
Carg18484 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTAATTCGCCTTACCCACCGATTATCCGCTTGGACCCTCTTTGAAAAAGACCCCCCTTCTCTCCAATCAATTCTTCTGCGAGCTGTACAGATGTCCATGTGTGTGAATCAGATGCTTTTACTCTCATCTGCCCTACTACTCCCTCTCATTCTCTCATAACCCATTTCCATTTCAATCAAACCTCTCATCTCCTTCATTTCAATCCATTTCTGCTTGTGTTTGCGTTTTCGCTCATCTCCAAGATCTGTGGTGATTTCGAGTTTTGTTGATGGTTTTGGTTATGGGACTCAATTTTCAGTCCAACAGAGCTGGAGCTCTTGCTGGTGTTTTTGTGCTGCTTTTTCCCGTTTTTCTACCGGGTTTGTTTAGCCCTTTGGGACATGCTTCTCCTTCCACGTTCTCGGTATGTCTTTGCCACTCTGTTCATTTTCTTTTTCCGTTTTGTTTGCTTGAAGGGCTTGAACATTTGATCTTCTGAGTCTTGTTTGTGAAATTATTTACTTGATGTTTTGATTTTTGAAGGGTTTCCGTAAATAGAAACATTTTTCTTTTTGGAACTGTAAAGACAAATTTCAGTGGCCTTCTTCATTTATAGTATGTGGGTATGAATGTTTGGTTCATAATTAGTTTAGTTTTAGGTGAATGGTACTCCATTAGGCCAGTATAAGTTAACTCTGGTTGAACCTAACCTGATTAGCATGGTTTGGATGTAAAAAGGAATGGTTAGTTTTAATCTCTATTTGTTCAACTTTTCCCCAGTGTTGACTAGTGGGTGGATTATGCACTACACTTGGGCTGTTTATGAGTTCTTAAGGCAATAATTGATGATTTAATTGGGTAATCTCTTGCAGGAATGGAACACTCCAAAGCCCAGGCACTCGCGTCTGCTGAAGAGTGCTTTACAACGCCGAAGTGTGGGTAAAAGTTGATTGATCATATTATTAAAGTTGTTTTAGTCTCCAACTATGTTCTTTTATGAACGAGAATCTTATATTGTTAAATTCTATTTCTATAACAGTCAAAACTGGATCAGTCTGATTTATGGGCTCCTTTGGCCGATGAAGGATGGAAGCCTTGTGTTGCTTCAAAAGCTTCCTGTAAGTCTGAGTTGTAGATCTTAGAAACTTCCCATGATCATTGATGTATTGAGCTTTATTCTGGATTAGTACTCGTACTTTCAAATACCCAAATTTAGTTTATCTTCTACTATTCGTTTGAAGTTAATTTTTTACCAATTTTTTAAAATGATAGTAACTAAATTTGGACATTTGAAAGTGCAATAACTAAATTTGAATGAAATCCAAACGACCAAAATGATATTTTATCATTAAAACATATTACTTGCTGAATTACTGATCATTTTCATGTCTGGTTTATGTCCTGCAGCAGTACCATGGAAGAGTGAAGGATATATCCAGGTGTTTCTTGATGGAGGGCTGAACCAACAAAGAATGGGAGTATGTGCGAGTTCATTAAGCGCGTGCGAGTTCATTTTGTTGATGATATCGTTTTCAAGTTTAAAACACTTACTTGATCCACATGCAGATATGTGATGCAGTAGCTGTTGCAAAAATTCTAAATGCAACCCTTGTGATTCCCTACCTTGAGACTAATCCTGTCTGGAAAGATTCAAGGTACTTAGAAACTTCGCTCTTCGTGGTATTATATACGAAAAAGTTATCACGAGATATATATATTTTTTTTCACTTATCCTTTGTTTTTTGGTATCTGCAGTTCTTTCATGGATATATTTGATGTAGACCACTTTATTAATGTGTTGAAGGATGACATTTCTATAGTTAAAGAACTGCCAGCTGAATTTTCTTGGAGTACTAGGGAATATTATGCTACAGCCATTCGGGCTACTCGAGTCAAAACAGCTCCTGTTCATGCCTCAGCCAACTGGTATCTTGACAATGTCTTACCGGTACTACAGAGGTTGGTATCGAAGTATATCCGTTCTGATCTTGTAGGAGCATGTGTACTTGTTTTATGTTCTTTTTCCAAATCAATTATTCAGCTATGGCATGGTTGAAATTTGTTATATATTGGTTTTACATTAGTTTTTTTGTATTACTGATTCAGCTACGGTATCGCTGCCATTGCACCCTTTTCACACCGTCTAACGTTTGAGAACTTGCCTGATGAGATACAAAGGCTGCGCTGTAAGGTCAACTTTCAAGCATTATTTTTTGTTCCTCATATCCGAGCACTAGGAGACGCTCTCATCGGTCGGCTGCGGTATCCTTCGAATAAGAGTGGAGCAAAGGAGGCTAACCACCCAAGTATGACCACTGTTGCAAATGATCAAGGTCCATTGAAGTTTGTTGTTCTACACCTTCGATTCGACAAGGTATAGCCATCCTCTTTGGATTTCCCTCAAGGTTTTAAAACGCATATGCTAGGGAGAGGTTTCCACAGTGTGTCCGTTTAAAGTTTCATAGCGGCTGATTTCTGTATGTTTGCCCTGAAGGACATGGCAGCTCATTCAGCCTGTGATTTTGGCGGGGGGAAAGCTGAAAAACTTGCTTTAGCCAAATATCGTCAAGTGCTCTGGCAGGGAAGGGTCCTTAACTCTCAGTTCACGGACGAGGAGTTGCGGAGTCAGGGGCGTTGCCCATTAACACCTGAAGAGATTGGTCTGCTGTTGGCTGCTTCGGGTTTTGACAACAATACCCGTCTATATCTGGCCTCCCACAAGGTAGTTTCCTTCTCTGTATACAAATAAACCAACTAAACTTGCTTATCTTTGGTTTGAAAGTGAAATTACTTCCATTACTTGCAACTCTAAAGTGCAAAACAACATGGTTTTTCAGGTATATGGTGGGGAAGCTAGGATTTCGACTTTGCGGAGTCTTTTTCCATTAATGGAAGACAAGAAGAGTCTCACTTCTGGAAGTGAACTAGCCCAAATCAAAGGAAAGGCTTCTTTGCTAGCTGCGGTTGATTACTATGTAAGCCTGCACAGTGACATTTTTATCTCGGCTTCTCCTGGAAATATGCATAATGCAATGGTGAGTTAAATTCTAGTTGATCCATATTTTGTCAAATCTTTCTGAACAAAATCTGTGCATTTTATACTAACACTTCCTGCAAGTTATGTATCTATTAAAACGATGATCATTCTTCTACTCGTTCTCGATATTTAACAGGTGGGTCATCGCACGTACGAGAACTTGAAGACCATACGACCAAACATGGCATTGTCGGGACAGCTTTTCATGAACAAAAGCATCATTTGGTCAGACTTTCAGCAGGCTATTGTTGAAGGCCACAAAAACAGACTAGGACAAATAAGGTTGAGAAAGCCAAAGCAGTCAATATACACATATCCAGCGCCTGATTGTGTTTGCCACAATTGAAATGATGTTCTTCTTCCACTTTCTATCACTAAAACAGACCACGTGTAACGGTGTAATACTATTTGTAGTAGCAGTCCTTCCTTATATATGGTATTATCAATCGGAAGTTCCTCTCCGGTCATCCTGATCATATGATGTTTCTAAAAACCAGGGCGAGGAACTATCTTAGTTTTGTAAAGATGTGTAGTATGCTATTATCTTCGATTATCGACAAATTATCTCAATGTAACGAGTTACTCCTGTATAAAGAATTGTTTATACAAATTACATAATCTTCGGTGCAGATTTTTGTTTGGTACGTCTCAAAAGATGGATAAGAGTTATTTTCTTGAACTTATCTAGACATTCGGGAAGGAAAAGAGACAGAAAAGAACAACGAATCCATGGTCCACTAATAAGCAAATAATGGAACATGTAAGAAGAGTTACACAGAGGGACAGAAACCTTGAAACAAATTTGAACACTAGCTCT CTTTAATTCGCCTTACCCACCGATTATCCGCTTGGACCCTCTTTGAAAAAGACCCCCCTTCTCTCCAATCAATTCTTCTGCGAGCTGTACAGATGTCCATGTGTGTGAATCAGATGCTTTTACTCTCATCTGCCCTACTACTCCCTCTCATTCTCTCATAACCCATTTCCATTTCAATCAAACCTCTCATCTCCTTCATTTCAATCCATTTCTGCTTGTGTTTGCGTTTTCGCTCATCTCCAAGATCTGTGGTGATTTCGAGTTTTGTTGATGGTTTTGGTTATGGGACTCAATTTTCAGTCCAACAGAGCTGGAGCTCTTGCTGGTGTTTTTGTGCTGCTTTTTCCCGTTTTTCTACCGGGTTTGTTTAGCCCTTTGGGACATGCTTCTCCTTCCACGTTCTCGGAATGGAACACTCCAAAGCCCAGGCACTCGCGTCTGCTGAAGAGTGCTTTACAACGCCGAAGTTCAAAACTGGATCAGTCTGATTTATGGGCTCCTTTGGCCGATGAAGGATGGAAGCCTTGTGTTGCTTCAAAAGCTTCCTCAGTACCATGGAAGAGTGAAGGATATATCCAGGTGTTTCTTGATGGAGGGCTGAACCAACAAAGAATGGGAATATGTGATGCAGTAGCTGTTGCAAAAATTCTAAATGCAACCCTTGTGATTCCCTACCTTGAGACTAATCCTGTCTGGAAAGATTCAAGTTCTTTCATGGATATATTTGATGTAGACCACTTTATTAATGTGTTGAAGGATGACATTTCTATAGTTAAAGAACTGCCAGCTGAATTTTCTTGGAGTACTAGGGAATATTATGCTACAGCCATTCGGGCTACTCGAGTCAAAACAGCTCCTGTTCATGCCTCAGCCAACTGGTATCTTGACAATGTCTTACCGGTACTACAGAGCTACGGTATCGCTGCCATTGCACCCTTTTCACACCGTCTAACGTTTGAGAACTTGCCTGATGAGATACAAAGGCTGCGCTGTAAGGTCAACTTTCAAGCATTATTTTTTGTTCCTCATATCCGAGCACTAGGAGACGCTCTCATCGGTCGGCTGCGGTATCCTTCGAATAAGAGTGGAGCAAAGGAGGCTAACCACCCAAGTATGACCACTGTTGCAAATGATCAAGGTCCATTGAAGTTTGTTGTTCTACACCTTCGATTCGACAAGGTATAGCCATCCTCTTTGGATTTCCCTCAAGGTTTTAAAACGCATATGCTAGGGAGAGGTTTCCACAGTGTGTCCGTTTAAAGTTTCATAGCGGCTGATTTCTGTATGTTTGCCCTGAAGGACATGGCAGCTCATTCAGCCTGTGATTTTGGCGGGGGGAAAGCTGAAAAACTTGCTTTAGCCAAATATCGTCAAGTGCTCTGGCAGGGAAGGGTCCTTAACTCTCAGTTCACGGACGAGGAGTTGCGGAGTCAGGGGCGTTGCCCATTAACACCTGAAGAGATTGGTCTGCTGTTGGCTGCTTCGGGTTTTGACAACAATACCCGTCTATATCTGGCCTCCCACAAGGTATATGGTGGGGAAGCTAGGATTTCGACTTTGCGGAGTCTTTTTCCATTAATGGAAGACAAGAAGAGTCTCACTTCTGGAAGTGAACTAGCCCAAATCAAAGGAAAGGCTTCTTTGCTAGCTGCGGTTGATTACTATGTAAGCCTGCACAGTGACATTTTTATCTCGGCTTCTCCTGGAAATATGCATAATGCAATGGTGGGTCATCGCACGTACGAGAACTTGAAGACCATACGACCAAACATGGCATTGTCGGGACAGCTTTTCATGAACAAAAGCATCATTTGGTCAGACTTTCAGCAGGCTATTGTTGAAGGCCACAAAAACAGACTAGGACAAATAAGGTTGAGAAAGCCAAAGCAGTCAATATACACATATCCAGCGCCTGATTGTGTTTGCCACAATTGAAATGATGTTCTTCTTCCACTTTCTATCACTAAAACAGACCACGTGTAACGGTGTAATACTATTTGTAGTAGCAGTCCTTCCTTATATATGGTATTATCAATCGGAAGTTCCTCTCCGGTCATCCTGATCATATGATGTTTCTAAAAACCAGGGCGAGGAACTATCTTAGTTTTGTAAAGATGTGTAGTATGCTATTATCTTCGATTATCGACAAATTATCTCAATGTAACGAGTTACTCCTGTATAAAGAATTGTTTATACAAATTACATAATCTTCGGTGCAGATTTTTGTTTGGTACGTCTCAAAAGATGGATAAGAGTTATTTTCTTGAACTTATCTAGACATTCGGGAAGGAAAAGAGACAGAAAAGAACAACGAATCCATGGTCCACTAATAAGCAAATAATGGAACATGTAAGAAGAGTTACACAGAGGGACAGAAACCTTGAAACAAATTTGAACACTAGCTCT ATGGTTTTGGTTATGGGACTCAATTTTCAGTCCAACAGAGCTGGAGCTCTTGCTGGTGTTTTTGTGCTGCTTTTTCCCGTTTTTCTACCGGGTTTGTTTAGCCCTTTGGGACATGCTTCTCCTTCCACGTTCTCGGAATGGAACACTCCAAAGCCCAGGCACTCGCGTCTGCTGAAGAGTGCTTTACAACGCCGAAGTTCAAAACTGGATCAGTCTGATTTATGGGCTCCTTTGGCCGATGAAGGATGGAAGCCTTGTGTTGCTTCAAAAGCTTCCTCAGTACCATGGAAGAGTGAAGGATATATCCAGGTGTTTCTTGATGGAGGGCTGAACCAACAAAGAATGGGAATATGTGATGCAGTAGCTGTTGCAAAAATTCTAAATGCAACCCTTGTGATTCCCTACCTTGAGACTAATCCTGTCTGGAAAGATTCAAGTTCTTTCATGGATATATTTGATGTAGACCACTTTATTAATGTGTTGAAGGATGACATTTCTATAGTTAAAGAACTGCCAGCTGAATTTTCTTGGAGTACTAGGGAATATTATGCTACAGCCATTCGGGCTACTCGAGTCAAAACAGCTCCTGTTCATGCCTCAGCCAACTGGTATCTTGACAATGTCTTACCGGTACTACAGAGCTACGGTATCGCTGCCATTGCACCCTTTTCACACCGTCTAACGTTTGAGAACTTGCCTGATGAGATACAAAGGCTGCGCTGTAAGGTCAACTTTCAAGCATTATTTTTTGTTCCTCATATCCGAGCACTAGGAGACGCTCTCATCGGTCGGCTGCGGTATCCTTCGAATAAGAGTGGAGCAAAGGAGGCTAACCACCCAAGTATGACCACTGTTGCAAATGATCAAGGTCCATTGAAGTTTGTTGTTCTACACCTTCGATTCGACAAGGTATAG MVLVMGLNFQSNRAGALAGVFVLLFPVFLPGLFSPLGHASPSTFSEWNTPKPRHSRLLKSALQRRSSKLDQSDLWAPLADEGWKPCVASKASSVPWKSEGYIQVFLDGGLNQQRMGICDAVAVAKILNATLVIPYLETNPVWKDSSSFMDIFDVDHFINVLKDDISIVKELPAEFSWSTREYYATAIRATRVKTAPVHASANWYLDNVLPVLQSYGIAAIAPFSHRLTFENLPDEIQRLRCKVNFQALFFVPHIRALGDALIGRLRYPSNKSGAKEANHPSMTTVANDQGPLKFVVLHLRFDKV Homology
BLAST of Carg18484 vs. NCBI nr
Match: KAG7026871.1 (hypothetical protein SDJN02_10878 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 618.2 bits (1593), Expect = 3.7e-173 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of Carg18484 vs. NCBI nr
Match: XP_023517617.1 (O-fucosyltransferase 39-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 612.5 bits (1578), Expect = 2.0e-171 Identity = 301/303 (99.34%), Postives = 302/303 (99.67%), Query Frame = 0
BLAST of Carg18484 vs. NCBI nr
Match: XP_022962898.1 (O-fucosyltransferase 39-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 611.3 bits (1575), Expect = 4.5e-171 Identity = 300/303 (99.01%), Postives = 303/303 (100.00%), Query Frame = 0
BLAST of Carg18484 vs. NCBI nr
Match: XP_023003987.1 (O-fucosyltransferase 39-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 609.8 bits (1571), Expect = 1.3e-170 Identity = 299/303 (98.68%), Postives = 302/303 (99.67%), Query Frame = 0
BLAST of Carg18484 vs. NCBI nr
Match: XP_023517618.1 (O-fucosyltransferase 39-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 605.1 bits (1559), Expect = 3.2e-169 Identity = 299/303 (98.68%), Postives = 301/303 (99.34%), Query Frame = 0
BLAST of Carg18484 vs. ExPASy Swiss-Prot
Match: Q7Y030 (O-fucosyltransferase 31 OS=Arabidopsis thaliana OX=3702 GN=OFUT31 PE=2 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 1.3e-115 Identity = 202/299 (67.56%), Postives = 240/299 (80.27%), Query Frame = 0
BLAST of Carg18484 vs. ExPASy Swiss-Prot
Match: Q0WUZ5 (O-fucosyltransferase 39 OS=Arabidopsis thaliana OX=3702 GN=OFUT39 PE=2 SV=1) HSP 1 Score: 377.5 bits (968), Expect = 1.4e-103 Identity = 190/269 (70.63%), Postives = 218/269 (81.04%), Query Frame = 0
BLAST of Carg18484 vs. ExPASy Swiss-Prot
Match: Q9LIN9 (Protein PECTIC ARABINOGALACTAN SYNTHESIS-RELATED OS=Arabidopsis thaliana OX=3702 GN=PAGR PE=2 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 3.0e-48 Identity = 101/230 (43.91%), Postives = 149/230 (64.78%), Query Frame = 0
BLAST of Carg18484 vs. ExPASy Swiss-Prot
Match: F4HZX7 (O-fucosyltransferase 8 OS=Arabidopsis thaliana OX=3702 GN=OFUT8 PE=2 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 9.8e-44 Identity = 107/270 (39.63%), Postives = 157/270 (58.15%), Query Frame = 0
BLAST of Carg18484 vs. ExPASy Swiss-Prot
Match: Q8H1E6 (O-fucosyltransferase 9 OS=Arabidopsis thaliana OX=3702 GN=OFUT9 PE=2 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 8.6e-40 Identity = 95/230 (41.30%), Postives = 127/230 (55.22%), Query Frame = 0
BLAST of Carg18484 vs. ExPASy TrEMBL
Match: A0A6J1HG51 (O-fucosyltransferase family protein OS=Cucurbita moschata OX=3662 GN=LOC111463266 PE=3 SV=1) HSP 1 Score: 611.3 bits (1575), Expect = 2.2e-171 Identity = 300/303 (99.01%), Postives = 303/303 (100.00%), Query Frame = 0
BLAST of Carg18484 vs. ExPASy TrEMBL
Match: A0A6J1KP51 (O-fucosyltransferase family protein OS=Cucurbita maxima OX=3661 GN=LOC111497437 PE=3 SV=1) HSP 1 Score: 609.8 bits (1571), Expect = 6.4e-171 Identity = 299/303 (98.68%), Postives = 302/303 (99.67%), Query Frame = 0
BLAST of Carg18484 vs. ExPASy TrEMBL
Match: A0A6J1HID8 (O-fucosyltransferase family protein OS=Cucurbita moschata OX=3662 GN=LOC111463266 PE=3 SV=1) HSP 1 Score: 604.0 bits (1556), Expect = 3.5e-169 Identity = 298/303 (98.35%), Postives = 302/303 (99.67%), Query Frame = 0
BLAST of Carg18484 vs. ExPASy TrEMBL
Match: A0A6J1KY71 (O-fucosyltransferase family protein OS=Cucurbita maxima OX=3661 GN=LOC111497437 PE=3 SV=1) HSP 1 Score: 602.4 bits (1552), Expect = 1.0e-168 Identity = 297/303 (98.02%), Postives = 301/303 (99.34%), Query Frame = 0
BLAST of Carg18484 vs. ExPASy TrEMBL
Match: A0A0A0KGN2 (O-fucosyltransferase family protein OS=Cucumis sativus OX=3659 GN=Csa_6G498990 PE=3 SV=1) HSP 1 Score: 540.8 bits (1392), Expect = 3.6e-150 Identity = 268/302 (88.74%), Postives = 283/302 (93.71%), Query Frame = 0
BLAST of Carg18484 vs. TAIR 10
Match: AT4G24530.1 (O-fucosyltransferase family protein ) HSP 1 Score: 417.5 bits (1072), Expect = 8.9e-117 Identity = 202/299 (67.56%), Postives = 240/299 (80.27%), Query Frame = 0
BLAST of Carg18484 vs. TAIR 10
Match: AT5G65470.1 (O-fucosyltransferase family protein ) HSP 1 Score: 377.5 bits (968), Expect = 1.0e-104 Identity = 190/269 (70.63%), Postives = 218/269 (81.04%), Query Frame = 0
BLAST of Carg18484 vs. TAIR 10
Match: AT3G26370.1 (O-fucosyltransferase family protein ) HSP 1 Score: 193.7 bits (491), Expect = 2.1e-49 Identity = 101/230 (43.91%), Postives = 149/230 (64.78%), Query Frame = 0
BLAST of Carg18484 vs. TAIR 10
Match: AT1G29200.1 (O-fucosyltransferase family protein ) HSP 1 Score: 178.7 bits (452), Expect = 7.0e-45 Identity = 107/270 (39.63%), Postives = 157/270 (58.15%), Query Frame = 0
BLAST of Carg18484 vs. TAIR 10
Match: AT1G29200.2 (O-fucosyltransferase family protein ) HSP 1 Score: 178.7 bits (452), Expect = 7.0e-45 Identity = 107/270 (39.63%), Postives = 157/270 (58.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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