Carg18431 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18431
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ribosomal protein
Location	Carg_Chr20: 814642 .. 817394 (+)
RNA-Seq Expression	Carg18431
Synteny	Carg18431

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCCTCCAAATCGCTCTGATTCCGGCGATCGTCTTTCCACCGGAATAAACAGTACCCCTGCAGCAGCCCCCGTTGATGGTTCGCCCGGAGATTCTAGCGGTGGAGCTGAGAAATTCAAGGGTTGTTGTGGGTTTCGAGAAAGGCTGAAGAGGCACCGTGAGGAGGTGGCCGGAAAAGTAACGGTGCCGGAGAAATGGGGAAAAGAGGAACTGCTCAAGGATTGGATCGATTACTCGGCGTTCGACAGAATCTTGGCCGCCGGCAGAATTGCGTCGGCGAGGGCGTCGCTTGTGGCGGAGGGACGGAGGGTAGAAAGTCGGTGTTGAGATGGAAAAAAATCAATTTAAATTACTTTTTAATTAAGCTTAATTAACGGCTTAATCGATTAATGTTATTTATAGAGAGAGATAAATACACGTTTTAATAGATTTCATTTGTATTTGTAAAACTAGCCCTACGGATTAATATGCAATAAATACTTTTAATTCTCTTTGTTTTATTTGACGATATGAAGCAACATGTCGTTTTTTGTCATCGATCGTCGTCCGTCTACAAAACTATGAACGAAAAAAGCCCATCATGGATCCAAAACTAAGGCCCATTAGACAACAAATTGGGCCAACAAACGGGCCCAATCTCAACTCGGTAATGGAAATAGAGGCCTAGGCCCATGTTTGTGTTCGCGAAACGGGCCCCAATCTATCACGAGCCCATCTCTTTGGATCGTCTCGTTTCGGTCTTCCATTATATATCTATTTATCAGTTGGCCGCGAAAAACCCTAGCCTCGTTTCTTCTTACCAGGTATTCATCCACGTTCTTTCGAATTGAAGTTTGTTTTGTTGAAACTGCTACTGAATTGCGTTGTTTCTTCTTCCCGATATTAAGTTATTGTTTCTCTCGATTTGGTTCGTCTAGCTCGCTCAATTAAATCGTATTTTGATTTGGTTTTCTTCTCAGCCAGTTTGTAGCTGCTGCTCAGGGAAGACAAGGCTCCGAAAATGAGGTATGTTGGGATGTTTTTTGCTATTTAGTTTTGTTTATCGTCTAGTATGTATTTTTTCAGAACGAACTTGATTAGTGCTACTGTCGTTTTTATTAGCTTTTCCGGATTCATAAATTTCGTTCGTGTTCTTTATTCCTGCAAGTAGTCTAAATGCATTTGACTGAGGTAGGTTTGGAAGTATGAAGTTACAATGCTGGAATTTACTTCTGGTTTTAGTTTAGTTTGTTCATGTTTCTGCCATCACGGCAGTCACATTACTTGTTTGTGCGTTTATACCAAAATAAAATCGAGTTTATTGGAAACTTTGGTTGCTCGTATCGTTTTGTTTTATGGTTATCTTGCCATTTACTGAATGTAGTTTTGTTGGTCTGTATCTGAAGCAAGCTTCAGAGCGAAGCGTTGAGAGAAGCCATTTCCTCTATCTTCGGTGATAGCAGTGAAAAGAAACGCAACTTTACTGAGACCATTGAACTTCAAATTGGACTGAAGAACTATGATCCACAGAAGGACAAGCGTTTCAGTGGATCAGTGAAGTTGCCCCATATCCCTCGCCCTAAGATGAAGATTTGCATGCTTGGAGATGCTTTGCACGTTGAAGAGGTAAGTTTTATCTGATCTTAACATCTTCACTTGTCATGTCCAGTAACTGTTATGTATGTTGCTTGCTTGCTTTAGTTCTGCTTTCAATGCTGCGTTTAAGGATATTTATGAGAAATTTCCCTAGTAATAAAATCTGGATAATGCATATAGTTTGTAGTATTTTTCATTCGTATTTGATGAACGATAAGTATTATGCTTCATGCTTCATGCTTACAAGCTGCAATTAGTGGATGTGTAGATAACTGGGAAAATAATGTACTTTTTTTGACATTTCATGTATGGTAAATTGAATTTGAATACTGATACACTTCATTTCTGGTTGTTTGCTTACATGTGTATGCTTTTGCTTATTATAGGCAGAGAAGATTGGTTTAGATTATATGGACGTGGAAGGTCTGAAGAAGCTAAACAAGAACAAGAAATTGGTAAAGAAACTTGCCAAAAAATATCACGCCTTTTTAGCTTCTGAAGCTGTTATCAAGCAAATTCCCCGTCTTCTGGGCCCTGGGCTCAACAAGGCAGGCAAGTGTGTTCATGACTACTAGTCATTCGGAATTTACCCTTTATCTGGTGACTCAAGTTTGGAAGCTTTTCTTAGCTTTCTCGGATCTTGGTACTTTATATTCTACTTGCTGTCCTGGCTCATTATTGGCTGCATGCTTGAAAATTGAATTTCAATCTTTTCTTTGGAAGAAGCAGTCTCTTTTGTTTGTAGTTCGTACTAATATGGATATCTGCATTGACATTGCAGGAAAGTTCCCTACCCTTGTTACTCACCAAGAATCCCTCGAGTCTAAAGTGAACGAGACTAAGGCAATGGTTAAGTTCCAGTTGAAGAAGGTTCTTTGCATGGGTGTGGCCGTGGGCAATGTTGCCATGGAGGAGAAGCAAGTTTTTCAGAACGTTCAAATGAGTGTCAATTTCCTCGTTTCCTTGTTGAAAAAGAACTGGCAAAATGTAAGTCGACAAAGTCAACTTCTCCATTCGCATACTCGAGGCTCGTCTTATTGCATGACGACAATTATATTTGTTTGTAGAATTCCTTGTCCTTTTATCTAACAATGAGATTTGGGTATTTTTTTGTTCATCAGGTGAGATGCTTGTACCTGAAGAGTACTATGGGGAAGGCATATCGAGTCTTCTGA

mRNA sequence

ATGGTTCCTCCAAATCGCTCTGATTCCGGCGATCGTCTTTCCACCGGAATAAACAGTACCCCTGCAGCAGCCCCCGTTGATGGTTCGCCCGGAGATTCTAGCGGTGGAGCTGAGAAATTCAAGGGTTGTTGTGGGTTTCGAGAAAGGCTGAAGAGGCACCGTGAGGAGGTGGCCGGAAAAGTAACGGTGCCGGAGAAATGGGGAAAAGAGGAACTGCTCAAGGATTGGATCGATTACTCGGCGTTCGACAGAATCTTGGCCGCCGGCAGAATTGCGTCGGCGAGGGCGTCGCTTGTGGCGGAGGGACGGAGGGTAGAAAGTCGCCAGTTTGTAGCTGCTGCTCAGGGAAGACAAGGCTCCGAAAATGAGCTTCAGAGCGAAGCGTTGAGAGAAGCCATTTCCTCTATCTTCGGTGATAGCAGTGAAAAGAAACGCAACTTTACTGAGACCATTGAACTTCAAATTGGACTGAAGAACTATGATCCACAGAAGGACAAGCGTTTCAGTGGATCAGTGAAGTTGCCCCATATCCCTCGCCCTAAGATGAAGATTTGCATGCTTGGAGATGCTTTGCACGTTGAAGAGGCAGAGAAGATTGGTTTAGATTATATGGACGTGGAAGGTCTGAAGAAGCTAAACAAGAACAAGAAATTGGCAAGTGTGTTCATGACTACTAGTCATTCGGAATTTACCCTTTATCTGGTGACTCAAGTTTGGAAGCTTTTCTTAGCTTTCTCGGATCTTGTTCGTACTAATATGGATATCTGCATTGACATTGCAGGAAAGTTCCCTACCCTTGTTACTCACCAAGAATCCCTCGAGTCTAAAGTGAACGAGACTAAGGCAATGGTTAAGTTCCAGTTGAAGAAGGTTCTTTGCATGGGTGTGGCCGTGGGCAATGTTGCCATGGAGGAGAAGCAAGTTTTTCAGAACGTTCAAATGAGTGTCAATTTCCTCGTTTCCTTGTTGAAAAAGAACTGGCAAAATGTGAGATGCTTGTACCTGAAGAGTACTATGGGGAAGGCATATCGAGTCTTCTGA

Coding sequence (CDS)

ATGGTTCCTCCAAATCGCTCTGATTCCGGCGATCGTCTTTCCACCGGAATAAACAGTACCCCTGCAGCAGCCCCCGTTGATGGTTCGCCCGGAGATTCTAGCGGTGGAGCTGAGAAATTCAAGGGTTGTTGTGGGTTTCGAGAAAGGCTGAAGAGGCACCGTGAGGAGGTGGCCGGAAAAGTAACGGTGCCGGAGAAATGGGGAAAAGAGGAACTGCTCAAGGATTGGATCGATTACTCGGCGTTCGACAGAATCTTGGCCGCCGGCAGAATTGCGTCGGCGAGGGCGTCGCTTGTGGCGGAGGGACGGAGGGTAGAAAGTCGCCAGTTTGTAGCTGCTGCTCAGGGAAGACAAGGCTCCGAAAATGAGCTTCAGAGCGAAGCGTTGAGAGAAGCCATTTCCTCTATCTTCGGTGATAGCAGTGAAAAGAAACGCAACTTTACTGAGACCATTGAACTTCAAATTGGACTGAAGAACTATGATCCACAGAAGGACAAGCGTTTCAGTGGATCAGTGAAGTTGCCCCATATCCCTCGCCCTAAGATGAAGATTTGCATGCTTGGAGATGCTTTGCACGTTGAAGAGGCAGAGAAGATTGGTTTAGATTATATGGACGTGGAAGGTCTGAAGAAGCTAAACAAGAACAAGAAATTGGCAAGTGTGTTCATGACTACTAGTCATTCGGAATTTACCCTTTATCTGGTGACTCAAGTTTGGAAGCTTTTCTTAGCTTTCTCGGATCTTGTTCGTACTAATATGGATATCTGCATTGACATTGCAGGAAAGTTCCCTACCCTTGTTACTCACCAAGAATCCCTCGAGTCTAAAGTGAACGAGACTAAGGCAATGGTTAAGTTCCAGTTGAAGAAGGTTCTTTGCATGGGTGTGGCCGTGGGCAATGTTGCCATGGAGGAGAAGCAAGTTTTTCAGAACGTTCAAATGAGTGTCAATTTCCTCGTTTCCTTGTTGAAAAAGAACTGGCAAAATGTGAGATGCTTGTACCTGAAGAGTACTATGGGGAAGGCATATCGAGTCTTCTGA

Protein sequence

MVPPNRSDSGDRLSTGINSTPAAAPVDGSPGDSSGGAEKFKGCCGFRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLVAEGRRVESRQFVAAAQGRQGSENELQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWKLFLAFSDLVRTNMDICIDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF

Homology

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BLAST of Carg18431 vs. NCBI nr
Match: KAG7010351.1 (60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 672.9 bits (1735), Expect = 1.4e-189
Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0


Query: 1   MVPPNRSDSGDRLSTGINSTPAAAPVDGSPGDSSGGAEKFKGCCGFRERLKRHREEVAGK 60
           MVPPNRSDSGDRLSTGINSTPAAAPVDGSPGDSSGGAEKFKGCCGFRERLKRHREEVAGK
Sbjct: 1   MVPPNRSDSGDRLSTGINSTPAAAPVDGSPGDSSGGAEKFKGCCGFRERLKRHREEVAGK 60

Query: 61  VTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLVAEGRRVESRQFVAAAQGRQGS 120
           VTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLVAEGRRVESRQFVAAAQGRQGS
Sbjct: 61  VTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLVAEGRRVESRQFVAAAQGRQGS 120

Query: 121 ENELQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 180
           ENELQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 121 ENELQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 180

Query: 181 KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWK 240
           KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWK
Sbjct: 181 KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWK 240

Query: 241 LFLAFSDLVRTNMDICIDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN 300
           LFLAFSDLVRTNMDICIDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN
Sbjct: 241 LFLAFSDLVRTNMDICIDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN 300

Query: 301 VAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 347
           VAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 301 VAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 346

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BLAST of Carg18431 vs. NCBI nr
Match: KAG6570486.1 (Protein HIRA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 536.2 bits (1380), Expect = 2.1e-148
Identity = 289/347 (83.29%), Postives = 300/347 (86.46%), Query Frame = 0


Query: 1   MVPPNRSDSGDRLSTGINSTPAAAPVDGSPGDSSGGAEKFKGCCGFRERLKRHREEVAGK 60
           MVPPNRSDSGDRLSTGINSTPAAAPVDGSPGDSSGGAEK KGCCGFRERLKRHREEVAGK
Sbjct: 1   MVPPNRSDSGDRLSTGINSTPAAAPVDGSPGDSSGGAEKLKGCCGFRERLKRHREEVAGK 60

Query: 61  VTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLVAEGRRVESRQFVAAAQGRQGS 120
           VTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLVAEGRR+  R+  A        
Sbjct: 61  VTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLVAEGRRLLLREDKAPKM----- 120

Query: 121 ENELQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 180
            ++LQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 121 -SKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 180

Query: 181 KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWK 240
           KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKL        H+            
Sbjct: 181 KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHA------------ 240

Query: 241 LFLAFSDLVRTNMDIC---IDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVA 300
            FLA   +++    +    ++ AGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVA
Sbjct: 241 -FLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVA 300

Query: 301 VGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 345
           VGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR
Sbjct: 301 VGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYR 328

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BLAST of Carg18431 vs. NCBI nr
Match: KAG7035940.1 (60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 413.3 bits (1061), Expect = 2.1e-111
Identity = 241/376 (64.10%), Postives = 257/376 (68.35%), Query Frame = 0


Query: 44  CGFRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLVAEGR 103
           CG RERLKRH EEVAGKV VPEKWGKEELLKDWIDYS FDRIL A RIASARASLVAEGR
Sbjct: 23  CGVRERLKRHCEEVAGKVMVPEKWGKEELLKDWIDYSTFDRILTADRIASARASLVAEGR 82

Query: 104 RVESRQ-----------------------------------------------FVAAAQG 163
           R   R                                                 ++A+  
Sbjct: 83  RSSPRSSSRSPLRVESLSPRLLFGSHLFGRPLYIYCQLPSKNPSLASSHQNTILISASAA 142

Query: 164 ---------------------RQGSENELQSEALREAISSIFGDSSEKKRNFTETIELQI 223
                                + G  ++LQSEALREAISSIFGDS+EKKRNFTETIELQI
Sbjct: 143 VYVKYAVAINLVRVLFSWKIWKYGVASKLQSEALREAISSIFGDSTEKKRNFTETIELQI 202

Query: 224 GLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKN 283
           GLKNYDPQKDKRFSGSVKLPHIPRPKMK+CMLGDALHVEEAEKIG+DYMDVEGLKKLNKN
Sbjct: 203 GLKNYDPQKDKRFSGSVKLPHIPRPKMKLCMLGDALHVEEAEKIGMDYMDVEGLKKLNKN 262

Query: 284 KKLASVFMTTSHSEFTLYLVTQVWKLFLAFSDLVRTNMDIC---IDIAG--KFPTLVTHQ 343
           KKL        H+             FLA   +++    +    ++ AG  KFPTLVTHQ
Sbjct: 263 KKLVKKLAKKYHA-------------FLASEAVIKQIPRLLGPGLNKAGKCKFPTLVTHQ 322

Query: 344 ESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNV 347
           ESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
Sbjct: 323 ESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNV 382

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BLAST of Carg18431 vs. NCBI nr
Match: KAF2321621.1 (hypothetical protein GH714_000675 [Hevea brasiliensis])

HSP 1 Score: 384.4 bits (986), Expect = 1.0e-102
Identity = 210/305 (68.85%), Postives = 237/305 (77.70%), Query Frame = 0


Query: 45  GFRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLVAEGRR 104
           G RERLKRHREEVAGKV +P+ W +E  L DWIDYS+FD++LAA  IASAR +L+A+GRR
Sbjct: 89  GGRERLKRHREEVAGKVMIPDAWNQENFLMDWIDYSSFDKLLAANGIASAREALMAQGRR 148

Query: 105 VESRQFVAAAQGRQGSENELQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQK 164
                  A++Q  +   ++LQSEALREAIS+I   S EKKRNFTETIELQIGLKNYDPQK
Sbjct: 149 GR-----ASSQRLRIESSKLQSEALREAISTIMTASKEKKRNFTETIELQIGLKNYDPQK 208

Query: 165 DKRFSGSVKLPHIPRPKMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMT 224
           DKRFSGSVKLPHIPRPKMKICMLGDA HVEEAE IGL +MDVE LKKLNKNKKL      
Sbjct: 209 DKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEGIGLQWMDVEALKKLNKNKKLVKKLAK 268

Query: 225 TSHSEFTLYLVTQVWKLFLAFSDLVRTNMDIC---IDIAGKFPTLVTHQESLESKVNETK 284
             H+             FLA   +++    +    ++ AGKFPTLVTHQESLESKVNETK
Sbjct: 269 QYHA-------------FLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETK 328

Query: 285 AMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK 344
           A VKFQLKKVLCMGVAVGN AMEEKQVFQNVQMSVNFLVSLLKKNWQNV+CL+LK+TMG 
Sbjct: 329 ATVKFQLKKVLCMGVAVGNCAMEEKQVFQNVQMSVNFLVSLLKKNWQNVKCLHLKTTMGA 375

Query: 345 AYRVF 347
             R+F
Sbjct: 389 PQRIF 375

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BLAST of Carg18431 vs. NCBI nr
Match: KAB2028213.1 (hypothetical protein ES319_D05G083700v1, partial [Gossypium barbadense])

HSP 1 Score: 358.2 bits (918), Expect = 7.9e-95
Identity = 206/322 (63.98%), Postives = 233/322 (72.36%), Query Frame = 0


Query: 31  GDSSGGAEKFKGCCGFRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAGR 90
           G  S G +K  G    RERLKRHREEVAG+V VP+KWGKEELLKDW+DYS+FD +LA   
Sbjct: 14  GHCSDGNDKDSG----RERLKRHREEVAGRVLVPDKWGKEELLKDWMDYSSFDSLLAPTG 73

Query: 91  IASARASLVAEGRRVESRQFVAAAQGRQGSENELQSEALREAISSIFGDSSEKKRNFTET 150
           +ASAR +L+ EGRR  S++ +          ++LQS+ALREAIS+I   S EK+R FTET
Sbjct: 74  LASARKALMTEGRRSSSQRLMRIQNFGILIYSKLQSDALREAISTIVAQSKEKQRKFTET 133

Query: 151 IELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDALHVEEAEKIGLDYMDVEGLK 210
           IELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDA HVEE               
Sbjct: 134 IELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEE--------------- 193

Query: 211 KLNKNKKLASVFMTTSHSEFTLYLVTQVWKLFLAFSDLVRTNMDIC---IDIAG---KFP 270
           KLNKNKKL        H+             FLA   +++    +    ++ AG   KFP
Sbjct: 194 KLNKNKKLVKKLAKKYHA-------------FLASESVIKQIPRLLGPGLNKAGKCCKFP 253

Query: 271 TLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLK 330
           TLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQ+FQNVQMSVNFLVSLLK
Sbjct: 254 TLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQIFQNVQMSVNFLVSLLK 303

Query: 331 KNWQNVRCLYLKSTMGKAYRVF 347
           KNWQNVRCLYLKSTMG + R+F
Sbjct: 314 KNWQNVRCLYLKSTMGPSNRIF 303

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BLAST of Carg18431 vs. ExPASy Swiss-Prot
Match: B8B9K6 (60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.9e-83
Identity = 163/228 (71.49%), Postives = 183/228 (80.26%), Query Frame = 0


Query: 122 NELQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 181
           ++LQSE L+EAIS + G+S EK R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 182 MKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWKL 241
           MK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKL        H+             
Sbjct: 62  MKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHA------------- 121

Query: 242 FLAFSDLVRTNMDIC---IDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAV 301
           FLA   +++    +    ++ AGKFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAV
Sbjct: 122 FLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAV 181

Query: 302 GNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 347
           GN++MEEKQ+ QN+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 182 GNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of Carg18431 vs. ExPASy Swiss-Prot
Match: B7F845 (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.9e-83
Identity = 163/228 (71.49%), Postives = 183/228 (80.26%), Query Frame = 0


Query: 122 NELQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 181
           ++LQSE L+EAIS + G+S EK R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 182 MKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWKL 241
           MK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKL        H+             
Sbjct: 62  MKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHA------------- 121

Query: 242 FLAFSDLVRTNMDIC---IDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAV 301
           FLA   +++    +    ++ AGKFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAV
Sbjct: 122 FLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAV 181

Query: 302 GNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 347
           GN++MEEKQ+ QN+QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 182 GNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of Carg18431 vs. ExPASy Swiss-Prot
Match: Q8VZB9 (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 2.1e-82
Identity = 164/228 (71.93%), Postives = 183/228 (80.26%), Query Frame = 0


Query: 122 NELQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 181
           ++LQSEA+REAI++I G S  KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 182 MKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWKL 241
           MKICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKL        H+             
Sbjct: 62  MKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHA------------- 121

Query: 242 FLAFSDLVRTNMDIC---IDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAV 301
           FLA   +++    +    ++ AGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAV
Sbjct: 122 FLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAV 181

Query: 302 GNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 347
           GN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 182 GNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Carg18431 vs. ExPASy Swiss-Prot
Match: P59230 (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 2.7e-82
Identity = 163/228 (71.49%), Postives = 184/228 (80.70%), Query Frame = 0


Query: 122 NELQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 181
           ++LQSEA+REAI++I G S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 182 MKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWKL 241
           MKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKL      + H+             
Sbjct: 62  MKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHA------------- 121

Query: 242 FLAFSDLVRTNMDIC---IDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAV 301
           FLA   +++    +    ++ AGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAV
Sbjct: 122 FLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAV 181

Query: 302 GNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 347
           GN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 182 GNLSMEEKQLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Carg18431 vs. ExPASy Swiss-Prot
Match: P59231 (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 3.0e-81
Identity = 166/229 (72.49%), Postives = 182/229 (79.48%), Query Frame = 0


Query: 122 NELQSEALREAISSIFGDSSE-KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 181
           ++LQSEA+REAISSI     E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PRP
Sbjct: 2   SKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRP 61

Query: 182 KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWK 241
           KMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKL        H+            
Sbjct: 62  KMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHA------------ 121

Query: 242 LFLAFSDLVRTNMDIC---IDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVA 301
            FLA   +++    +    ++ AGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVA
Sbjct: 122 -FLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVA 181

Query: 302 VGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 347
           VGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 182 VGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Carg18431 vs. ExPASy TrEMBL
Match: A0A6A6N623 (Ribosomal protein OS=Hevea brasiliensis OX=3981 GN=GH714_000675 PE=3 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 5.0e-103
Identity = 210/305 (68.85%), Postives = 237/305 (77.70%), Query Frame = 0


Query: 45  GFRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLVAEGRR 104
           G RERLKRHREEVAGKV +P+ W +E  L DWIDYS+FD++LAA  IASAR +L+A+GRR
Sbjct: 89  GGRERLKRHREEVAGKVMIPDAWNQENFLMDWIDYSSFDKLLAANGIASAREALMAQGRR 148

Query: 105 VESRQFVAAAQGRQGSENELQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQK 164
                  A++Q  +   ++LQSEALREAIS+I   S EKKRNFTETIELQIGLKNYDPQK
Sbjct: 149 GR-----ASSQRLRIESSKLQSEALREAISTIMTASKEKKRNFTETIELQIGLKNYDPQK 208

Query: 165 DKRFSGSVKLPHIPRPKMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMT 224
           DKRFSGSVKLPHIPRPKMKICMLGDA HVEEAE IGL +MDVE LKKLNKNKKL      
Sbjct: 209 DKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEGIGLQWMDVEALKKLNKNKKLVKKLAK 268

Query: 225 TSHSEFTLYLVTQVWKLFLAFSDLVRTNMDIC---IDIAGKFPTLVTHQESLESKVNETK 284
             H+             FLA   +++    +    ++ AGKFPTLVTHQESLESKVNETK
Sbjct: 269 QYHA-------------FLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETK 328

Query: 285 AMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGK 344
           A VKFQLKKVLCMGVAVGN AMEEKQVFQNVQMSVNFLVSLLKKNWQNV+CL+LK+TMG 
Sbjct: 329 ATVKFQLKKVLCMGVAVGNCAMEEKQVFQNVQMSVNFLVSLLKKNWQNVKCLHLKTTMGA 375

Query: 345 AYRVF 347
             R+F
Sbjct: 389 PQRIF 375

[Close]

BLAST of Carg18431 vs. ExPASy TrEMBL
Match: F6HHG2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0080g00400 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 5.7e-99
Identity = 211/339 (62.24%), Postives = 243/339 (71.68%), Query Frame = 0


Query: 47  RERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAGRIASARASLVAEGR--- 106
           R+RL+RH  EV GKV +P+KWGKE+LLK+WIDYS+FD +LA   I  AR +LVA GR   
Sbjct: 58  RQRLRRHWSEVGGKVLIPDKWGKEDLLKEWIDYSSFDALLAPNGIGVAREALVAAGRGAS 117

Query: 107 ----RVESR-------------QFVAAAQGR--------------QGSENELQSEALREA 166
               R+ SR               V   +GR              + +  +LQS+ALREA
Sbjct: 118 TQGLRISSRLAARVFFISSGKKPVVDPLEGRGFKHERSVHPTWINEDAGAKLQSDALREA 177

Query: 167 ISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDALH 226
           I++I  +S EKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMK+CMLGDA H
Sbjct: 178 ITNIVNESKEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQH 237

Query: 227 VEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWKLFLAFSDLVRTN 286
           VEEAEKIGL+YMDVEGLKKLNKNKKL        H+             FLA   +++  
Sbjct: 238 VEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHA-------------FLASEAVIKQI 297

Query: 287 MDIC---IDIAGK--FPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQ 346
             +    ++ AGK  FPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN +MEEKQ
Sbjct: 298 PRLLGPGLNKAGKKIFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNCSMEEKQ 357

[Close]

BLAST of Carg18431 vs. ExPASy TrEMBL
Match: A0A5J5RB30 (Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_D05G083700v1 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 3.8e-95
Identity = 206/322 (63.98%), Postives = 233/322 (72.36%), Query Frame = 0


Query: 31  GDSSGGAEKFKGCCGFRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAGR 90
           G  S G +K  G    RERLKRHREEVAG+V VP+KWGKEELLKDW+DYS+FD +LA   
Sbjct: 14  GHCSDGNDKDSG----RERLKRHREEVAGRVLVPDKWGKEELLKDWMDYSSFDSLLAPTG 73

Query: 91  IASARASLVAEGRRVESRQFVAAAQGRQGSENELQSEALREAISSIFGDSSEKKRNFTET 150
           +ASAR +L+ EGRR  S++ +          ++LQS+ALREAIS+I   S EK+R FTET
Sbjct: 74  LASARKALMTEGRRSSSQRLMRIQNFGILIYSKLQSDALREAISTIVAQSKEKQRKFTET 133

Query: 151 IELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDALHVEEAEKIGLDYMDVEGLK 210
           IELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDA HVEE               
Sbjct: 134 IELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEE--------------- 193

Query: 211 KLNKNKKLASVFMTTSHSEFTLYLVTQVWKLFLAFSDLVRTNMDIC---IDIAG---KFP 270
           KLNKNKKL        H+             FLA   +++    +    ++ AG   KFP
Sbjct: 194 KLNKNKKLVKKLAKKYHA-------------FLASESVIKQIPRLLGPGLNKAGKCCKFP 253

Query: 271 TLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLK 330
           TLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQ+FQNVQMSVNFLVSLLK
Sbjct: 254 TLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQIFQNVQMSVNFLVSLLK 303

Query: 331 KNWQNVRCLYLKSTMGKAYRVF 347
           KNWQNVRCLYLKSTMG + R+F
Sbjct: 314 KNWQNVRCLYLKSTMGPSNRIF 303

[Close]

BLAST of Carg18431 vs. ExPASy TrEMBL
Match: A0A6J1JCI3 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111483802 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.1e-91
Identity = 186/228 (81.58%), Postives = 195/228 (85.53%), Query Frame = 0


Query: 122 NELQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 181
           ++LQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 182 MKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWKL 241
           MKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKL        H+             
Sbjct: 62  MKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHA------------- 121

Query: 242 FLAFSDLVRTNMDIC---IDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAV 301
           FLA   +++    +    ++ AGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAV
Sbjct: 122 FLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAV 181

Query: 302 GNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 347
           GNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 182 GNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Carg18431 vs. ExPASy TrEMBL
Match: A0A6J1FXB0 (Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111448383 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.1e-91
Identity = 186/228 (81.58%), Postives = 195/228 (85.53%), Query Frame = 0


Query: 122 NELQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 181
           ++LQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 182 MKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWKL 241
           MKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKL        H+             
Sbjct: 62  MKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHA------------- 121

Query: 242 FLAFSDLVRTNMDIC---IDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAV 301
           FLA   +++    +    ++ AGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAV
Sbjct: 122 FLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAV 181

Query: 302 GNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 347
           GNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF
Sbjct: 182 GNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Carg18431 vs. TAIR 10
Match: AT1G08360.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 307.4 bits (786), Expect = 1.5e-83
Identity = 164/228 (71.93%), Postives = 183/228 (80.26%), Query Frame = 0


Query: 122 NELQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 181
           ++LQSEA+REAI++I G S  KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 182 MKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWKL 241
           MKICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKL        H+             
Sbjct: 62  MKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHA------------- 121

Query: 242 FLAFSDLVRTNMDIC---IDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAV 301
           FLA   +++    +    ++ AGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAV
Sbjct: 122 FLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAV 181

Query: 302 GNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 347
           GN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 182 GNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Carg18431 vs. TAIR 10
Match: AT2G27530.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 307.0 bits (785), Expect = 1.9e-83
Identity = 163/228 (71.49%), Postives = 184/228 (80.70%), Query Frame = 0


Query: 122 NELQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 181
           ++LQSEA+REAI++I G S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 182 MKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWKL 241
           MKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKL      + H+             
Sbjct: 62  MKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHA------------- 121

Query: 242 FLAFSDLVRTNMDIC---IDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAV 301
           FLA   +++    +    ++ AGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAV
Sbjct: 122 FLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAV 181

Query: 302 GNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 347
           GN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 182 GNLSMEEKQLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Carg18431 vs. TAIR 10
Match: AT2G27530.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 307.0 bits (785), Expect = 1.9e-83
Identity = 163/228 (71.49%), Postives = 184/228 (80.70%), Query Frame = 0


Query: 122 NELQSEALREAISSIFGDSSEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 181
           ++LQSEA+REAI++I G S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 182 MKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWKL 241
           MKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKL      + H+             
Sbjct: 62  MKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHA------------- 121

Query: 242 FLAFSDLVRTNMDIC---IDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAV 301
           FLA   +++    +    ++ AGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAV
Sbjct: 122 FLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAV 181

Query: 302 GNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 347
           GN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 182 GNLSMEEKQLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Carg18431 vs. TAIR 10
Match: AT5G22440.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 303.5 bits (776), Expect = 2.1e-82
Identity = 166/229 (72.49%), Postives = 182/229 (79.48%), Query Frame = 0


Query: 122 NELQSEALREAISSIFGDSSE-KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 181
           ++LQSEA+REAISSI     E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PRP
Sbjct: 2   SKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRP 61

Query: 182 KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWK 241
           KMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKL        H+            
Sbjct: 62  KMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHA------------ 121

Query: 242 LFLAFSDLVRTNMDIC---IDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVA 301
            FLA   +++    +    ++ AGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVA
Sbjct: 122 -FLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVA 181

Query: 302 VGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 347
           VGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 182 VGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Carg18431 vs. TAIR 10
Match: AT5G22440.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 303.5 bits (776), Expect = 2.1e-82
Identity = 166/229 (72.49%), Postives = 182/229 (79.48%), Query Frame = 0


Query: 122 NELQSEALREAISSIFGDSSE-KKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 181
           ++LQSEA+REAISSI     E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PRP
Sbjct: 2   SKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRP 61

Query: 182 KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLASVFMTTSHSEFTLYLVTQVWK 241
           KMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKL        H+            
Sbjct: 62  KMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHA------------ 121

Query: 242 LFLAFSDLVRTNMDIC---IDIAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVA 301
            FLA   +++    +    ++ AGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVA
Sbjct: 122 -FLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVA 181

Query: 302 VGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 347
           VGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 182 VGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

The following BLAST results are available for this feature:

BLAST of Carg18431 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010351.1	1.4e-189	100.00	60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6570486.1	2.1e-148	83.29	Protein HIRA, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7035940.1	2.1e-111	64.10	60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAF2321621.1	1.0e-102	68.85	hypothetical protein GH714_000675 [Hevea brasiliensis]	[more]
KAB2028213.1	7.9e-95	63.98	hypothetical protein ES319_D05G083700v1, partial [Gossypium barbadense]	[more]

BLAST of Carg18431 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8B9K6	1.9e-83	71.49	60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3...	[more]
B7F845	1.9e-83	71.49	60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE...	[more]
Q8VZB9	2.1e-82	71.93	60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=...	[more]
P59230	2.7e-82	71.49	60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=...	[more]
P59231	3.0e-81	72.49	60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=...	[more]

BLAST of Carg18431 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A6N623	5.0e-103	68.85	Ribosomal protein OS=Hevea brasiliensis OX=3981 GN=GH714_000675 PE=3 SV=1	[more]
F6HHG2	5.7e-99	62.24	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0080g00400 PE=4 SV=...	[more]
A0A5J5RB30	3.8e-95	63.98	Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_D05G...	[more]
A0A6J1JCI3	1.1e-91	81.58	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111483802 PE=3 SV=1	[more]
A0A6J1FXB0	1.1e-91	81.58	Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111448383 PE=3 SV=1	[more]

BLAST of Carg18431 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08360.1	1.5e-83	71.93	Ribosomal protein L1p/L10e family	[more]
AT2G27530.1	1.9e-83	71.49	Ribosomal protein L1p/L10e family	[more]
AT2G27530.2	1.9e-83	71.49	Ribosomal protein L1p/L10e family	[more]
AT5G22440.1	2.1e-82	72.49	Ribosomal protein L1p/L10e family	[more]
AT5G22440.2	2.1e-82	72.49	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.190.20		coord: 266..344 e-value: 1.5E-20 score: 75.5 coord: 122..230 e-value: 8.6E-32 score: 111.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 123..344
None	No IPR available	PANTHER	PTHR23105:SF164	60S RIBOSOMAL PROTEIN L10A-3	coord: 123..344
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 260..340 e-value: 7.1E-16 score: 58.6 coord: 143..220 e-value: 1.8E-9 score: 37.6
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 129..345 e-value: 1.00671E-49 score: 163.509
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 130..345

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18431-RA	Carg18431-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome