAGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQS 360
            VMA KK +WQ+M+QLPV  +L  EFQFHS+FVCPVSKEQS+++NPPM+M CGHVLCKQ+
Sbjct: 301 VVMANKKLDWQTMEQLPVDAQLSEEFQFHSVFVCPVSKEQSSDDNPPMMMSCGHVLCKQT 360

Query: 361 IMKMSKNSTK-SFKCPYCPTDIDATRCRQLYF 389
           I KMSKN +K SFKCPYCPTD+D +RCRQL+F
Sbjct: 361 INKMSKNGSKSSFKCPYCPTDVDISRCRQLHF 388

[Close]

BLAST of Carg18503 vs. ExPASy Swiss-Prot
Match: O59668 (LisH domain-containing protein C29A3.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC29A3.03c PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.6e-52
Identity = 121/366 (33.06%), Postives = 192/366 (52.46%), Query Frame = 0


Query: 55  KSVFSELKTKLKDIAPLTQ--------LESTQKELNTALTKYPKLVEKSFNPDIS--KAY 114
           KS   +  T +K++   ++        L+ T+K+ +T+L ++ K +EK FN D+   K +
Sbjct: 34  KSCLKDPTTSMKELVACSEKTQQVFDDLKRTEKKFHTSLNRFGKTLEKKFNFDLEDIKLH 93

Query: 115 RNVDFDRHTVNQIIASHFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSR 174
            + +  +  ++  ++ HF+RQG  EL   F  EAG  E + S+   F  +  I++ ++ +
Sbjct: 94  SSFESKKREIDTALSLHFFRQGDVELAHLFCKEAGIEEPSESLH-VFTLLKSIVQGIRDK 153

Query: 175 NLDPALNWALNNSNKLNECGSDLLLKLHSMQFM-EILQNGDRHDALKYARTYLAPLASNH 234
           +L   + WA      L   GS L   L   + +   L   D   A++Y RT +A     H
Sbjct: 154 DLKLPIEWASQCRGYLERKGSSLEYTLQKYRLVSNYLTTKDIMAAIRYCRTNMAEFQKKH 213

Query: 235 LAELQKLMACLLWTGRLDCSP------------YSQSQLLSV---------TNWEKVAEE 294
           LA++QK M  L +  R +                S +  L++          +W+ +   
Sbjct: 214 LADIQKTMIALFFCSRNEVLSGTNDSHDSIHHIISNNAQLNIPQEYIDVLDLDWKSLELL 273

Query: 295 LIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVMAGKKQEWQSMKQLPVPVELGRE 354
            +R+FC  LG S ESPL + V AG   LP LLK  ++M  K  EW S  +LPV + L   
Sbjct: 274 FVREFCAALGMSLESPLDIVVNAGAIALPILLKMSSIMKKKHTEWTSQGELPVEIFLPSS 333

Query: 355 FQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATR 389
           + FHS+F CPVSKEQ+TEENPPM+M CGHV+ K+S+ ++S+N ++ FKCPYCP +  A  
Sbjct: 334 YHFHSVFTCPVSKEQATEENPPMMMSCGHVIVKESLRQLSRNGSQRFKCPYCPNENVAAD 393

[Close]

BLAST of Carg18503 vs. ExPASy Swiss-Prot
Match: Q640V2 (E3 ubiquitin-protein ligase RMND5A OS=Xenopus tropicalis OX=8364 GN=rmnd5a PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 9.6e-52
Identity = 116/343 (33.82%), Postives = 198/343 (57.73%), Query Frame = 0


Query: 54  LKSVFSELKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRN---VDFD 113
           L  V ++   ++KD   + +L S  K++++++++  K ++K+F+ DIS    +    +  
Sbjct: 57  LSLVLTQCCKRIKD--TVQKLASDHKDIHSSVSRVGKAIDKNFDADISSVGIDGCWQNDS 116

Query: 114 RHTVNQIIASHFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPAL 173
           +  +++++  HF+RQGM ++ +    EAG S   AS + PF E+ +ILEA+K R L PAL
Sbjct: 117 QQILSEVMVEHFFRQGMLDVAEELCQEAGLSID-ASQKEPFVELNRILEALKVRVLRPAL 176

Query: 174 NWALNNSNKLNECGSDLLLKLHSMQFMEILQNG--DRHDALKYARTYLAPLASNHLAELQ 233
            WA++N   L    S L  KLH + F+ +L  G  ++ +AL+YA+ +  P A NH  ++Q
Sbjct: 177 EWAVSNREMLMAQNSSLEFKLHRLYFISLLMGGTVNQREALQYAKNF-QPFAENHQKDIQ 236

Query: 234 KLMACLLWTGR-LDCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGV 293
            LM  L++  + ++ SPY    LL    W  + +   R  C  LG S ESPL V+ +AG 
Sbjct: 237 VLMGSLVYLRQGIENSPY--VHLLDANQWADICDIFTRDACALLGLSVESPLSVSFSAGC 296

Query: 294 QGLPPLLKFMNVMAGKK--QEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPM 353
             LP L+    V+  ++    W    +LP+ V+LG++  +HSIF CP+ ++Q+T+ NPPM
Sbjct: 297 VALPALINIKAVIEQRQCTGVWNQKDELPIEVDLGKKCWYHSIFACPILRQQTTDNNPPM 356

Query: 354 LMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
            ++CGH++ + ++ KM   S    KCPYCP +      +Q++F
Sbjct: 357 KLVCGHIISRDALNKMFNGS--KLKCPYCPMEQSPGDAKQIFF 391

[Close]

BLAST of Carg18503 vs. ExPASy Swiss-Prot
Match: Q6GLP4 (E3 ubiquitin-protein ligase RMND5A OS=Xenopus laevis OX=8355 GN=rmnd5a PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.3e-51
Identity = 123/381 (32.28%), Postives = 211/381 (55.38%), Query Frame = 0


Query: 18  KLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSELKTKLKDIAPLTQLEST 77
           +L      E++D       ++LQ  +   + E    L  V ++   ++KD   + +L S 
Sbjct: 23  QLCERSLEELIDYAGGLRREILQAAE--QDGELSGTLSLVLTQCCKRIKD--TVQKLASD 82

Query: 78  QKELNTALTKYPKLVEKSFNPDISKAYRNVD-----FDRHTVNQIIASHFYRQGMFELGD 137
            K++++++++  K ++K+F+ DIS     +D       +  +++++  HF+RQGM ++ +
Sbjct: 83  HKDIHSSVSRVGKAIDKNFDADISSV--GIDGCWQTDSQRILSEVMVEHFFRQGMLDVAE 142

Query: 138 CFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKLNECGSDLLLKLH 197
               EA  S   AS + PF E+ +ILEA+K R L PAL WA++N   L    S L  KLH
Sbjct: 143 ELCQEASLSID-ASQKEPFVELNRILEALKVRVLRPALEWAVSNREMLMAQNSSLEFKLH 202

Query: 198 SMQFMEILQNG--DRHDALKYARTYLAPLASNHLAELQKLMACLLWTGR-LDCSPYSQSQ 257
            + F+ +L  G  ++ +AL+YA+ +  P A NH  ++Q LM  L++  + ++ SPY    
Sbjct: 203 RLYFISLLMGGTVNQQEALQYAKNF-QPFAENHQKDIQVLMGSLVYLRQGIENSPY--VH 262

Query: 258 LLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVMAGKKQE--W 317
           LL    W  + +   R  C+ LG S ESPL V+ +AG   LP L+    V+  ++    W
Sbjct: 263 LLDANQWADICDIFTRDACSLLGLSVESPLSVSFSAGCVALPALINIKAVIEQRQCSGVW 322

Query: 318 QSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMKMSKNSTK 377
               +LP+ V+LG++  +HSIF CP+ ++Q+TE NPPM ++CGH++ + ++ KM   S  
Sbjct: 323 NQKDELPIEVDLGKKCWYHSIFACPILRQQTTENNPPMKLVCGHIISRDALNKMFNGS-- 382

Query: 378 SFKCPYCPTDIDATRCRQLYF 389
             KCPYCP +      +Q++F
Sbjct: 383 KLKCPYCPMEQSPGDAKQIFF 391

[Close]

BLAST of Carg18503 vs. ExPASy Swiss-Prot
Match: Q9H871 (E3 ubiquitin-protein transferase RMND5A OS=Homo sapiens OX=9606 GN=RMND5A PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.8e-51
Identity = 116/345 (33.62%), Postives = 197/345 (57.10%), Query Frame = 0


Query: 54  LKSVFSELKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVD----- 113
           L  V ++   ++KD   + +L S  K++++++++  K ++K+F+ DIS     +D     
Sbjct: 57  LSLVLTQCCKRIKD--TVQKLASDHKDIHSSVSRVGKAIDKNFDSDISSV--GIDGCWQA 116

Query: 114 FDRHTVNQIIASHFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDP 173
             +  +N+++  HF+RQGM ++ +    E+G S    S + PF E+ +ILEA+K R L P
Sbjct: 117 DSQRLLNEVMVEHFFRQGMLDVAEELCQESGLSVD-PSQKEPFVELNRILEALKVRVLRP 176

Query: 174 ALNWALNNSNKLNECGSDLLLKLHSMQFMEILQNG--DRHDALKYARTYLAPLASNHLAE 233
           AL WA++N   L    S L  KLH + F+ +L  G  ++ +AL+YA+ +  P A NH  +
Sbjct: 177 ALEWAVSNREMLIAQNSSLEFKLHRLYFISLLMGGTTNQREALQYAKNF-QPFALNHQKD 236

Query: 234 LQKLMACLLWTGR-LDCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAA 293
           +Q LM  L++  + ++ SPY    LL    W  + +   R  C  LG S ESPL V+ +A
Sbjct: 237 IQVLMGSLVYLRQGIENSPY--VHLLDANQWADICDIFTRDACALLGLSVESPLSVSFSA 296

Query: 294 GVQGLPPLLKFMNVMAGKK--QEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENP 353
           G   LP L+    V+  ++    W    +LP+ V+LG++  +HSIF CP+ ++Q+T+ NP
Sbjct: 297 GCVALPALINIKAVIEQRQCTGVWNQKDELPIEVDLGKKCWYHSIFACPILRQQTTDNNP 356

Query: 354 PMLMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           PM ++CGH++ + ++ KM   S    KCPYCP +      +Q++F
Sbjct: 357 PMKLVCGHIISRDALNKMFNGS--KLKCPYCPMEQSPGDAKQIFF 391

[Close]

BLAST of Carg18503 vs. ExPASy TrEMBL
Match: A0A6J1HGI0 (protein RMD5 homolog OS=Cucurbita moschata OX=3662 GN=LOC111463351 PE=4 SV=1)

HSP 1 Score: 778.1 bits (2008), Expect = 1.7e-221
Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60
           MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180
           HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180

Query: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240
           NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL
Sbjct: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240

Query: 241 DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Carg18503 vs. ExPASy TrEMBL
Match: A0A6J1KU15 (protein RMD5 homolog OS=Cucurbita maxima OX=3661 GN=LOC111497206 PE=4 SV=1)

HSP 1 Score: 774.2 bits (1998), Expect = 2.5e-220
Identity = 386/388 (99.48%), Postives = 387/388 (99.74%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60
           MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPV+LKSVFSE
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVNLKSVFSE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180
           HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180

Query: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240
           NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL
Sbjct: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240

Query: 241 DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYSQSQLLSVTNWE VAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSQSQLLSVTNWENVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Carg18503 vs. ExPASy TrEMBL
Match: A0A6J1BU35 (protein RMD5 homolog A-like OS=Momordica charantia OX=3673 GN=LOC111005703 PE=4 SV=1)

HSP 1 Score: 752.3 bits (1941), Expect = 1.0e-213
Identity = 371/388 (95.62%), Postives = 380/388 (97.94%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60
           MELDSIKD FDRVTKKQKLSSSKS EV+DQIHLELEQVLQK+QLADNPECP+DL SVFSE
Sbjct: 1   MELDSIKDVFDRVTKKQKLSSSKSQEVIDQIHLELEQVLQKVQLADNPECPIDLNSVFSE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELN AL+KYPKL+EKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNVALSKYPKLIEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180
           HFYRQGMFELGDCFI+EAGESESAASMRSPFQEMYQILEAMKSRNL+PALNWALNNS+KL
Sbjct: 121 HFYRQGMFELGDCFINEAGESESAASMRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180

Query: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240
            ECGSDLLLKLHSMQFMEILQ GDRHDALKYARTYLAPLASNH+AELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYSQSQLLS TNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSQSQLLSATNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVEL REFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Carg18503 vs. ExPASy TrEMBL
Match: A0A1S3B0U3 (protein RMD5 homolog A OS=Cucumis melo OX=3656 GN=LOC103484906 PE=4 SV=1)

HSP 1 Score: 750.0 bits (1935), Expect = 5.0e-213
Identity = 371/388 (95.62%), Postives = 380/388 (97.94%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60
           MELDSIKDAFDRVTKKQKLSSSKS EVVD+IHLELEQVLQKIQLADNPECP+DL SVF+E
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDRIHLELEQVLQKIQLADNPECPIDLNSVFAE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQL+STQKELN ALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLDSTQKELNAALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180
           HFYRQGMFELGDCFISEAGESESAAS+RSPFQEMYQILE+MKSRNL+PALNWALNNSNKL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180

Query: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240
            ECGSDLLLKLHSMQFMEILQ GDRHDALKYARTYLAPLASNH+AELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYS SQLLSV NW+KVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVEL REFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Carg18503 vs. ExPASy TrEMBL
Match: A0A5D3CLJ0 (Protein RMD5-like protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003520 PE=4 SV=1)

HSP 1 Score: 750.0 bits (1935), Expect = 5.0e-213
Identity = 371/388 (95.62%), Postives = 380/388 (97.94%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60
           MELDSIKDAFDRVTKKQKLSSSKS EVVD+IHLELEQVLQKIQLADNPECP+DL SVF+E
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDRIHLELEQVLQKIQLADNPECPIDLNSVFAE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQL+STQKELN ALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLDSTQKELNAALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180
           HFYRQGMFELGDCFISEAGESESAAS+RSPFQEMYQILE+MKSRNL+PALNWALNNSNKL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180

Query: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTGRL 240
            ECGSDLLLKLHSMQFMEILQ GDRHDALKYARTYLAPLASNH+AELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300
           DCSPYS SQLLSV NW+KVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM
Sbjct: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVEL REFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Carg18503 vs. TAIR 10
Match: AT4G37880.1 (LisH/CRA/RING-U-box domains-containing protein )

HSP 1 Score: 458.4 bits (1178), Expect = 5.8e-129
Identity = 232/392 (59.18%), Postives = 300/392 (76.53%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECP-VDLKSVFS 60
           MEL SIKDAFDRV  KQKLS SK++E+V  +  E+++ L  ++   + +   +D +S+ +
Sbjct: 1   MELKSIKDAFDRVATKQKLSYSKTNEIVHMLSQEIDKALSILEETPSSDTMLLDHRSILA 60

Query: 61  ELKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYR-NVDFDRHTVNQII 120
           ++K    +IAP+TQLE+T+KEL+ ALTKYPK++EK  NPDISKAYR NV+FD H VNQII
Sbjct: 61  DVKKVFMEIAPITQLEATEKELHAALTKYPKVLEKQLNPDISKAYRHNVEFDTHIVNQII 120

Query: 121 ASHFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSN 180
           A+ FYRQGMF++GDCF++E GESE   S R  F EMY+ILEAMK R+L+PALNWA++NS+
Sbjct: 121 ANFFYRQGMFDIGDCFVAETGESE--CSTRQSFVEMYRILEAMKRRDLEPALNWAVSNSD 180

Query: 181 KLNECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNHLAELQKLMACLLWTG 240
           KL E  SDL +KLHS+ F+EI +  +  +A+ YAR ++A  A + L E+QKLM  LLW  
Sbjct: 181 KLKEARSDLEMKLHSLHFLEIARGKNSKEAIDYARKHIATFADSCLPEIQKLMCSLLWNR 240

Query: 241 RLDCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMN 300
           +LD SPY  S+ LS   W    +EL RQ+CN LG+S ESPL +TV AG Q LP LLK+MN
Sbjct: 241 KLDKSPY--SEFLSPALWNNAVKELTRQYCNLLGESSESPLSITVTAGTQALPVLLKYMN 300

Query: 301 -VMAGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQS 360
            VMA KK +WQ+M+QLPV  +L  EFQFHS+FVCPVSKEQS+++NPPM+M CGHVLCKQ+
Sbjct: 301 VVMANKKLDWQTMEQLPVDAQLSEEFQFHSVFVCPVSKEQSSDDNPPMMMSCGHVLCKQT 360

Query: 361 IMKMSKNSTK-SFKCPYCPTDIDATRCRQLYF 389
           I KMSKN +K SFKCPYCPTD+D +RCRQL+F
Sbjct: 361 INKMSKNGSKSSFKCPYCPTDVDISRCRQLHF 388

[Close]

BLAST of Carg18503 vs. TAIR 10
Match: AT2G22690.1 (zinc ion binding )

HSP 1 Score: 437.2 bits (1123), Expect = 1.4e-122
Identity = 222/390 (56.92%), Postives = 290/390 (74.36%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60
           MEL ++KDAFDRVTKKQKL  SK+HEVVD++  E+++ L+ IQ  DN E      SV ++
Sbjct: 1   MELKNVKDAFDRVTKKQKLCYSKTHEVVDKMSQEIDKALKTIQ-EDNHE------SVVAD 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LK   ++IAP+  LE++QKE+N  LTKYPK ++K+ NPDIS AYRNV FD HTV+QI+A 
Sbjct: 61  LKKTFEEIAPINLLEASQKEINGVLTKYPKALDKTLNPDISTAYRNVKFDTHTVHQILAQ 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180
            FYRQGM+++GDCFISE GE +  +S+   F EM  ILEAMK R+L PAL W  +NS+KL
Sbjct: 121 FFYRQGMYDVGDCFISETGEVKPESSVTKAFMEMNMILEAMKERDLGPALKWVASNSDKL 180

Query: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNH--LAELQKLMACLLWTG 240
            E  SDL LKLHS+ F+EI ++    +A+ YAR + A  +++     E+QKLM  LLW  
Sbjct: 181 KEAKSDLELKLHSLHFLEIAKDKTSEEAINYARKHFATYSADSCCFPEIQKLMCSLLWIR 240

Query: 241 RLDCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMN 300
            L+ SPY  S+ LS   W   A+EL RQ+C  LG+S ESPL VTVAAG Q LP  LK++N
Sbjct: 241 NLNKSPY--SEFLSPVLWTNAAKELTRQYCILLGESPESPLSVTVAAGSQVLPTFLKYLN 300

Query: 301 VMAGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSI 360
           V+  K++EWQ+M+QL VPVEL  E++F+S+FVCPVSKE S+E+NPPM + CGHVLCKQSI
Sbjct: 301 VLPEKRKEWQTMEQLLVPVELSEEYRFYSVFVCPVSKEHSSEDNPPMRLACGHVLCKQSI 360

Query: 361 MKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
            +MS+N ++SFKCPYCPTDIDA++C+QLYF
Sbjct: 361 NRMSRNGSRSFKCPYCPTDIDASQCKQLYF 381

[Close]

BLAST of Carg18503 vs. TAIR 10
Match: AT2G22690.2 (zinc ion binding )

HSP 1 Score: 437.2 bits (1123), Expect = 1.4e-122
Identity = 222/390 (56.92%), Postives = 290/390 (74.36%), Query Frame = 0


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSE 60
           MEL ++KDAFDRVTKKQKL  SK+HEVVD++  E+++ L+ IQ  DN E      SV ++
Sbjct: 1   MELKNVKDAFDRVTKKQKLCYSKTHEVVDKMSQEIDKALKTIQ-EDNHE------SVVAD 60

Query: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120
           LK   ++IAP+  LE++QKE+N  LTKYPK ++K+ NPDIS AYRNV FD HTV+QI+A 
Sbjct: 61  LKKTFEEIAPINLLEASQKEINGVLTKYPKALDKTLNPDISTAYRNVKFDTHTVHQILAQ 120

Query: 121 HFYRQGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKL 180
            FYRQGM+++GDCFISE GE +  +S+   F EM  ILEAMK R+L PAL W  +NS+KL
Sbjct: 121 FFYRQGMYDVGDCFISETGEVKPESSVTKAFMEMNMILEAMKERDLGPALKWVASNSDKL 180

Query: 181 NECGSDLLLKLHSMQFMEILQNGDRHDALKYARTYLAPLASNH--LAELQKLMACLLWTG 240
            E  SDL LKLHS+ F+EI ++    +A+ YAR + A  +++     E+QKLM  LLW  
Sbjct: 181 KEAKSDLELKLHSLHFLEIAKDKTSEEAINYARKHFATYSADSCCFPEIQKLMCSLLWIR 240

Query: 241 RLDCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMN 300
            L+ SPY  S+ LS   W   A+EL RQ+C  LG+S ESPL VTVAAG Q LP  LK++N
Sbjct: 241 NLNKSPY--SEFLSPVLWTNAAKELTRQYCILLGESPESPLSVTVAAGSQVLPTFLKYLN 300

Query: 301 VMAGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSI 360
           V+  K++EWQ+M+QL VPVEL  E++F+S+FVCPVSKE S+E+NPPM + CGHVLCKQSI
Sbjct: 301 VLPEKRKEWQTMEQLLVPVELSEEYRFYSVFVCPVSKEHSSEDNPPMRLACGHVLCKQSI 360

Query: 361 MKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
            +MS+N ++SFKCPYCPTDIDA++C+QLYF
Sbjct: 361 NRMSRNGSRSFKCPYCPTDIDASQCKQLYF 381

[Close]

BLAST of Carg18503 vs. TAIR 10
Match: AT5G09630.1 (LisH/CRA/RING-U-box domains-containing protein )

HSP 1 Score: 360.1 bits (923), Expect = 2.2e-99
Identity = 185/387 (47.80%), Postives = 273/387 (70.54%), Query Frame = 0


Query: 5   SIKDAFDRVTKKQKLSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSELKTK 64
           +++DAFDRV+KKQKL  S + +V+D +   ++  L +IQL ++    V+ +SV +EL+ K
Sbjct: 8   TVRDAFDRVSKKQKLYHSVTQDVIDLVCDGIQDTLTRIQLGNDD--GVEPESVLTELRRK 67

Query: 65  LKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIASHFYR 124
           L  + P+ QL+ + KE   +L+K  KL+E S++PDIS A  +VDFD + VN+I+  H YR
Sbjct: 68  LDALLPIIQLQKSHKETKWSLSKLVKLLEVSYHPDISLACFSVDFDINLVNKILIHHCYR 127

Query: 125 QGMFELGDCFISEAGESESAASMRSPFQEMYQILEAMKSRNLDPALNWALNNSNKLNECG 184
           +G+F++GDC + EAG  E    +RS F E +QI++++K RN++PA+ W   N  KL +  
Sbjct: 128 EGLFDVGDCLVKEAGREEE-TEVRSQFLEFHQIVDSLKLRNIEPAMRWIFANRGKLKQKS 187

Query: 185 SDLLLKLHSMQFMEILQNGDRHDALKYARTYLA--PLASNHLAELQKLMACLLWTGRLDC 244
           S L  KL S+++ +IL+ G   DAL+YART+    PL   H  E+QKL+ CLLW G  + 
Sbjct: 188 SKLEFKLLSLKYCDILREGKSDDALEYARTHFTQYPL---HFKEIQKLITCLLWIGNFEK 247

Query: 245 SPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVMAG 304
           SPY  ++++S + W+KV +ELI ++ + L Q   SPL V ++AG + LP LLK +++MA 
Sbjct: 248 SPY--AEIVSPSCWDKVTKELIMEYHHLLDQPINSPLKVALSAGYESLPSLLKLVHLMAL 307

Query: 305 KKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMKMS 364
            KQEWQ+MKQLPVP+ELG E++FHS FVCPVS++QS+EENPPM + CGHV+ KQS+M++S
Sbjct: 308 TKQEWQAMKQLPVPLELGNEYKFHSAFVCPVSRDQSSEENPPMQLPCGHVISKQSMMRLS 367

Query: 365 KN-STKSFKCPYCPTDIDATRCRQLYF 389
           KN + ++FKCPYCP +  A+ CRQLYF
Sbjct: 368 KNCAFRTFKCPYCPAETLASACRQLYF 386

[Close]

BLAST of Carg18503 vs. TAIR 10
Match: AT3G55070.1 (LisH/CRA/RING-U-box domains-containing protein )

HSP 1 Score: 99.0 bits (245), Expect = 9.0e-21
Identity = 87/382 (22.77%), Postives = 174/382 (45.55%), Query Frame = 0


Query: 19  LSSSKSHEVVDQIHLELEQVLQKIQLADNPECPVDLKSVFSELKTKLKDIAPLTQLESTQ 78
           +SSS+S++  + + LE  Q+L+            + +S   E+ T +  +  L   + ++
Sbjct: 29  VSSSRSNQFTESLKLE-HQLLRVPFEHYKKTIRTNHRSFEKEVSTIVNGVGELADSDWSK 88

Query: 79  KE-------LNTALTKYPKLVEKSFNPDISKAYR---------NVDFDRHT------VNQ 138
            +       L T L    + +E+  N +  +A R         +VD +  T      + +
Sbjct: 89  DDTVSRLTCLVTRLQGLKRKLEEGSNVENLQAQRCRARIDHLDSVDVENITEWNNTKLKR 148

Query: 139 IIASHFYRQGMFELGDCFISEAGESESAASM--RSPFQEMYQILEAMKSRNLDPALNWAL 198
           I+  +  R   FE      ++  ES +   +     F+E  ++++A+K+R +  AL W  
Sbjct: 149 ILVDYMLRMSYFETA----TKLSESSNIMDLVDIDIFREAKKVIDALKNREVASALTWCA 208

Query: 199 NNSNKLNECGSDLLLKLHSMQFMEILQNGDRHD---ALKYARTYLAPLASNHLAELQKLM 258
           +N  +L +  S    +L   +F+E+++         A++YAR +LA   + H+ ELQ ++
Sbjct: 209 DNKTRLKKSKSKFEFQLRLQEFIELVRVDTAESYKKAIQYARKHLASWGTTHMKELQHVL 268

Query: 259 ACLLWTGRLDCSPYSQSQLLSVTNWEKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGL- 318
           A L +    +CS Y    L  +  W+ + ++  ++FC   G + E  L + + AG+  L 
Sbjct: 269 ATLAFKSTTECSKY--KVLFELRQWDVLVDQFKQEFCKLYGMTMEPLLNIYLQAGLSALK 328

Query: 319 PPLLKFMNVMAGKKQEWQSMKQLPVPVELGREFQFHSIFVCPVSKEQSTEENPPMLMLCG 373
            P               ++ ++L +P+   +  Q HS  VC +SKE    ENPP ++  G
Sbjct: 329 TPYGLEEGCTKEDPLSQENFRKLALPLPFSK--QHHSKLVCYISKELMDTENPPQVLPNG 388

The following BLAST results are available for this feature:

BLAST of Carg18503 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963019.1	3.6e-221	100.00	protein RMD5 homolog [Cucurbita moschata] >XP_022963020.1 protein RMD5 homolog [...	[more]
XP_023003688.1	5.2e-220	99.48	protein RMD5 homolog [Cucurbita maxima] >XP_023003689.1 protein RMD5 homolog [Cu...	[more]
KAG6594927.1	6.3e-218	100.00	Protein RMD5-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022132999.1	2.1e-213	95.62	protein RMD5 homolog A-like [Momordica charantia] >XP_022133000.1 protein RMD5 h...	[more]
XP_008440495.1	1.0e-212	95.62	PREDICTED: protein RMD5 homolog A [Cucumis melo] >XP_008440496.1 PREDICTED: prot...	[more]

BLAST of Carg18503 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T075	8.2e-128	59.18	Protein RMD5 homolog OS=Arabidopsis thaliana OX=3702 GN=RMD5 PE=1 SV=1	[more]
O59668	5.6e-52	33.06	LisH domain-containing protein C29A3.03c OS=Schizosaccharomyces pombe (strain 97...	[more]
Q640V2	9.6e-52	33.82	E3 ubiquitin-protein ligase RMND5A OS=Xenopus tropicalis OX=8364 GN=rmnd5a PE=2 ...	[more]
Q6GLP4	1.3e-51	32.28	E3 ubiquitin-protein ligase RMND5A OS=Xenopus laevis OX=8355 GN=rmnd5a PE=1 SV=1	[more]
Q9H871	2.8e-51	33.62	E3 ubiquitin-protein transferase RMND5A OS=Homo sapiens OX=9606 GN=RMND5A PE=1 S...	[more]

BLAST of Carg18503 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HGI0	1.7e-221	100.00	protein RMD5 homolog OS=Cucurbita moschata OX=3662 GN=LOC111463351 PE=4 SV=1	[more]
A0A6J1KU15	2.5e-220	99.48	protein RMD5 homolog OS=Cucurbita maxima OX=3661 GN=LOC111497206 PE=4 SV=1	[more]
A0A6J1BU35	1.0e-213	95.62	protein RMD5 homolog A-like OS=Momordica charantia OX=3673 GN=LOC111005703 PE=4 ...	[more]
A0A1S3B0U3	5.0e-213	95.62	protein RMD5 homolog A OS=Cucumis melo OX=3656 GN=LOC103484906 PE=4 SV=1	[more]
A0A5D3CLJ0	5.0e-213	95.62	Protein RMD5-like protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of Carg18503 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37880.1	5.8e-129	59.18	LisH/CRA/RING-U-box domains-containing protein	[more]
AT2G22690.1	1.4e-122	56.92	zinc ion binding	[more]
AT2G22690.2	1.4e-122	56.92	zinc ion binding	[more]
AT5G09630.1	2.2e-99	47.80	LisH/CRA/RING-U-box domains-containing protein	[more]
AT3G55070.1	9.0e-21	22.77	LisH/CRA/RING-U-box domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006595	CTLH, C-terminal LisH motif	SMART	SM00668	ctlh	coord: 150..207 e-value: 7.0E-7 score: 38.9
IPR006595	CTLH, C-terminal LisH motif	PROSITE	PS50897	CTLH	coord: 150..207 score: 10.688223
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 331..374 e-value: 8.0E-4 score: 28.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 331..374 score: 8.683004
IPR006594	LIS1 homology motif	SMART	SM00667	Lish	coord: 110..142 e-value: 0.0025 score: 27.1
IPR006594	LIS1 homology motif	PROSITE	PS50896	LISH	coord: 110..142 score: 9.32115
IPR013144	CRA domain	SMART	SM00757	toby_final6	coord: 203..299 e-value: 2.5E-17 score: 73.6
IPR024964	CTLH/CRA C-terminal to LisH motif domain	PFAM	PF10607	CLTH	coord: 151..291 e-value: 2.9E-30 score: 105.2
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 331..372 e-value: 2.0E-9 score: 37.3
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 322..387 e-value: 8.0E-9 score: 36.6
None	No IPR available	PANTHER	PTHR12170:SF11	PROTEIN RMD5 HOMOLOG	coord: 1..388
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 325..383
IPR045098	Fyv10 family	PANTHER	PTHR12170	MACROPHAGE ERYTHROBLAST ATTACHER-RELATED	coord: 1..388
IPR044063	Gid-type RING finger domain	PROSITE	PS51867	ZF_RING_GID	coord: 331..374 score: 13.15673
IPR037683	Rmd5, degenerated RING (dRING) finger	CDD	cd16652	dRing_Rmd5p_like	coord: 329..375 e-value: 1.08309E-28 score: 104.258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18503-RA	Carg18503-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0034657	GID complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity