Carg18319 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18319
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Armadillo-type fold containing protein
Location	Carg_Chr04: 1079401 .. 1082744 (-)
RNA-Seq Expression	Carg18319
Synteny	Carg18319

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGACATACTCTTCTCTCAATTATGCTTGAGAGTACCACAAGTTTCTGACTTACCAATTGGAGATGATATGCCACGTGGCAGAGTTATGGATTACTCAGGTGAAAGTAAAACGATAGGGGTTACTGAATCTGAAGCTAAACTTGAGGAGAAAAGCAGATTTATTAAAACTTATAATAATCCTCTTGATCATGAGACAGCCTCCATGGCTGCATTACTGCTTCAGGGACAGACAATTGTCCCGATGCAGTTGATCTCGCATGTTCCTGCTGCTCTGTTCTACTGGCCATTGATTCAACTTGCTGGAGCAGCAACAGACAACATTGCTTTAGGTGTTGCTGTTGGAAGCCAAGCAAGAGGGAACCACCCAGGTGCCGCCTCTGACATACGGTCGCATGCTTTACTCCTGACTGGCTAAGTTGCCATTCTGATTCATCTGCTTTCCAAGAAGTGGATGGGGAACAATTTTTCAGGTGATTCCACATATTCTACCTAACCTCCCCCCCCCCCCCCTTCTCAGACCCTGATATGTTAACTTTGTTGGGGTTTTGCAGAGAGCTTCTAGATGATACGGATTCAAGGGTCGCTTATTACTCTTCAGCGTTTCTTTTGAAGGCAAGGAAATTCCTCTCCACCGCGAAAATGTATTTGTATGAAATTTCAAATTTCTTTTTCCTTTCGTAACTGAAGGAATTTTTTTTATTTTCAGCGTATGATGACAGAGAAACCTGAAAAGTACCAATACATGCTTCAGAATCTTGTAATTAAAGCTCAGCAGGTGATGTTTTCATATTTGTTGTCAAATACAGATTCTGATTTGGTTAATATATCCTGAACACCATTAATCTATTTGTCTTGGCAATCACATCATCTCTAGTATTGTTACTGGCCATAAACAAAGTTCAGTTTGATTTACCAAATCAGTGAGGGGAAAAAGAGAAGTTGGGGTTGGTTATACACTAGACATGCCCTTTGGTCAGCCTTGTTTTAATGGGAAGCAAATAATAATAATGAATTAAAAAGATCAAATAAACCCCGTAATGATTGGTGTACATTGGAAACTTTAGGGTTCATATACTTTAAATTTGTTTTCGCATGCACTGAACATTATTACTTGGAGGCTGTGGTGCCTTTTTATAAGCAGATATTTGACTTGGCTGCTGGCTTACTATCTCTTTTTCATGTACGGTTTTTATTTTTAAGAACAAGCAAGGGTTGTATTGAAATAGAAAGAGCATATAAGAAAAAGAGGGAAAGAAGAAACCCAACGGTCACACTCACAGCTTGGGAGATTACAATTGCTCTCCCGTCAACCATAGAGGTTTTAGTGATTTACAATACAGTGGCAGTACTCTCTGATAATGAAAGTCCCCAAAGAAATGAAAAGACAAGAAAAAACATTAAAAAGAAGACTAGAGCCCTATTATGCTTCCACGTTTCTTTTTTCTTTTATTTTCTCCTAATGCTAAAAGTTCCTGCTCATCCTAAAATAACAGAAATGATTGATATACAAATTAATTACTTGTTCTAATTTCTTTTCTTTTAATTATAAATGACTAATTTTAAATTCGTTTGAAGTAGTTGATTGATGAATTTTGATCTAACTTTATACTATTAGTTATTTTATAGAAAAGTATAATTTGATTTTAAATAATAAATCAGTGGAAATCTACATCATATTTTATAAAATTCGTTGCGCCCCTTCAGGTCTCTTGTGATATTGCTCGAATAACTTCTAACCGAGATGTTCTCTTCATTTGATTGTTGAGCTCAAATTGCTAACATGCTTGCTTGCTTTCTTCTCCCACCATGCAGAGCAATAATGAGAAGCTATTGGAAAATCCATACCTTCAGATGCGTGGTATACTTAAGCTAGCAAATGATATGGGCATTGAGTTGTGATCTACTTTGATTTTCTAGAAGCATTCTGCTCTTGACATGGATAATTATCACATTCAGCGGTGTGCTCAACAAGTTTTGATACCCATAATGTTCAATCACTCTCTTTATTTCCCATCTCTAGAGCATATGAAGAAATGCACCTGACTAAGTGTACACGAAAGAGCTCATCTACTCATATGGGAACTTAATTTAGCTCAAGCTAGGTCAATGACTATCCATTGAAAAAGGCGGCAGTGATACAATGGGATGATCTTGTTTATTCATAGTTTTATCTTGCCATTGTACAGTTGGTTCTTGAATTCGGCCATCAACTCTGTGGTTTTTCTTTTCTAAGCACGCACAAAGATGGTGAGCTAATTTGATGACTGGGCCTGTGATTAGCTGTTGTAGAGATTCCTCCTTGACTATGCCAATTAACTCTTCTTTTCAACCATACGTCAAGAAGAAAGCAACTAAGGCATTCGGGAAAGCCGTTTGAATTGCTCCATCAATTGATTTGTCTGCCTCATTCTGCCACAAATCATTGGGAATGGAAGTTTTTTCATATTTTCATCAGGTACTACCTATTATCTCTTCAAATTTTAAATACCATCTCCATGCTTCTCTTATGAAGACTGTTTACTTTATGTTGCAACTTGGAATATACTGTGAGAAACCTATCAAATCACCTTAGAGACTTGCATACATTGACTGAATCTGACATTTTTTCAATAGTTCCTGTACTGATACTTTCTTTTTTCTTTTTTTTTTCTTTTTTTTTTTTTTTTTTAAATTTATTTGGAAACAGCTGTATGTTGTGTATAATGTTTTGGGACAGATTGCAAGTGAAACTTGAGAAGATTCATTTCATTTGTACAGAACCACATTACTCCAGCAATCCCTCTGTTTTTCGTCTTCCTGAAGGGGCAGTCCTTTAACCATGTTTTTATCTGTGTTTTTTCAAGTCTGTAAAGTCAGCTTAACTGATGGAGAGAAAATATCATCAAAATATATTATATTCAACATGGCTCAGGAGTCTCATTTTTCAGAGCATTGCAGGTGTCCAATATTTTTAGGACATTCAACTGCCTGCTTGCCTGGTATGGGTTTTTCTGGAAGCTATCTTTGTGATAACCATTATTATTGTTTCAACATTCATCTTTCTTGTGATTCAGTTCTTGGTAATCTGAAATGTTCATTTTTGTTTGTTATATTGATATCTGAAAGTGTATTGTGCAGCTGCTCAAAAATGGTTTACGTGTAGAAGAAGATGAATGTTTATAGTTTAGCAATTCAGGCTCCATTTATGTACCAAGAAATGGAAGAATTCATATGACCATTTTGCTTAAAATCGTAATTGTTGCCAATTGATACAATGATTTTGGGCAAAGCCTTTTACAATCAAAACTTTTTTTTAGCTATCCCTATAATTTAAGGGTGATTTGTGTAGTTTACAAAGAA

mRNA sequence

ATGTGTGACATACTCTTCTCTCAATTATGCTTGAGAGTACCACAAGTTTCTGACTTACCAATTGGAGATGATATGCCACGTGGCAGAGTTATGGATTACTCAGGTGAAAGTAAAACGATAGGGGTTACTGAATCTGAAGCTAAACTTGAGGAGAAAAGCAGATTTATTAAAACTTATAATAATCCTCTTGATCATGAGACAGCCTCCATGGCTGCATTACTGCTTCAGGGACAGACAATTGTCCCGATGCAGTTGATCTCGCATGTTCCTGCTGCTCTGTTCTACTGGCCATTGATTCAACTTGCTGGAGCAGCAACAGACAACATTGCTTTAGGTGTTGCTGTTGGAAGCCAAGCAAGAGGGAACCACCCAGACCCTGATATGTTAACTTTGTTGGGGTTTTGCAGAGAGCTTCTAGATGATACGGATTCAAGGGTCGCTTATTACTCTTCAGCGTTTCTTTTGAAGGCAAGGAAATTCCTCTCCACCGCGAAAATGAATTTTTTTTATTTTCAGCGTATGATGACAGAGAAACCTGAAAAGTACCAATACATGCTTCAGAATCTTGTAATTAAAGCTCAGCAGAGCAATAATGAGAAGCTATTGGAAAATCCATACCTTCAGATGCGTGGTATACTTAAGCTAGCAAATGATATGGGCATTGAGTTGTGATCTACTTTGATTTTCTAGAAGCATTCTGCTCTTGACATGGATAATTATCACATTCAGCGGTGTGCTCAACAAGTTTTGATACCCATAATGTTCAATCACTCTCTTTATTTCCCATCTCTAGAGCATATGAAGAAATGCACCTGACTAAGTGTACACGAAAGAGCTCATCTACTCATATGGGAACTTAATTTAGCTCAAGCTAGGTCAATGACTATCCATTGAAAAAGGCGGCAGTGATACAATGGGATGATCTTGTTTATTCATAGTTTTATCTTGCCATTGTACAGTTGGTTCTTGAAGCACGCACAAAGATGGTGAGCTAATTTGATGACTGGGCCTGTGATTAGCTGTTGTAGAGATTCCTCCTTGACTATGCCAATTAACTCTTCTTTTCAACCATACGTCAAGAAGAAAGCAACTAAGGCATTCGGGAAAGCCGTTTGAATTGCTCCATCAATTGATTTGTCTGCCTCATTCTGCCACAAATCATTGGGAATGGAAGTTTTTTCATATTTTCATCAGCTGTATGTTGTGTATAATGTTTTGGGACAGATTGCAAGTGAAACTTGAGAAGATTCATTTCATTTGTACAGAACCACATTACTCCAGCAATCCCTCTGTTTTTCGTCTTCCTGAAGGGGCAGTCCTTTAACCATGTTTTTATCTGTGTTTTTTCAAGTCTGTAAAGTCAGCTTAACTGATGGAGAGAAAATATCATCAAAATATATTATATTCAACATGGCTCAGGAGTCTCATTTTTCAGAGCATTGCAGGTGTCCAATATTTTTAGGACATTCAACTGCCTGCTTGCCTGGTATGGGTTTTTCTGGAAGCTATCTTTGTGATAACCATTATTATTGTTTCAACATTCATCTTTCTTGTGATTCAGTTCTTGGTAATCTGAAATGTTCATTTTTGTTTGTTATATTGATATCTGAAAGTGTATTGTGCAGCTGCTCAAAAATGGTTTACGTGTAGAAGAAGATGAATGTTTATAGTTTAGCAATTCAGGCTCCATTTATGTACCAAGAAATGGAAGAATTCATATGACCATTTTGCTTAAAATCGTAATTGTTGCCAATTGATACAATGATTTTGGGCAAAGCCTTTTACAATCAAAACTTTTTTTTAGCTATCCCTATAATTTAAGGGTGATTTGTGTAGTTTACAAAGAA

Coding sequence (CDS)

ATGTGTGACATACTCTTCTCTCAATTATGCTTGAGAGTACCACAAGTTTCTGACTTACCAATTGGAGATGATATGCCACGTGGCAGAGTTATGGATTACTCAGGTGAAAGTAAAACGATAGGGGTTACTGAATCTGAAGCTAAACTTGAGGAGAAAAGCAGATTTATTAAAACTTATAATAATCCTCTTGATCATGAGACAGCCTCCATGGCTGCATTACTGCTTCAGGGACAGACAATTGTCCCGATGCAGTTGATCTCGCATGTTCCTGCTGCTCTGTTCTACTGGCCATTGATTCAACTTGCTGGAGCAGCAACAGACAACATTGCTTTAGGTGTTGCTGTTGGAAGCCAAGCAAGAGGGAACCACCCAGACCCTGATATGTTAACTTTGTTGGGGTTTTGCAGAGAGCTTCTAGATGATACGGATTCAAGGGTCGCTTATTACTCTTCAGCGTTTCTTTTGAAGGCAAGGAAATTCCTCTCCACCGCGAAAATGAATTTTTTTTATTTTCAGCGTATGATGACAGAGAAACCTGAAAAGTACCAATACATGCTTCAGAATCTTGTAATTAAAGCTCAGCAGAGCAATAATGAGAAGCTATTGGAAAATCCATACCTTCAGATGCGTGGTATACTTAAGCTAGCAAATGATATGGGCATTGAGTTGTGA

Protein sequence

MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYNNPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQARGNHPDPDMLTLLGFCRELLDDTDSRVAYYSSAFLLKARKFLSTAKMNFFYFQRMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLANDMGIEL

Homology

[Close]

BLAST of Carg18319 vs. NCBI nr
Match: KAG7030721.1 (hypothetical protein SDJN02_04758, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 439.5 bits (1129), Expect = 1.7e-119
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN 60
           MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN
Sbjct: 1   MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN 60

Query: 61  NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR 120
           NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR
Sbjct: 61  NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR 120

Query: 121 GNHPDPDMLTLLGFCRELLDDTDSRVAYYSSAFLLKARKFLSTAKMNFFYFQRMMTEKPE 180
           GNHPDPDMLTLLGFCRELLDDTDSRVAYYSSAFLLKARKFLSTAKMNFFYFQRMMTEKPE
Sbjct: 121 GNHPDPDMLTLLGFCRELLDDTDSRVAYYSSAFLLKARKFLSTAKMNFFYFQRMMTEKPE 180

Query: 181 KYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLANDMGIEL 224
           KYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLANDMGIEL
Sbjct: 181 KYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLANDMGIEL 223

[Close]

BLAST of Carg18319 vs. NCBI nr
Match: XP_022975884.1 (uncharacterized protein LOC111476453 [Cucurbita maxima])

HSP 1 Score: 371.3 bits (952), Expect = 5.8e-99
Identity = 200/243 (82.30%), Postives = 201/243 (82.72%), Query Frame = 0


Query: 1    MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN 60
            MCDILFSQLCLRVPQVSDLPIGDDMPRG+VMDYSGESKTIGVTESEAKLEEKSRFIKTYN
Sbjct: 972  MCDILFSQLCLRVPQVSDLPIGDDMPRGKVMDYSGESKTIGVTESEAKLEEKSRFIKTYN 1031

Query: 61   NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR 120
            NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR
Sbjct: 1032 NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR 1091

Query: 121  GNHP--------------------DPDMLTLLGFCRELLDDTDSRVAYYSSAFLLKARKF 180
            GNHP                    D      LGFCRELLDDTDSRVAYYSSAFLLK    
Sbjct: 1092 GNHPGAASDIRSALLLLLIAKCSSDSSAFXPLGFCRELLDDTDSRVAYYSSAFLLK---- 1151

Query: 181  LSTAKMNFFYFQRMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLANDMG 224
                        RMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLANDMG
Sbjct: 1152 ------------RMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLANDMG 1198

[Close]

BLAST of Carg18319 vs. NCBI nr
Match: XP_022942242.1 (uncharacterized protein LOC111447349 isoform X2 [Cucurbita moschata])

HSP 1 Score: 362.5 bits (929), Expect = 2.7e-96
Identity = 199/246 (80.89%), Postives = 201/246 (81.71%), Query Frame = 0


Query: 1    MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN 60
            MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN
Sbjct: 889  MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN 948

Query: 61   NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR 120
            NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR
Sbjct: 949  NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR 1008

Query: 121  GNHPDPD-------MLTLLGFC----------------RELLDDTDSRVAYYSSAFLLKA 180
            GNHP          +L L+  C                RELLDDTDSRVAYYSSAFLLK 
Sbjct: 1009 GNHPGAASDIRSALLLLLIAKCSSDSSAFQEVDGEQFFRELLDDTDSRVAYYSSAFLLK- 1068

Query: 181  RKFLSTAKMNFFYFQRMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLAN 224
                           RMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLAN
Sbjct: 1069 ---------------RMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLAN 1118

[Close]

BLAST of Carg18319 vs. NCBI nr
Match: XP_022942239.1 (uncharacterized protein LOC111447349 isoform X1 [Cucurbita moschata] >XP_022942241.1 uncharacterized protein LOC111447349 isoform X1 [Cucurbita moschata])

HSP 1 Score: 362.5 bits (929), Expect = 2.7e-96
Identity = 199/246 (80.89%), Postives = 201/246 (81.71%), Query Frame = 0


Query: 1    MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN 60
            MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN
Sbjct: 972  MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN 1031

Query: 61   NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR 120
            NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR
Sbjct: 1032 NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR 1091

Query: 121  GNHPDPD-------MLTLLGFC----------------RELLDDTDSRVAYYSSAFLLKA 180
            GNHP          +L L+  C                RELLDDTDSRVAYYSSAFLLK 
Sbjct: 1092 GNHPGAASDIRSALLLLLIAKCSSDSSAFQEVDGEQFFRELLDDTDSRVAYYSSAFLLK- 1151

Query: 181  RKFLSTAKMNFFYFQRMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLAN 224
                           RMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLAN
Sbjct: 1152 ---------------RMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLAN 1201

[Close]

BLAST of Carg18319 vs. NCBI nr
Match: KAG6600050.1 (hypothetical protein SDJN03_05283, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 362.5 bits (929), Expect = 2.7e-96
Identity = 199/246 (80.89%), Postives = 201/246 (81.71%), Query Frame = 0


Query: 1    MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN 60
            MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN
Sbjct: 972  MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN 1031

Query: 61   NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR 120
            NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR
Sbjct: 1032 NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR 1091

Query: 121  GNHPDPD-------MLTLLGFC----------------RELLDDTDSRVAYYSSAFLLKA 180
            GNHP          +L L+  C                RELLDDTDSRVAYYSSAFLLK 
Sbjct: 1092 GNHPGAASDIRSALLLLLIAKCSSDSSAFQEVDGEQFFRELLDDTDSRVAYYSSAFLLK- 1151

Query: 181  RKFLSTAKMNFFYFQRMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLAN 224
                           RMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLAN
Sbjct: 1152 ---------------RMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLAN 1201

[Close]

BLAST of Carg18319 vs. ExPASy TrEMBL
Match: A0A6J1ILW0 (uncharacterized protein LOC111476453 OS=Cucurbita maxima OX=3661 GN=LOC111476453 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.8e-99
Identity = 200/243 (82.30%), Postives = 201/243 (82.72%), Query Frame = 0


Query: 1    MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN 60
            MCDILFSQLCLRVPQVSDLPIGDDMPRG+VMDYSGESKTIGVTESEAKLEEKSRFIKTYN
Sbjct: 972  MCDILFSQLCLRVPQVSDLPIGDDMPRGKVMDYSGESKTIGVTESEAKLEEKSRFIKTYN 1031

Query: 61   NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR 120
            NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR
Sbjct: 1032 NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR 1091

Query: 121  GNHP--------------------DPDMLTLLGFCRELLDDTDSRVAYYSSAFLLKARKF 180
            GNHP                    D      LGFCRELLDDTDSRVAYYSSAFLLK    
Sbjct: 1092 GNHPGAASDIRSALLLLLIAKCSSDSSAFXPLGFCRELLDDTDSRVAYYSSAFLLK---- 1151

Query: 181  LSTAKMNFFYFQRMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLANDMG 224
                        RMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLANDMG
Sbjct: 1152 ------------RMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLANDMG 1198

[Close]

BLAST of Carg18319 vs. ExPASy TrEMBL
Match: A0A6J1FQQ7 (uncharacterized protein LOC111447349 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447349 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.3e-96
Identity = 199/246 (80.89%), Postives = 201/246 (81.71%), Query Frame = 0


Query: 1    MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN 60
            MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN
Sbjct: 972  MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN 1031

Query: 61   NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR 120
            NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR
Sbjct: 1032 NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR 1091

Query: 121  GNHPDPD-------MLTLLGFC----------------RELLDDTDSRVAYYSSAFLLKA 180
            GNHP          +L L+  C                RELLDDTDSRVAYYSSAFLLK 
Sbjct: 1092 GNHPGAASDIRSALLLLLIAKCSSDSSAFQEVDGEQFFRELLDDTDSRVAYYSSAFLLK- 1151

Query: 181  RKFLSTAKMNFFYFQRMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLAN 224
                           RMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLAN
Sbjct: 1152 ---------------RMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLAN 1201

[Close]

BLAST of Carg18319 vs. ExPASy TrEMBL
Match: A0A6J1FPP3 (uncharacterized protein LOC111447349 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447349 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.3e-96
Identity = 199/246 (80.89%), Postives = 201/246 (81.71%), Query Frame = 0


Query: 1    MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN 60
            MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN
Sbjct: 889  MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKLEEKSRFIKTYN 948

Query: 61   NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR 120
            NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR
Sbjct: 949  NPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQAR 1008

Query: 121  GNHPDPD-------MLTLLGFC----------------RELLDDTDSRVAYYSSAFLLKA 180
            GNHP          +L L+  C                RELLDDTDSRVAYYSSAFLLK 
Sbjct: 1009 GNHPGAASDIRSALLLLLIAKCSSDSSAFQEVDGEQFFRELLDDTDSRVAYYSSAFLLK- 1068

Query: 181  RKFLSTAKMNFFYFQRMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLAN 224
                           RMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLAN
Sbjct: 1069 ---------------RMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLAN 1118

[Close]

BLAST of Carg18319 vs. ExPASy TrEMBL
Match: A0A1S4E3E3 (uncharacterized protein LOC103500216 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500216 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 7.6e-89
Identity = 188/255 (73.73%), Postives = 195/255 (76.47%), Query Frame = 0


Query: 1    MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKL---------EE 60
            MCDILFSQLCLRVPQ SDLPIGDD+P GRV+DYSGESKT GV ESEAKL         EE
Sbjct: 972  MCDILFSQLCLRVPQASDLPIGDDLPHGRVIDYSGESKTTGVFESEAKLDGNFFGELKEE 1031

Query: 61   KSRFIKTYNNPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIAL 120
            K R+ KTYNNPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIAL
Sbjct: 1032 KGRYSKTYNNPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIAL 1091

Query: 121  GVAVGSQARGNHPDPD-------MLTLLGFC----------------RELLDDTDSRVAY 180
            GVAVGSQARGNHP          +L L+  C                RELLDDTDSRVAY
Sbjct: 1092 GVAVGSQARGNHPGAASDIRSALLLLLIAKCSSDSCAFQEVDGEQFFRELLDDTDSRVAY 1151

Query: 181  YSSAFLLKARKFLSTAKMNFFYFQRMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQ 224
            YSSAFLLK                RMMTEKPEKYQ+MLQNLVIKAQQSNNEKLLENPYLQ
Sbjct: 1152 YSSAFLLK----------------RMMTEKPEKYQHMLQNLVIKAQQSNNEKLLENPYLQ 1210

[Close]

BLAST of Carg18319 vs. ExPASy TrEMBL
Match: A0A1S4E3E2 (uncharacterized protein LOC103500216 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500216 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 7.6e-89
Identity = 188/255 (73.73%), Postives = 195/255 (76.47%), Query Frame = 0


Query: 1    MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYSGESKTIGVTESEAKL---------EE 60
            MCDILFSQLCLRVPQ SDLPIGDD+P GRV+DYSGESKT GV ESEAKL         EE
Sbjct: 846  MCDILFSQLCLRVPQASDLPIGDDLPHGRVIDYSGESKTTGVFESEAKLDGNFFGELKEE 905

Query: 61   KSRFIKTYNNPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIAL 120
            K R+ KTYNNPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIAL
Sbjct: 906  KGRYSKTYNNPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIAL 965

Query: 121  GVAVGSQARGNHPDPD-------MLTLLGFC----------------RELLDDTDSRVAY 180
            GVAVGSQARGNHP          +L L+  C                RELLDDTDSRVAY
Sbjct: 966  GVAVGSQARGNHPGAASDIRSALLLLLIAKCSSDSCAFQEVDGEQFFRELLDDTDSRVAY 1025

Query: 181  YSSAFLLKARKFLSTAKMNFFYFQRMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQ 224
            YSSAFLLK                RMMTEKPEKYQ+MLQNLVIKAQQSNNEKLLENPYLQ
Sbjct: 1026 YSSAFLLK----------------RMMTEKPEKYQHMLQNLVIKAQQSNNEKLLENPYLQ 1084

[Close]

BLAST of Carg18319 vs. TAIR 10
Match: AT3G12590.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 50 Blast hits to 41 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 211.5 bits (537), Expect = 7.1e-55
Identity = 133/243 (54.73%), Postives = 152/243 (62.55%), Query Frame = 0


Query: 1    MCDILFSQLCLRVPQVSDLPIGDDMPRGRVMDYS-GESKTIGVTESEAKLEEKSRFIKTY 60
            MCDILFSQLCL+V    +  + +   R    D S   S    V E + K    +  + T 
Sbjct: 964  MCDILFSQLCLKVLSTDEDAVPNSADRNSKFDTSHRNSYKESVDEGDTKPRYNNVSVSTC 1023

Query: 61   NNPLDHETASMAALLLQGQTIVPMQLISHVPAALFYWPLIQLAGAATDNIALGVAVGSQA 120
                  ETASMAA+LL+GQ IVPMQL++ VPAALFYWPLIQLAGAATDNIALGVAVGS+ 
Sbjct: 1024 ------ETASMAAMLLRGQAIVPMQLVARVPAALFYWPLIQLAGAATDNIALGVAVGSKG 1083

Query: 121  RGNHPDPD-------MLTLLGFC----------------RELLDDTDSRVAYYSSAFLLK 180
            RGN P          +L L+G C                RELLDDTDSRVAYYSSAFLLK
Sbjct: 1084 RGNIPGATSDIRATLLLLLIGKCTADTVAFQEVGGEEFFRELLDDTDSRVAYYSSAFLLK 1143

Query: 181  ARKFLSTAKMNFFYFQRMMTEKPEKYQYMLQNLVIKAQQSNNEKLLENPYLQMRGILKLA 220
                            RMMTE+PEKYQ MLQ LV KAQQSNNEKLLENPYLQM GIL+L+
Sbjct: 1144 ----------------RMMTEEPEKYQNMLQKLVFKAQQSNNEKLLENPYLQMCGILQLS 1184

The following BLAST results are available for this feature:

BLAST of Carg18319 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030721.1	1.7e-119	100.00	hypothetical protein SDJN02_04758, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022975884.1	5.8e-99	82.30	uncharacterized protein LOC111476453 [Cucurbita maxima]	[more]
XP_022942242.1	2.7e-96	80.89	uncharacterized protein LOC111447349 isoform X2 [Cucurbita moschata]	[more]
XP_022942239.1	2.7e-96	80.89	uncharacterized protein LOC111447349 isoform X1 [Cucurbita moschata] >XP_0229422...	[more]
KAG6600050.1	2.7e-96	80.89	hypothetical protein SDJN03_05283, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Carg18319 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg18319 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ILW0	2.8e-99	82.30	uncharacterized protein LOC111476453 OS=Cucurbita maxima OX=3661 GN=LOC111476453...	[more]
A0A6J1FQQ7	1.3e-96	80.89	uncharacterized protein LOC111447349 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FPP3	1.3e-96	80.89	uncharacterized protein LOC111447349 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S4E3E3	7.6e-89	73.73	uncharacterized protein LOC103500216 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E3E2	7.6e-89	73.73	uncharacterized protein LOC103500216 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Carg18319 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12590.1	7.1e-55	54.73	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34958	CONDITIONAL LOSS-OF-GROWTH 1	coord: 133..221 coord: 1..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18319-RA	Carg18319-RA	mRNA