Carg18383 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18383
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	sister chromatid cohesion 1 protein 1
Location	Carg_Chr04: 703114 .. 707314 (+)
RNA-Seq Expression	Carg18383
Synteny	Carg18383

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGACTATGTTTTACTCGCATCAGCTACTGGCTCGCAAGGCTCCACTCGGCCAAATCTGGTAAGCGGATTGGAGTACGTTTCTGGATCTAAATATGTTCGAATCTACGAGTGTGTGTTTGTGAAACTCTCCATTTGGTTATTTGTGTTCTTGTTTGAGTTATTTCGGATGTTATTGATGTGTCCTGCTTTGACAGGCCTGCATCGATAGCTTGTACAAATTGTATTTTGTGTGTTTTTATGTTTTCTGTTATTTTCTGTATCTCTTTTACTAAGGATGGCTGCAACAATGCACGCTAAGATCAATCGGAGAAAGCTCGACAAGTTGAACATAATCAAAATTTGGTAATGGAAAAAACAGGTGGAGCTTAGTTTCTTCAATCGGTCAATGTTTGTTTAGTTTTGATTGTTGTGCGGGATATTGCAGTGAGGAGATTCTGAATCCTTCAGTTCCGATGGCTCTCAGACTCTCGGGGATTCTCATGGGTAATCATCCTTCAATTTCTTTGAATTTTCAACGACTTTAACACTCTGTTTCATCTCAGTAACAGAGTTAGTGGCTCTCTTCTTCACTATTCTCAGGTGGCGTTGTCATTGTCTATGAACGAAAAGTTAAAATCCTATACGGTAACCTTTTGATTACCTTTTATTAAGGAGTGCATTGTTTTAGAGTTCAAACGCTGTTTCTGAAGAATTGCGCACTTTGTTTTTCTGTTTTATCACAGAGGATGTAACTCGCCTTCTGGTAATTACTCAAGTTTGAGTTCTATCTACAGATTACTGTTTGCATCTTATAATGACCATGTTTTGTAAGTTTATTTTCTGAAATGATTTTTCTCAGGTTGAGATAAACGAAGCGTGGAAGGTGAAAACAGTTACAGAGCCCACCGTTATTCCCAAAGGAAAATCTCTGGCCAAGTTCGTTACTCCTTTCCTTCTTCTTATGGAAATGCACGATCATTTAATTATTCATTTATTTCGAAAAGGAACGCATGTGCATCTGAGACTATGAATAACTTGAATAGATGTCCGGGTTGCTTCCGGGCCCAAAATAAGATGGGTTCTGGACGGACTAAGAAGGTGATTTTGGCTCTGAATTTGTATGATTATGATTTTCATTTGCTTATAGTCCAAAGTAAGATGAGCTTGGGGTGGATTAAGAGAGTGATTTTGACTCTCAGTTTGTCTATTTAGGATTTTCATTCCCACAGTTTTGAAATGCTTTTTATAGGTTCATTGTCCAAAATGTAAGATGAGATTGGGGCAGGTTAAGAAGATGATTTCGACTCTGTTAGGTGGTGATTTTCATAGGTTCACAGTCGAAAATAAAATGACTTGGGTCTGAGTTGAGAGGGCAATTTTCGCTCTGAATTTGTTTGGTTATGCTTTCGTATCTCCACAGTACAAAATAATGAGTATTTGGCGGGTTAAGAAGGCGATCTTGTCTCATAATTTATCTGGGTATGATTTGTATTATATACGTCCACATGTACTCAGGAAGCAGGCAGTCACTCGGCCTAAGAAGGATCCGAGAGACATCGGAGATCATGAATCACAGTCCATTAACTTCTCCCGCAGCACCTCTCCAATGCGATTTCAACAAACCGCATTTTTTACTTTGGTAAGCCGCAGAGAAGAAGGCCTTCTTTTGGGTTCAACAGTTTATAGAAATTTAGTCAGTAGTTCCCATCTAGGTATATGTTCCATGCCAATCCAGACCACTGTAGAAGCGGAATTGGCAGATTTTAATCATATTAAGTTATAATAAGAATGATCTAGGAGAAAGACGGGAAAAATAACACTGATGAATATTGTCTTAGAAGGGAACTGATTTGTTTCGTGATTGTCATACTATTTTATGTTCTTCAAAGAAAATTATAGGAGCTCAATTACCGACTATTGATTGATAGATCTTTCTGCCTTTGCAGCGGCTCGACAGTGTGGATGAACCATATATCAATGACAAAACAATGGAAGATGATCCGTCACAAAACTTCCATCAAAGTATGTTCTGTTGCTTGAACTCATTATCACTTATTTTCTGCACAACTAATTAATTCATAATGCGTTCTACCTACTAATGATCTTAGTTATTCTGTTTCTCAGCTGATGCTGAAAATATAACCTTGCTCGAGCGTTTAGATGAGTATCAATCAAATACAAATACGTTCAATCGGTTTGAAAGGTGAATTCTTTACCAGCATGCATATAACTTGTATAATTTCCTTTGCAACTTCCACTTTCTCAAGAATTTGAGTGGGCAAAATATTTGTGATCATTGACGCTTGCTACACATACACAAATCTCAAATTATGAAGTTCTCACTTGCACCGTAGTGATAATCCAACTCGCTATTTGAAATCCCTCTGGAATGGTAAAAAGAAGCCACAACATTTATTTCTTGTGCTGGATTTGTAGATTTGATATCGAAGAAGATGAGGAAACACAGCTGAATTTTGCTTCTGTAGATCAAACACAAATTCCAGTTATACCAAGATCTTCCCCTCCTCTTGACAACTATCTAGAAGGTAAGATATATTATCGCGATTTGGTACTTAAAACGCCGTCAATTGAGTCAGTATTCCATATTCATAAATTGTAAGAATATACAGTTTTAAGTTCAACCTTCTCGTCCCATCATTTACTGGTTTTATGTTTTGGAGTCAGTACATGTCAAGCTATTTATTTTTACCGTGTGAGGAATGAAATAGATGTGAACATATGAACGTTTCATCTACTTGTTTTTAACCACAACATCCTAGAAATGTGGGCATCTGTTCCAAGCTCATGGCCTGAGGAAAGAAAAACTATAAATAGCCTCATCTCTTCTGTCTCTCATCTCTCTCAGTATATTCTTCTTTTCCTTCCTTTTAACATCTTATACAGATCAGAGTCTGCTATATTTCGACTTAATGAACACAAACTGATCGATTCATAGTCACAATTCGATTTAACTTGCTACTTCATTTCCAAAGGACTTTCATCTTTGAATGTGAATTTAGAATAAATTTCACATGTTTATGCATTCACCTCTAGGCCCTCCGGATGCTGAAGTCCAGGACCAACATCTTGAACGCAATGTCATGCAGCAAGCCTATGAACCCAAGGAGCTCAGACAGGTATTCTACTAGTATACTTGATAAAGAATACATTAACTACACAATGCAGGCTTACCAGACAATGAAAGTATCCATTCCGCACCAGGTGAAGAAGGTGGCAATAAAAAGGAAAACAAAAAGGACAGCAGCCTCTCAGATGGACTATGAACAGACCATGGTTCCTGGATACATATACCAATCTTGGCTTCAAGATGTCTCGGATCTGGTCTCTAGAAGAGGAAGAAAGAGAAAGGTTCACCTTAGTCTCCAATATGCAATTCTCAGTTTATTTGATTTTATGTATTGGTGGGCGTAGATAATTACACTTATGAACTACTCAATTCTTACGAAATTTTCTCACAAGTATCAGTGCGCTTGACTACCGACCGCAATGGTATGTCTTAGATGCTTATTCTGATGTGACATTGATAGTTGTGATAAGATTGATATTGCGCAAGATAGATAACAAAAACTATCAACTGATAAGTCAATAAAATTAAGAAATTTCATATTCTTGTGTTGCAGCGGACAGGCGCAAGGTCCTCTATGAAGGTAGCTAATCTGATGGATCTTCCACCCGTGGTGTTAAGTGGTCGCTTATTCTCAGATGGAGGTAGAGAAGTCTATTATCCAGCTCCTCTGCTAGAGTTGTGGATGAAAAGTATCAGGAACCCCCGTGACTCACCCTCTGGTTAGTATTTTCCGTAACTCGATATTTCCTTTGAAAATATATATTTAGGGGGAAAAGGAAAATGAACATTTATTTCCTGCAGTGAGGAACTCTGCAGTATTACCCCCTGAGCCATCACTGTCTTCACAGCCAGAGAGAGTAAACTTTCCAGATCGTATGGATTTTGTAAGCCGTTTAACCAACTCTACAGATTTAATTTATTTTGAATGTTGGACGAATATAATCTTCTATCTTACGAATTCTTAAATGTGAATTATAAAGCCTTTTGAAGATCATCACAGTGGAACCAACAAGAAATTAACCTCAAACAACTTTCTCCTTTCTTGTATAGTTCTAGCTTCAAGTGATTATTTAAAAGTCGACCAACAAGTTCCATTTGGAGATATTTTCATCTCGAAAGGAACAAAAATGTGA

mRNA sequence

TCGACTATGTTTTACTCGCATCAGCTACTGGCTCGCAAGGCTCCACTCGGCCAAATCTGGATGGCTGCAACAATGCACGCTAAGATCAATCGGAGAAAGCTCGACAAGTTGAACATAATCAAAATTTGTGAGGAGATTCTGAATCCTTCAGTTCCGATGGCTCTCAGACTCTCGGGGATTCTCATGGGTGGCGTTGTCATTGTCTATGAACGAAAAGTTAAAATCCTATACGAGGATGTAACTCGCCTTCTGGTTGAGATAAACGAAGCGTGGAAGGTGAAAACAGTTACAGAGCCCACCGTTATTCCCAAAGGAAAATCTCTGGCCAAGAAGCAGGCAGTCACTCGGCCTAAGAAGGATCCGAGAGACATCGGAGATCATGAATCACAGTCCATTAACTTCTCCCGCAGCACCTCTCCAATGCGATTTCAACAAACCGCATTTTTTACTTTGCGGCTCGACAGTGTGGATGAACCATATATCAATGACAAAACAATGGAAGATGATCCGTCACAAAACTTCCATCAAACTGATGCTGAAAATATAACCTTGCTCGAGCGTTTAGATGAGTATCAATCAAATACAAATACGTTCAATCGGTTTGAAAGATTTGATATCGAAGAAGATGAGGAAACACAGCTGAATTTTGCTTCTGTAGATCAAACACAAATTCCAGTTATACCAAGATCTTCCCCTCCTCTTGACAACTATCTAGAAGGCCCTCCGGATGCTGAAGTCCAGGACCAACATCTTGAACGCAATGTCATGCAGCAAGCCTATGAACCCAAGGAGCTCAGACAGGTGAAGAAGGTGGCAATAAAAAGGAAAACAAAAAGGACAGCAGCCTCTCAGATGGACTATGAACAGACCATGGTTCCTGGATACATATACCAATCTTGGCTTCAAGATGTCTCGGATCTGGTCTCTAGAAGAGGAAGAAAGAGAAAGCGGACAGGCGCAAGGTCCTCTATGAAGGTAGCTAATCTGATGGATCTTCCACCCGTGGTGTTAAGTGGTCGCTTATTCTCAGATGGAGGTAGAGAAGTCTATTATCCAGCTCCTCTGCTAGAGTTGTGGATGAAAAGTATCAGGAACCCCCGTGACTCACCCTCTGTGAGGAACTCTGCAGTATTACCCCCTGAGCCATCACTGTCTTCACAGCCAGAGAGAGTAAACTTTCCAGATCGTATGGATTTTCCTTTTGAAGATCATCACAGTGGAACCAACAAGAAATTAACCTCAAACAACTTTCTCCTTTCTTGTATAGTTCTAGCTTCAAGTGATTATTTAAAAGTCGACCAACAAGTTCCATTTGGAGATATTTTCATCTCGAAAGGAACAAAAATGTGA

Coding sequence (CDS)

ATGTTTTACTCGCATCAGCTACTGGCTCGCAAGGCTCCACTCGGCCAAATCTGGATGGCTGCAACAATGCACGCTAAGATCAATCGGAGAAAGCTCGACAAGTTGAACATAATCAAAATTTGTGAGGAGATTCTGAATCCTTCAGTTCCGATGGCTCTCAGACTCTCGGGGATTCTCATGGGTGGCGTTGTCATTGTCTATGAACGAAAAGTTAAAATCCTATACGAGGATGTAACTCGCCTTCTGGTTGAGATAAACGAAGCGTGGAAGGTGAAAACAGTTACAGAGCCCACCGTTATTCCCAAAGGAAAATCTCTGGCCAAGAAGCAGGCAGTCACTCGGCCTAAGAAGGATCCGAGAGACATCGGAGATCATGAATCACAGTCCATTAACTTCTCCCGCAGCACCTCTCCAATGCGATTTCAACAAACCGCATTTTTTACTTTGCGGCTCGACAGTGTGGATGAACCATATATCAATGACAAAACAATGGAAGATGATCCGTCACAAAACTTCCATCAAACTGATGCTGAAAATATAACCTTGCTCGAGCGTTTAGATGAGTATCAATCAAATACAAATACGTTCAATCGGTTTGAAAGATTTGATATCGAAGAAGATGAGGAAACACAGCTGAATTTTGCTTCTGTAGATCAAACACAAATTCCAGTTATACCAAGATCTTCCCCTCCTCTTGACAACTATCTAGAAGGCCCTCCGGATGCTGAAGTCCAGGACCAACATCTTGAACGCAATGTCATGCAGCAAGCCTATGAACCCAAGGAGCTCAGACAGGTGAAGAAGGTGGCAATAAAAAGGAAAACAAAAAGGACAGCAGCCTCTCAGATGGACTATGAACAGACCATGGTTCCTGGATACATATACCAATCTTGGCTTCAAGATGTCTCGGATCTGGTCTCTAGAAGAGGAAGAAAGAGAAAGCGGACAGGCGCAAGGTCCTCTATGAAGGTAGCTAATCTGATGGATCTTCCACCCGTGGTGTTAAGTGGTCGCTTATTCTCAGATGGAGGTAGAGAAGTCTATTATCCAGCTCCTCTGCTAGAGTTGTGGATGAAAAGTATCAGGAACCCCCGTGACTCACCCTCTGTGAGGAACTCTGCAGTATTACCCCCTGAGCCATCACTGTCTTCACAGCCAGAGAGAGTAAACTTTCCAGATCGTATGGATTTTCCTTTTGAAGATCATCACAGTGGAACCAACAAGAAATTAACCTCAAACAACTTTCTCCTTTCTTGTATAGTTCTAGCTTCAAGTGATTATTTAAAAGTCGACCAACAAGTTCCATTTGGAGATATTTTCATCTCGAAAGGAACAAAAATGTGA

Protein sequence

MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPRDIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENITLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPPDAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQDVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKSIRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDRMDFPFEDHHSGTNKKLTSNNFLLSCIVLASSDYLKVDQQVPFGDIFISKGTKM

Homology

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BLAST of Carg18383 vs. NCBI nr
Match: KAG7030657.1 (Sister chromatid cohesion 1 protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 876.3 bits (2263), Expect = 1.1e-250
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120

Query: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENI 180
           DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENI
Sbjct: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENI 180

Query: 181 TLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPP 240
           TLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPP
Sbjct: 181 TLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPP 240

Query: 241 DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ 300
           DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ
Sbjct: 241 DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ 300

Query: 301 DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS 360
           DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS
Sbjct: 301 DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS 360

Query: 361 IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDRMDFPFEDHHSGTNKKLTSNNFLLSCI 420
           IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDRMDFPFEDHHSGTNKKLTSNNFLLSCI
Sbjct: 361 IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDRMDFPFEDHHSGTNKKLTSNNFLLSCI 420

Query: 421 VLASSDYLKVDQQVPFGDIFISKGTKM 448
           VLASSDYLKVDQQVPFGDIFISKGTKM
Sbjct: 421 VLASSDYLKVDQQVPFGDIFISKGTKM 447

[Close]

BLAST of Carg18383 vs. NCBI nr
Match: XP_022941876.1 (sister chromatid cohesion 1 protein 1 [Cucurbita moschata])

HSP 1 Score: 791.2 bits (2042), Expect = 4.7e-225
Identity = 403/409 (98.53%), Postives = 405/409 (99.02%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120

Query: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENI 180
           DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYIND+TMEDDPSQNFHQTDAENI
Sbjct: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDRTMEDDPSQNFHQTDAENI 180

Query: 181 TLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPP 240
           TLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPP
Sbjct: 181 TLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPP 240

Query: 241 DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ 300
           DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ
Sbjct: 241 DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ 300

Query: 301 DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS 360
           DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS
Sbjct: 301 DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS 360

Query: 361 IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDRMDFPFEDHHSGTNKK 410
           IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPD MDFPFEDHHSG   +
Sbjct: 361 IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDHMDFPFEDHHSGVGSQ 409

[Close]

BLAST of Carg18383 vs. NCBI nr
Match: XP_022996758.1 (sister chromatid cohesion 1 protein 1 [Cucurbita maxima])

HSP 1 Score: 785.0 bits (2026), Expect = 3.4e-223
Identity = 400/409 (97.80%), Postives = 403/409 (98.53%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNII+ICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIEICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120

Query: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENI 180
           DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYIND+TMEDDPSQNFHQTDAENI
Sbjct: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDRTMEDDPSQNFHQTDAENI 180

Query: 181 TLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPP 240
           TLLE LDEYQSNTNTFNRFERFDIEEDEETQLNFASVD TQIPVIPRSSPPLDNYLEGPP
Sbjct: 181 TLLEPLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDHTQIPVIPRSSPPLDNYLEGPP 240

Query: 241 DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ 300
           DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ
Sbjct: 241 DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ 300

Query: 301 DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS 360
           DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS
Sbjct: 301 DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS 360

Query: 361 IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDRMDFPFEDHHSGTNKK 410
           IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPD MDFPFEDHHSG   +
Sbjct: 361 IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDHMDFPFEDHHSGVGSQ 409

[Close]

BLAST of Carg18383 vs. NCBI nr
Match: XP_023543038.1 (sister chromatid cohesion 1 protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 784.3 bits (2024), Expect = 5.7e-223
Identity = 400/409 (97.80%), Postives = 402/409 (98.29%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120

Query: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENI 180
           DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENI
Sbjct: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENI 180

Query: 181 TLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPP 240
           TLLERLDEYQSNTNTFNRFERFDIEEDE+TQLNFASVDQTQIPVIPRSSPPLDNYLEGPP
Sbjct: 181 TLLERLDEYQSNTNTFNRFERFDIEEDEDTQLNFASVDQTQIPVIPRSSPPLDNYLEGPP 240

Query: 241 DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ 300
           DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTK TAASQMDYEQTMVPGYIYQSWLQ
Sbjct: 241 DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKWTAASQMDYEQTMVPGYIYQSWLQ 300

Query: 301 DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS 360
           DVSDLVSRRGRKRKRTGARSS KVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS
Sbjct: 301 DVSDLVSRRGRKRKRTGARSSTKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS 360

Query: 361 IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDRMDFPFEDHHSGTNKK 410
           IRNPRDSPS RNSAVLPPEPSLSSQPERVNFPD MDFPFEDHHSG   +
Sbjct: 361 IRNPRDSPSARNSAVLPPEPSLSSQPERVNFPDHMDFPFEDHHSGVGSQ 409

[Close]

BLAST of Carg18383 vs. NCBI nr
Match: KAG6599976.1 (putative methyltransferase PMT23, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 733.0 bits (1891), Expect = 1.5e-207
Identity = 378/391 (96.68%), Postives = 379/391 (96.93%), Query Frame = 0


Query: 19   MAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 78
            MAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV
Sbjct: 967  MAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIVYERKVKILYEDV 1026

Query: 79   TRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPRDIGDHESQSINFSRSTSP 138
            TRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPRDIGDHESQSINFSRSTSP
Sbjct: 1027 TRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPRDIGDHESQSINFSRSTSP 1086

Query: 139  MRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENITLLERLDEYQSNTNTFNR 198
            MRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENITLLERLDEYQSNTNTFNR
Sbjct: 1087 MRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENITLLERLDEYQSNTNTFNR 1146

Query: 199  FERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPPDAEVQDQHLERNVMQQAY 258
            FERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPPDAEVQDQHLERNVMQQAY
Sbjct: 1147 FERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPPDAEVQDQHLERNVMQQAY 1206

Query: 259  EPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQDVSDLVSRRGRKRKRTGA 318
            EPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQDVSDL         RTGA
Sbjct: 1207 EPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQDVSDL---------RTGA 1266

Query: 319  RSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKSIRNPRDSPSVRNSAVLPP 378
            RSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKSIRNPRDSPSVRNSAVLPP
Sbjct: 1267 RSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKSIRNPRDSPSVRNSAVLPP 1326

Query: 379  EPSLSSQPERVNFPDRMDFPFEDHHSGTNKK 410
            EPSLSSQPERVNFPDRMDFPFEDHHSG   +
Sbjct: 1327 EPSLSSQPERVNFPDRMDFPFEDHHSGVGSQ 1348

[Close]

BLAST of Carg18383 vs. ExPASy Swiss-Prot
Match: Q9S7T7 (Sister chromatid cohesion 1 protein 1 OS=Arabidopsis thaliana OX=3702 GN=SYN1 PE=2 SV=2)

HSP 1 Score: 308.1 bits (788), Expect = 1.6e-82
Identity = 187/392 (47.70%), Postives = 254/392 (64.80%), Query Frame = 0


Query: 7   LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIV 66
           LLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILMGGVVIV
Sbjct: 17  LLARKAPLGQIWMAATLHAKINRKKLDKLDIIQICEEILNPSVPMALRLSGILMGGVVIV 76

Query: 67  YERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPRDIGDHE 126
           YERKVK+L++DV R LVEIN AW+ K+V +PT++PKGK+ A+K+AVT P+ +  D GD E
Sbjct: 77  YERKVKLLFDDVNRFLVEINGAWRTKSVPDPTLLPKGKTHARKEAVTLPENEEADFGDFE 136

Query: 127 SQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENITLLERL 186
            Q+ N  +  + M FQQT F ++RL   DE ++N+    +D  Q FHQ DAENITL E  
Sbjct: 137 -QTRNVPKFGNYMDFQQT-FISMRL---DESHVNNNPEPEDLGQQFHQADAENITLFEYH 196

Query: 187 DEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYL-EG--PPDAE 246
             +Q+N  T++RFERFDIE D+ETQ+N    +  +IP     SPP  + + EG  P   +
Sbjct: 197 GSFQTNNETYDRFERFDIEGDDETQMNSNPREGAEIPTTLIPSPPRHHDIPEGVNPTSPQ 256

Query: 247 VQDQHLER-----NVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSW 306
            Q+Q   R       M++   P +    +    K++ ++TA S MDYEQT++ G++YQSW
Sbjct: 257 RQEQQENRRDGFAEQMEEQNIPDKEEHDRPQPAKKRARKTATSAMDYEQTIIAGHVYQSW 316

Query: 307 LQDVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWM 366
           LQD SD++ R  +++ R   R  M+     ++PP     +LF    ++  YP  L +LW 
Sbjct: 317 LQDTSDILCRGEKRKVRGTIRPDMESFKRANMPPT----QLFE---KDSSYPPQLYQLWS 376

Query: 367 KSIRNPRDSPSVRNSAVLPPEPSLSSQPERVN 391
           K+ +  + S S      L  E S     ER++
Sbjct: 377 KNTQVLQTSSSESRHPDLRAEQSPGFVQERMH 396

[Close]

BLAST of Carg18383 vs. ExPASy Swiss-Prot
Match: Q9FQ19 (Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana OX=3702 GN=SYN3 PE=2 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 3.5e-13
Identity = 56/172 (32.56%), Postives = 87/172 (50.58%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSH LLARK PLG +W AA +H ++ + +   +NI    + I+ P VP+ALR S  L+
Sbjct: 1   MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTV-IPKGKSLAKKQAVTRPKKDP 120
            GVV +Y +KV  LY D   L       W  K      V +P+    A  ++VT P+   
Sbjct: 61  VGVVRIYSKKVDYLYNDWNLL-----NTWVAKAFVSTQVNLPEDARQAPPESVTLPQALN 120

Query: 121 RDIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQN 172
            D  D E  +++     +  R ++    T ++ +  +PY+     ED  S++
Sbjct: 121 LDEFDLEDDTLDM-EFDNHTRSEEDITLTDQIPTGIDPYVAVTFDEDIISES 166

[Close]

BLAST of Carg18383 vs. ExPASy Swiss-Prot
Match: Q8W1Y0 (Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana OX=3702 GN=SYN4 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-12
Identity = 46/126 (36.51%), Postives = 74/126 (58.73%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYS  +LA+K PLG IW+AA +  K+ + ++   +I    + IL P  P+ALRLS  L+
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120
            GVV +Y RKV  L++D +  L+++ +A++   V     +P  +S A   ++T P  +  
Sbjct: 61  LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVD----LPPEESTAPYHSITLP--ETF 120

Query: 121 DIGDHE 127
           D+ D E
Sbjct: 121 DLDDFE 120

[Close]

BLAST of Carg18383 vs. ExPASy Swiss-Prot
Match: Q3SWX9 (Double-strand-break repair protein rad21 homolog OS=Bos taurus OX=9913 GN=RAD21 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 9.5e-11
Identity = 48/143 (33.57%), Postives = 75/143 (52.45%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFY+H +L+++ PL +IW+AA    K+ +  + + N+    E I++P V MALR SG L+
Sbjct: 1   MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKK--- 120
            GVV +Y RK K L  D     ++I  A++   V     +P+    A   A+T P++   
Sbjct: 61  LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVD----LPEENREAAYNAITLPEEFHD 120

Query: 121 ------DPRDIGDHESQSINFSR 135
                 D  DI   +  S+N SR
Sbjct: 121 FDQPLPDLDDIDVAQQFSLNQSR 139

[Close]

BLAST of Carg18383 vs. ExPASy Swiss-Prot
Match: O60216 (Double-strand-break repair protein rad21 homolog OS=Homo sapiens OX=9606 GN=RAD21 PE=1 SV=2)

HSP 1 Score: 69.7 bits (169), Expect = 9.5e-11
Identity = 48/143 (33.57%), Postives = 75/143 (52.45%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFY+H +L+++ PL +IW+AA    K+ +  + + N+    E I++P V MALR SG L+
Sbjct: 1   MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKK--- 120
            GVV +Y RK K L  D     ++I  A++   V     +P+    A   A+T P++   
Sbjct: 61  LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVD----LPEENREAAYNAITLPEEFHD 120

Query: 121 ------DPRDIGDHESQSINFSR 135
                 D  DI   +  S+N SR
Sbjct: 121 FDQPLPDLDDIDVAQQFSLNQSR 139

[Close]

BLAST of Carg18383 vs. ExPASy TrEMBL
Match: A0A6J1FMB0 (sister chromatid cohesion 1 protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447108 PE=3 SV=1)

HSP 1 Score: 791.2 bits (2042), Expect = 2.3e-225
Identity = 403/409 (98.53%), Postives = 405/409 (99.02%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120

Query: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENI 180
           DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYIND+TMEDDPSQNFHQTDAENI
Sbjct: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDRTMEDDPSQNFHQTDAENI 180

Query: 181 TLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPP 240
           TLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPP
Sbjct: 181 TLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPP 240

Query: 241 DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ 300
           DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ
Sbjct: 241 DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ 300

Query: 301 DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS 360
           DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS
Sbjct: 301 DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS 360

Query: 361 IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDRMDFPFEDHHSGTNKK 410
           IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPD MDFPFEDHHSG   +
Sbjct: 361 IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDHMDFPFEDHHSGVGSQ 409

[Close]

BLAST of Carg18383 vs. ExPASy TrEMBL
Match: A0A6J1FMB0 (sister chromatid cohesion 1 protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447108 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-05
Identity = 32/44 (72.73%), Postives = 35/44 (79.55%), Query Frame = 0


Query: 404 SGTNKKLTSNNFLLSCIVLASSDYLKVDQQVPFGDIFISKGTKM 448
           +G N K  +  F  +C VLASSDYLKVDQQVPFGDIFISKGTKM
Sbjct: 583 AGMNCKAAAMLFYHTC-VLASSDYLKVDQQVPFGDIFISKGTKM 625

HSP 2 Score: 785.0 bits (2026), Expect = 1.6e-223
Identity = 400/409 (97.80%), Postives = 403/409 (98.53%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNII+ICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIEICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120

Query: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENI 180
           DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYIND+TMEDDPSQNFHQTDAENI
Sbjct: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDRTMEDDPSQNFHQTDAENI 180

Query: 181 TLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPP 240
           TLLE LDEYQSNTNTFNRFERFDIEEDEETQLNFASVD TQIPVIPRSSPPLDNYLEGPP
Sbjct: 181 TLLEPLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDHTQIPVIPRSSPPLDNYLEGPP 240

Query: 241 DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ 300
           DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ
Sbjct: 241 DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ 300

Query: 301 DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS 360
           DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS
Sbjct: 301 DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS 360

Query: 361 IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDRMDFPFEDHHSGTNKK 410
           IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPD MDFPFEDHHSG   +
Sbjct: 361 IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDHMDFPFEDHHSGVGSQ 409

[Close]

BLAST of Carg18383 vs. ExPASy TrEMBL
Match: A0A6J1JET8 (sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483772 PE=3 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 3.1e-190
Identity = 342/409 (83.62%), Postives = 373/409 (91.20%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVK   E TVIPKGKS+AKK+A TRPKKDP+
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEATVIPKGKSVAKKEAATRPKKDPK 120

Query: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENI 180
           D+GDHE+QSINFS  TSPM+FQQTAFFT+RLDSVDEPYI++KT+EDD S NFHQTDAENI
Sbjct: 121 DVGDHEAQSINFSYDTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180

Query: 181 TLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPP 240
           TLLER D YQSNTNTFNRFERFDIE+DE+TQ NFASVDQT+IP     SPP D Y EG P
Sbjct: 181 TLLERFDMYQSNTNTFNRFERFDIEDDEDTQSNFASVDQTKIPDTFGPSPPQDKYQEGSP 240

Query: 241 DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ 300
           +AEVQDQHLER+V+QQAYE KELRQV++VAIKRKTKRTAA  MDYE+T++PG+IYQSWL+
Sbjct: 241 EAEVQDQHLERDVIQQAYESKELRQVEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK 300

Query: 301 DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS 360
           DVSDL+SRRG+KRKRTGA SSMK+A LMDLPPVVLSGRLF+DG REVYYPAPLLELWMKS
Sbjct: 301 DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLSGRLFTDGSREVYYPAPLLELWMKS 360

Query: 361 IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDRMDFPFEDHHSGTNKK 410
           IRNP DSPSVRNSA LPPEPSLSS PERVNFPD MDF +E+ +SG   +
Sbjct: 361 IRNPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENQYSGVGSQ 409

[Close]

BLAST of Carg18383 vs. ExPASy TrEMBL
Match: A0A6J1JET8 (sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483772 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.8e-05
Identity = 31/44 (70.45%), Postives = 35/44 (79.55%), Query Frame = 0


Query: 404 SGTNKKLTSNNFLLSCIVLASSDYLKVDQQVPFGDIFISKGTKM 448
           +G N K  +  F  +C VLASSDYLKV+QQVPFGDIFISKGTKM
Sbjct: 583 AGMNPKAAAMLFYQTC-VLASSDYLKVNQQVPFGDIFISKGTKM 625

HSP 2 Score: 671.0 bits (1730), Expect = 3.4e-189
Identity = 340/409 (83.13%), Postives = 373/409 (91.20%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120
           GGVVIVYERKVKILYEDVTRLLVEINEAWKVK   EPTVIPKGKS+AKK+AVTRPKKDP+
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKAAPEPTVIPKGKSVAKKEAVTRPKKDPK 120

Query: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENI 180
           D+GDHE+QSINFS +TSPM+FQQTAFFT+RLDSVDEPYI++KT+EDD S NFHQTDAENI
Sbjct: 121 DVGDHEAQSINFSYNTSPMKFQQTAFFTMRLDSVDEPYIHEKTVEDDASHNFHQTDAENI 180

Query: 181 TLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYLEGPP 240
           TLLER D YQSNTN FNRFERFDIE+DE+TQ NFASVDQT+IP    +SPP D Y EGPP
Sbjct: 181 TLLERFDMYQSNTNAFNRFERFDIEDDEDTQPNFASVDQTKIPDTFGTSPPQDKYQEGPP 240

Query: 241 DAEVQDQHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSWLQ 300
           DAEVQDQHLER+V+QQAY  KE RQ ++VAIKRKTKRTAA  MDYE+T++PG+IYQSWL+
Sbjct: 241 DAEVQDQHLERDVIQQAYVSKEHRQEEQVAIKRKTKRTAAFLMDYEKTIIPGHIYQSWLK 300

Query: 301 DVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWMKS 360
           DVSDL+SRRG+KRKRTGA SSMK+A LMDLPPVVL GRLF+DG REVYYPAPLLELWMKS
Sbjct: 301 DVSDLISRRGKKRKRTGAMSSMKIATLMDLPPVVLCGRLFTDGSREVYYPAPLLELWMKS 360

Query: 361 IRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDRMDFPFEDHHSGTNKK 410
           IR+P DSPSVRNSA LPPEPSLSS PERVNFPD MDF +E+ +SG   +
Sbjct: 361 IRDPPDSPSVRNSAPLPPEPSLSSLPERVNFPDHMDFAYENRYSGVGSQ 409

[Close]

BLAST of Carg18383 vs. ExPASy TrEMBL
Match: A0A6J1GXZ1 (sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458512 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.8e-05
Identity = 31/44 (70.45%), Postives = 35/44 (79.55%), Query Frame = 0


Query: 404 SGTNKKLTSNNFLLSCIVLASSDYLKVDQQVPFGDIFISKGTKM 448
           +G N K  +  F  +C VLASSDYLKV+QQVPFGDIFISKGTKM
Sbjct: 583 AGMNPKAAAMLFYQTC-VLASSDYLKVNQQVPFGDIFISKGTKM 625

HSP 2 Score: 642.1 bits (1655), Expect = 1.7e-180
Identity = 334/421 (79.33%), Postives = 365/421 (86.70%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRL GILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLLGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120
           GGVVIVYERKVKILYEDVTRLLVE+NEAWKVK   EPTVIPKGKSLAKK+A+TRPKKDP+
Sbjct: 61  GGVVIVYERKVKILYEDVTRLLVELNEAWKVKAAPEPTVIPKGKSLAKKEAITRPKKDPK 120

Query: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVD-EPYINDKTMEDDPSQNFHQTDAEN 180
           ++GDHE+QSINFS +TSPMRFQQTAFFT+RLDSVD   YINDKT EDDPSQ  HQTDAEN
Sbjct: 121 EVGDHETQSINFSHNTSPMRFQQTAFFTMRLDSVDIGQYINDKTGEDDPSQQLHQTDAEN 180

Query: 181 ITLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPR-SSPPLDNYLEG 240
           ITLLER D YQSNTNTFN+FERFDIEEDEET LNFA  +QTQIP   R S PP D + EG
Sbjct: 181 ITLLERFDMYQSNTNTFNQFERFDIEEDEETHLNFAFXEQTQIPDTSRPSPPPQDMHREG 240

Query: 241 PPDAEVQD----------QHLERNVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQT 300
           PPDAE+QD          QHLERNV+QQ YE KELR V++ AI+RKTKRTAAS MDYEQT
Sbjct: 241 PPDAEIQDPHFHDVEIPEQHLERNVIQQTYESKELRHVQQAAIRRKTKRTAASHMDYEQT 300

Query: 301 MVPGYIYQSWLQDVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVY 360
           ++PG+IYQSWLQDVSDL S RGRKRKRT A SS+K++ LMDLPPVVLSG LF+DGGREVY
Sbjct: 301 IIPGHIYQSWLQDVSDLNSGRGRKRKRTSAMSSIKISVLMDLPPVVLSGNLFTDGGREVY 360

Query: 361 YPAPLLELWMKSIRNPRDSPSVRNSAVLPPEPSLSSQPERVNFPDRMDFPFEDHHSGTNK 410
           YPAPLL+LWMKSIR+P DS S R+SA  PPEPSLSS+PE VNFPD +DFPFE +HSG   
Sbjct: 361 YPAPLLQLWMKSIRHPHDSSSGRDSAPQPPEPSLSSRPESVNFPDDIDFPFEGYHSGVGS 420

[Close]

BLAST of Carg18383 vs. TAIR 10
Match: AT5G05490.2 (Rad21/Rec8-like family protein )

HSP 1 Score: 321.6 bits (823), Expect = 9.8e-88
Identity = 193/398 (48.49%), Postives = 260/398 (65.33%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSHQLLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILM
Sbjct: 1   MFYSHQLLARKAPLGQIWMAATLHAKINRKKLDKLDIIQICEEILNPSVPMALRLSGILM 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120
           GGVVIVYERKVK+L++DV R LVEIN AW+ K+V +PT++PKGK+ A+K+AVT P+ +  
Sbjct: 61  GGVVIVYERKVKLLFDDVNRFLVEINGAWRTKSVPDPTLLPKGKTHARKEAVTLPENEEA 120

Query: 121 DIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENI 180
           D GD E Q+ N  +  + M FQQT F ++RL   DE ++N+    +D  Q FHQ DAENI
Sbjct: 121 DFGDFE-QTRNVPKFGNYMDFQQT-FISMRL---DESHVNNNPEPEDLGQQFHQADAENI 180

Query: 181 TLLERLDEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYL-EG- 240
           TL E    +Q+N  T++RFERFDIE D+ETQ+N    +  +IP     SPP  + + EG 
Sbjct: 181 TLFEYHGSFQTNNETYDRFERFDIEGDDETQMNSNPREGAEIPTTLIPSPPRHHDIPEGV 240

Query: 241 -PPDAEVQDQHLER-----NVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPG 300
            P   + Q+Q   R       M++   P +    +    K++ ++TA S MDYEQT++ G
Sbjct: 241 NPTSPQRQEQQENRRDGFAEQMEEQNIPDKEEHDRPQPAKKRARKTATSAMDYEQTIIAG 300

Query: 301 YIYQSWLQDVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAP 360
           ++YQSWLQD SD++ R  +++ R   R  M+     ++PP     +LF    ++  YP  
Sbjct: 301 HVYQSWLQDTSDILCRGEKRKVRGTIRPDMESFKRANMPPT----QLFE---KDSSYPPQ 360

Query: 361 LLELWMKSIRNPRDSPSVRNSAVLPPEPSLSSQPERVN 391
           L +LW K+ +  + S S      L  E S     ER++
Sbjct: 361 LYQLWSKNTQVLQTSSSESRHPDLRAEQSPGFVQERMH 386

[Close]

BLAST of Carg18383 vs. TAIR 10
Match: AT5G05490.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 308.1 bits (788), Expect = 1.1e-83
Identity = 187/392 (47.70%), Postives = 254/392 (64.80%), Query Frame = 0


Query: 7   LLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILMGGVVIV 66
           LLARKAPLGQIWMAAT+HAKINR+KLDKL+II+ICEEILNPSVPMALRLSGILMGGVVIV
Sbjct: 17  LLARKAPLGQIWMAATLHAKINRKKLDKLDIIQICEEILNPSVPMALRLSGILMGGVVIV 76

Query: 67  YERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPRDIGDHE 126
           YERKVK+L++DV R LVEIN AW+ K+V +PT++PKGK+ A+K+AVT P+ +  D GD E
Sbjct: 77  YERKVKLLFDDVNRFLVEINGAWRTKSVPDPTLLPKGKTHARKEAVTLPENEEADFGDFE 136

Query: 127 SQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTDAENITLLERL 186
            Q+ N  +  + M FQQT F ++RL   DE ++N+    +D  Q FHQ DAENITL E  
Sbjct: 137 -QTRNVPKFGNYMDFQQT-FISMRL---DESHVNNNPEPEDLGQQFHQADAENITLFEYH 196

Query: 187 DEYQSNTNTFNRFERFDIEEDEETQLNFASVDQTQIPVIPRSSPPLDNYL-EG--PPDAE 246
             +Q+N  T++RFERFDIE D+ETQ+N    +  +IP     SPP  + + EG  P   +
Sbjct: 197 GSFQTNNETYDRFERFDIEGDDETQMNSNPREGAEIPTTLIPSPPRHHDIPEGVNPTSPQ 256

Query: 247 VQDQHLER-----NVMQQAYEPKELRQVKKVAIKRKTKRTAASQMDYEQTMVPGYIYQSW 306
            Q+Q   R       M++   P +    +    K++ ++TA S MDYEQT++ G++YQSW
Sbjct: 257 RQEQQENRRDGFAEQMEEQNIPDKEEHDRPQPAKKRARKTATSAMDYEQTIIAGHVYQSW 316

Query: 307 LQDVSDLVSRRGRKRKRTGARSSMKVANLMDLPPVVLSGRLFSDGGREVYYPAPLLELWM 366
           LQD SD++ R  +++ R   R  M+     ++PP     +LF    ++  YP  L +LW 
Sbjct: 317 LQDTSDILCRGEKRKVRGTIRPDMESFKRANMPPT----QLFE---KDSSYPPQLYQLWS 376

Query: 367 KSIRNPRDSPSVRNSAVLPPEPSLSSQPERVN 391
           K+ +  + S S      L  E S     ER++
Sbjct: 377 KNTQVLQTSSSESRHPDLRAEQSPGFVQERMH 396

[Close]

BLAST of Carg18383 vs. TAIR 10
Match: AT3G59550.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 77.8 bits (190), Expect = 2.5e-14
Identity = 56/172 (32.56%), Postives = 87/172 (50.58%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYSH LLARK PLG +W AA +H ++ + +   +NI    + I+ P VP+ALR S  L+
Sbjct: 1   MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTV-IPKGKSLAKKQAVTRPKKDP 120
            GVV +Y +KV  LY D   L       W  K      V +P+    A  ++VT P+   
Sbjct: 61  VGVVRIYSKKVDYLYNDWNLL-----NTWVAKAFVSTQVNLPEDARQAPPESVTLPQALN 120

Query: 121 RDIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQN 172
            D  D E  +++     +  R ++    T ++ +  +PY+     ED  S++
Sbjct: 121 LDEFDLEDDTLDM-EFDNHTRSEEDITLTDQIPTGIDPYVAVTFDEDIISES 166

[Close]

BLAST of Carg18383 vs. TAIR 10
Match: AT5G16270.1 (sister chromatid cohesion 1 protein 4 )

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-13
Identity = 46/126 (36.51%), Postives = 74/126 (58.73%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSVPMALRLSGILM 60
           MFYS  +LA+K PLG IW+AA +  K+ + ++   +I    + IL P  P+ALRLS  L+
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL 60

Query: 61  GGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKKDPR 120
            GVV +Y RKV  L++D +  L+++ +A++   V     +P  +S A   ++T P  +  
Sbjct: 61  LGVVRIYSRKVNYLFDDCSEALLKVKQAFRSAAVD----LPPEESTAPYHSITLP--ETF 120

Query: 121 DIGDHE 127
           D+ D E
Sbjct: 121 DLDDFE 120

[Close]

BLAST of Carg18383 vs. TAIR 10
Match: AT5G40840.1 (Rad21/Rec8-like family protein )

HSP 1 Score: 53.5 bits (127), Expect = 5.0e-07
Identity = 49/183 (26.78%), Postives = 88/183 (48.09%), Query Frame = 0


Query: 1   MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIIKICEEILNPSV-PMALRLSGIL 60
           MFYSH L++RK PLG IW+AA    K+ + ++   +I    ++IL   +  +  R+   L
Sbjct: 1   MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60

Query: 61  MGGVVIVYERKVKILYEDVTRLLVEINEAWKVKTVTEPTVIPKGKSLAKKQAVTRPKK-- 120
           + GVV +Y +KV  L++D  + L+ + E    +   E T +    S+ +  ++  P++  
Sbjct: 61  LLGVVRIYSKKVDFLFDDCNKALIGVKEFVAKERNREKTGVSLPASI-ECFSIALPERFE 120

Query: 121 -DPRDIGDHESQSINFSRSTSPMRFQQTAFFTLRLDSVDEPYINDKTMEDDPSQNFHQTD 180
            D  D+G  E       +    +  +  +  T R+D       +   ME+D    FH+T 
Sbjct: 121 LDAFDLGVLEDFHGGNVKPHEDITLKDGSQETERMDMYSMERFD---MEEDLLFTFHETF 179

The following BLAST results are available for this feature:

BLAST of Carg18383 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030657.1	1.1e-250	100.00	Sister chromatid cohesion 1 protein 1 [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022941876.1	4.7e-225	98.53	sister chromatid cohesion 1 protein 1 [Cucurbita moschata]	[more]
XP_022996758.1	3.4e-223	97.80	sister chromatid cohesion 1 protein 1 [Cucurbita maxima]	[more]
XP_023543038.1	5.7e-223	97.80	sister chromatid cohesion 1 protein 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6599976.1	1.5e-207	96.68	putative methyltransferase PMT23, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of Carg18383 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7T7	1.6e-82	47.70	Sister chromatid cohesion 1 protein 1 OS=Arabidopsis thaliana OX=3702 GN=SYN1 PE...	[more]
Q9FQ19	3.5e-13	32.56	Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana OX=3702 GN=SYN3 PE...	[more]
Q8W1Y0	1.7e-12	36.51	Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana OX=3702 GN=SYN4 PE...	[more]
Q3SWX9	9.5e-11	33.57	Double-strand-break repair protein rad21 homolog OS=Bos taurus OX=9913 GN=RAD21 ...	[more]
O60216	9.5e-11	33.57	Double-strand-break repair protein rad21 homolog OS=Homo sapiens OX=9606 GN=RAD2...	[more]

BLAST of Carg18383 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FMB0	2.3e-225	98.53	sister chromatid cohesion 1 protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447...	[more]
A0A6J1FMB0	1.6e-05	72.73	sister chromatid cohesion 1 protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111447...	[more]
A0A6J1JET8	3.1e-190	83.62	sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1JET8	2.8e-05	70.45	sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1GXZ1	2.8e-05	70.45	sister chromatid cohesion 1 protein 1-like isoform X1 OS=Cucurbita moschata OX=3...	[more]

BLAST of Carg18383 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05490.2	9.8e-88	48.49	Rad21/Rec8-like family protein	[more]
AT5G05490.1	1.1e-83	47.70	Rad21/Rec8-like family protein	[more]
AT3G59550.1	2.5e-14	32.56	Rad21/Rec8-like family protein	[more]
AT5G16270.1	1.2e-13	36.51	sister chromatid cohesion 1 protein 4	[more]
AT5G40840.1	5.0e-07	26.78	Rad21/Rec8-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006909	Rad21/Rec8-like protein, C-terminal, eukaryotic	PFAM	PF04824	Rad21_Rec8	coord: 405..447 e-value: 1.3E-6 score: 27.6
IPR006910	Rad21/Rec8-like protein, N-terminal	PFAM	PF04825	Rad21_Rec8_N	coord: 1..96 e-value: 2.4E-35 score: 121.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..388
None	No IPR available	PANTHER	PTHR12585:SF64	SISTER CHROMATID COHESION 1 PROTEIN 1	coord: 1..409 coord: 419..447
IPR039781	Rad21/Rec8-like protein	PANTHER	PTHR12585	SCC1 / RAD21 FAMILY MEMBER	coord: 419..447
IPR039781	Rad21/Rec8-like protein	PANTHER	PTHR12585	SCC1 / RAD21 FAMILY MEMBER	coord: 1..409
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 385..447

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18383-RA	Carg18383-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010032	meiotic chromosome condensation
biological_process	GO:0051754	meiotic sister chromatid cohesion, centromeric
biological_process	GO:0051455	monopolar spindle attachment to meiosis I kinetochore
biological_process	GO:0007062	sister chromatid cohesion
cellular_component	GO:0008278	cohesin complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding