Carg18497 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18497
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor bHLH93
Location	Carg_Chr07: 2631738 .. 2632997 (+)
RNA-Seq Expression	Carg18497
Synteny	Carg18497

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTCACTCAATGTGGTTTCTTAGAGGAGTTATTAGCTTCAACGCCTTGGACCTCCTCCTCCTCCTCCTCCTCCTATTCAAATGGGTTCAATGATTTCTTCCCAAATGGCTGCAATTTCAGTTCTTTTGATGAAATTCCCCAAATGGGTACCTCTATTTCACCCCATTTTCCCGGTTTTCAAACGCCTACTGACTTTTCTTTCGCCGACCAACACCTCTACGGCAGTTTTCTTGAAGGGTTTGCATTGCCGGAGGTGGATTCTTCATCGTACACTAAGAACAACGAAACCCCACCATTTGTTTCGGTAGAGGAGATTAGTAATAAGAACAGTGGTTTCCCTCCGACGGCGATGGAGGAGGAAGAATTTGGTTTTATGGAGTGTGAAGCGGCACCAAATGTTTGCAAACAGGAAATGGAGGTAATGGGTGGGCGTGAAAGTAATGATTCTAAAATGGGTGTGGCAGAATTGGGGAAAAGAAGAAGCAACAAGGCTAAGAAGCTTGATGGACAGCCTTCGAAGAATTTAATGGCGGAAAGAAGAAGAAGGAGACGGTTGAATGATCGGCTTTCAATGCTTAGAGCAATAGTTCCTAAAATAAGCAAGGTCAAAATGAATCCATACCTTTTTCTTTTTCTGTTCTTCGTGTCTTCATAGAAATTTCCATGATTTTTTCTGTACTTTTGCATGTAAACCAGATGGATAGAACGTCTATTCTTGGAGACACGATCGATTACGTGAAAGAGCTGCTTGAAAGAATCAATAACTTGAAAGAAGAAGATTCAAATCATGCAAGTCTAAATGGGATCTCCAAGGAAAGGAAGTCCAATGAAGTTCTGGTGAGAAATTCGTGTGTGTCACTGTTTAGTTTCAGTCCGCCATTGTTGAGTTAATGATAGCAGTTTTGTTGTCGCACAGTTCGACGTTGAAAGGAAGGAGATGGAGACTCGGATCGGCATTTGCTGTACGACGAGGCCAGGATTATTGCTATCCACCGTCAACACATTAGAGGCATTGGGCCTAGAGATTCAGCAGTGTGTTATTAGCTGCTTCAATGATTTCTCAATGCAAGCTTCTTGTTCAGAGGTTTTGTTTCTTTCAATATCTTTCAATATCTGGCCGTCTCTTTTTCTGAATGAAACAATGTTGGTTCTTTTTCTGTGTCAGCAGGGAAGTTCTCAGAAAGTAGTGCCAAGTTCTGATGATATAAAGGAGGCATTGTTCAGAAATGCAGGCTATGGAGGGAAGTGCTTGTAG

mRNA sequence

ATGGAGCTCACTCAATGTGGTTTCTTAGAGGAGTTATTAGCTTCAACGCCTTGGACCTCCTCCTCCTCCTCCTCCTCCTATTCAAATGGGTTCAATGATTTCTTCCCAAATGGCTGCAATTTCAGTTCTTTTGATGAAATTCCCCAAATGGGTACCTCTATTTCACCCCATTTTCCCGGTTTTCAAACGCCTACTGACTTTTCTTTCGCCGACCAACACCTCTACGGCAGTTTTCTTGAAGGGTTTGCATTGCCGGAGGTGGATTCTTCATCGTACACTAAGAACAACGAAACCCCACCATTTGTTTCGGTAGAGGAGATTAGTAATAAGAACAGTGGTTTCCCTCCGACGGCGATGGAGGAGGAAGAATTTGGTTTTATGGAGTGTGAAGCGGCACCAAATGTTTGCAAACAGGAAATGGAGGTAATGGGTGGGCGTGAAAGTAATGATTCTAAAATGGGTGTGGCAGAATTGGGGAAAAGAAGAAGCAACAAGGCTAAGAAGCTTGATGGACAGCCTTCGAAGAATTTAATGGCGGAAAGAAGAAGAAGGAGACGGTTGAATGATCGGCTTTCAATGCTTAGAGCAATAGTTCCTAAAATAAGCAAGATGGATAGAACGTCTATTCTTGGAGACACGATCGATTACGTGAAAGAGCTGCTTGAAAGAATCAATAACTTGAAAGAAGAAGATTCAAATCATGCAAGTCTAAATGGGATCTCCAAGGAAAGGAAGTCCAATGAAGTTCTGTTCGACGTTGAAAGGAAGGAGATGGAGACTCGGATCGGCATTTGCTGTACGACGAGGCCAGGATTATTGCTATCCACCGTCAACACATTAGAGGCATTGGGCCTAGAGATTCAGCAGTGTGTTATTAGCTGCTTCAATGATTTCTCAATGCAAGCTTCTTGTTCAGAGGGAAGTTCTCAGAAAGTAGTGCCAAGTTCTGATGATATAAAGGAGGCATTGTTCAGAAATGCAGGCTATGGAGGGAAGTGCTTGTAG

Coding sequence (CDS)

ATGGAGCTCACTCAATGTGGTTTCTTAGAGGAGTTATTAGCTTCAACGCCTTGGACCTCCTCCTCCTCCTCCTCCTCCTATTCAAATGGGTTCAATGATTTCTTCCCAAATGGCTGCAATTTCAGTTCTTTTGATGAAATTCCCCAAATGGGTACCTCTATTTCACCCCATTTTCCCGGTTTTCAAACGCCTACTGACTTTTCTTTCGCCGACCAACACCTCTACGGCAGTTTTCTTGAAGGGTTTGCATTGCCGGAGGTGGATTCTTCATCGTACACTAAGAACAACGAAACCCCACCATTTGTTTCGGTAGAGGAGATTAGTAATAAGAACAGTGGTTTCCCTCCGACGGCGATGGAGGAGGAAGAATTTGGTTTTATGGAGTGTGAAGCGGCACCAAATGTTTGCAAACAGGAAATGGAGGTAATGGGTGGGCGTGAAAGTAATGATTCTAAAATGGGTGTGGCAGAATTGGGGAAAAGAAGAAGCAACAAGGCTAAGAAGCTTGATGGACAGCCTTCGAAGAATTTAATGGCGGAAAGAAGAAGAAGGAGACGGTTGAATGATCGGCTTTCAATGCTTAGAGCAATAGTTCCTAAAATAAGCAAGATGGATAGAACGTCTATTCTTGGAGACACGATCGATTACGTGAAAGAGCTGCTTGAAAGAATCAATAACTTGAAAGAAGAAGATTCAAATCATGCAAGTCTAAATGGGATCTCCAAGGAAAGGAAGTCCAATGAAGTTCTGTTCGACGTTGAAAGGAAGGAGATGGAGACTCGGATCGGCATTTGCTGTACGACGAGGCCAGGATTATTGCTATCCACCGTCAACACATTAGAGGCATTGGGCCTAGAGATTCAGCAGTGTGTTATTAGCTGCTTCAATGATTTCTCAATGCAAGCTTCTTGTTCAGAGGGAAGTTCTCAGAAAGTAGTGCCAAGTTCTGATGATATAAAGGAGGCATTGTTCAGAAATGCAGGCTATGGAGGGAAGTGCTTGTAG

Protein sequence

MELTQCGFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPGFQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAMEEEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAERRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSNHASLNGISKERKSNEVLFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEGSSQKVVPSSDDIKEALFRNAGYGGKCL

Homology

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BLAST of Carg18497 vs. NCBI nr
Match: KAG7026884.1 (Transcription factor bHLH93, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 655.6 bits (1690), Expect = 2.3e-184
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0


Query: 1   MELTQCGFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG 60
           MELTQCGFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG
Sbjct: 1   MELTQCGFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG 60

Query: 61  FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAME 120
           FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAME
Sbjct: 61  FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAME 120

Query: 121 EEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAE 180
           EEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAE
Sbjct: 121 EEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAE 180

Query: 181 RRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSNHASLNGI 240
           RRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSNHASLNGI
Sbjct: 181 RRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSNHASLNGI 240

Query: 241 SKERKSNEVLFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSM 300
           SKERKSNEVLFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSM
Sbjct: 241 SKERKSNEVLFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSM 300

Query: 301 QASCSEGSSQKVVPSSDDIKEALFRNAGYGGKCL 335
           QASCSEGSSQKVVPSSDDIKEALFRNAGYGGKCL
Sbjct: 301 QASCSEGSSQKVVPSSDDIKEALFRNAGYGGKCL 334

[Close]

BLAST of Carg18497 vs. NCBI nr
Match: KAG6594921.1 (Transcription factor basic helix-loop-helix 93, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 646.4 bits (1666), Expect = 1.4e-181
Identity = 331/334 (99.10%), Postives = 331/334 (99.10%), Query Frame = 0


Query: 1   MELTQCGFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG 60
           MELTQ GFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG
Sbjct: 1   MELTQYGFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG 60

Query: 61  FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAME 120
           FQTPTDFSFADQH YGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAME
Sbjct: 61  FQTPTDFSFADQHPYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAME 120

Query: 121 EEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAE 180
           EEEFGFMECEAAPNVCKQEMEVMGGRESNDSK GVAELGKRRSNKAKKLDGQPSKNLMAE
Sbjct: 121 EEEFGFMECEAAPNVCKQEMEVMGGRESNDSKRGVAELGKRRSNKAKKLDGQPSKNLMAE 180

Query: 181 RRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSNHASLNGI 240
           RRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSNHASLNGI
Sbjct: 181 RRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSNHASLNGI 240

Query: 241 SKERKSNEVLFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSM 300
           SKERKSNEVLFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSM
Sbjct: 241 SKERKSNEVLFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSM 300

Query: 301 QASCSEGSSQKVVPSSDDIKEALFRNAGYGGKCL 335
           QASCSEGSSQKVVPSSDDIKEALFRNAGYGGKCL
Sbjct: 301 QASCSEGSSQKVVPSSDDIKEALFRNAGYGGKCL 334

[Close]

BLAST of Carg18497 vs. NCBI nr
Match: XP_022963425.1 (transcription factor bHLH93 [Cucurbita moschata])

HSP 1 Score: 645.2 bits (1663), Expect = 3.1e-181
Identity = 330/334 (98.80%), Postives = 330/334 (98.80%), Query Frame = 0


Query: 1   MELTQCGFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG 60
           MELTQ GFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG
Sbjct: 30  MELTQYGFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG 89

Query: 61  FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAME 120
           FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAME
Sbjct: 90  FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAME 149

Query: 121 EEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAE 180
           EEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAE
Sbjct: 150 EEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAE 209

Query: 181 RRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSNHASLNGI 240
           RRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERI NLKEEDSNHASLNGI
Sbjct: 210 RRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERIKNLKEEDSNHASLNGI 269

Query: 241 SKERKSNEVLFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSM 300
           SKERKSNEVLFDVERKE ETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSM
Sbjct: 270 SKERKSNEVLFDVERKERETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSM 329

Query: 301 QASCSEGSSQKVVPSSDDIKEALFRNAGYGGKCL 335
           QASCSEGSSQK VPSSDDIKEALFRNAGYGGKCL
Sbjct: 330 QASCSEGSSQKAVPSSDDIKEALFRNAGYGGKCL 363

[Close]

BLAST of Carg18497 vs. NCBI nr
Match: XP_023003752.1 (transcription factor bHLH93 [Cucurbita maxima])

HSP 1 Score: 636.7 bits (1641), Expect = 1.1e-178
Identity = 327/336 (97.32%), Postives = 330/336 (98.21%), Query Frame = 0


Query: 1   MELTQCGFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG 60
           MELTQ GFLEELLASTPWTSSSSSS+YSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG
Sbjct: 30  MELTQYGFLEELLASTPWTSSSSSSTYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG 89

Query: 61  FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAM- 120
           FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAM 
Sbjct: 90  FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAME 149

Query: 121 -EEEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLM 180
            EEEE GFMECEAAPNVCKQEMEVMGGRE+NDSKMGVAELGKRRSNKAKKLDGQPSKNLM
Sbjct: 150 EEEEELGFMECEAAPNVCKQEMEVMGGRETNDSKMGVAELGKRRSNKAKKLDGQPSKNLM 209

Query: 181 AERRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSNHASLN 240
           AERRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSNHASLN
Sbjct: 210 AERRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSNHASLN 269

Query: 241 GISKERKSNEVLFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDF 300
           GISKERKSN+VLFDVERKE ETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDF
Sbjct: 270 GISKERKSNQVLFDVERKERETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDF 329

Query: 301 SMQASCSEGSSQKVVPSSDDIKEALFRNAGYGGKCL 335
           SMQASCSEGSSQK VPSSDDIKEALFRNAGYGGKCL
Sbjct: 330 SMQASCSEGSSQKAVPSSDDIKEALFRNAGYGGKCL 365

[Close]

BLAST of Carg18497 vs. NCBI nr
Match: XP_023517244.1 (transcription factor bHLH93 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 630.6 bits (1625), Expect = 7.9e-177
Identity = 325/336 (96.73%), Postives = 329/336 (97.92%), Query Frame = 0


Query: 1   MELTQCGFLEELLASTPWT--SSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHF 60
           MELTQ GFLEELLASTPWT  SSSSSSSYSNGFNDFFPNG NFSSF+EIPQMGTSISPHF
Sbjct: 18  MELTQYGFLEELLASTPWTSSSSSSSSSYSNGFNDFFPNGSNFSSFEEIPQMGTSISPHF 77

Query: 61  PGFQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTA 120
           PGFQTPTDFSFADQHLYGSFLEGFALPEVDS SYTKNNETPPFVS+EEIS+KNSGFPPTA
Sbjct: 78  PGFQTPTDFSFADQHLYGSFLEGFALPEVDSLSYTKNNETPPFVSLEEISDKNSGFPPTA 137

Query: 121 MEEEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLM 180
           MEEEEFGFMECEAAPNVCKQEMEVMGGRE+NDSKMGVAELGKRRSNKAKKLDGQPSKNLM
Sbjct: 138 MEEEEFGFMECEAAPNVCKQEMEVMGGRETNDSKMGVAELGKRRSNKAKKLDGQPSKNLM 197

Query: 181 AERRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSNHASLN 240
           AERRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDS HASLN
Sbjct: 198 AERRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSKHASLN 257

Query: 241 GISKERKSNEVLFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDF 300
           GISKERKSNEVLFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDF
Sbjct: 258 GISKERKSNEVLFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDF 317

Query: 301 SMQASCSEGSSQKVVPSSDDIKEALFRNAGYGGKCL 335
           SMQASCSEGSSQK VPSSDDIKEALFRNAGYGGKCL
Sbjct: 318 SMQASCSEGSSQKAVPSSDDIKEALFRNAGYGGKCL 353

[Close]

BLAST of Carg18497 vs. ExPASy Swiss-Prot
Match: Q9LSL1 (Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.6e-61
Identity = 164/378 (43.39%), Postives = 219/378 (57.94%), Query Frame = 0


Query: 1   MEL-TQCGFLEELLASTPWTSSS---SSSSYSNGF----NDFFPNGCNF----------- 60
           MEL TQ    EELL  T   ++    ++ S++ GF    + FFPNG N            
Sbjct: 1   MELSTQMNVFEELLVPTKQETTDNNINNLSFNGGFDHHHHQFFPNGYNIDYLCFNNEEED 60

Query: 61  -------SSFDEIPQMGTSISPHFPGFQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTK 120
                  SSF ++      +  H P    P                    P + SS+   
Sbjct: 61  ENTLLYPSSFMDLISQPPPLLLHQPPPLQPLS------------------PPLSSSATAG 120

Query: 121 NNETPPFV-SVEEISNKNSGFPPTAM---EEEEFGFMECEAAPNVCKQEMEVMGGRESND 180
                PF+ +++EI + +S  PP  +   +EE F         N       +M   +S  
Sbjct: 121 ATFDYPFLEALQEIIDSSSSSPPLILQNGQEENFN--------NPMSYPSPLMESDQSKS 180

Query: 181 SKMGVAELGKRRSNKAKKLDGQPSKNLMAERRRRRRLNDRLSMLRAIVPKISKMDRTSIL 240
             +G    G+    K+KKL+GQPSKNLMAERRRR+RLNDRLSMLR+IVPKISKMDRTSIL
Sbjct: 181 FSVGYCG-GETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSIL 240

Query: 241 GDTIDYVKELLERINNLKEED--------SNHASLNGISKERKSNEVL------FDVERK 300
           GD IDY+KELL++IN L++E+        S+H+ L G  K+  +NE L      F+++R+
Sbjct: 241 GDAIDYMKELLDKINKLQDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRR 300

Query: 301 EMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEGSSQKVVPSS 335
           + +TR+ ICC+ +PGLLLSTVNTLE LGLEI+QCVISCF+DFS+QASCSEG+ Q+   +S
Sbjct: 301 DEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQASCSEGAEQRDFITS 351

[Close]

BLAST of Carg18497 vs. ExPASy Swiss-Prot
Match: Q9LXA9 (Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 9.4e-56
Identity = 114/193 (59.07%), Postives = 152/193 (78.76%), Query Frame = 0


Query: 147 ESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAERRRRRRLNDRLSMLRAIVPKISKMDR 206
           E + S + + E  K+RSN  KKL+GQPSKNLMAERRRR+RLNDRLS+LR+IVPKI+KMDR
Sbjct: 125 EESKSFISIGETNKKRSN--KKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDR 184

Query: 207 TSILGDTIDYVKELLERINNLKEED-----SNHASLNGISKERKSNEVLFDVERKEMETR 266
           TSILGD IDY+KELL++IN L+E++     ++H S    ++    N + F+V+++E+ T 
Sbjct: 185 TSILGDAIDYMKELLDKINKLQEDEQELGSNSHLSTLITNESMVRNSLKFEVDQREVNTH 244

Query: 267 IGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEGSSQKVVPSSDDIKE 326
           I ICC T+PGL++STV+TLE LGLEI+QCVISCF+DFS+QASC E   Q+ + +S+  K+
Sbjct: 245 IDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVTSEATKQ 304

Query: 327 ALFRNAGYGGKCL 335
           AL RNAGYGG+CL
Sbjct: 305 ALIRNAGYGGRCL 315

[Close]

BLAST of Carg18497 vs. ExPASy Swiss-Prot
Match: Q10S44 (Transcription factor BHLH3 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH3 PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.7e-50
Identity = 119/204 (58.33%), Postives = 142/204 (69.61%), Query Frame = 0


Query: 144 GGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAERRRRRRLNDRLSMLRAIVPKISK 203
           G  ES++   G+  +G    +   KL G PSKNLMAERRRR+RLNDRLSMLR+IVPKISK
Sbjct: 152 GAGESSEMMAGIRGVG-GGVHPRSKLHGTPSKNLMAERRRRKRLNDRLSMLRSIVPKISK 211

Query: 204 MDRTSILGDTIDYVKELLERINNLKEE---DSNHASLNGISKERKS---NEVL------F 263
           MDRTSILGDTIDYVKEL ERI  L+EE         L    K+  S   NE+L      F
Sbjct: 212 MDRTSILGDTIDYVKELTERIKTLEEEIGVTPEELDLLNTMKDSSSGNNNEMLVRNSTKF 271

Query: 264 DVE-RKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEGSSQ 323
           DVE R    TRI ICC   PG+LLSTV+ LE LGLEI+QCV+SCF+DF MQASC +   +
Sbjct: 272 DVENRGSGNTRIEICCPANPGVLLSTVSALEVLGLEIEQCVVSCFSDFGMQASCLQEDGK 331

Query: 324 KVVPSSDDIKEALFRNAGYGGKCL 335
           + V S+D+IK+ LFR+AGYGG+CL
Sbjct: 332 RQVVSTDEIKQTLFRSAGYGGRCL 354

[Close]

BLAST of Carg18497 vs. ExPASy Swiss-Prot
Match: Q336V8 (Basic helix-loop-helix protein 004 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH004 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-41
Identity = 100/188 (53.19%), Postives = 129/188 (68.62%), Query Frame = 0


Query: 171 GQPSKNLMAERRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEE 230
           G PSKNLMAERRRR+RLNDRLSMLR++VP+ISKMDRTSILGDTI YVKEL++RI NL+ E
Sbjct: 192 GAPSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVE 251

Query: 231 ----DSNHASLNGISKERKS------------------NEVLFDVERKEM-ETRIGICCT 290
               DS+ +S   +S  + +                  N   F+VER+E   TRI + C 
Sbjct: 252 AATGDSSSSSTENLSMLKLNTLKPPPSSSSGEETPLIRNSTRFEVERRENGSTRIEMACA 311

Query: 291 TRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASC-SEGSSQKVVPSSDDIKEALFRN 335
             P LL ST+  LEALG+EI+QCVISCF+DF+MQASC  +   +++   +++IK+ LFR+
Sbjct: 312 AIPELLPSTLAALEALGVEIEQCVISCFDDFAMQASCLQDDKKREMTRDTEEIKQTLFRS 371

[Close]

BLAST of Carg18497 vs. ExPASy Swiss-Prot
Match: Q9LSE2 (Transcription factor ICE1 OS=Arabidopsis thaliana OX=3702 GN=SCRM PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.2e-30
Identity = 96/218 (44.04%), Postives = 122/218 (55.96%), Query Frame = 0


Query: 147 ESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAERRRRRRLNDRLSMLRAIVPKISKMDR 206
           E N+S      +      K KK  G P+KNLMAERRRR++LNDRL MLR++VPKISKMDR
Sbjct: 280 EINESGKAAESVQIGGGGKGKK-KGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDR 339

Query: 207 TSILGDTIDYVKELLERINNLKEE-------------DSNH------ASLNGISKER--- 266
            SILGD IDY+KELL+RIN+L  E              S H       +L+   KE    
Sbjct: 340 ASILGDAIDYLKELLQRINDLHNELESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCP 399

Query: 267 ------KSNEVLFDVERKE-METRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFND 326
                 K  +   +V  +E     I + C  RPGLLL+T+  L+ LGL++QQ VISCFN 
Sbjct: 400 SSLPSPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG 459

Query: 327 FSMQA----SCSEGSSQKVVPSSDDIKEALFRNAGYGG 332
           F++       C EG  Q+++P  D IK  LF  AGY G
Sbjct: 460 FALDVFRAEQCQEG--QEILP--DQIKAVLFDTAGYAG 492

[Close]

BLAST of Carg18497 vs. ExPASy TrEMBL
Match: A0A6J1HHY7 (transcription factor bHLH93 OS=Cucurbita moschata OX=3662 GN=LOC111463635 PE=4 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 1.5e-181
Identity = 330/334 (98.80%), Postives = 330/334 (98.80%), Query Frame = 0


Query: 1   MELTQCGFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG 60
           MELTQ GFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG
Sbjct: 30  MELTQYGFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG 89

Query: 61  FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAME 120
           FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAME
Sbjct: 90  FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAME 149

Query: 121 EEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAE 180
           EEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAE
Sbjct: 150 EEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAE 209

Query: 181 RRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSNHASLNGI 240
           RRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERI NLKEEDSNHASLNGI
Sbjct: 210 RRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERIKNLKEEDSNHASLNGI 269

Query: 241 SKERKSNEVLFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSM 300
           SKERKSNEVLFDVERKE ETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSM
Sbjct: 270 SKERKSNEVLFDVERKERETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSM 329

Query: 301 QASCSEGSSQKVVPSSDDIKEALFRNAGYGGKCL 335
           QASCSEGSSQK VPSSDDIKEALFRNAGYGGKCL
Sbjct: 330 QASCSEGSSQKAVPSSDDIKEALFRNAGYGGKCL 363

[Close]

BLAST of Carg18497 vs. ExPASy TrEMBL
Match: A0A6J1KNH7 (transcription factor bHLH93 OS=Cucurbita maxima OX=3661 GN=LOC111497242 PE=4 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 5.3e-179
Identity = 327/336 (97.32%), Postives = 330/336 (98.21%), Query Frame = 0


Query: 1   MELTQCGFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG 60
           MELTQ GFLEELLASTPWTSSSSSS+YSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG
Sbjct: 30  MELTQYGFLEELLASTPWTSSSSSSTYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG 89

Query: 61  FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAM- 120
           FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAM 
Sbjct: 90  FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAME 149

Query: 121 -EEEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLM 180
            EEEE GFMECEAAPNVCKQEMEVMGGRE+NDSKMGVAELGKRRSNKAKKLDGQPSKNLM
Sbjct: 150 EEEEELGFMECEAAPNVCKQEMEVMGGRETNDSKMGVAELGKRRSNKAKKLDGQPSKNLM 209

Query: 181 AERRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSNHASLN 240
           AERRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSNHASLN
Sbjct: 210 AERRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDSNHASLN 269

Query: 241 GISKERKSNEVLFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDF 300
           GISKERKSN+VLFDVERKE ETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDF
Sbjct: 270 GISKERKSNQVLFDVERKERETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDF 329

Query: 301 SMQASCSEGSSQKVVPSSDDIKEALFRNAGYGGKCL 335
           SMQASCSEGSSQK VPSSDDIKEALFRNAGYGGKCL
Sbjct: 330 SMQASCSEGSSQKAVPSSDDIKEALFRNAGYGGKCL 365

[Close]

BLAST of Carg18497 vs. ExPASy TrEMBL
Match: A0A6J1GDE8 (transcription factor bHLH93-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452970 PE=4 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 2.3e-145
Identity = 277/345 (80.29%), Postives = 294/345 (85.22%), Query Frame = 0


Query: 1   MELTQCGFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG 60
           MEL+Q GFLEELLASTPW     SSSYSNGFNDFF N  NF  FDE PQMGTSISPHFP 
Sbjct: 1   MELSQHGFLEELLASTPW-----SSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPA 60

Query: 61  FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAME 120
            QT TDFSFADQHLY +F+EGFA+PE+DSSSYT+NNETPPFVS EE+SNKNSGFPP  ME
Sbjct: 61  LQTATDFSFADQHLYTNFIEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPVGME 120

Query: 121 EEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAE 180
           EEE GFME EAAP+VCK EME MGGRE+NDSKMGVAE  KR SNKAKK++GQPSKNLMAE
Sbjct: 121 EEELGFMEAEAAPSVCKVEMEQMGGRETNDSKMGVAESRKRTSNKAKKIEGQPSKNLMAE 180

Query: 181 RRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEE-----DSNHA 240
           RRRR+RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEE     DSNH 
Sbjct: 181 RRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHV 240

Query: 241 SLNGISKERKSNEV------LFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQ 300
             N ISKE K NEV       FD+E++E +TRI ICC TRPGLLLSTVNTLEALGLEIQQ
Sbjct: 241 GFNAISKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQ 300

Query: 301 CVISCFNDFSMQASCSEGSSQKVVPSSDDIKEALFRNAGYGGKCL 335
           CVISCFNDFSMQA CSEGS +K V SSDDIKEALFRNAGYGGKCL
Sbjct: 301 CVISCFNDFSMQACCSEGSGEKAVASSDDIKEALFRNAGYGGKCL 340

[Close]

BLAST of Carg18497 vs. ExPASy TrEMBL
Match: A0A6J1GCM1 (transcription factor bHLH93-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452970 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 5.6e-144
Identity = 277/346 (80.06%), Postives = 294/346 (84.97%), Query Frame = 0


Query: 1   MELTQCGFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG 60
           MEL+Q GFLEELLASTPW     SSSYSNGFNDFF N  NF  FDE PQMGTSISPHFP 
Sbjct: 1   MELSQHGFLEELLASTPW-----SSSYSNGFNDFFQNTWNFGCFDENPQMGTSISPHFPA 60

Query: 61  FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAME 120
            QT TDFSFADQHLY +F+EGFA+PE+DSSSYT+NNETPPFVS EE+SNKNSGFPP  ME
Sbjct: 61  LQTATDFSFADQHLYTNFIEGFAMPELDSSSYTRNNETPPFVSQEEMSNKNSGFPPVGME 120

Query: 121 EEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAE 180
           EEE GFME EAAP+VCK EME MGGRE+NDSKMGVAE  KR SNKAKK++GQPSKNLMAE
Sbjct: 121 EEELGFMEAEAAPSVCKVEMEQMGGRETNDSKMGVAESRKRTSNKAKKIEGQPSKNLMAE 180

Query: 181 RRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEE-----DSNHA 240
           RRRR+RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEE     DSNH 
Sbjct: 181 RRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNHV 240

Query: 241 SLNGISKERKSNEV------LFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQ 300
             N ISKE K NEV       FD+E++E +TRI ICC TRPGLLLSTVNTLEALGLEIQQ
Sbjct: 241 GFNAISKEGKPNEVQVRNSPKFDIEKRESKTRIDICCATRPGLLLSTVNTLEALGLEIQQ 300

Query: 301 CVISCFNDFSMQASCSE-GSSQKVVPSSDDIKEALFRNAGYGGKCL 335
           CVISCFNDFSMQA CSE GS +K V SSDDIKEALFRNAGYGGKCL
Sbjct: 301 CVISCFNDFSMQACCSEQGSGEKAVASSDDIKEALFRNAGYGGKCL 341

[Close]

BLAST of Carg18497 vs. ExPASy TrEMBL
Match: A0A6J1IPK2 (transcription factor bHLH93-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478784 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 1.2e-143
Identity = 276/345 (80.00%), Postives = 293/345 (84.93%), Query Frame = 0


Query: 1   MELTQCGFLEELLASTPWTSSSSSSSYSNGFNDFFPNGCNFSSFDEIPQMGTSISPHFPG 60
           MEL+Q GFLEELLASTPW     SSSYSNGFNDFF N  NFS FDE PQMGTSIS HFP 
Sbjct: 1   MELSQHGFLEELLASTPW-----SSSYSNGFNDFFQNTWNFSCFDENPQMGTSISSHFPA 60

Query: 61  FQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTKNNETPPFVSVEEISNKNSGFPPTAME 120
            QT TDFSFADQHLY +FLEG A+PE+DSSSYTKNNETPPFVS EE+SN+NSGFPP  ME
Sbjct: 61  LQTATDFSFADQHLYANFLEGLAMPELDSSSYTKNNETPPFVSQEEMSNRNSGFPPVGME 120

Query: 121 EEEFGFMECEAAPNVCKQEMEVMGGRESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAE 180
           EEE GFME EAAP+VCK EME MGGRE+NDSKMGVAE  KR SNKAKK++GQPSKNLMAE
Sbjct: 121 EEELGFMEAEAAPSVCKVEMEQMGGRETNDSKMGVAESRKRTSNKAKKIEGQPSKNLMAE 180

Query: 181 RRRRRRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEE-----DSNHA 240
           RRRR+RLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEE     DSN  
Sbjct: 181 RRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEDEFGLDSNQV 240

Query: 241 SLNGISKERKSNEV------LFDVERKEMETRIGICCTTRPGLLLSTVNTLEALGLEIQQ 300
             NGISKE K NEV       F +E++E +TRI ICC+TRPGLLLSTVNTLEALGLEIQQ
Sbjct: 241 GFNGISKEGKPNEVQVRNSPKFAIEKRESKTRIDICCSTRPGLLLSTVNTLEALGLEIQQ 300

Query: 301 CVISCFNDFSMQASCSEGSSQKVVPSSDDIKEALFRNAGYGGKCL 335
           CVISCFNDFSMQA CSEGS +K V SSDDIKEALFRNAGYGGKCL
Sbjct: 301 CVISCFNDFSMQACCSEGSGEKAVASSDDIKEALFRNAGYGGKCL 340

[Close]

BLAST of Carg18497 vs. TAIR 10
Match: AT5G65640.1 (beta HLH protein 93 )

HSP 1 Score: 237.3 bits (604), Expect = 1.8e-62
Identity = 164/378 (43.39%), Postives = 219/378 (57.94%), Query Frame = 0


Query: 1   MEL-TQCGFLEELLASTPWTSSS---SSSSYSNGF----NDFFPNGCNF----------- 60
           MEL TQ    EELL  T   ++    ++ S++ GF    + FFPNG N            
Sbjct: 1   MELSTQMNVFEELLVPTKQETTDNNINNLSFNGGFDHHHHQFFPNGYNIDYLCFNNEEED 60

Query: 61  -------SSFDEIPQMGTSISPHFPGFQTPTDFSFADQHLYGSFLEGFALPEVDSSSYTK 120
                  SSF ++      +  H P    P                    P + SS+   
Sbjct: 61  ENTLLYPSSFMDLISQPPPLLLHQPPPLQPLS------------------PPLSSSATAG 120

Query: 121 NNETPPFV-SVEEISNKNSGFPPTAM---EEEEFGFMECEAAPNVCKQEMEVMGGRESND 180
                PF+ +++EI + +S  PP  +   +EE F         N       +M   +S  
Sbjct: 121 ATFDYPFLEALQEIIDSSSSSPPLILQNGQEENFN--------NPMSYPSPLMESDQSKS 180

Query: 181 SKMGVAELGKRRSNKAKKLDGQPSKNLMAERRRRRRLNDRLSMLRAIVPKISKMDRTSIL 240
             +G    G+    K+KKL+GQPSKNLMAERRRR+RLNDRLSMLR+IVPKISKMDRTSIL
Sbjct: 181 FSVGYCG-GETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSIL 240

Query: 241 GDTIDYVKELLERINNLKEED--------SNHASLNGISKERKSNEVL------FDVERK 300
           GD IDY+KELL++IN L++E+        S+H+ L G  K+  +NE L      F+++R+
Sbjct: 241 GDAIDYMKELLDKINKLQDEEQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRR 300

Query: 301 EMETRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEGSSQKVVPSS 335
           + +TR+ ICC+ +PGLLLSTVNTLE LGLEI+QCVISCF+DFS+QASCSEG+ Q+   +S
Sbjct: 301 DEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQASCSEGAEQRDFITS 351

[Close]

BLAST of Carg18497 vs. TAIR 10
Match: AT5G10570.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 218.8 bits (556), Expect = 6.7e-57
Identity = 114/193 (59.07%), Postives = 152/193 (78.76%), Query Frame = 0


Query: 147 ESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAERRRRRRLNDRLSMLRAIVPKISKMDR 206
           E + S + + E  K+RSN  KKL+GQPSKNLMAERRRR+RLNDRLS+LR+IVPKI+KMDR
Sbjct: 125 EESKSFISIGETNKKRSN--KKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDR 184

Query: 207 TSILGDTIDYVKELLERINNLKEED-----SNHASLNGISKERKSNEVLFDVERKEMETR 266
           TSILGD IDY+KELL++IN L+E++     ++H S    ++    N + F+V+++E+ T 
Sbjct: 185 TSILGDAIDYMKELLDKINKLQEDEQELGSNSHLSTLITNESMVRNSLKFEVDQREVNTH 244

Query: 267 IGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEGSSQKVVPSSDDIKE 326
           I ICC T+PGL++STV+TLE LGLEI+QCVISCF+DFS+QASC E   Q+ + +S+  K+
Sbjct: 245 IDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVTSEATKQ 304

Query: 327 ALFRNAGYGGKCL 335
           AL RNAGYGG+CL
Sbjct: 305 ALIRNAGYGGRCL 315

[Close]

BLAST of Carg18497 vs. TAIR 10
Match: AT3G26744.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 3.7e-31
Identity = 96/218 (44.04%), Postives = 122/218 (55.96%), Query Frame = 0


Query: 147 ESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAERRRRRRLNDRLSMLRAIVPKISKMDR 206
           E N+S      +      K KK  G P+KNLMAERRRR++LNDRL MLR++VPKISKMDR
Sbjct: 280 EINESGKAAESVQIGGGGKGKK-KGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDR 339

Query: 207 TSILGDTIDYVKELLERINNLKEE-------------DSNH------ASLNGISKER--- 266
            SILGD IDY+KELL+RIN+L  E              S H       +L+   KE    
Sbjct: 340 ASILGDAIDYLKELLQRINDLHNELESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCP 399

Query: 267 ------KSNEVLFDVERKE-METRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFND 326
                 K  +   +V  +E     I + C  RPGLLL+T+  L+ LGL++QQ VISCFN 
Sbjct: 400 SSLPSPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG 459

Query: 327 FSMQA----SCSEGSSQKVVPSSDDIKEALFRNAGYGG 332
           F++       C EG  Q+++P  D IK  LF  AGY G
Sbjct: 460 FALDVFRAEQCQEG--QEILP--DQIKAVLFDTAGYAG 492

[Close]

BLAST of Carg18497 vs. TAIR 10
Match: AT3G26744.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 3.7e-31
Identity = 96/218 (44.04%), Postives = 122/218 (55.96%), Query Frame = 0


Query: 147 ESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAERRRRRRLNDRLSMLRAIVPKISKMDR 206
           E N+S      +      K KK  G P+KNLMAERRRR++LNDRL MLR++VPKISKMDR
Sbjct: 280 EINESGKAAESVQIGGGGKGKK-KGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDR 339

Query: 207 TSILGDTIDYVKELLERINNLKEE-------------DSNH------ASLNGISKER--- 266
            SILGD IDY+KELL+RIN+L  E              S H       +L+   KE    
Sbjct: 340 ASILGDAIDYLKELLQRINDLHNELESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCP 399

Query: 267 ------KSNEVLFDVERKE-METRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFND 326
                 K  +   +V  +E     I + C  RPGLLL+T+  L+ LGL++QQ VISCFN 
Sbjct: 400 SSLPSPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG 459

Query: 327 FSMQA----SCSEGSSQKVVPSSDDIKEALFRNAGYGG 332
           F++       C EG  Q+++P  D IK  LF  AGY G
Sbjct: 460 FALDVFRAEQCQEG--QEILP--DQIKAVLFDTAGYAG 492

[Close]

BLAST of Carg18497 vs. TAIR 10
Match: AT3G26744.4 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 3.7e-31
Identity = 96/218 (44.04%), Postives = 122/218 (55.96%), Query Frame = 0


Query: 147 ESNDSKMGVAELGKRRSNKAKKLDGQPSKNLMAERRRRRRLNDRLSMLRAIVPKISKMDR 206
           E N+S      +      K KK  G P+KNLMAERRRR++LNDRL MLR++VPKISKMDR
Sbjct: 280 EINESGKAAESVQIGGGGKGKK-KGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDR 339

Query: 207 TSILGDTIDYVKELLERINNLKEE-------------DSNH------ASLNGISKER--- 266
            SILGD IDY+KELL+RIN+L  E              S H       +L+   KE    
Sbjct: 340 ASILGDAIDYLKELLQRINDLHNELESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCP 399

Query: 267 ------KSNEVLFDVERKE-METRIGICCTTRPGLLLSTVNTLEALGLEIQQCVISCFND 326
                 K  +   +V  +E     I + C  RPGLLL+T+  L+ LGL++QQ VISCFN 
Sbjct: 400 SSLPSPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG 459

Query: 327 FSMQA----SCSEGSSQKVVPSSDDIKEALFRNAGYGG 332
           F++       C EG  Q+++P  D IK  LF  AGY G
Sbjct: 460 FALDVFRAEQCQEG--QEILP--DQIKAVLFDTAGYAG 492

The following BLAST results are available for this feature:

BLAST of Carg18497 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026884.1	2.3e-184	100.00	Transcription factor bHLH93, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6594921.1	1.4e-181	99.10	Transcription factor basic helix-loop-helix 93, partial [Cucurbita argyrosperma ...	[more]
XP_022963425.1	3.1e-181	98.80	transcription factor bHLH93 [Cucurbita moschata]	[more]
XP_023003752.1	1.1e-178	97.32	transcription factor bHLH93 [Cucurbita maxima]	[more]
XP_023517244.1	7.9e-177	96.73	transcription factor bHLH93 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg18497 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSL1	2.6e-61	43.39	Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1	[more]
Q9LXA9	9.4e-56	59.07	Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1	[more]
Q10S44	7.7e-50	58.33	Transcription factor BHLH3 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH3 PE=...	[more]
Q336V8	1.3e-41	53.19	Basic helix-loop-helix protein 004 OS=Oryza sativa subsp. japonica OX=39947 GN=B...	[more]
Q9LSE2	5.2e-30	44.04	Transcription factor ICE1 OS=Arabidopsis thaliana OX=3702 GN=SCRM PE=1 SV=1	[more]

BLAST of Carg18497 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HHY7	1.5e-181	98.80	transcription factor bHLH93 OS=Cucurbita moschata OX=3662 GN=LOC111463635 PE=4 S...	[more]
A0A6J1KNH7	5.3e-179	97.32	transcription factor bHLH93 OS=Cucurbita maxima OX=3661 GN=LOC111497242 PE=4 SV=...	[more]
A0A6J1GDE8	2.3e-145	80.29	transcription factor bHLH93-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1GCM1	5.6e-144	80.06	transcription factor bHLH93-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IPK2	1.2e-143	80.00	transcription factor bHLH93-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Carg18497 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65640.1	1.8e-62	43.39	beta HLH protein 93	[more]
AT5G10570.1	6.7e-57	59.07	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G26744.1	3.7e-31	44.04	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G26744.2	3.7e-31	44.04	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G26744.4	3.7e-31	44.04	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 210..230
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 2..334
None	No IPR available	PANTHER	PTHR31945:SF15	TRANSCRIPTION FACTOR BHLH61-RELATED	coord: 2..334
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 177..226 e-value: 1.8E-11 score: 54.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 177..220 e-value: 2.1E-9 score: 37.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 171..220 score: 15.249706
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 172..243 e-value: 6.3E-13 score: 50.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 174..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18497-RA	Carg18497-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding