Carg18486 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg18486
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr07: 2578393 .. 2580143 (+)
RNA-Seq ExpressionCarg18486
SyntenyCarg18486
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTATCTTTCAGCCGTTTCTCATTGTGGGTTTGGAATAGGAAGGAGAAGAAGTCTGTTGCTAATGGTTCTCCTTCGAGTTCTTCGTCTGAGTTTGGTAATGGATTGAGAGAATCAGAGCGTCTCAAATTCAAAAGGGGGGTGGGGTTGCCTTCATCGGCGAAGAAGGTCGAGAAGCAGCAATGGGGAAGTAAGAAAGAAACGAGGATTGAGTGGGAATGTGATTATGTGATGGTACCATCCGGCGGTGATGGCATGCAAATGTCGGAGTCTGACGCCCCTGGTGAGGCCGATTGGAGTATTGGTTGGTTGGAGCCTCACGGTCCTGGCTTTAAGAGTGATGATAGTTTTGCCGTTCTGGTGCCTTCGTATAGCAATCGTTGCAAGGAAGTGGTGGAGTGTTCAAATGTGGAGCTTCTGGCTGCCATCAAGAATCTTCAAACTGAGTTCTCACCTGGTATGGCCGGCCTTCTATTTGTTGTGTGTTTTCACTGTTCTTTTATCCAATGCTTTCTGTCATATTGGCTATTTGCTTATAGCTACAGAGATTTTTACTTGTTTGTTCCTTCATAATTCTTTAGTTGATCTTGAGAGTGTACGTGAGATGTGGACATCGGTTGGAGATGGTATGGTGAGGGAGAGGGAGAGGGTGTCCCTAACGGGCACGTTTTAAAAAGAGGGAAAACTCAGGGAAAGTCTAAAAAGAATAATATGAGTGGCATGAGCTATTACAAATAGTATTAGAACTAGACACCAGGCGGTGTGCGGACGTTGGCCCCGAGGGGGTGGATTGTGAGATCCCACATCGGTAGTTGGAGAGTAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCTGCGCAAAAACCTCAAGGAGAAGTCTAGAAGAGAAAGTCCAAAGAGATAATATATAAGGGTGTGGAAACCTCTCCCTAGTTGCGTAAAAACCTCAAGGAGAAGTCTGGAAGAGAGTGAGGTTGGGATATTATAGAACATGATGTTATGGTTTGTGCGGCAGTTGGCAGATAAAGCCTTGAATGGCTCTTAAGACATGATTCCTGAAATTTGGGAGCACATTCACTGGGCTTGTTTTGGAGCTGTTTTCGGCAGTAGTGATCCATGAATTGGTTTAAAAGCTTTTGATTTTCAATGGAAGAACTAAGTCATTGAATCCCTTCCTTGCGGAAAGAAAATTCTTTGGATCTTTCATTCCAGAGACTAGTTATACTTATTGAGTTATTTAGAGCTGGACTCGTATCTAAGTTATCGTTCGGGTGCATCGCATAAGTTACTAAAATAAATTTCATGACTTGAAGGAAGCAACATCACCCAACTTTAGCATCATGTCACCAAGTGTGTCCTTGGACAAGCATCGGATTTTAGATTAAAATGAAACATCATGGACTAAGGAAACATGTCGTGGTGGCAGCTCGTCGCACGTAGGGTGATAGATTTACAGCCAAATTTCTCCTCTTTGATGTGCTGTTTGGTGAGAGTTCTTTGCTGTCAATCTCATAGATTATGTAGGGAGAGATCACTATCCCAAATATGATGCCTTTTCATTCTGTATTTACATCATAAAAATGAAGGGATAAGGCAAAAGAGAAGCTTTCTTTTAATGGTTTTGCAGCTGCTGATGAATATCTTATCTTATGCAGAGAGCCAGAAGCACATGGAACTGTTGCTTTCTTCCCTGCAAAACTCCAAAGCCTGAAATGTGCAGGCATAGCATCATCTTGA

mRNA sequence

ATGGCGGTATCTTTCAGCCGTTTCTCATTGTGGGTTTGGAATAGGAAGGAGAAGAAGTCTGTTGCTAATGGTTCTCCTTCGAGTTCTTCGTCTGAGTTTGGTAATGGATTGAGAGAATCAGAGCGTCTCAAATTCAAAAGGGGGGTGGGGTTGCCTTCATCGGCGAAGAAGGTCGAGAAGCAGCAATGGGGAAGTAAGAAAGAAACGAGGATTGAGTGGGAATGTGATTATGTGATGGTACCATCCGGCGGTGATGGCATGCAAATGTCGGAGTCTGACGCCCCTGGTGAGGCCGATTGGAGTATTGGTTGGTTGGAGCCTCACGGTCCTGGCTTTAAGAGTGATGATAGTTTTGCCGTTCTGGTGCCTTCGTATAGCAATCGTTGCAAGGAAGTGGTGGAGTGTTCAAATGTGGAGCTTCTGGCTGCCATCAAGAATCTTCAAACTGAGTTCTCACCTGCTGCTGATGAATATCTTATCTTATGCAGAGAGCCAGAAGCACATGGAACTGTTGCTTTCTTCCCTGCAAAACTCCAAAGCCTGAAATGTGCAGGCATAGCATCATCTTGA

Coding sequence (CDS)

ATGGCGGTATCTTTCAGCCGTTTCTCATTGTGGGTTTGGAATAGGAAGGAGAAGAAGTCTGTTGCTAATGGTTCTCCTTCGAGTTCTTCGTCTGAGTTTGGTAATGGATTGAGAGAATCAGAGCGTCTCAAATTCAAAAGGGGGGTGGGGTTGCCTTCATCGGCGAAGAAGGTCGAGAAGCAGCAATGGGGAAGTAAGAAAGAAACGAGGATTGAGTGGGAATGTGATTATGTGATGGTACCATCCGGCGGTGATGGCATGCAAATGTCGGAGTCTGACGCCCCTGGTGAGGCCGATTGGAGTATTGGTTGGTTGGAGCCTCACGGTCCTGGCTTTAAGAGTGATGATAGTTTTGCCGTTCTGGTGCCTTCGTATAGCAATCGTTGCAAGGAAGTGGTGGAGTGTTCAAATGTGGAGCTTCTGGCTGCCATCAAGAATCTTCAAACTGAGTTCTCACCTGCTGCTGATGAATATCTTATCTTATGCAGAGAGCCAGAAGCACATGGAACTGTTGCTTTCTTCCCTGCAAAACTCCAAAGCCTGAAATGTGCAGGCATAGCATCATCTTGA

Protein sequence

MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEKQQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAVLVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPAADEYLILCREPEAHGTVAFFPAKLQSLKCAGIASS
Homology
[Close]
BLAST of Carg18486 vs. NCBI nr
Match: KAG7026873.1 (hypothetical protein SDJN02_10880, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 385.2 bits (988), Expect = 3.3e-103
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0 

Query: 1   MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK 60
           MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK
Sbjct: 1   MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK 60

Query: 61  QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV 120
           QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV
Sbjct: 61  QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV 120

Query: 121 LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPAADEYLILCREPEAHGTVAFFPAKLQS 180
           LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPAADEYLILCREPEAHGTVAFFPAKLQS
Sbjct: 121 LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPAADEYLILCREPEAHGTVAFFPAKLQS 180

Query: 181 LKCAGIASS 190
           LKCAGIASS
Sbjct: 181 LKCAGIASS 189

[Close]
BLAST of Carg18486 vs. NCBI nr
Match: XP_022962915.1 (uncharacterized protein LOC111463276 [Cucurbita moschata])

HSP 1 Score: 315.8 bits (808), Expect = 2.4e-82
Identity = 154/161 (95.65%), Postives = 158/161 (98.14%), Query Frame = 0 

Query: 1   MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK 60
           MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK
Sbjct: 1   MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK 60

Query: 61  QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV 120
           QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV
Sbjct: 61  QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV 120

Query: 121 LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPAADEYLIL 162
           LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSP + +++ L
Sbjct: 121 LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPESQKHMEL 161

[Close]
BLAST of Carg18486 vs. NCBI nr
Match: KAG6594907.1 (hypothetical protein SDJN03_11460, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 313.9 bits (803), Expect = 9.3e-82
Identity = 153/161 (95.03%), Postives = 158/161 (98.14%), Query Frame = 0 

Query: 1   MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK 60
           MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK
Sbjct: 1   MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK 60

Query: 61  QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV 120
           QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV
Sbjct: 61  QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV 120

Query: 121 LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPAADEYLIL 162
           LVPSYS+RCKEVVECSNVELLAAIKNLQTEFSP + +++ L
Sbjct: 121 LVPSYSHRCKEVVECSNVELLAAIKNLQTEFSPESQKHMEL 161

[Close]
BLAST of Carg18486 vs. NCBI nr
Match: XP_023518894.1 (uncharacterized protein LOC111782277 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311.6 bits (797), Expect = 4.6e-81
Identity = 152/161 (94.41%), Postives = 157/161 (97.52%), Query Frame = 0 

Query: 1   MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK 60
           MAVSFSRFSLWVWNRKEKKSVANGSPS+SSSEFGNGLRESERLKFKRGVGLPSSAKKVEK
Sbjct: 1   MAVSFSRFSLWVWNRKEKKSVANGSPSNSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK 60

Query: 61  QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV 120
           QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDA GEADWSIGWLEPHGPGFKSDDSFAV
Sbjct: 61  QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDASGEADWSIGWLEPHGPGFKSDDSFAV 120

Query: 121 LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPAADEYLIL 162
           LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSP + +++ L
Sbjct: 121 LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPESQKHMEL 161

[Close]
BLAST of Carg18486 vs. NCBI nr
Match: XP_023002981.1 (uncharacterized protein LOC111496728 [Cucurbita maxima])

HSP 1 Score: 305.1 bits (780), Expect = 4.3e-79
Identity = 147/161 (91.30%), Postives = 155/161 (96.27%), Query Frame = 0 

Query: 1   MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK 60
           MAVSFSRFS+WVWNRKEKKSV NGSP++SSSEFGNGLRE+ERLKFKRGVGLPSSAKKVEK
Sbjct: 1   MAVSFSRFSMWVWNRKEKKSVTNGSPTNSSSEFGNGLRETERLKFKRGVGLPSSAKKVEK 60

Query: 61  QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV 120
           QQWGSKKE RIEWECDYVMVPSGGDGMQMSESDA GEADWSIGWLEPHGPGFKSDDSFAV
Sbjct: 61  QQWGSKKENRIEWECDYVMVPSGGDGMQMSESDASGEADWSIGWLEPHGPGFKSDDSFAV 120

Query: 121 LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPAADEYLIL 162
           LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSP + +++ L
Sbjct: 121 LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPESQKHMEL 161

[Close]
BLAST of Carg18486 vs. ExPASy TrEMBL
Match: A0A6J1HGF0 (uncharacterized protein LOC111463276 OS=Cucurbita moschata OX=3662 GN=LOC111463276 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.2e-82
Identity = 154/161 (95.65%), Postives = 158/161 (98.14%), Query Frame = 0 

Query: 1   MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK 60
           MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK
Sbjct: 1   MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK 60

Query: 61  QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV 120
           QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV
Sbjct: 61  QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV 120

Query: 121 LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPAADEYLIL 162
           LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSP + +++ L
Sbjct: 121 LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPESQKHMEL 161

[Close]
BLAST of Carg18486 vs. ExPASy TrEMBL
Match: A0A6J1KMU6 (uncharacterized protein LOC111496728 OS=Cucurbita maxima OX=3661 GN=LOC111496728 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.1e-79
Identity = 147/161 (91.30%), Postives = 155/161 (96.27%), Query Frame = 0 

Query: 1   MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK 60
           MAVSFSRFS+WVWNRKEKKSV NGSP++SSSEFGNGLRE+ERLKFKRGVGLPSSAKKVEK
Sbjct: 1   MAVSFSRFSMWVWNRKEKKSVTNGSPTNSSSEFGNGLRETERLKFKRGVGLPSSAKKVEK 60

Query: 61  QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV 120
           QQWGSKKE RIEWECDYVMVPSGGDGMQMSESDA GEADWSIGWLEPHGPGFKSDDSFAV
Sbjct: 61  QQWGSKKENRIEWECDYVMVPSGGDGMQMSESDASGEADWSIGWLEPHGPGFKSDDSFAV 120

Query: 121 LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPAADEYLIL 162
           LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSP + +++ L
Sbjct: 121 LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPESQKHMEL 161

[Close]
BLAST of Carg18486 vs. ExPASy TrEMBL
Match: A0A1S3B0X6 (uncharacterized protein LOC103484930 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484930 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 7.5e-61
Identity = 126/161 (78.26%), Postives = 137/161 (85.09%), Query Frame = 0 

Query: 1   MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK 60
           MAVS SRFSLW WN KEK++VANGS  +SSSEFG GLRE E LKFKR V LPSS+KKV K
Sbjct: 1   MAVSLSRFSLWFWNGKEKETVANGSTPNSSSEFGTGLREPESLKFKR-VDLPSSSKKVNK 60

Query: 61  QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV 120
           Q+W SKKETRIEWE D+VMVPSGGD MQM  SD+  EADWSIGWLEPHGPGF+SDDSFAV
Sbjct: 61  QKWQSKKETRIEWEYDFVMVPSGGDDMQM--SDSGDEADWSIGWLEPHGPGFQSDDSFAV 120

Query: 121 LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPAADEYLIL 162
           LVPSYSNRCKEVVE SNVELLAAIK LQ EFSP + +Y+ L
Sbjct: 121 LVPSYSNRCKEVVEGSNVELLAAIKKLQNEFSPESKKYMEL 158

[Close]
BLAST of Carg18486 vs. ExPASy TrEMBL
Match: A0A1S3B1D7 (uncharacterized protein LOC103484930 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484930 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.7e-60
Identity = 125/154 (81.17%), Postives = 133/154 (86.36%), Query Frame = 0 

Query: 1   MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK 60
           MAVS SRFSLW WN KEK++VANGS  +SSSEFG GLRE E LKFKR V LPSS+KKV K
Sbjct: 1   MAVSLSRFSLWFWNGKEKETVANGSTPNSSSEFGTGLREPESLKFKR-VDLPSSSKKVNK 60

Query: 61  QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV 120
           Q+W SKKETRIEWE D+VMVPSGGD MQM  SD+  EADWSIGWLEPHGPGF+SDDSFAV
Sbjct: 61  QKWQSKKETRIEWEYDFVMVPSGGDDMQM--SDSGDEADWSIGWLEPHGPGFQSDDSFAV 120

Query: 121 LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPA 155
           LVPSYSNRCKEVVE SNVELLAAIK LQ EFSPA
Sbjct: 121 LVPSYSNRCKEVVEGSNVELLAAIKKLQNEFSPA 151

[Close]
BLAST of Carg18486 vs. ExPASy TrEMBL
Match: A0A5D3CMT4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003280 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 6.3e-60
Identity = 125/160 (78.12%), Postives = 134/160 (83.75%), Query Frame = 0 

Query: 1   MAVSFSRFSLWVWNRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSSAKKVEK 60
           MAVS SRFSLW WN KEK++VANGS  +SSSEFG GLRE E LKFKR V LPSS+KKV K
Sbjct: 1   MAVSLSRFSLWFWNGKEKETVANGSTPNSSSEFGTGLREPESLKFKR-VDLPSSSKKVNK 60

Query: 61  QQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGEADWSIGWLEPHGPGFKSDDSFAV 120
           Q+W SKKETRIEWE D+VMVPSGGD MQM  SD+  EADWSIGWLEPHGPGF+SDDSFAV
Sbjct: 61  QKWQSKKETRIEWEYDFVMVPSGGDDMQM--SDSGDEADWSIGWLEPHGPGFQSDDSFAV 120

Query: 121 LVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPAADEYLI 161
           LVPSYSNRCKEVVE SNVELLAAIK LQ EFSP    Y +
Sbjct: 121 LVPSYSNRCKEVVEGSNVELLAAIKKLQNEFSPGKAFYSV 157

[Close]
BLAST of Carg18486 vs. TAIR 10
Match: AT4G38060.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 5.4e-11
Identity = 45/130 (34.62%), Postives = 64/130 (49.23%), Query Frame = 0 

Query: 38  RESERLKFKRGVGLPSSAKKVEKQQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGE 97
           +E+E LKF   +   +  K++E + +GS                SG + + +   D P  
Sbjct: 20  KETEALKFPTKIARVNKRKELELESFGS----------------SGSESVDVVAGDGP-- 79

Query: 98  ADWSIGWLEPHGPGFKSDD-----SFAVLVPSYSNRCKEVVECS---NVELLAAIKNLQT 157
            +WS+GW EPHGP F+SDD      F VLVP Y    + VVE S   N +LL+A+KNL  
Sbjct: 80  -EWSVGWTEPHGPDFQSDDEGNDGGFLVLVPCY----RAVVEGSSNNNNQLLSAVKNLPN 126

Query: 158 EFSPAADEYL 160
              P    Y+
Sbjct: 140 GLPPDGKNYM 126

[Close]
BLAST of Carg18486 vs. TAIR 10
Match: AT4G38060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 2.7e-10
Identity = 44/124 (35.48%), Postives = 62/124 (50.00%), Query Frame = 0 

Query: 38  RESERLKFKRGVGLPSSAKKVEKQQWGSKKETRIEWECDYVMVPSGGDGMQMSESDAPGE 97
           +E+E LKF   +   +  K++E + +GS                SG + + +   D P  
Sbjct: 20  KETEALKFPTKIARVNKRKELELESFGS----------------SGSESVDVVAGDGP-- 79

Query: 98  ADWSIGWLEPHGPGFKSDD-----SFAVLVPSYSNRCKEVVECS---NVELLAAIKNLQT 154
            +WS+GW EPHGP F+SDD      F VLVP Y    + VVE S   N +LL+A+KNL  
Sbjct: 80  -EWSVGWTEPHGPDFQSDDEGNDGGFLVLVPCY----RAVVEGSSNNNNQLLSAVKNLPN 120

[Close]
BLAST of Carg18486 vs. TAIR 10
Match: AT5G65480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-09
Identity = 56/174 (32.18%), Postives = 79/174 (45.40%), Query Frame = 0 

Query: 1   MAVSFSRFSLWVW------NRKEKKSVANGSPSSSSSEFGNGLRESERLKFKRGVGLPSS 60
           MAVSF R   W+       +R++K+S+  GS S S S     L+++   K     G  SS
Sbjct: 1   MAVSFPRLPRWLCGGSNTKDREKKESIPKGSSSLSPS-----LKKTTTSK----TGSSSS 60

Query: 61  AKKVEKQQWGSKKETRIEWECDYVMVPSGGDGMQMSES-------DAPGEADWSIGWLEP 120
           + K  K+ W                +  GG G    E          P + +WSIGW+EP
Sbjct: 61  SVKKTKRGW----------------IGRGGSGSGGEEDKIGNVVFPEPDDPEWSIGWVEP 120

Query: 121 HGPGFKSDD----SFAVLVPSYSNRCKEVVECSNVELLAAIKNLQTEFSPAADE 158
           HGPGFK++D     F VLVP Y    K+V++ S  ++          FSPAA +
Sbjct: 121 HGPGFKAEDDDCGGFVVLVPLY----KKVMDGSGNQIPNGF------FSPAAPD 139

The following BLAST results are available for this feature:
BLAST of Carg18486 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7026873.13.3e-103100.00hypothetical protein SDJN02_10880, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022962915.12.4e-8295.65uncharacterized protein LOC111463276 [Cucurbita moschata][more]
KAG6594907.19.3e-8295.03hypothetical protein SDJN03_11460, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023518894.14.6e-8194.41uncharacterized protein LOC111782277 [Cucurbita pepo subsp. pepo][more]
XP_023002981.14.3e-7991.30uncharacterized protein LOC111496728 [Cucurbita maxima][more]
BLAST of Carg18486 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg18486 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HGF01.2e-8295.65uncharacterized protein LOC111463276 OS=Cucurbita moschata OX=3662 GN=LOC1114632... [more]
A0A6J1KMU62.1e-7991.30uncharacterized protein LOC111496728 OS=Cucurbita maxima OX=3661 GN=LOC111496728... [more]
A0A1S3B0X67.5e-6178.26uncharacterized protein LOC103484930 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3B1D73.7e-6081.17uncharacterized protein LOC103484930 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5D3CMT46.3e-6078.13Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Carg18486 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G38060.25.4e-1134.62unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G38060.12.7e-1035.48unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G65480.11.0e-0932.18unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..36
NoneNo IPR availablePANTHERPTHR34464:SF8BNAC03G61080D PROTEINcoord: 1..159
NoneNo IPR availablePANTHERPTHR34464OS09G0376300 PROTEINcoord: 1..159

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18486-RACarg18486-RAmRNA