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Carg18419 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAAAGCATAACGCGAAGCACAAGACGGCTTAACCGAGGTTGACGGCGGAGTCAAGAAGTTTTGTTTTCCCAATTCCGAAAGCCTTAAAGAAACGAATTCCAGTTAGAATTTGTGACAAACAAAACCAACACAAACTGGAATCCAAGGGGAAGGGGACAATGGGAGGAGTTTCAAGAGAGGCGGAGATGTCAATGGCAGCTCTGTCCATGTTCCCCGGCTTCAGATTTTCCCCCAAAGACGAAGAACTGATTTTATTTTACCTCAAGAAGAAGCTCCAAGGCTCCGACGACAGCGTCGATGTCATTTCCGAGATCGAGATTTGCAAATTCGAGCCATGGGACCTTCCCGGTTTGCCCTTTTCTCCTTCCTTCCTTCCTTCCTTTCTTCCTTCATCACTTCCTATCTAAACAGGGCTGATTTGGTCATTTTTAATTTGGTTTTCAAAACAGGGAAATCGAGAATCCCTTCCGACAACGAGTGGTTCTTCTTCTCTCCGAGAGGAAGAAAATACCCAAACGGAACACAGAACAAGAGGGCGACTGAATTGGGGTACTGGAAGGCCACCGGAAAAGAGCGAAACGTGAAGTCCGGCTCGGAGATTATCGGAACAAAGAGGACTCTGGTTTTCCATTTAGGACGTGCTCCAACAGGGGAGAGAACAGAGTGGATTATGCACGAGTATTGCTTGAACGACACCTCCCAGGTCAAATTCAATTGCAATTCCTCCTTCCTTTTCCTTTGCTGCTTACGTAAACTACTGTATGACAGCAGGATTCTAATTCCATGGTGGTTTGTCGTCTCCGGAAGAACAACGATTTTCGCCGGAACAACTCCGACAAGGCGGGTTCGAGTAAAGTGCAGGGTTCCGGCGAGGATGGGGACGGCGGAGTTGGACAGAAGGTGGGGGGTGAAAGCGATAGGCTTTCGAAGAACTGCAGCAGTAGTTTCGATTCTCATTCGCTGGAGCAAACTGATTCGGGCATTGAATTCCGTCGCAAAGAAACGTCCGACCCGGCGCTGCACGAATCCCTCAGTCCTGAAAAGGTCAGCTTCGTCAGATTCTCACGTTCAATTGCACAATTCCCAAATCCGTCGCTTTGCCTTTTTTTAAATTTCTATTTTATTTTTTTAATATTAAAAATAGCTAACTTTTTTTTTTTATATTAAAAATAGATATAAATATATATAATTATATGGTAAGAAAAATGTTTTTTTTTTCCCGAGTCATAAAAAAATGATTGGATGTCAATCTTTGAAGGGTAACGGTGAAGATGAAGAGTTGTATGCGGATTTGTTGAAAGACGACATAATTACATTGGACGATAATTTGCTATCTGCAACTCACAATCCAACTCCGATGATCATGAACTTCTCGGAATCGGAGAAATACACCCACTTGCCCATACCAACCGCATTGCCAGAGGCGGAGGCCTCACCGCTTCTAGGCAATACCACAAGGAAAATTAAGTTGAAGAAGCAAGAGCGTAACAACGTCTACATTAACCTTGGTCTTCTAACATTTCTTCTCATCATTTTTATAGCTTCTCTTCACGTACTTTGTAATTTATAATTATCATGTTCATTGTTACATTTACATTTATGGTTATGTTAACGTCACTCTCTCTTTTTTATTTATTTGTTTTCAAGCATTTATACATATTCTTCTAACTATGGTAGTTGACCCATCGGTATCGTATATTATTTATATATAAAAAAAAGACCCGATCTTTTATATCCCATTTTGATATTTTAGTCTTTAATTTTTTTAAAAAACTATTTTATCTCAATTTTTTTATGTGCCTATTTTAGTATAAATAATTGAAAATTAACTTTAATACTAACTTAGTATATTTAAATCAACCAATTAAATATTGTATTTATTAAAAAACAATATGATGAAAAGTAAAATAAATATTCTTAAATATATTTAGAGACAACAAAAATTATTATTATTATTCTTTTTTGTCCTAAGATTTAAAAATTTAAGACAATTGTTATTATAATTAGTGCCGGTGTGGTTACTTGCGCGCGTTAAAACGTGAAGCTGAAGCGCGTCCAAATTGGAAGCAGTATCTTCTTGTTTGTCGGCGACCTTCTGAAATCCTGTTTGCCATCTTCCAAAGCTTCGCCGCAGCCGGTTTACAGTTGAATTGAAGGGTTCGTGACTGTCTTCCGCTTCCTTAATTTTCAAGCGATCCACACTGTTCTCCAAAAGTGCGGAACCGCTTTCTGATTCGCCATCTTACGCCAAGTTTAGATTAAAGAAGCTACCACGAATTCCCCGCTTGATCTTCGACTTAGGGTTTTTCTCAATTCTCATAGCTGTCCATAGGTAAGTTCTTCTTTTCTTCATTTTCGATATCCTGAGTTCAATTTAAGCCAAATCGATCATTGTTTGAACCTCATCCAAGGTCAAATCGCTACGCCCAGGGTTTCTCTGTGAATCCTGATTTTCAGGCTTGTTTTATGTCTGTGCGAGGTCTTTTATGCGTTCATATAACTCAATGCGGTGTGATAGTTGATTCTTATCTTAATCATGTGCAGATATATCGACAGCCCTTTGTAA ATGAAGAAAAGCATAACGCGAAGCACAAGACGGCTTAACCGAGCCTTAAAGAAACGAATTCCAGTTAGAATTTGTGACAAACAAAACCAACACAAACTGGAATCCAAGGGGAAGGGGACAATGGGAGGAGTTTCAAGAGAGGCGGAGATGTCAATGGCAGCTCTGTCCATGTTCCCCGGCTTCAGATTTTCCCCCAAAGACGAAGAACTGATTTTATTTTACCTCAAGAAGAAGCTCCAAGGCTCCGACGACAGCGTCGATGTCATTTCCGAGATCGAGATTTGCAAATTCGAGCCATGGGACCTTCCCGGACGTGCTCCAACAGGGGAGAGAACAGAGTGGATTATGCACGAGTATTGCTTGAACGACACCTCCCAGGATTCTAATTCCATGGTGGTTTGTCGTCTCCGGAAGAACAACGATTTTCGCCGGAACAACTCCGACAAGGCGGGTTCGAGTAAAGTGCAGGGTTCCGGCGAGGATGGGGACGGCGGAGTTGGACAGAAGGTGGGGGGTGAAAGCGATAGGCTTTCGAAGAACTGCAGCAGTAGTTTCGATTCTCATTCGCTGGAGCAAACTGATTCGGGCATTGAATTCCGTCGCAAAGAAACGTCCGACCCGGCGCTGCACGAATCCCTCAGTCCTGAAAAGGGTAACGGTGAAGATGAAGAGTTGTATGCGGATTTGTTGAAAGACGACATAATTACATTGGACGATAATTTGCTATCTGCAACTCACAATCCAACTCCGATGATCATGAACTTCTCGGAATCGGAGAAATACACCCACTTGCCCATACCAACCGCATTGCCAGAGGCGGAGGCCTCACCGCTTCTAGGCAATACCACAAGGAAAATTAAGTTGAAGAAGCAAGAGCGTAACAACGTCTACATTAACCTTGGTCTTCTAACATTTCTTCTCATCATTTTTATAGCTTCTCTTCACCGATCCACACTGTTCTCCAAAAGTGCGGAACCGCTTTCTGATTCGCCATCTTACGCCAAGTTTAGATTAAAGAAGCTACCACGAATTCCCCGCTTGATCTTCGACTTAGGGTTTTTCTCAATTCTCATAGCTGTCCATAGATATATCGACAGCCCTTTGTAA ATGAAGAAAAGCATAACGCGAAGCACAAGACGGCTTAACCGAGCCTTAAAGAAACGAATTCCAGTTAGAATTTGTGACAAACAAAACCAACACAAACTGGAATCCAAGGGGAAGGGGACAATGGGAGGAGTTTCAAGAGAGGCGGAGATGTCAATGGCAGCTCTGTCCATGTTCCCCGGCTTCAGATTTTCCCCCAAAGACGAAGAACTGATTTTATTTTACCTCAAGAAGAAGCTCCAAGGCTCCGACGACAGCGTCGATGTCATTTCCGAGATCGAGATTTGCAAATTCGAGCCATGGGACCTTCCCGGACGTGCTCCAACAGGGGAGAGAACAGAGTGGATTATGCACGAGTATTGCTTGAACGACACCTCCCAGGATTCTAATTCCATGGTGGTTTGTCGTCTCCGGAAGAACAACGATTTTCGCCGGAACAACTCCGACAAGGCGGGTTCGAGTAAAGTGCAGGGTTCCGGCGAGGATGGGGACGGCGGAGTTGGACAGAAGGTGGGGGGTGAAAGCGATAGGCTTTCGAAGAACTGCAGCAGTAGTTTCGATTCTCATTCGCTGGAGCAAACTGATTCGGGCATTGAATTCCGTCGCAAAGAAACGTCCGACCCGGCGCTGCACGAATCCCTCAGTCCTGAAAAGGGTAACGGTGAAGATGAAGAGTTGTATGCGGATTTGTTGAAAGACGACATAATTACATTGGACGATAATTTGCTATCTGCAACTCACAATCCAACTCCGATGATCATGAACTTCTCGGAATCGGAGAAATACACCCACTTGCCCATACCAACCGCATTGCCAGAGGCGGAGGCCTCACCGCTTCTAGGCAATACCACAAGGAAAATTAAGTTGAAGAAGCAAGAGCGTAACAACGTCTACATTAACCTTGGTCTTCTAACATTTCTTCTCATCATTTTTATAGCTTCTCTTCACCGATCCACACTGTTCTCCAAAAGTGCGGAACCGCTTTCTGATTCGCCATCTTACGCCAAGTTTAGATTAAAGAAGCTACCACGAATTCCCCGCTTGATCTTCGACTTAGGGTTTTTCTCAATTCTCATAGCTGTCCATAGATATATCGACAGCCCTTTGTAA MKKSITRSTRRLNRALKKRIPVRICDKQNQHKLESKGKGTMGGVSREAEMSMAALSMFPGFRFSPKDEELILFYLKKKLQGSDDSVDVISEIEICKFEPWDLPGRAPTGERTEWIMHEYCLNDTSQDSNSMVVCRLRKNNDFRRNNSDKAGSSKVQGSGEDGDGGVGQKVGGESDRLSKNCSSSFDSHSLEQTDSGIEFRRKETSDPALHESLSPEKGNGEDEELYADLLKDDIITLDDNLLSATHNPTPMIMNFSESEKYTHLPIPTALPEAEASPLLGNTTRKIKLKKQERNNVYINLGLLTFLLIIFIASLHRSTLFSKSAEPLSDSPSYAKFRLKKLPRIPRLIFDLGFFSILIAVHRYIDSPL Homology
BLAST of Carg18419 vs. NCBI nr
Match: KAG7010339.1 (NAC domain-containing protein 40, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 716.1 bits (1847), Expect = 1.6e-202 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0
BLAST of Carg18419 vs. NCBI nr
Match: KAG6570472.1 (NAC domain-containing protein 40, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 611.7 bits (1576), Expect = 4.2e-171 Identity = 326/390 (83.59%), Postives = 327/390 (83.85%), Query Frame = 0
BLAST of Carg18419 vs. NCBI nr
Match: XP_022944560.1 (NAC domain-containing protein 40-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 510.8 bits (1314), Expect = 1.0e-140 Identity = 274/345 (79.42%), Postives = 277/345 (80.29%), Query Frame = 0
BLAST of Carg18419 vs. NCBI nr
Match: XP_022944561.1 (NAC domain-containing protein 40-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 498.4 bits (1282), Expect = 5.2e-137 Identity = 268/337 (79.53%), Postives = 270/337 (80.12%), Query Frame = 0
BLAST of Carg18419 vs. NCBI nr
Match: XP_023512161.1 (NAC domain-containing protein 40 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 495.7 bits (1275), Expect = 3.4e-136 Identity = 264/345 (76.52%), Postives = 273/345 (79.13%), Query Frame = 0
BLAST of Carg18419 vs. ExPASy Swiss-Prot
Match: Q94F58 (NAC domain-containing protein 89 OS=Arabidopsis thaliana OX=3702 GN=NAC089 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.7e-26 Identity = 94/313 (30.03%), Postives = 142/313 (45.37%), Query Frame = 0
BLAST of Carg18419 vs. ExPASy Swiss-Prot
Match: Q9XIN7 (NAC domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=NTL8 PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 6.2e-16 Identity = 83/264 (31.44%), Postives = 123/264 (46.59%), Query Frame = 0
BLAST of Carg18419 vs. ExPASy Swiss-Prot
Match: Q9LKG8 (NAC domain-containing protein 91 OS=Arabidopsis thaliana OX=3702 GN=NAC091 PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 7.5e-14 Identity = 54/163 (33.13%), Postives = 67/163 (41.10%), Query Frame = 0
BLAST of Carg18419 vs. ExPASy Swiss-Prot
Match: B5X570 (NAC domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=NAC014 PE=2 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 4.9e-13 Identity = 54/160 (33.75%), Postives = 64/160 (40.00%), Query Frame = 0
BLAST of Carg18419 vs. ExPASy Swiss-Prot
Match: Q9LXL9 (NAC domain-containing protein 60 OS=Arabidopsis thaliana OX=3702 GN=NAC60 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.4e-12 Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of Carg18419 vs. ExPASy TrEMBL
Match: A0A6J1FYR0 (NAC domain-containing protein 40-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448979 PE=4 SV=1) HSP 1 Score: 510.8 bits (1314), Expect = 4.9e-141 Identity = 274/345 (79.42%), Postives = 277/345 (80.29%), Query Frame = 0
BLAST of Carg18419 vs. ExPASy TrEMBL
Match: A0A6J1FUR4 (NAC domain-containing protein 40-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448979 PE=4 SV=1) HSP 1 Score: 498.4 bits (1282), Expect = 2.5e-137 Identity = 268/337 (79.53%), Postives = 270/337 (80.12%), Query Frame = 0
BLAST of Carg18419 vs. ExPASy TrEMBL
Match: A0A6J1JCJ3 (NAC domain-containing protein 40-like OS=Cucurbita maxima OX=3661 GN=LOC111483809 PE=4 SV=1) HSP 1 Score: 490.3 bits (1261), Expect = 6.8e-135 Identity = 266/344 (77.33%), Postives = 270/344 (78.49%), Query Frame = 0
BLAST of Carg18419 vs. ExPASy TrEMBL
Match: A0A5A7V382 (NAC domain-containing protein 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00990 PE=4 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 2.5e-105 Identity = 222/346 (64.16%), Postives = 241/346 (69.65%), Query Frame = 0
BLAST of Carg18419 vs. ExPASy TrEMBL
Match: A0A1S4DXM3 (NAC domain-containing protein 40 OS=Cucumis melo OX=3656 GN=LOC103491667 PE=4 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 2.5e-105 Identity = 222/346 (64.16%), Postives = 241/346 (69.65%), Query Frame = 0
BLAST of Carg18419 vs. TAIR 10
Match: AT5G22290.1 (NAC domain containing protein 89 ) HSP 1 Score: 121.7 bits (304), Expect = 1.2e-27 Identity = 94/313 (30.03%), Postives = 142/313 (45.37%), Query Frame = 0
BLAST of Carg18419 vs. TAIR 10
Match: AT2G27300.1 (NTM1-like 8 ) HSP 1 Score: 86.7 bits (213), Expect = 4.4e-17 Identity = 83/264 (31.44%), Postives = 123/264 (46.59%), Query Frame = 0
BLAST of Carg18419 vs. TAIR 10
Match: AT5G24590.2 (TCV-interacting protein ) HSP 1 Score: 79.7 bits (195), Expect = 5.3e-15 Identity = 54/163 (33.13%), Postives = 67/163 (41.10%), Query Frame = 0
BLAST of Carg18419 vs. TAIR 10
Match: AT1G33060.1 (NAC 014 ) HSP 1 Score: 77.0 bits (188), Expect = 3.5e-14 Identity = 54/160 (33.75%), Postives = 64/160 (40.00%), Query Frame = 0
BLAST of Carg18419 vs. TAIR 10
Match: AT1G33060.2 (NAC 014 ) HSP 1 Score: 77.0 bits (188), Expect = 3.5e-14 Identity = 54/160 (33.75%), Postives = 64/160 (40.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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