Carg18330 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18330
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-type E3 ubiquitin transferase
Location	Carg_Chr04: 1024422 .. 1025588 (+)
RNA-Seq Expression	Carg18330
Synteny	Carg18330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCGATGGCGGCGGCGTCGTCCTACTGGTGTTATCGATGCAGTCGATTTGTTAGGGCTTCGAATCAGGAATCTGTTGTGTGCCCCGATTGTAATAGTGGGTTCGTTGAACAAATTGATCATCCATTGAGCTTGCGGAACATGGAAACGGCGCCGCGGAGGAGGTTTCCAGCGTCGGCGATGTATATGATTGGTCATCGGTCGAATTCGGGGCAGAATTTGGGATCTGCGATTCGGAGACCACGAAGGAATGGAGGGGATCGATCGCCGTTTAATCCTGTCATAGTTCTTCGTGGGCCGCCTGATGGGAGTGAAGGTGGAGAAAGTCGTCGGTTCGAGCTTTATTACGATGATGGTACTGGTTCTGGCCTGAGACCTCTGCCTCCGAGTATGTCGGAGTTTTTGTTAGGGTCAGGGTTTGATAGGCTTCTGGAGCAACTTTCTCAGATTGAAATGAACAGCATTGGGCAATTTGAAACCCCACCAGCGTCCAAATCTGCGATTGAGTCAATGCCCACTATTCGAATCTGTGAAAATCATTTGGAAACTGAGTCGCACTGTGCTGTTTGTAAAGAGGCATTCGAATTGGGAAACGAAGCACGGGAGATGCCCTGCACGCATATCTACCATTCTGATTGCATTCTACCTTGGCTTTCAATTCGAAATTCCTGTCCGGTATGTCGCCACGAACTGCCTTCGGATAACCAAGACTCATTGGATGCTGCTGAAATTGGCGTGAATGGGGGTTCAATGACCTCAAATGTGGATGAGAATGGGGGGTTAACCATATGGAGGCTACCAGGTGGGGGGTTTGCAGTAGGGCGGTTCCATGGAGGGAGGAGAGGTGGGGAGAGAGAGCTCCCTGTTGTGTACACTGAGGTGGATGGTGCTTTTACAAATGGCGGCGTTCCTAGAAGGGTATCATTTGGATCGAGACGCGGGAGAGGGAGGGAAAGAGGCGGGTGGAGGCGCTTTGTTCGCAATATGTTCGGATGTTTCAGGCAACAACCAATGAGGTCGTCTGCGGCATATACTTCAAGTTCCAGCCCTGATTCTGGTCCTTCGAGGAGTAGTAGTAGTAGACCACTCCCGCAGATGAACGCAGAGCCAAGGCAACGGCGGACATGGTCTATGGAGGTTAACAGCGGGACAATCAGCTGGTGA

mRNA sequence

ATGTCGTCGATGGCGGCGGCGTCGTCCTACTGGTGTTATCGATGCAGTCGATTTGTTAGGGCTTCGAATCAGGAATCTGTTGTGTGCCCCGATTGTAATAGTGGGTTCGTTGAACAAATTGATCATCCATTGAGCTTGCGGAACATGGAAACGGCGCCGCGGAGGAGGTTTCCAGCGTCGGCGATGTATATGATTGGTCATCGGTCGAATTCGGGGCAGAATTTGGGATCTGCGATTCGGAGACCACGAAGGAATGGAGGGGATCGATCGCCGTTTAATCCTGTCATAGTTCTTCGTGGGCCGCCTGATGGGAGTGAAGGTGGAGAAAGTCGTCGGTTCGAGCTTTATTACGATGATGGTACTGGTTCTGGCCTGAGACCTCTGCCTCCGAGTATGTCGGAGTTTTTGTTAGGGTCAGGGTTTGATAGGCTTCTGGAGCAACTTTCTCAGATTGAAATGAACAGCATTGGGCAATTTGAAACCCCACCAGCGTCCAAATCTGCGATTGAGTCAATGCCCACTATTCGAATCTGTGAAAATCATTTGGAAACTGAGTCGCACTGTGCTGTTTGTAAAGAGGCATTCGAATTGGGAAACGAAGCACGGGAGATGCCCTGCACGCATATCTACCATTCTGATTGCATTCTACCTTGGCTTTCAATTCGAAATTCCTGTCCGGTATGTCGCCACGAACTGCCTTCGGATAACCAAGACTCATTGGATGCTGCTGAAATTGGCGTGAATGGGGGTTCAATGACCTCAAATGTGGATGAGAATGGGGGGTTAACCATATGGAGGCTACCAGGTGGGGGGTTTGCAGTAGGGCGGTTCCATGGAGGGAGGAGAGGTGGGGAGAGAGAGCTCCCTGTTGTGTACACTGAGGTGGATGGTGCTTTTACAAATGGCGGCGTTCCTAGAAGGGTATCATTTGGATCGAGACGCGGGAGAGGGAGGGAAAGAGGCGGGTGGAGGCGCTTTGTTCGCAATATGTTCGGATGTTTCAGGCAACAACCAATGAGGTCGTCTGCGGCATATACTTCAAGTTCCAGCCCTGATTCTGGTCCTTCGAGGAGTAGTAGTAGTAGACCACTCCCGCAGATGAACGCAGAGCCAAGGCAACGGCGGACATGGTCTATGGAGGTTAACAGCGGGACAATCAGCTGGTGA

Coding sequence (CDS)

ATGTCGTCGATGGCGGCGGCGTCGTCCTACTGGTGTTATCGATGCAGTCGATTTGTTAGGGCTTCGAATCAGGAATCTGTTGTGTGCCCCGATTGTAATAGTGGGTTCGTTGAACAAATTGATCATCCATTGAGCTTGCGGAACATGGAAACGGCGCCGCGGAGGAGGTTTCCAGCGTCGGCGATGTATATGATTGGTCATCGGTCGAATTCGGGGCAGAATTTGGGATCTGCGATTCGGAGACCACGAAGGAATGGAGGGGATCGATCGCCGTTTAATCCTGTCATAGTTCTTCGTGGGCCGCCTGATGGGAGTGAAGGTGGAGAAAGTCGTCGGTTCGAGCTTTATTACGATGATGGTACTGGTTCTGGCCTGAGACCTCTGCCTCCGAGTATGTCGGAGTTTTTGTTAGGGTCAGGGTTTGATAGGCTTCTGGAGCAACTTTCTCAGATTGAAATGAACAGCATTGGGCAATTTGAAACCCCACCAGCGTCCAAATCTGCGATTGAGTCAATGCCCACTATTCGAATCTGTGAAAATCATTTGGAAACTGAGTCGCACTGTGCTGTTTGTAAAGAGGCATTCGAATTGGGAAACGAAGCACGGGAGATGCCCTGCACGCATATCTACCATTCTGATTGCATTCTACCTTGGCTTTCAATTCGAAATTCCTGTCCGGTATGTCGCCACGAACTGCCTTCGGATAACCAAGACTCATTGGATGCTGCTGAAATTGGCGTGAATGGGGGTTCAATGACCTCAAATGTGGATGAGAATGGGGGGTTAACCATATGGAGGCTACCAGGTGGGGGGTTTGCAGTAGGGCGGTTCCATGGAGGGAGGAGAGGTGGGGAGAGAGAGCTCCCTGTTGTGTACACTGAGGTGGATGGTGCTTTTACAAATGGCGGCGTTCCTAGAAGGGTATCATTTGGATCGAGACGCGGGAGAGGGAGGGAAAGAGGCGGGTGGAGGCGCTTTGTTCGCAATATGTTCGGATGTTTCAGGCAACAACCAATGAGGTCGTCTGCGGCATATACTTCAAGTTCCAGCCCTGATTCTGGTCCTTCGAGGAGTAGTAGTAGTAGACCACTCCCGCAGATGAACGCAGAGCCAAGGCAACGGCGGACATGGTCTATGGAGGTTAACAGCGGGACAATCAGCTGGTGA

Protein sequence

MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPASAMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICENHLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSLDAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFTNGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSSSRPLPQMNAEPRQRRTWSMEVNSGTISW

Homology

[Close]

BLAST of Carg18330 vs. NCBI nr
Match: KAG6600041.1 (putative E3 ubiquitin-protein ligase RHC2A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030710.1 putative E3 ubiquitin-protein ligase RHC2A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 793.1 bits (2047), Expect = 1.1e-225
Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS
Sbjct: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
           TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN
Sbjct: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240
           HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240

Query: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT
Sbjct: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300

Query: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS 360
           NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS
Sbjct: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS 360

Query: 361 SRPLPQMNAEPRQRRTWSMEVNSGTISW 389
           SRPLPQMNAEPRQRRTWSMEVNSGTISW
Sbjct: 361 SRPLPQMNAEPRQRRTWSMEVNSGTISW 388

[Close]

BLAST of Carg18330 vs. NCBI nr
Match: XP_022941698.1 (probable E3 ubiquitin-protein ligase RHC2A [Cucurbita moschata])

HSP 1 Score: 785.8 bits (2028), Expect = 1.7e-223
Identity = 385/388 (99.23%), Postives = 385/388 (99.23%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS
Sbjct: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNS QNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
           TGSGLRPLPPSMSEFLLGSGFDRLLEQLS IEMNSIGQFETPPASKSAIESMPTIRICEN
Sbjct: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPPASKSAIESMPTIRICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240
           HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240

Query: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT
Sbjct: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300

Query: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS 360
           NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS
Sbjct: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS 360

Query: 361 SRPLPQMNAEPRQRRTWSMEVNSGTISW 389
           SRPLPQMNAEPRQRRTWSMEVNSGT SW
Sbjct: 361 SRPLPQMNAEPRQRRTWSMEVNSGTSSW 388

[Close]

BLAST of Carg18330 vs. NCBI nr
Match: XP_023514100.1 (probable E3 ubiquitin-protein ligase RHC2A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 778.1 bits (2008), Expect = 3.6e-221
Identity = 383/389 (98.46%), Postives = 384/389 (98.71%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS
Sbjct: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
           TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN
Sbjct: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240
           HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDN DSL
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNPDSL 240

Query: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAEIGVNGGS+TSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT
Sbjct: 241 DAAEIGVNGGSITSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300

Query: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFR-QQPMRSSAAYTSSSSPDSGPSRSS 360
           NGGVPRRVS GSRRGRGRE GGWRRFVRNMFGCFR QQPMRSSAAYTSSSSPDSGPSRSS
Sbjct: 301 NGGVPRRVSIGSRRGRGREGGGWRRFVRNMFGCFRQQQPMRSSAAYTSSSSPDSGPSRSS 360

Query: 361 SSRPLPQMNAEPRQRRTWSMEVNSGTISW 389
           SSRPLPQMN EPRQRRTWSMEVNSGTISW
Sbjct: 361 SSRPLPQMNTEPRQRRTWSMEVNSGTISW 389

[Close]

BLAST of Carg18330 vs. NCBI nr
Match: XP_022995937.1 (probable E3 ubiquitin-protein ligase RHC2A [Cucurbita maxima])

HSP 1 Score: 774.6 bits (1999), Expect = 3.9e-220
Identity = 378/388 (97.42%), Postives = 382/388 (98.45%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCSRFVRASNQE+VVCPDCNSGFVEQIDHP+SLRNMETAPRRRFPAS
Sbjct: 1   MSSMAAASSYWCYRCSRFVRASNQEAVVCPDCNSGFVEQIDHPVSLRNMETAPRRRFPAS 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
           TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN
Sbjct: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240
           HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240

Query: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT
Sbjct: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300

Query: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS 360
           NGGVPRRVSFGSR GRGR RGGWRR VR+MFGCFR QP+RSS AYTSSSSPDSGPSRSSS
Sbjct: 301 NGGVPRRVSFGSRGGRGRVRGGWRRIVRHMFGCFRHQPVRSSVAYTSSSSPDSGPSRSSS 360

Query: 361 SRPLPQMNAEPRQRRTWSMEVNSGTISW 389
           SRPLPQMN EPRQRRTWSMEVNSGTISW
Sbjct: 361 SRPLPQMNTEPRQRRTWSMEVNSGTISW 388

[Close]

BLAST of Carg18330 vs. NCBI nr
Match: XP_022138905.1 (probable E3 ubiquitin-protein ligase RHC2A [Momordica charantia])

HSP 1 Score: 669.5 bits (1726), Expect = 1.8e-188
Identity = 335/388 (86.34%), Postives = 351/388 (90.46%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCSRFVR SNQ+SVVCPDCNSGFVEQI+HP  L N+E APRRRFPA+
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSGQNLGS +RR RRNGGDRS FNPVIVLRGP DGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSGLRRSRRNGGDRSQFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
            GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN IG+FE PPASK+AIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240
           HLETESHCAVCKEAFELGNEAREMPC HIYHSDCILPWLSIRNSCPVCRHELPSDNQ+S 
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCKHIYHSDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAE G NGG +TSN +EN GLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDG FT
Sbjct: 241 DAAESGENGGPVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS 360
           NGGVPRRVSF S RGRGRERGGW R +RN+F CF    MRS+A+ TSSS  DSGPSR  S
Sbjct: 301 NGGVPRRVSFAS-RGRGRERGGWSRILRNLFACFGGS-MRSTAS-TSSSPTDSGPSR--S 360

Query: 361 SRPLPQMNAEPRQRRTWSMEVNSGTISW 389
           SRPLP  N EPRQRRTWSMEVNSGT+SW
Sbjct: 361 SRPLPHFNTEPRQRRTWSMEVNSGTMSW 383

[Close]

BLAST of Carg18330 vs. ExPASy Swiss-Prot
Match: O22283 (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 1.3e-85
Identity = 196/404 (48.51%), Postives = 246/404 (60.89%), Query Frame = 0


Query: 6   AASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMET----------APRR 65
           A+ SYWCY CSRFV  S  +S+ CPDC+ GF+E I  PL     ++          +P R
Sbjct: 2   ASGSYWCYSCSRFVWVS--DSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTR 61

Query: 66  RFPASAMYMIGHRSNSGQN--LGSAIRRPRRNGGDRSPFNPVIVLRGPPDG------SEG 125
             P S+       S    N    + + R R N   RSP NPVIVLRG          SEG
Sbjct: 62  FPPPSSSSSTPSASMHADNSPTPTIVTRTRSN---RSP-NPVIVLRGSAAAPSSDVVSEG 121

Query: 126 GESRRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN---SIGQFETPPA 185
            +   F++YYDDGT SGLRPLPPSM+EFLLGSGFDRLL+Q+SQIE+N   ++   E PPA
Sbjct: 122 LDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPA 181

Query: 186 SKSAIESMPTIRICENHL--ETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIR 245
           SKSAIE++P I I   HL  +++SHCAVCKE F L + AREMPC HIYH DCILPWL+IR
Sbjct: 182 SKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIR 241

Query: 246 NSCPVCRHELPSDNQDSLDAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRR 305
           NSCPVCRHELP+++      A +     +     D   GLTIWRLPGGGFAVGR  GG R
Sbjct: 242 NSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWR 301

Query: 306 GGERELPVVYTEVDGA-FTNGGVPRRVSFGSRR-----GRGRER-GGWRRFVRNMFGCF- 365
           GG+R +PVVYTEVDG    +  +PRRV++GSRR     G  RER GG+   +  +FGCF 
Sbjct: 302 GGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLFGCFS 361

Query: 366 -RQQPMRSSAAYTSSSSPDSGPSRSSSSRPLPQMNAEPRQRRTW 378
                + ++AA +S S      +R + S  +    +   +RR W
Sbjct: 362 GSSGSIAAAAAASSGSGSRIRVTRRTRSFSMFSTASSSSRRRNW 399

[Close]

BLAST of Carg18330 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.3e-76
Identity = 193/417 (46.28%), Postives = 239/417 (57.31%), Query Frame = 0


Query: 8   SSYWCYRCSRFVR------ASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPASA 67
           +SYWCY C+RFV        +   SV CP C+ GF+EQI+   S      A     PAS 
Sbjct: 16  ASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSS-----AATELTIPAST 75

Query: 68  MYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGES-------RRFE 127
                   +   N  S IR  RR  G R  FNPVIVL+G     E GE        R FE
Sbjct: 76  -----EVRSINNNRRSVIR--RRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFE 135

Query: 128 LYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNS--IGQFETPPASKSAIESM 187
            YYDDG+GSGLRPLP S+SE L+GSGF+RLLEQLSQIE ++  IG+   PPASKSAIES+
Sbjct: 136 FYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESL 195

Query: 188 PTIRICENHLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHEL 247
           P + I + H+ +E++CAVC E FE   EAREMPC H++H DCI+PWLSIRNSCPVCR EL
Sbjct: 196 PRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFEL 255

Query: 248 PSDNQDSLDAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVY 307
           PS+            N  S  +  D   G+TIWRLPGGGFAVGRF+   R GER LPVV 
Sbjct: 256 PSE-----------PNRRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVL 315

Query: 308 TEVDGAFTNGGV------PRRVSF----------GSRRGRGRERGG-WRRFVRNMFGCFR 367
           TE+DG    GG+      PRR+S+           +  G G   GG  RR VR M    R
Sbjct: 316 TEMDG----GGIGNSQDGPRRISWVRSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMR 375

Query: 368 Q-QPMR---SSAAYTSSSSPDSGPSRSSSSRPLPQMNAEPRQ--RRTWSMEVNSGTI 387
           + +P R   SS+A  S+SS +   +    SR L + N+  R+  RR  S   +S ++
Sbjct: 376 RVRPNRSSSSSSAAISTSSDNLDLNIEVESRVLDRSNSVMRRYFRRNRSNRDSSSSV 405

[Close]

BLAST of Carg18330 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 5.6e-76
Identity = 180/370 (48.65%), Postives = 215/370 (58.11%), Query Frame = 0


Query: 8   SSYWCYRCSRFVRASNQE----SVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPASAMY 67
           +SYWCY C+RF+     +     V+CP CN GF+E+I+   S  +   A     P     
Sbjct: 29  TSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIED--SSNSTVAAIPASTPEVRSV 88

Query: 68  MIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEG------------GESR 127
              HR        S IRR R N   R+ FNPVIVL G   G  G             E R
Sbjct: 89  EETHR--------SIIRRRRSN--RRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERR 148

Query: 128 RFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEM--NSIGQFETPPASKSAI 187
            +E YYDDG+GSGLRPLP S+SE L+GSGF+RLLEQLSQIE   N IG+   PPASKSAI
Sbjct: 149 AYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAI 208

Query: 188 ESMPTIRICENHLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCR 247
           ES+P + I + H + E++CAVC E FE G E REMPC HI+H DCI+PWLSIRNSCPVCR
Sbjct: 209 ESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 268

Query: 248 HELPSDNQDSLDAAEIGVNGGSMTSNVDENG-GLTIWRLPGGGFAVGRFHGGRRGGEREL 307
            ELPSD                  SN +E+  G+TIWRLPGGGFAVGRF+ G R GER L
Sbjct: 269 FELPSD--------------PIQRSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREGERIL 328

Query: 308 PVVYTEVDGA--FTNGGVPRRVSF------------GSRRGRGRERGGWRRFVRNMFGCF 344
           PVV TE+DG    +N G PRR+S+            G R G G   G  RR VR M    
Sbjct: 329 PVVLTEMDGGGLGSNEG-PRRISWVRAHETPEMSRNGGRSGNG---GRLRRAVRGMVSFM 368

[Close]

BLAST of Carg18330 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.3e-35
Identity = 90/278 (32.37%), Postives = 146/278 (52.52%), Query Frame = 0


Query: 10  YWCYRCSRFVRAS---NQESVVCPDCNSGFVEQIDHPLSLR-------NMETAPRR---- 69
           ++CY+C+R V  +         CP CN GF+E+ D+P   +       N  + P      
Sbjct: 23  FFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHDLFL 82

Query: 70  ------------RFPASAMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPD 129
                        FP+S+       ++   N  S     R   GD   F+P   ++   +
Sbjct: 83  TLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFTFIQNHLN 142

Query: 130 GSEGGESRRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPP 189
                 ++   +  ++ +  G R LP ++ ++ +G G ++L++QL++ + N  G   TPP
Sbjct: 143 DLRSSGAQIEFVIQNNPSDQGFR-LPANIGDYFIGPGLEQLIQQLAENDPNRYG---TPP 202

Query: 190 ASKSAIESMPTIRICENHLETE-SHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIR 249
           ASKSAIE++P + I +++L +E + CAVC + FE G EA++MPC H+YH DC+LPWL + 
Sbjct: 203 ASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELH 262

Query: 250 NSCPVCRHELPSDNQDSLDAAEIGVNGGSMTSNVDENG 261
           NSCPVCRHELP+D+ D  +    G  G S  ++ D +G
Sbjct: 263 NSCPVCRHELPTDDPD-YERRVRGAQGTSGGNDGDNSG 295

[Close]

BLAST of Carg18330 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.3e-32
Identity = 95/277 (34.30%), Postives = 142/277 (51.26%), Query Frame = 0


Query: 5   AAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQID----HPLSLRNMETAPRRR---- 64
           ++ +++WC+RC R VR   QE  VC  C  GFVE++D     P  +         R    
Sbjct: 3   SSRNTHWCHRCQRAVRLHGQEP-VCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQTF 62

Query: 65  --FPASAMYM---IGHRSNSGQNLGSAIRRPRRNGGDRSP-FNPVIVLRGPPDGSEGGES 124
               A +++M   +  RS+  +  G  I     +G +  P   P+++  G       G++
Sbjct: 63  DLMDAFSVFMRNRLAERSHDREIRGRTI----SSGPENFPGLAPLLIFGGQVPYRLTGDN 122

Query: 125 RRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIE 184
               L+  +G   G+     +  ++  G G + L EQLS        +   PPA +SAI+
Sbjct: 123 AVEALF--NGGSPGIGITRGNTGDYFFGPGLEELFEQLSA----GTTRRGPPPAPRSAID 182

Query: 185 SMPTIRICENHL-ETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCR 244
           ++PTI+I + HL  ++S+C VCK+ FELG+EA++MPC HIYHSDCI+PWL   NSCPVCR
Sbjct: 183 ALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCR 242

Query: 245 HELPSDNQDS------LDAAEIGVNGGSMTSNVDENG 261
            ELPS +  S              +  S +SN  ENG
Sbjct: 243 QELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENG 268

[Close]

BLAST of Carg18330 vs. ExPASy TrEMBL
Match: A0A6J1FSU7 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111446981 PE=4 SV=1)

HSP 1 Score: 785.8 bits (2028), Expect = 8.3e-224
Identity = 385/388 (99.23%), Postives = 385/388 (99.23%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS
Sbjct: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNS QNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSRQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
           TGSGLRPLPPSMSEFLLGSGFDRLLEQLS IEMNSIGQFETPPASKSAIESMPTIRICEN
Sbjct: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSHIEMNSIGQFETPPASKSAIESMPTIRICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240
           HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240

Query: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT
Sbjct: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300

Query: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS 360
           NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS
Sbjct: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS 360

Query: 361 SRPLPQMNAEPRQRRTWSMEVNSGTISW 389
           SRPLPQMNAEPRQRRTWSMEVNSGT SW
Sbjct: 361 SRPLPQMNAEPRQRRTWSMEVNSGTSSW 388

[Close]

BLAST of Carg18330 vs. ExPASy TrEMBL
Match: A0A6J1K0D0 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111491304 PE=4 SV=1)

HSP 1 Score: 774.6 bits (1999), Expect = 1.9e-220
Identity = 378/388 (97.42%), Postives = 382/388 (98.45%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCSRFVRASNQE+VVCPDCNSGFVEQIDHP+SLRNMETAPRRRFPAS
Sbjct: 1   MSSMAAASSYWCYRCSRFVRASNQEAVVCPDCNSGFVEQIDHPVSLRNMETAPRRRFPAS 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
           TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN
Sbjct: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240
           HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240

Query: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT
Sbjct: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300

Query: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS 360
           NGGVPRRVSFGSR GRGR RGGWRR VR+MFGCFR QP+RSS AYTSSSSPDSGPSRSSS
Sbjct: 301 NGGVPRRVSFGSRGGRGRVRGGWRRIVRHMFGCFRHQPVRSSVAYTSSSSPDSGPSRSSS 360

Query: 361 SRPLPQMNAEPRQRRTWSMEVNSGTISW 389
           SRPLPQMN EPRQRRTWSMEVNSGTISW
Sbjct: 361 SRPLPQMNTEPRQRRTWSMEVNSGTISW 388

[Close]

BLAST of Carg18330 vs. ExPASy TrEMBL
Match: A0A6J1CAT7 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111009972 PE=4 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 8.7e-189
Identity = 335/388 (86.34%), Postives = 351/388 (90.46%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCSRFVR SNQ+SVVCPDCNSGFVEQI+HP  L N+E APRRRFPA+
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSGQNLGS +RR RRNGGDRS FNPVIVLRGP DGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSGLRRSRRNGGDRSQFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
            GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN IG+FE PPASK+AIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240
           HLETESHCAVCKEAFELGNEAREMPC HIYHSDCILPWLSIRNSCPVCRHELPSDNQ+S 
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCKHIYHSDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAE G NGG +TSN +EN GLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDG FT
Sbjct: 241 DAAESGENGGPVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS 360
           NGGVPRRVSF S RGRGRERGGW R +RN+F CF    MRS+A+ TSSS  DSGPSR  S
Sbjct: 301 NGGVPRRVSFAS-RGRGRERGGWSRILRNLFACFGGS-MRSTAS-TSSSPTDSGPSR--S 360

Query: 361 SRPLPQMNAEPRQRRTWSMEVNSGTISW 389
           SRPLP  N EPRQRRTWSMEVNSGT+SW
Sbjct: 361 SRPLPHFNTEPRQRRTWSMEVNSGTMSW 383

[Close]

BLAST of Carg18330 vs. ExPASy TrEMBL
Match: A0A5A7UA14 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00480 PE=4 SV=1)

HSP 1 Score: 661.0 bits (1704), Expect = 3.1e-186
Identity = 330/388 (85.05%), Postives = 350/388 (90.21%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCS FVR SNQ+SVVCPDCNSGFVEQI+ P  L N+E APRRRFPA+
Sbjct: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIG+RSNSGQNLGS +RR RRNGGDRSPFNPVIVLRGP DGSE GESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
            GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN IG+FE PPASK+AIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240
           HL TESHCAVCKEAFELGNEAREMPC HIYH DCILPWLS+RNSCPVCRHELPSDNQ+SL
Sbjct: 181 HLATESHCAVCKEAFELGNEAREMPCKHIYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAE G NGGS+TSN +EN GLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDG FT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS 360
           NGG+PRRVSF S RGRGRERGGW R +RNMF CF    MRS A+ TS+S+ DSGPSR  S
Sbjct: 301 NGGLPRRVSFAS-RGRGRERGGWGRMIRNMFACFGGS-MRSIAS-TSNSTSDSGPSR--S 360

Query: 361 SRPLPQMNAEPRQRRTWSMEVNSGTISW 389
           SRPLP  N+EPR+RRTWSMEVNSGTISW
Sbjct: 361 SRPLPHFNSEPRRRRTWSMEVNSGTISW 383

[Close]

BLAST of Carg18330 vs. ExPASy TrEMBL
Match: A0A1S3CGL6 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103500230 PE=4 SV=1)

HSP 1 Score: 661.0 bits (1704), Expect = 3.1e-186
Identity = 330/388 (85.05%), Postives = 350/388 (90.21%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPAS 60
           MSSMAAASSYWCYRCS FVR SNQ+SVVCPDCNSGFVEQI+ P  L N+E APRRRFPA+
Sbjct: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGESRRFELYYDDG 120
           AMYMIG+RSNSGQNLGS +RR RRNGGDRSPFNPVIVLRGP DGSE GESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 TGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIESMPTIRICEN 180
            GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN IG+FE PPASK+AIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHELPSDNQDSL 240
           HL TESHCAVCKEAFELGNEAREMPC HIYH DCILPWLS+RNSCPVCRHELPSDNQ+SL
Sbjct: 181 HLATESHCAVCKEAFELGNEAREMPCKHIYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGAFT 300
           DAAE G NGGS+TSN +EN GLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDG FT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRVSFGSRRGRGRERGGWRRFVRNMFGCFRQQPMRSSAAYTSSSSPDSGPSRSSS 360
           NGG+PRRVSF S RGRGRERGGW R +RNMF CF    MRS A+ TS+S+ DSGPSR  S
Sbjct: 301 NGGLPRRVSFAS-RGRGRERGGWGRMIRNMFACFGGS-MRSIAS-TSNSTSDSGPSR--S 360

Query: 361 SRPLPQMNAEPRQRRTWSMEVNSGTISW 389
           SRPLP  N+EPR+RRTWSMEVNSGTISW
Sbjct: 361 SRPLPHFNSEPRRRRTWSMEVNSGTISW 383

[Close]

BLAST of Carg18330 vs. TAIR 10
Match: AT2G39720.1 (RING-H2 finger C2A )

HSP 1 Score: 318.2 bits (814), Expect = 9.4e-87
Identity = 196/404 (48.51%), Postives = 246/404 (60.89%), Query Frame = 0


Query: 6   AASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQIDHPLSLRNMET----------APRR 65
           A+ SYWCY CSRFV  S  +S+ CPDC+ GF+E I  PL     ++          +P R
Sbjct: 2   ASGSYWCYSCSRFVWVS--DSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTR 61

Query: 66  RFPASAMYMIGHRSNSGQN--LGSAIRRPRRNGGDRSPFNPVIVLRGPPDG------SEG 125
             P S+       S    N    + + R R N   RSP NPVIVLRG          SEG
Sbjct: 62  FPPPSSSSSTPSASMHADNSPTPTIVTRTRSN---RSP-NPVIVLRGSAAAPSSDVVSEG 121

Query: 126 GESRRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN---SIGQFETPPA 185
            +   F++YYDDGT SGLRPLPPSM+EFLLGSGFDRLL+Q+SQIE+N   ++   E PPA
Sbjct: 122 LDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPA 181

Query: 186 SKSAIESMPTIRICENHL--ETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIR 245
           SKSAIE++P I I   HL  +++SHCAVCKE F L + AREMPC HIYH DCILPWL+IR
Sbjct: 182 SKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIR 241

Query: 246 NSCPVCRHELPSDNQDSLDAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRR 305
           NSCPVCRHELP+++      A +     +     D   GLTIWRLPGGGFAVGR  GG R
Sbjct: 242 NSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWR 301

Query: 306 GGERELPVVYTEVDGA-FTNGGVPRRVSFGSRR-----GRGRER-GGWRRFVRNMFGCF- 365
           GG+R +PVVYTEVDG    +  +PRRV++GSRR     G  RER GG+   +  +FGCF 
Sbjct: 302 GGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLFGCFS 361

Query: 366 -RQQPMRSSAAYTSSSSPDSGPSRSSSSRPLPQMNAEPRQRRTW 378
                + ++AA +S S      +R + S  +    +   +RR W
Sbjct: 362 GSSGSIAAAAAASSGSGSRIRVTRRTRSFSMFSTASSSSRRRNW 399

[Close]

BLAST of Carg18330 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 287.0 bits (733), Expect = 2.3e-77
Identity = 193/417 (46.28%), Postives = 239/417 (57.31%), Query Frame = 0


Query: 8   SSYWCYRCSRFVR------ASNQESVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPASA 67
           +SYWCY C+RFV        +   SV CP C+ GF+EQI+   S      A     PAS 
Sbjct: 16  ASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSS-----AATELTIPAST 75

Query: 68  MYMIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEGGES-------RRFE 127
                   +   N  S IR  RR  G R  FNPVIVL+G     E GE        R FE
Sbjct: 76  -----EVRSINNNRRSVIR--RRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFE 135

Query: 128 LYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNS--IGQFETPPASKSAIESM 187
            YYDDG+GSGLRPLP S+SE L+GSGF+RLLEQLSQIE ++  IG+   PPASKSAIES+
Sbjct: 136 FYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESL 195

Query: 188 PTIRICENHLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCRHEL 247
           P + I + H+ +E++CAVC E FE   EAREMPC H++H DCI+PWLSIRNSCPVCR EL
Sbjct: 196 PRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFEL 255

Query: 248 PSDNQDSLDAAEIGVNGGSMTSNVDENGGLTIWRLPGGGFAVGRFHGGRRGGERELPVVY 307
           PS+            N  S  +  D   G+TIWRLPGGGFAVGRF+   R GER LPVV 
Sbjct: 256 PSE-----------PNRRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVL 315

Query: 308 TEVDGAFTNGGV------PRRVSF----------GSRRGRGRERGG-WRRFVRNMFGCFR 367
           TE+DG    GG+      PRR+S+           +  G G   GG  RR VR M    R
Sbjct: 316 TEMDG----GGIGNSQDGPRRISWVRSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMR 375

Query: 368 Q-QPMR---SSAAYTSSSSPDSGPSRSSSSRPLPQMNAEPRQ--RRTWSMEVNSGTI 387
           + +P R   SS+A  S+SS +   +    SR L + N+  R+  RR  S   +S ++
Sbjct: 376 RVRPNRSSSSSSAAISTSSDNLDLNIEVESRVLDRSNSVMRRYFRRNRSNRDSSSSV 405

[Close]

BLAST of Carg18330 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 286.2 bits (731), Expect = 4.0e-77
Identity = 180/370 (48.65%), Postives = 215/370 (58.11%), Query Frame = 0


Query: 8   SSYWCYRCSRFVRASNQE----SVVCPDCNSGFVEQIDHPLSLRNMETAPRRRFPASAMY 67
           +SYWCY C+RF+     +     V+CP CN GF+E+I+   S  +   A     P     
Sbjct: 29  TSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIED--SSNSTVAAIPASTPEVRSV 88

Query: 68  MIGHRSNSGQNLGSAIRRPRRNGGDRSPFNPVIVLRGPPDGSEG------------GESR 127
              HR        S IRR R N   R+ FNPVIVL G   G  G             E R
Sbjct: 89  EETHR--------SIIRRRRSN--RRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERR 148

Query: 128 RFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEM--NSIGQFETPPASKSAI 187
            +E YYDDG+GSGLRPLP S+SE L+GSGF+RLLEQLSQIE   N IG+   PPASKSAI
Sbjct: 149 AYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAI 208

Query: 188 ESMPTIRICENHLETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCR 247
           ES+P + I + H + E++CAVC E FE G E REMPC HI+H DCI+PWLSIRNSCPVCR
Sbjct: 209 ESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 268

Query: 248 HELPSDNQDSLDAAEIGVNGGSMTSNVDENG-GLTIWRLPGGGFAVGRFHGGRRGGEREL 307
            ELPSD                  SN +E+  G+TIWRLPGGGFAVGRF+ G R GER L
Sbjct: 269 FELPSD--------------PIQRSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREGERIL 328

Query: 308 PVVYTEVDGA--FTNGGVPRRVSF------------GSRRGRGRERGGWRRFVRNMFGCF 344
           PVV TE+DG    +N G PRR+S+            G R G G   G  RR VR M    
Sbjct: 329 PVVLTEMDGGGLGSNEG-PRRISWVRAHETPEMSRNGGRSGNG---GRLRRAVRGMVSFM 368

[Close]

BLAST of Carg18330 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 142.1 bits (357), Expect = 9.2e-34
Identity = 95/277 (34.30%), Postives = 142/277 (51.26%), Query Frame = 0


Query: 5   AAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQID----HPLSLRNMETAPRRR---- 64
           ++ +++WC+RC R VR   QE  VC  C  GFVE++D     P  +         R    
Sbjct: 3   SSRNTHWCHRCQRAVRLHGQEP-VCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQTF 62

Query: 65  --FPASAMYM---IGHRSNSGQNLGSAIRRPRRNGGDRSP-FNPVIVLRGPPDGSEGGES 124
               A +++M   +  RS+  +  G  I     +G +  P   P+++  G       G++
Sbjct: 63  DLMDAFSVFMRNRLAERSHDREIRGRTI----SSGPENFPGLAPLLIFGGQVPYRLTGDN 122

Query: 125 RRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIE 184
               L+  +G   G+     +  ++  G G + L EQLS        +   PPA +SAI+
Sbjct: 123 AVEALF--NGGSPGIGITRGNTGDYFFGPGLEELFEQLSA----GTTRRGPPPAPRSAID 182

Query: 185 SMPTIRICENHL-ETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCR 244
           ++PTI+I + HL  ++S+C VCK+ FELG+EA++MPC HIYHSDCI+PWL   NSCPVCR
Sbjct: 183 ALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCR 242

Query: 245 HELPSDNQDS------LDAAEIGVNGGSMTSNVDENG 261
            ELPS +  S              +  S +SN  ENG
Sbjct: 243 QELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENG 268

[Close]

BLAST of Carg18330 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 142.1 bits (357), Expect = 9.2e-34
Identity = 95/277 (34.30%), Postives = 142/277 (51.26%), Query Frame = 0


Query: 5   AAASSYWCYRCSRFVRASNQESVVCPDCNSGFVEQID----HPLSLRNMETAPRRR---- 64
           ++ +++WC+RC R VR   QE  VC  C  GFVE++D     P  +         R    
Sbjct: 3   SSRNTHWCHRCQRAVRLHGQEP-VCFYCGGGFVEELDMAQASPFDMFRSHRGVVERDQTF 62

Query: 65  --FPASAMYM---IGHRSNSGQNLGSAIRRPRRNGGDRSP-FNPVIVLRGPPDGSEGGES 124
               A +++M   +  RS+  +  G  I     +G +  P   P+++  G       G++
Sbjct: 63  DLMDAFSVFMRNRLAERSHDREIRGRTI----SSGPENFPGLAPLLIFGGQVPYRLTGDN 122

Query: 125 RRFELYYDDGTGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNSIGQFETPPASKSAIE 184
               L+  +G   G+     +  ++  G G + L EQLS        +   PPA +SAI+
Sbjct: 123 AVEALF--NGGSPGIGITRGNTGDYFFGPGLEELFEQLSA----GTTRRGPPPAPRSAID 182

Query: 185 SMPTIRICENHL-ETESHCAVCKEAFELGNEAREMPCTHIYHSDCILPWLSIRNSCPVCR 244
           ++PTI+I + HL  ++S+C VCK+ FELG+EA++MPC HIYHSDCI+PWL   NSCPVCR
Sbjct: 183 ALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCR 242

Query: 245 HELPSDNQDS------LDAAEIGVNGGSMTSNVDENG 261
            ELPS +  S              +  S +SN  ENG
Sbjct: 243 QELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENG 268

The following BLAST results are available for this feature:

BLAST of Carg18330 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600041.1	1.1e-225	100.00	putative E3 ubiquitin-protein ligase RHC2A, partial [Cucurbita argyrosperma subs...	[more]
XP_022941698.1	1.7e-223	99.23	probable E3 ubiquitin-protein ligase RHC2A [Cucurbita moschata]	[more]
XP_023514100.1	3.6e-221	98.46	probable E3 ubiquitin-protein ligase RHC2A [Cucurbita pepo subsp. pepo]	[more]
XP_022995937.1	3.9e-220	97.42	probable E3 ubiquitin-protein ligase RHC2A [Cucurbita maxima]	[more]
XP_022138905.1	1.8e-188	86.34	probable E3 ubiquitin-protein ligase RHC2A [Momordica charantia]	[more]

BLAST of Carg18330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22283	1.3e-85	48.51	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q940T5	3.3e-76	46.28	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
Q9SNB6	5.6e-76	48.65	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
P0CH30	1.3e-35	32.37	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
O22197	1.3e-32	34.30	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]

BLAST of Carg18330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSU7	8.3e-224	99.23	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111446981...	[more]
A0A6J1K0D0	1.9e-220	97.42	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111491304 P...	[more]
A0A6J1CAT7	8.7e-189	86.34	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11100997...	[more]
A0A5A7UA14	3.1e-186	85.05	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CGL6	3.1e-186	85.05	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103500230 PE=4 ...	[more]

BLAST of Carg18330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39720.1	9.4e-87	48.51	RING-H2 finger C2A	[more]
AT5G59550.1	2.3e-77	46.28	zinc finger (C3HC4-type RING finger) family protein	[more]
AT3G46620.1	4.0e-77	48.65	zinc finger (C3HC4-type RING finger) family protein	[more]
AT2G40830.2	9.2e-34	34.30	RING-H2 finger C1A	[more]
AT2G40830.1	9.2e-34	34.30	RING-H2 finger C1A	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 188..228 e-value: 5.2E-7 score: 39.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 187..229 e-value: 2.1E-10 score: 40.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 188..229 score: 12.017182
IPR010543	Domain of unknown function DUF1117	PFAM	PF06547	DUF1117	coord: 261..360 e-value: 3.0E-35 score: 121.2
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 9..40 e-value: 7.2E-14 score: 51.8
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 151..235 e-value: 2.8E-20 score: 73.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 338..388
None	No IPR available	PANTHER	PTHR15710:SF112	E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE PROTEIN	coord: 6..332
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 6..332
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 188..229 e-value: 1.63031E-23 score: 90.0696
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 168..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18330-RA	Carg18330-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity