Carg18415 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18415
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor E2FB-like
Location	Carg_Chr20: 743144 .. 749504 (+)
RNA-Seq Expression	Carg18415
Synteny	Carg18415

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTCCTCTTCTATTCCTATCAATTTCCCCAATTGCACCTAAAACCCCAAACTCCCTCCATTTTTGCTCTCTTTCTCTGACCTTCGTACCCAAATCCGCAGCACACCAGGAGGTTACTCGATCTCTGCTCGCCCTTCTCTTTGAGGCTCTTCCATGTCGGGTTCTCGAGCTCCTAACTCCTCTGGACACCTTCCTGAGCAGATCATGCACTCTCTTAAGCGCCAGCTCCCCTTTTCTTCTATGAAACCGCCATTTGCATCTCCTGGGGACTATCACCGCTTCGCCCCGGACCCTCGACTCGCCGATCAAGAAGCTGACGCCATCGTAGTCAGATCTCCGGTGAGTTTGCTTCTGCTGTTTTTTTACACGCATATTTCGTTGATAACTTATCGTTCTCCTCACTGAGTAGTATTTTTGGACCCTTGTGTTTGTGATTCTAGTGTAAAATAGAAAATTATTTGGTTAGTAGGTTTTAAGCGGATCTCATGAATTGAATTAGCTGAGATTAGTGAAAATAGTTAGTTTCAGTGATTTGGTCATAATGAGATTGAGACTGTGCCCTTCGAATACTGCACCGAGAAGACCTTGAATTTTAGCTCAATTTCGGTTACTTTCTTTTTCCAGGGTGTTTTGTGTGACTGAATTAGATGAATTACGCTGTTATCACCTTTAATTCGTATCTTCCTGCTGTATCTAGAAAAGTGTATTGAGTATCTCAGTCTCCCTGCATTCTCAACCAGTGCATTTGTTGATTACTATAACTCGTTCTCTCTCAGAACTTCTTAATTTTCACTGAGCGAACTACTTTTCACTGCATTGTATTTGGTCCTTTTGGTCATTGGGTACGTTGATTAGTTTAAATGCAAGGGTAATAGATTGCTTTCGTCCTGAATCTAGATTGGTAGATGATGCACCGTTTGTCTCTATGAGCTTGAAGGATTTACTATTGTCAACCAATACTAGAGGCTGCCAAGATGGACGATACCCCCCACCTCTTCCTATATAGGCAAGCGACAAGTTTGTTGCCACAGTGTTAGAACCTTGATGCAAATAGATGATACTTGTGAGATTTATTTCATAATTATTTTTTAAAGAAAATATGCTAAATCTAGTAAAGGATGTGTTTCTTCAATAGCAAGTTCTCAATTATGATTATAGTACATCACCGATGCTGGATATGAACAAACAATACTGGAAGTAACTATCTCAAGGGATGACATCATAACGGTGTTAGATGACTTGATCAAGTCGTGCAGTACCATTGTGAGTTATATATTCAACCTCGGATATCATCTAAATAATTGTGGTTCAGTGGTAAAAAGGGCCAGCAAGAAATACATTCCATTTTCCTCGGTTGTAGGTGCCATCCAATTCTTTTAAGGGCTGCATCTACTGATCATCCTTGGTCATTAATTTTTGTATTCTTAGGCTACTATCATAAGTTTTATAATGATTATTCTGAAAACTTAATTGAACTGCTATTATGCATCGTTTGAATAACCTAGACTCTTGTACCCCTGATGGTGTAGTCTATCAAAAATATTTTCCATACTTGTTATCTTGATTTCATAATCAAGATTCTAGACACTTGTGGAATGCCAGTGATTTGCATCATTTATATGGTAGGATATTTCATACTACACTACAATAGAGGAAGGACGGGCGATGTCTTATTTACTTTTATTTTATTTGTTTATTTTTACTGAACTAGGTTTTTTTTCATTTGAGGTTTATTGTTTTTTTCTTTGAATGGTTCCATCTTTTAAAACATTGTTCTCAAATATACCCTTTATGTACTGATGGCAATCCAACTTTTATAAACGTTTGTCATTTACTTAAAAAATAGAAAACTAGATCAGTATTAACAGGTTTAATGATAATTATGGGATAGCATCTTTCAGTGTTCATTATTGTTGTAAATTGCGGTAGTTTTGATATTATGATATTTTGGGGTATTTATACAAATTTCTTATGTGGAAAGGTTGGTCAAGTGATGGCCATTGGAGGACTTTTGCATGCCTCAACCCTGATCCTTCTCATCTATATGTTTTGATTTAAAAAATCGGTACACTCAGCATAACCAAAATAATAATTCTTGAGCTCAGCGACAAATGATCCTCCCATACATTGTTAAAGATTTTATTTTTTGTTGAACATCCAGTCAGAGACAAGTCTAAGATCTTTTCTTCCCATGCTTTCTTAGCCATTTGAGGGTTTGAGAGGAGACATTCTCAAGGTTTAAATAGCGCTTGGTGGGTCTTTGGATTTCATTTGTTGAAAGCTTCCTTTTAGACTACACGAACTAAAACCTTCAGTAAATTTTTTGTTCTCTTGCTTTACATCAGTTTAAAATTGCTTTTATCAAAATCTTTGGATGTTTGAAAAAAGGCTTTCTTTTGCTTTGGTTGGAAGGATGTGCTGCAACCTACAAGCAAAGGAACCATTGGTTCTTGAAGCTTGCAACTAAACAAAGTTGTGCCGCTGCTTGATAAGACCTCACATGCTTTGGGTTCCATGGATGCAACAGATATTAATCTTCTTTCTAGATGACTTGCTTAGGATAGGAATTACTTTAGGGTTAATAGTATAACAATTTGCATCGGACAAGTGTTAATGGAGCAACTGAGAATTAGTTCTATCTGATTTATATTTCAGGACAAAGTTTTCTAGACTTATGGTTGGAATGGTAGATGTTGTACTATTGTTTATTTTTTGTCTCTATTTTCTTTATTATTAAAGCTCTCTGATATTAATCATTTTCTTGCATTAACTTTCCTTCTCAGTTTACGTACAATACTGTATATTGCATATTTTGCCATGCTTATTTGAAATCTTGAATCCTCTTTACCAGCAATTGAAGCGGAAGAGTGAGGTAGCAGATTATGAAGCTGACTCAACCGATAGAGCAGCTGGTCCTAGATTTTCTGAGGTAGCTAACAGTCCCCATCAAACACCTGTATCTGTGAAAGGAGGAAAGGGAAACAAATCAAGGCTTACTAAATGCAGTAGATCGGGGCCACAGACTCCCATGTCAAACGTTGGTAAGTTGTATATCATACATGTTGGTACCCTTGGTTTTAAGTTAAAATTGCCATATGTAAAATACCTTCTCAAAGAACTTCTTTTGCTAAAGAAATTGCATCATTGGTAAATTAGAGAAAGAAAAATCAATTTCTTCCACTCTTTCTTTCACAAAGTTATAATACATTAATGAAAAAAATGTTCCGAGTTTCAGGTTCACCTTCTGCCAACAATCTTACTCCAGCTGGTCCATGCCGTTATGATAGTTCTCTTGGTAGCTTGTTACTTCTGATGACTTTGTTGTAGCTGTCTTATATTTCCTACCAGCTCATGTTCCTAATTTTAGTGACTTTCATCTAGGTCTCTTAACAAAGAAGTTTATTAACCTGATCAAACAAGCGGAAGATGGTATTCTTGATCTCAATAAAGCAGCTGACACGTTGGAGGTTACTATGCTTCTAGAAGATTATAGGCTTCTATTGTGAAGTTCAATTAGTTGACATTTTTATGCCTTTATAGGTACAAAAAAGACGAATATATGATATAACAAATGTCCTCGAAGGAATTGGTCTCATAGAAAAGAAGCTTAAGAACAGAATTCAGTGGAAGTATGTACTATTACATACATTCTTTGGAGTTTCACGGTTTATTATTCATTAGTATTCCTTTCTTGTTATGCTACTTATTACTTGGGTAATTGATTGATTAGGGGGCTTGACGTCTCAAGGTCAGGGGATGTCGATGACAATTATGCTGGTCTACAGGTATGCAAAAAACAGGGCATTTTGACTATGTCCATTTTAGTTACTTACGATTGTTGCTGTTTAAGATTGCTGTTACTATTTGATCTCAATGCGAACAAACTTGTACTCTATTGAAACCAACAAAATTGTGTTTGTTGGGTGGAATGCTAGCCTGAAATCTGCAAGATATTGTATGTGAATAGGTACTCTATCGAAAAATATTCTATTATGTTCGTTTATGCCCTTTAGTTCACATTCTATCTCAATATTATTCTTGACGTTGGTAAGTTTCTCTTTGGTGAAATCTTTGTTTGCAAATGCTTGCACATTTTAATTTCAAGCTACCAGATTTAGCCTTAACCATAGTTACATGTGCAGGCAGAAGTAGAGAACCTTTCCATGGAGGAGCGTGGATTAGACGAACAAATAAGGTTGTTTAACTGAATCCTTTATTCAGTCTTTGAATGAAAATTTGTGTTCCCCTATTGTTATTCCAAGGCTTTTAATAATTGCAGAGAGATGCAGGAAAGATTAAGGGACCTCAGTGAAGACGAGAACAACCAAAGGCAATAGTTTTCACCTAGATTCACCTCTACATTGTTGTTTTTTCTTTTAAACGTAGAATTTAAAGCTTATTCTTTATTTAATTGTTAGGTGGCTTTTTGTAACCGAGGAAGACATCAAGGGTTTGCCCTGTTTCCAGGTTAGTTTATCATATATGGAGTTGATTGCAATAAATTTTGATTTACAAATATAGAAATGTCGTTCCATTTCTAATTATTGTGTCTATATTTTGCATCTACTAGAATGAAACTCTCATAGCCATTAAAGCTCCCCATGGAACCACTTTAGAAGTTCCAGATCCTGATGAGGTAATTTAATTGTAAAGGCTTGATGTAAAAGGTACCTATTCACATATTATATGTTCCAATCACTACTCCTATCATATGTCAGGCTGTTGACTACCCCCAAAGGAGGTACAGGATAGTCCTCAGAAGCACCATGGGACCCATTGATGTATACCTTGTTAGGTAACGTCTTATTTTTTTGGTTGTTGAGGAATGTTTGGCTTTGTACTGAAACACAACCACTATCTATGGCCATATTAATGAATAGGCTGGGAATTGGAACTGCCCAGTGTTCACAATATCCCCTTTTCCTACTATCAGTATCCTCCTTTTCCTACTACTCCTAAAACTGTGATATGAATTTCCATTTTGTAGTCAGTTTGAAGAAAAGTTTGAGGAGATAAATGGCGTGGAAGTGCCGCCAAGCTTGCCGTCAAGTTCAGGCTTTAATGAAGCACCTGCAACGACGATAGGAACAGAGGATACCAGGGGAAAGGAAATTGAAACGCGGGAACAAGATGTACACAGAATGTGCTCCGATCTAAATGCTTCACAGGACTTCGTGGGTGGAATTATGAAAATTGTTCCCTCCGTTGTAGATGTAAGTCTAATTTTTCAAAATTAAGGATTGGGGGAAGGACCAGGGGGACTAATACACCTTACTTAAAAACAAGAATTGGTTGATTGGGATACGGAGAAAATAAAGGCAGAAGCATCACGTTAGTTTCTAAGAAATGGTTGGTTTCATTTTGGAGGGCTTCATGCATGAGAGCATGAACATTGTTCTATCCGTTGGAGTGAGCCTAGATTCTAGAAGATGCAATCTGTATAAAAAAAAGGAATTAATAACACTTGCAACAAGTTAGTTTTTCCATAAAATTGTCGGAGGACAAAATAATGAAATGAAGCATTTCAGATGGGGAAGGGTAGTTTAGTTATGAAACCTTCGATGGTCAGAGAGCTGTATTTGTCAATAGTCACCCATTATTCATCCGAGGGGAAAATGTTTTGAGTTCATTATACAGTTTATGTAAATTAAGGATGTATTAGGACAGAATAAATGTTTGCAAGCATCTGATATCTTTGTTTCTTATTCAGAGTGATGCTGATTACTGGCTCTTGTCTGATGCTGATGTTAGTATCACTGACATGTGGAGAACTGAACGTATCCTCACAATTTAAATCTATCAGCCTTCATAGTAGTTTGAGTTTTCCCCTTTGTAATATCAAAGTGATACTGCATACACACCTTGACTCTTCATGTAGCTGGCGTTGAGTGGAATGATTTGGGTACATTTCATGAAGATTACAGTATTGCCAATGACAGCACCCCCGAAACCCAGAATCCACTTCCCAATAATGCACCTGATATGCCTTCTTCTGCTAATCCTTCTAGCAGCTGAAACTGTAAAGGGTATCTGTTTAGATAAATCTTGATGATAAATGCTACGGTCGTGCAAGAACTTGTATGATGGATGTATGATCCCTGTGATCCTTACTTAGAACCGGGAGGATTGGAACCGATTATCTCAGATTTGGACCAGCCTCCCTCCATGATAATTCCTGGAGAAGCATCTCTACCCAAAAAGCTAGAGGAAACTGCTGATGGGAAGGGCTCTGGTGTACAGTTTAGTGCCAAAAATATGTAGTAAATAAAATAGTCATTTCTGCATTGTACAATTCTTTGTTTCCAGATAAGAATAGCATGTGTAGTACATTCATTTTAAGCCAAGTTCAGTTCAAGTTCAA

mRNA sequence

CGTTCCTCTTCTATTCCTATCAATTTCCCCAATTGCACCTAAAACCCCAAACTCCCTCCATTTTTGCTCTCTTTCTCTGACCTTCGTACCCAAATCCGCAGCACACCAGGAGGTTACTCGATCTCTGCTCGCCCTTCTCTTTGAGGCTCTTCCATGTCGGGTTCTCGAGCTCCTAACTCCTCTGGACACCTTCCTGAGCAGATCATGCACTCTCTTAAGCGCCAGCTCCCCTTTTCTTCTATGAAACCGCCATTTGCATCTCCTGGGGACTATCACCGCTTCGCCCCGGACCCTCGACTCGCCGATCAAGAAGCTGACGCCATCGTAGTCAGATCTCCGTACATCACCGATGCTGGATATGAACAAACAATACTGGAAGTAACTATCTCAAGGGATGACATCATAACGGTGTTAGATGACTTGATCAAGTCGTGCAGTACCATTCAATTGAAGCGGAAGAGTGAGGTAGCAGATTATGAAGCTGACTCAACCGATAGAGCAGCTGGTCCTAGATTTTCTGAGGTAGCTAACAGTCCCCATCAAACACCTGTATCTGTGAAAGGAGGAAAGGGAAACAAATCAAGGCTTACTAAATGCAGTAGATCGGGGCCACAGACTCCCATGTCAAACGTTGGTTCACCTTCTGCCAACAATCTTACTCCAGCTGGTCCATGCCGTTATGATAGTTCTCTTGGTCTCTTAACAAAGAAGTTTATTAACCTGATCAAACAAGCGGAAGATGGTATTCTTGATCTCAATAAAGCAGCTGACACGTTGGAGGTACAAAAAAGACGAATATATGATATAACAAATGTCCTCGAAGGAATTGGTCTCATAGAAAAGAAGCTTAAGAACAGAATTCAGTGGAAGGGGCTTGACGTCTCAAGGTCAGGGGATGTCGATGACAATTATGCTGGTCTACAGGCAGAAGTAGAGAACCTTTCCATGGAGGAGCGTGGATTAGACGAACAAATAAGAGAGATGCAGGAAAGATTAAGGGACCTCAGTGAAGACGAGAACAACCAAAGGCAATAGTGGCTTTTTGTAACCGAGGAAGACATCAAGGGTTTGCCCTGTTTCCAGAATGAAACTCTCATAGCCATTAAAGCTCCCCATGGAACCACTTTAGAAGTTCCAGATCCTGATGAGGCTGTTGACTACCCCCAAAGGAGGTACAGGATAGTCCTCAGAAGCACCATGGGACCCATTGATGTATACCTTGTTAGTCAGTTTGAAGAAAAGTTTGAGGAGATAAATGGCGTGGAAGTGCCGCCAAGCTTGCCGTCAAGTTCAGGCTTTAATGAAGCACCTGCAACGACGATAGGAACAGAGGATACCAGGGGAAAGGAAATTGAAACGCGGGAACAAGATGTACACAGAATGTGCTCCGATCTAAATGCTTCACAGGACTTCGTGGGTGGAATTATGAAAATTGTTCCCTCCGTTGTAGATAGTGATGCTGATTACTGGCTCTTGTCTGATGCTGATGTTAGTATCACTGACATGTGGAGAACTGAACGTATCCTCACAATTTAAATCTATCAGCCTTCATAGTAGTTTGAGTTTTCCCCTTTGTAATATCAAAGTGATACTGCATACACACCTTGACTCTTCATGTAGCTGGCGTTGAGTGGAATGATTTGGGTACATTTCATGAAGATTACAGTATTGCCAATGACAGCACCCCCGAAACCCAGAATCCACTTCCCAATAATGCACCTGATATGCCTTCTTCTGCTAATCCTTCTAGCAGCTGAAACTGTAAAGGGTATCTGTTTAGATAAATCTTGATGATAAATGCTACGGTCGTGCAAGAACTTGTATGATGGATGTATGATCCCTGTGATCCTTACTTAGAACCGGGAGGATTGGAACCGATTATCTCAGTTCCTGGAGAAGCATCTCTACCCAAAAAGCTAGAGGAAACTGCTGATGGGAAGGGCTCTGGTGTACAGTTTAGTGCCAAAAATATGTAGTAAATAAAATAGTCATTTCTGCATTGTACAATTCTTTGTTTCCAGATAAGAATAGCATGTGTAGTACATTCATTTTAAGCCAAGTTCAGTTCAAGTTCAA

Coding sequence (CDS)

ATGTCGGGTTCTCGAGCTCCTAACTCCTCTGGACACCTTCCTGAGCAGATCATGCACTCTCTTAAGCGCCAGCTCCCCTTTTCTTCTATGAAACCGCCATTTGCATCTCCTGGGGACTATCACCGCTTCGCCCCGGACCCTCGACTCGCCGATCAAGAAGCTGACGCCATCGTAGTCAGATCTCCGTACATCACCGATGCTGGATATGAACAAACAATACTGGAAGTAACTATCTCAAGGGATGACATCATAACGGTGTTAGATGACTTGATCAAGTCGTGCAGTACCATTCAATTGAAGCGGAAGAGTGAGGTAGCAGATTATGAAGCTGACTCAACCGATAGAGCAGCTGGTCCTAGATTTTCTGAGGTAGCTAACAGTCCCCATCAAACACCTGTATCTGTGAAAGGAGGAAAGGGAAACAAATCAAGGCTTACTAAATGCAGTAGATCGGGGCCACAGACTCCCATGTCAAACGTTGGTTCACCTTCTGCCAACAATCTTACTCCAGCTGGTCCATGCCGTTATGATAGTTCTCTTGGTCTCTTAACAAAGAAGTTTATTAACCTGATCAAACAAGCGGAAGATGGTATTCTTGATCTCAATAAAGCAGCTGACACGTTGGAGGTACAAAAAAGACGAATATATGATATAACAAATGTCCTCGAAGGAATTGGTCTCATAGAAAAGAAGCTTAAGAACAGAATTCAGTGGAAGGGGCTTGACGTCTCAAGGTCAGGGGATGTCGATGACAATTATGCTGGTCTACAGGCAGAAGTAGAGAACCTTTCCATGGAGGAGCGTGGATTAGACGAACAAATAAGAGAGATGCAGGAAAGATTAAGGGACCTCAGTGAAGACGAGAACAACCAAAGGCAATAG

Protein sequence

MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVRSPYITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPRFSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQRQ

Homology

[Close]

BLAST of Carg18415 vs. NCBI nr
Match: KAG7010335.1 (Transcription factor E2FB [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 565.8 bits (1457), Expect = 2.1e-157
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR 60
           MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR
Sbjct: 1   MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR 60

Query: 61  SPYITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPR 120
           SPYITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPR
Sbjct: 61  SPYITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPR 120

Query: 121 FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 180
           FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL
Sbjct: 121 FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 180

Query: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240
           GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG
Sbjct: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240

Query: 241 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQRQ 294
           LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQRQ
Sbjct: 241 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQRQ 293

[Close]

BLAST of Carg18415 vs. NCBI nr
Match: XP_022944699.1 (transcription factor E2FB-like [Cucurbita moschata] >KAG6570470.1 Transcription factor E2FB, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 482.3 bits (1240), Expect = 3.1e-132
Identity = 257/292 (88.01%), Postives = 257/292 (88.01%), Query Frame = 0


Query: 1   MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR 60
           MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR
Sbjct: 1   MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR 60

Query: 61  SPYITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPR 120
           SP                                   QLKRKSEVADYEADSTDRAAGPR
Sbjct: 61  SP-----------------------------------QLKRKSEVADYEADSTDRAAGPR 120

Query: 121 FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 180
           FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL
Sbjct: 121 FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 180

Query: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240
           GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG
Sbjct: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240

Query: 241 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
           LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR
Sbjct: 241 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 257

[Close]

BLAST of Carg18415 vs. NCBI nr
Match: XP_023511801.1 (transcription factor E2FB-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 482.3 bits (1240), Expect = 3.1e-132
Identity = 257/292 (88.01%), Postives = 257/292 (88.01%), Query Frame = 0


Query: 1   MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR 60
           MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR
Sbjct: 1   MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR 60

Query: 61  SPYITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPR 120
           SP                                   QLKRKSEVADYEADSTDRAAGPR
Sbjct: 61  SP-----------------------------------QLKRKSEVADYEADSTDRAAGPR 120

Query: 121 FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 180
           FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL
Sbjct: 121 FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 180

Query: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240
           GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG
Sbjct: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240

Query: 241 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
           LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR
Sbjct: 241 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 257

[Close]

BLAST of Carg18415 vs. NCBI nr
Match: XP_022986222.1 (transcription factor E2FB-like [Cucurbita maxima])

HSP 1 Score: 479.9 bits (1234), Expect = 1.5e-131
Identity = 255/292 (87.33%), Postives = 257/292 (88.01%), Query Frame = 0


Query: 1   MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR 60
           MSGSRAPNSSGHLPEQIMHSLKRQLPFSS+KPPFASPGDYHRFAPDPRLADQEADAIVVR
Sbjct: 1   MSGSRAPNSSGHLPEQIMHSLKRQLPFSSLKPPFASPGDYHRFAPDPRLADQEADAIVVR 60

Query: 61  SPYITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPR 120
           SP                                   QLKRKSEVADYEADSTDRAAGPR
Sbjct: 61  SP-----------------------------------QLKRKSEVADYEADSTDRAAGPR 120

Query: 121 FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 180
           F+EVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL
Sbjct: 121 FTEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 180

Query: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240
           GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG
Sbjct: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240

Query: 241 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
           LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR
Sbjct: 241 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 257

[Close]

BLAST of Carg18415 vs. NCBI nr
Match: XP_008449589.1 (PREDICTED: transcription factor E2FB isoform X2 [Cucumis melo])

HSP 1 Score: 458.8 bits (1179), Expect = 3.6e-125
Identity = 243/292 (83.22%), Postives = 251/292 (85.96%), Query Frame = 0


Query: 1   MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR 60
           MSGSR PNSSGHLP+QIMHSLKRQLPFSS+KPPFASPGDYHRFAPD RLADQE+DAIVV+
Sbjct: 1   MSGSRPPNSSGHLPDQIMHSLKRQLPFSSVKPPFASPGDYHRFAPDSRLADQESDAIVVK 60

Query: 61  SPYITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPR 120
           SP                                   QLKRKSEVADYEA+STDRA GPR
Sbjct: 61  SP-----------------------------------QLKRKSEVADYEAESTDRAIGPR 120

Query: 121 FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 180
           F+EV NSPHQTPVSVKGGKG+KSRLTKCSRSGPQTPMSNVGSPS NNLTPAGPCRYDSSL
Sbjct: 121 FAEVVNSPHQTPVSVKGGKGSKSRLTKCSRSGPQTPMSNVGSPSTNNLTPAGPCRYDSSL 180

Query: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240
           GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG
Sbjct: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240

Query: 241 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
           LDVSRSGDVDDNYA LQAEVENL+MEERGLDEQIREMQERLRDLSEDENNQR
Sbjct: 241 LDVSRSGDVDDNYADLQAEVENLTMEERGLDEQIREMQERLRDLSEDENNQR 257

[Close]

BLAST of Carg18415 vs. ExPASy Swiss-Prot
Match: Q9FV71 (Transcription factor E2FB OS=Arabidopsis thaliana OX=3702 GN=E2FB PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.5e-60
Identity = 157/292 (53.77%), Postives = 183/292 (62.67%), Query Frame = 0


Query: 10  SGHLPEQIMHSLKRQL--PFSSMKPPFASPGDYHRF-APDPR----LADQ-EADAIVVRS 69
           S  +P+Q   S KRQL    SSMKPP  +PG+YHRF A + R    +ADQ  +DAIV++S
Sbjct: 2   SEEVPQQFPSS-KRQLHPSLSSMKPPLVAPGEYHRFDAAETRGGGAVADQVVSDAIVIKS 61

Query: 70  PYITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPRF 129
                                                LKRK+++ +   +          
Sbjct: 62  ------------------------------------TLKRKTDLVNQIVE---------V 121

Query: 130 SEVANSPHQTPVSVKGGKGNK-SRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 189
           +E+     QTPVS KGGK  K SR  K ++SG     SN GSP  NN   AG CRYDSSL
Sbjct: 122 NELNTGVLQTPVSGKGGKAKKTSRSAKSNKSGTLASGSNAGSP-GNNFAQAGTCRYDSSL 181

Query: 190 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 249
           GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEK LKNRIQWKG
Sbjct: 182 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKTLKNRIQWKG 241

Query: 250 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
           LDVS+ G+  ++ A LQ EV+NL+ EE  LD+QIRE QERL  LSEDENN+R
Sbjct: 242 LDVSKPGETIESIANLQDEVQNLAAEEARLDDQIRESQERLTSLSEDENNKR 246

[Close]

BLAST of Carg18415 vs. ExPASy Swiss-Prot
Match: Q9FNY0 (Transcription factor E2FA OS=Arabidopsis thaliana OX=3702 GN=E2FA PE=1 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.4e-55
Identity = 140/291 (48.11%), Postives = 173/291 (59.45%), Query Frame = 0


Query: 17  IMHSLKRQLPFSSMKPPFASPGDYHRFAPDP-------------RLADQEADAIVVRSPY 76
           ++  ++R L F+S KPPF    DYHRF P                + D+E DA+VVRSP 
Sbjct: 34  VIPPIRRHLAFASTKPPFHPSDDYHRFNPSSLSNNNDRSFVHGCGVVDREEDAVVVRSP- 93

Query: 77  ITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPRFSE 136
                                               KRK+ +    A S +      F+ 
Sbjct: 94  ----------------------------------SRKRKATMDMVVAPSNNGFTSSGFTN 153

Query: 137 VANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMS-NVGSPSANNLTPAGPCRYDSSLGL 196
           + +SP QTP   KGG+ N     K ++S PQTP+S N GSP    LTP+G CRYDSSLGL
Sbjct: 154 IPSSPCQTP--RKGGRVNIKSKAKGNKSTPQTPISTNAGSPI--TLTPSGSCRYDSSLGL 213

Query: 197 LTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLD 256
           LTKKF+NLIKQA+DG+LDLNKAA+TLEVQKRRIYDITNVLEGI LIEK  KNRI WKG+D
Sbjct: 214 LTKKFVNLIKQAKDGMLDLNKAAETLEVQKRRIYDITNVLEGIDLIEKPFKNRILWKGVD 273

Query: 257 VSRSG-DVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
                 D D +   LQAE+ENL++EE+ LD QIR+ +ERLRDLSE+E NQ+
Sbjct: 274 ACPGDEDADVSVLQLQAEIENLALEEQALDNQIRQTEERLRDLSENEKNQK 285

[Close]

BLAST of Carg18415 vs. ExPASy Swiss-Prot
Match: Q9FV70 (Transcription factor E2FC OS=Arabidopsis thaliana OX=3702 GN=E2FC PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.4e-31
Identity = 85/171 (49.71%), Postives = 107/171 (62.57%), Query Frame = 0


Query: 122 SEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSLG 181
           ++V      +P +VK         TK  ++G +     V +   N  +    CRYDSSLG
Sbjct: 104 AKVIVKQESSPQNVKRVYNKSKGGTKLLKAGKRMANGEVQNGGLNGASI--NCRYDSSLG 163

Query: 182 LLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGL 241
           LLTKKF+ LI++AEDG LDLN  A  LEVQKRRIYDITNVLEGIGLIEK  KN I+WKG 
Sbjct: 164 LLTKKFVKLIQEAEDGTLDLNYCAVVLEVQKRRIYDITNVLEGIGLIEKTTKNHIRWKGA 223

Query: 242 DVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
           D     D+ D  + L++EVE++  EE  LD+ IRE QE LR L ED+  +R
Sbjct: 224 DNLGQKDLGDQISRLKSEVESMQSEESRLDDLIRERQEALRSLEEDDYCRR 272

[Close]

BLAST of Carg18415 vs. ExPASy Swiss-Prot
Match: O00716 (Transcription factor E2F3 OS=Homo sapiens OX=9606 GN=E2F3 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.6e-30
Identity = 86/171 (50.29%), Postives = 104/171 (60.82%), Query Frame = 0


Query: 123 EVANSPHQ-TPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSLG 182
           E+  S HQ     +K  KG K R    S   P+TP S           P+   RYD+SLG
Sbjct: 137 ELGESGHQYLSDGLKTPKG-KGRAALRSPDSPKTPKS-----------PSEKTRYDTSLG 196

Query: 183 LLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGL 242
           LLTKKFI L+ Q+ DG+LDLNKAA+ L+VQKRRIYDITNVLEGI LI+KK KN +QW G 
Sbjct: 197 LLTKKFIQLLSQSPDGVLDLNKAAEVLKVQKRRIYDITNVLEGIHLIKKKSKNNVQWMGC 256

Query: 243 DVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
            +S  G +     GL  EV  LS EE+ LDE I+     L+ L+ED  NQR
Sbjct: 257 SLSEDGGMLAQCQGLSKEVTELSQEEKKLDELIQSCTLDLKLLTEDSENQR 295

[Close]

BLAST of Carg18415 vs. ExPASy Swiss-Prot
Match: O35261 (Transcription factor E2F3 OS=Mus musculus OX=10090 GN=E2f3 PE=1 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 4.6e-30
Identity = 86/171 (50.29%), Postives = 104/171 (60.82%), Query Frame = 0


Query: 123 EVANSPHQ-TPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSLG 182
           E+  S HQ     +K  KG K R    S   P+TP S           P+   RYD+SLG
Sbjct: 129 ELGESGHQYLSDGLKTPKG-KGRAALRSPDSPKTPKS-----------PSEKTRYDTSLG 188

Query: 183 LLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGL 242
           LLTKKFI L+ Q+ DG+LDLNKAA+ L+VQKRRIYDITNVLEGI LI+KK KN +QW G 
Sbjct: 189 LLTKKFIQLLSQSPDGVLDLNKAAEVLKVQKRRIYDITNVLEGIHLIKKKSKNNVQWMGC 248

Query: 243 DVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
            +S  G +     GL  EV  LS EE+ LDE I+     L+ L+ED  NQR
Sbjct: 249 SLSEDGGMLAQCQGLSKEVTELSQEEKKLDELIQSCTLDLKLLTEDSENQR 287

[Close]

BLAST of Carg18415 vs. ExPASy TrEMBL
Match: A0A6J1FX60 (transcription factor E2FB-like OS=Cucurbita moschata OX=3662 GN=LOC111449082 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.5e-132
Identity = 257/292 (88.01%), Postives = 257/292 (88.01%), Query Frame = 0


Query: 1   MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR 60
           MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR
Sbjct: 1   MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR 60

Query: 61  SPYITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPR 120
           SP                                   QLKRKSEVADYEADSTDRAAGPR
Sbjct: 61  SP-----------------------------------QLKRKSEVADYEADSTDRAAGPR 120

Query: 121 FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 180
           FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL
Sbjct: 121 FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 180

Query: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240
           GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG
Sbjct: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240

Query: 241 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
           LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR
Sbjct: 241 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 257

[Close]

BLAST of Carg18415 vs. ExPASy TrEMBL
Match: A0A6J1J6Z4 (transcription factor E2FB-like OS=Cucurbita maxima OX=3661 GN=LOC111484041 PE=3 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 7.3e-132
Identity = 255/292 (87.33%), Postives = 257/292 (88.01%), Query Frame = 0


Query: 1   MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR 60
           MSGSRAPNSSGHLPEQIMHSLKRQLPFSS+KPPFASPGDYHRFAPDPRLADQEADAIVVR
Sbjct: 1   MSGSRAPNSSGHLPEQIMHSLKRQLPFSSLKPPFASPGDYHRFAPDPRLADQEADAIVVR 60

Query: 61  SPYITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPR 120
           SP                                   QLKRKSEVADYEADSTDRAAGPR
Sbjct: 61  SP-----------------------------------QLKRKSEVADYEADSTDRAAGPR 120

Query: 121 FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 180
           F+EVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL
Sbjct: 121 FTEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 180

Query: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240
           GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG
Sbjct: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240

Query: 241 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
           LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR
Sbjct: 241 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 257

[Close]

BLAST of Carg18415 vs. ExPASy TrEMBL
Match: A0A1S3BLR6 (transcription factor E2FB isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491428 PE=3 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.8e-125
Identity = 243/292 (83.22%), Postives = 251/292 (85.96%), Query Frame = 0


Query: 1   MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR 60
           MSGSR PNSSGHLP+QIMHSLKRQLPFSS+KPPFASPGDYHRFAPD RLADQE+DAIVV+
Sbjct: 1   MSGSRPPNSSGHLPDQIMHSLKRQLPFSSVKPPFASPGDYHRFAPDSRLADQESDAIVVK 60

Query: 61  SPYITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPR 120
           SP                                   QLKRKSEVADYEA+STDRA GPR
Sbjct: 61  SP-----------------------------------QLKRKSEVADYEAESTDRAIGPR 120

Query: 121 FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 180
           F+EV NSPHQTPVSVKGGKG+KSRLTKCSRSGPQTPMSNVGSPS NNLTPAGPCRYDSSL
Sbjct: 121 FAEVVNSPHQTPVSVKGGKGSKSRLTKCSRSGPQTPMSNVGSPSTNNLTPAGPCRYDSSL 180

Query: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240
           GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG
Sbjct: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240

Query: 241 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
           LDVSRSGDVDDNYA LQAEVENL+MEERGLDEQIREMQERLRDLSEDENNQR
Sbjct: 241 LDVSRSGDVDDNYADLQAEVENLTMEERGLDEQIREMQERLRDLSEDENNQR 257

[Close]

BLAST of Carg18415 vs. ExPASy TrEMBL
Match: A0A1S3BNB0 (transcription factor E2FB isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491428 PE=3 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 5.6e-124
Identity = 243/294 (82.65%), Postives = 251/294 (85.37%), Query Frame = 0


Query: 1   MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR 60
           MSGSR PNSSGHLP+QIMHSLKRQLPFSS+KPPFASPGDYHRFAPD RLADQE+DAIVV+
Sbjct: 1   MSGSRPPNSSGHLPDQIMHSLKRQLPFSSVKPPFASPGDYHRFAPDSRLADQESDAIVVK 60

Query: 61  SPYITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPR 120
           SP                                   QLKRKSEVADYEA+STDRA GPR
Sbjct: 61  SP-----------------------------------QLKRKSEVADYEAESTDRAIGPR 120

Query: 121 FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNV--GSPSANNLTPAGPCRYDS 180
           F+EV NSPHQTPVSVKGGKG+KSRLTKCSRSGPQTPMSNV  GSPS NNLTPAGPCRYDS
Sbjct: 121 FAEVVNSPHQTPVSVKGGKGSKSRLTKCSRSGPQTPMSNVVSGSPSTNNLTPAGPCRYDS 180

Query: 181 SLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQW 240
           SLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQW
Sbjct: 181 SLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQW 240

Query: 241 KGLDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
           KGLDVSRSGDVDDNYA LQAEVENL+MEERGLDEQIREMQERLRDLSEDENNQR
Sbjct: 241 KGLDVSRSGDVDDNYADLQAEVENLTMEERGLDEQIREMQERLRDLSEDENNQR 259

[Close]

BLAST of Carg18415 vs. ExPASy TrEMBL
Match: A0A6J1DJ95 (transcription factor E2FB-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111020568 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.4e-122
Identity = 240/292 (82.19%), Postives = 248/292 (84.93%), Query Frame = 0


Query: 1   MSGSRAPNSSGHLPEQIMHSLKRQLPFSSMKPPFASPGDYHRFAPDPRLADQEADAIVVR 60
           MSGSRAPNSSG   +QIMHSLKR LPFSSMKPPFASPGDYHRFA +PRL+D E DAIVV+
Sbjct: 1   MSGSRAPNSSGLPSDQIMHSLKRHLPFSSMKPPFASPGDYHRFASEPRLSDHEPDAIVVK 60

Query: 61  SPYITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPR 120
           SP                                   QLKRKSEVADYEA+STDRAAGPR
Sbjct: 61  SP-----------------------------------QLKRKSEVADYEAESTDRAAGPR 120

Query: 121 FSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 180
           F+EV +SPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL
Sbjct: 121 FTEVVSSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 180

Query: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240
           GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG
Sbjct: 181 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 240

Query: 241 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
           LDVSR GDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSED+NNQR
Sbjct: 241 LDVSRPGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDDNNQR 257

[Close]

BLAST of Carg18415 vs. TAIR 10
Match: AT5G22220.2 (E2F transcription factor 1 )

HSP 1 Score: 234.6 bits (597), Expect = 1.0e-61
Identity = 157/292 (53.77%), Postives = 183/292 (62.67%), Query Frame = 0


Query: 10  SGHLPEQIMHSLKRQL--PFSSMKPPFASPGDYHRF-APDPR----LADQ-EADAIVVRS 69
           S  +P+Q   S KRQL    SSMKPP  +PG+YHRF A + R    +ADQ  +DAIV++S
Sbjct: 2   SEEVPQQFPSS-KRQLHPSLSSMKPPLVAPGEYHRFDAAETRGGGAVADQVVSDAIVIKS 61

Query: 70  PYITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPRF 129
                                                LKRK+++ +   +          
Sbjct: 62  ------------------------------------TLKRKTDLVNQIVE---------V 121

Query: 130 SEVANSPHQTPVSVKGGKGNK-SRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 189
           +E+     QTPVS KGGK  K SR  K ++SG     SN GSP  NN   AG CRYDSSL
Sbjct: 122 NELNTGVLQTPVSGKGGKAKKTSRSAKSNKSGTLASGSNAGSP-GNNFAQAGTCRYDSSL 181

Query: 190 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 249
           GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEK LKNRIQWKG
Sbjct: 182 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKTLKNRIQWKG 241

Query: 250 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
           LDVS+ G+  ++ A LQ EV+NL+ EE  LD+QIRE QERL  LSEDENN+R
Sbjct: 242 LDVSKPGETIESIANLQDEVQNLAAEEARLDDQIRESQERLTSLSEDENNKR 246

[Close]

BLAST of Carg18415 vs. TAIR 10
Match: AT5G22220.3 (E2F transcription factor 1 )

HSP 1 Score: 234.6 bits (597), Expect = 1.0e-61
Identity = 157/292 (53.77%), Postives = 183/292 (62.67%), Query Frame = 0


Query: 10  SGHLPEQIMHSLKRQL--PFSSMKPPFASPGDYHRF-APDPR----LADQ-EADAIVVRS 69
           S  +P+Q   S KRQL    SSMKPP  +PG+YHRF A + R    +ADQ  +DAIV++S
Sbjct: 2   SEEVPQQFPSS-KRQLHPSLSSMKPPLVAPGEYHRFDAAETRGGGAVADQVVSDAIVIKS 61

Query: 70  PYITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPRF 129
                                                LKRK+++ +   +          
Sbjct: 62  ------------------------------------TLKRKTDLVNQIVE---------V 121

Query: 130 SEVANSPHQTPVSVKGGKGNK-SRLTKCSRSGPQTPMSNVGSPSANNLTPAGPCRYDSSL 189
           +E+     QTPVS KGGK  K SR  K ++SG     SN GSP  NN   AG CRYDSSL
Sbjct: 122 NELNTGVLQTPVSGKGGKAKKTSRSAKSNKSGTLASGSNAGSP-GNNFAQAGTCRYDSSL 181

Query: 190 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKG 249
           GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEK LKNRIQWKG
Sbjct: 182 GLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKTLKNRIQWKG 241

Query: 250 LDVSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
           LDVS+ G+  ++ A LQ EV+NL+ EE  LD+QIRE QERL  LSEDENN+R
Sbjct: 242 LDVSKPGETIESIANLQDEVQNLAAEEARLDDQIRESQERLTSLSEDENNKR 246

[Close]

BLAST of Carg18415 vs. TAIR 10
Match: AT2G36010.1 (E2F transcription factor 3 )

HSP 1 Score: 221.1 bits (562), Expect = 1.2e-57
Identity = 141/290 (48.62%), Postives = 175/290 (60.34%), Query Frame = 0


Query: 17  IMHSLKRQLPFSSMKPPFASPGDYHRFAPDP-------------RLADQEADAIVVRSPY 76
           ++  ++R L F+S KPPF    DYHRF P                + D+E DA+VVRSP 
Sbjct: 34  VIPPIRRHLAFASTKPPFHPSDDYHRFNPSSLSNNNDRSFVHGCGVVDREEDAVVVRSP- 93

Query: 77  ITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPRFSE 136
                                               KRK+ +    A S +      F+ 
Sbjct: 94  ----------------------------------SRKRKATMDMVVAPSNNGFTSSGFTN 153

Query: 137 VANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMS-NVGSPSANNLTPAGPCRYDSSLGL 196
           + +SP QTP   KGG+ N     K ++S PQTP+S N GSP    LTP+G CRYDSSLGL
Sbjct: 154 IPSSPCQTP--RKGGRVNIKSKAKGNKSTPQTPISTNAGSPI--TLTPSGSCRYDSSLGL 213

Query: 197 LTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLD 256
           LTKKF+NLIKQA+DG+LDLNKAA+TLEVQKRRIYDITNVLEGI LIEK  KNRI WKG+D
Sbjct: 214 LTKKFVNLIKQAKDGMLDLNKAAETLEVQKRRIYDITNVLEGIDLIEKPFKNRILWKGVD 273

Query: 257 VSRSGDVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
               GD D + + LQAE+ENL++EE+ LD QIR+ +ERLRDLSE+E NQ+
Sbjct: 274 AC-PGDEDADVSVLQAEIENLALEEQALDNQIRQTEERLRDLSENEKNQK 283

[Close]

BLAST of Carg18415 vs. TAIR 10
Match: AT2G36010.3 (E2F transcription factor 3 )

HSP 1 Score: 218.0 bits (554), Expect = 1.0e-56
Identity = 140/291 (48.11%), Postives = 173/291 (59.45%), Query Frame = 0


Query: 17  IMHSLKRQLPFSSMKPPFASPGDYHRFAPDP-------------RLADQEADAIVVRSPY 76
           ++  ++R L F+S KPPF    DYHRF P                + D+E DA+VVRSP 
Sbjct: 34  VIPPIRRHLAFASTKPPFHPSDDYHRFNPSSLSNNNDRSFVHGCGVVDREEDAVVVRSP- 93

Query: 77  ITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQLKRKSEVADYEADSTDRAAGPRFSE 136
                                               KRK+ +    A S +      F+ 
Sbjct: 94  ----------------------------------SRKRKATMDMVVAPSNNGFTSSGFTN 153

Query: 137 VANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMS-NVGSPSANNLTPAGPCRYDSSLGL 196
           + +SP QTP   KGG+ N     K ++S PQTP+S N GSP    LTP+G CRYDSSLGL
Sbjct: 154 IPSSPCQTP--RKGGRVNIKSKAKGNKSTPQTPISTNAGSPI--TLTPSGSCRYDSSLGL 213

Query: 197 LTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLD 256
           LTKKF+NLIKQA+DG+LDLNKAA+TLEVQKRRIYDITNVLEGI LIEK  KNRI WKG+D
Sbjct: 214 LTKKFVNLIKQAKDGMLDLNKAAETLEVQKRRIYDITNVLEGIDLIEKPFKNRILWKGVD 273

Query: 257 VSRSG-DVDDNYAGLQAEVENLSMEERGLDEQIREMQERLRDLSEDENNQR 293
                 D D +   LQAE+ENL++EE+ LD QIR+ +ERLRDLSE+E NQ+
Sbjct: 274 ACPGDEDADVSVLQLQAEIENLALEEQALDNQIRQTEERLRDLSENEKNQK 285

[Close]

BLAST of Carg18415 vs. TAIR 10
Match: AT2G36010.2 (E2F transcription factor 3 )

HSP 1 Score: 171.0 bits (432), Expect = 1.4e-42
Identity = 121/291 (41.58%), Postives = 160/291 (54.98%), Query Frame = 0


Query: 17  IMHSLKRQLPFSSMKPPFASPGDYHRFAPDP-------------RLADQEADAIVVRSP- 76
           ++  ++R L F+S KPPF    DYHRF P                + D+E DA+VVRSP 
Sbjct: 34  VIPPIRRHLAFASTKPPFHPSDDYHRFNPSSLSNNNDRSFVHGCGVVDREEDAVVVRSPI 93

Query: 77  YITDAGYEQTILEVTISRDDIITVLDDLIKSCSTIQL-----------------KRKSEV 136
           + ++ G E   +       D   +L  LI+   +++L                 KRK+ +
Sbjct: 94  FPSEIGLE---IRGCFGDFDCYLLLLSLIQKLRSVRLSSIRVNFCRLFSFAMSRKRKATM 153

Query: 137 ADYEADSTDRAAGPRFSEVANSPHQTPVSVKGGKGNKSRLTKCSRSGPQTPMSNVGSPSA 196
               A S +      F+ + +SP QTP   KGG+ N     K ++S PQTP+S     S 
Sbjct: 154 DMVVAPSNNGFTSSGFTNIPSSPCQTP--RKGGRVNIKSKAKGNKSTPQTPISTNAVRSF 213

Query: 197 NNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGI 256
             ++            LLTKKF+NLIKQA+DG+LDLNKAA+TLEVQKRRIYDITNVLEGI
Sbjct: 214 YEIS-----FMSRVTSLLTKKFVNLIKQAKDGMLDLNKAAETLEVQKRRIYDITNVLEGI 273

Query: 257 GLIEKKLKNRIQWKGLDVSRSG-DVDDNYAGLQAEVENLSMEERGLDEQIR 276
            LIEK  KNRI WKG+D      D D +   LQAE+ENL++EE+ LD QIR
Sbjct: 274 DLIEKPFKNRILWKGVDACPGDEDADVSVLQLQAEIENLALEEQALDNQIR 314

The following BLAST results are available for this feature:

BLAST of Carg18415 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010335.1	2.1e-157	100.00	Transcription factor E2FB [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022944699.1	3.1e-132	88.01	transcription factor E2FB-like [Cucurbita moschata] >KAG6570470.1 Transcription ...	[more]
XP_023511801.1	3.1e-132	88.01	transcription factor E2FB-like [Cucurbita pepo subsp. pepo]	[more]
XP_022986222.1	1.5e-131	87.33	transcription factor E2FB-like [Cucurbita maxima]	[more]
XP_008449589.1	3.6e-125	83.22	PREDICTED: transcription factor E2FB isoform X2 [Cucumis melo]	[more]

BLAST of Carg18415 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FV71	1.5e-60	53.77	Transcription factor E2FB OS=Arabidopsis thaliana OX=3702 GN=E2FB PE=1 SV=1	[more]
Q9FNY0	1.4e-55	48.11	Transcription factor E2FA OS=Arabidopsis thaliana OX=3702 GN=E2FA PE=1 SV=1	[more]
Q9FV70	2.4e-31	49.71	Transcription factor E2FC OS=Arabidopsis thaliana OX=3702 GN=E2FC PE=1 SV=1	[more]
O00716	4.6e-30	50.29	Transcription factor E2F3 OS=Homo sapiens OX=9606 GN=E2F3 PE=1 SV=1	[more]
O35261	4.6e-30	50.29	Transcription factor E2F3 OS=Mus musculus OX=10090 GN=E2f3 PE=1 SV=2	[more]

BLAST of Carg18415 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FX60	1.5e-132	88.01	transcription factor E2FB-like OS=Cucurbita moschata OX=3662 GN=LOC111449082 PE=...	[more]
A0A6J1J6Z4	7.3e-132	87.33	transcription factor E2FB-like OS=Cucurbita maxima OX=3661 GN=LOC111484041 PE=3 ...	[more]
A0A1S3BLR6	1.8e-125	83.22	transcription factor E2FB isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491428 PE=...	[more]
A0A1S3BNB0	5.6e-124	82.65	transcription factor E2FB isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491428 PE=...	[more]
A0A6J1DJ95	1.4e-122	82.19	transcription factor E2FB-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of Carg18415 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22220.2	1.0e-61	53.77	E2F transcription factor 1	[more]
AT5G22220.3	1.0e-61	53.77	E2F transcription factor 1	[more]
AT2G36010.1	1.2e-57	48.62	E2F transcription factor 3	[more]
AT2G36010.3	1.0e-56	48.11	E2F transcription factor 3	[more]
AT2G36010.2	1.4e-42	41.58	E2F transcription factor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 191..211
None	No IPR available	COILS	Coil	Coil	coord: 253..293
None	No IPR available	GENE3D	6.10.250.540		coord: 247..293 e-value: 9.2E-8 score: 33.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..170
None	No IPR available	PANTHER	PTHR12081:SF83	TRANSCRIPTION FACTOR E2FB	coord: 18..292
IPR003316	E2F/DP family, winged-helix DNA-binding domain	SMART	SM01372	E2F_TDP_2	coord: 175..240 e-value: 8.0E-35 score: 131.7
IPR003316	E2F/DP family, winged-helix DNA-binding domain	PFAM	PF02319	E2F_TDP	coord: 177..240 e-value: 5.9E-26 score: 90.3
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 169..242 e-value: 1.2E-29 score: 103.7
IPR015633	E2F Family	PANTHER	PTHR12081	TRANSCRIPTION FACTOR E2F	coord: 18..292
IPR037241	E2F-DP heterodimerization region	SUPERFAMILY	144074	E2F-DP heterodimerization region	coord: 252..292
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 175..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18415-RA	Carg18415-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription regulator complex
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding