Carg18305 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18305
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	B3 domain-containing transcription factor FUS3
Location	Carg_Chr04: 17723333 .. 17724311 (-)
RNA-Seq Expression	Carg18305
Synteny	Carg18305

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAATTGATCCAAGAAGGCTGAAGTTTCTTTTTCAGAAGGAGCTGAAGAACAGTGATGTTAGCTCTCTTAGGAGAATGATACTCCCAAAGGTGTTGATGAACAAAATTATAATATGCTTTTTAATTAATTAATTAATTAATTAATTAATTAATTAATTACTTAATTAATAACTAATTAACACAAATTATTTCTCAGAAAGCAGCTGAAACTCACCTCCCAACTTTGGAGTCTAAAGAAGGAATCATCATCACCATGGATGACTTGGATGGAGTCCATGTTTGGAACTTTAAATATAGGTTCGGTTCGGCTCGGTTCCGTTCCGTTCGGTTTGGTTTTGTATGTATAATTATGTTTTTAAAATGGTTGAATTTTGCAGGTTTTGGCCGAATAACAATAGTAGAATGTACGTACTTGAAAACACGGGTAAGCTCTCCTCAAAATCGTTATCAAACAGGGTTTAGTTTCTGTTCACGTTATGATCTAACATAGATATCGTAATTTTGACATTGAGTTGTCGCAGGGGACTTCGTCAACGCCCATGGCATACAACTAGGAGATTTCATCTTGGTTTACCAAGATTTTGAAGATCATAGCTATGTAAGCTAGTTTCGTTTTGTTTCCAATACGATAATCTTCGTAACACTTAGTATTTGTGTTAATCTCTAATTAATTTTATAGGTCATTCAAGCAAAAAAGGCGTCCGATCCAGAAATATATTCCGACATAGCAAATAGTTGCGTTATGAATGGCGATATTGTGTTTCAAGACTTCAATGCTACCAAAGCTGCTAACTCTATGTACGTGCCTAGTTCAACTATGGACGATCCCGTGTCATCGTTTATCTACGATACTAGCTCAGCTTTCGATAACGATTCGTCGTTTGACTTTATGAGTAGCTCAATGACCAACTACTCGAGAATGGGAGGTATCGAAGGGTTTGGATCAGTCGAGAACTTGTCGCTCGATGACTTCTACTAA

mRNA sequence

GTAATTGATCCAAGAAGGCTGAAGTTTCTTTTTCAGAAGGAGCTGAAGAACAGTGATGTTAGCTCTCTTAGGAGAATGATACTCCCAAAGAAAGCAGCTGAAACTCACCTCCCAACTTTGGAGTCTAAAGAAGGAATCATCATCACCATGGATGACTTGGATGGAGTCCATGTTTGGAACTTTAAATATAGGTTTTGGCCGAATAACAATAGTAGAATGTACGTACTTGAAAACACGGGGGACTTCGTCAACGCCCATGGCATACAACTAGGAGATTTCATCTTGGTTTACCAAGATTTTGAAGATCATAGCTATGTCATTCAAGCAAAAAAGGCGTCCGATCCAGAAATATATTCCGACATAGCAAATAGTTGCGTTATGAATGGCGATATTGTGTTTCAAGACTTCAATGCTACCAAAGCTGCTAACTCTATGTACGTGCCTAGTTCAACTATGGACGATCCCGTGTCATCGTTTATCTACGATACTAGCTCAGCTTTCGATAACGATTCGTCGTTTGACTTTATGAGTAGCTCAATGACCAACTACTCGAGAATGGGAGGTATCGAAGGGTTTGGATCAGTCGAGAACTTGTCGCTCGATGACTTCTACTAA

Coding sequence (CDS)

GTAATTGATCCAAGAAGGCTGAAGTTTCTTTTTCAGAAGGAGCTGAAGAACAGTGATGTTAGCTCTCTTAGGAGAATGATACTCCCAAAGAAAGCAGCTGAAACTCACCTCCCAACTTTGGAGTCTAAAGAAGGAATCATCATCACCATGGATGACTTGGATGGAGTCCATGTTTGGAACTTTAAATATAGGTTTTGGCCGAATAACAATAGTAGAATGTACGTACTTGAAAACACGGGGGACTTCGTCAACGCCCATGGCATACAACTAGGAGATTTCATCTTGGTTTACCAAGATTTTGAAGATCATAGCTATGTCATTCAAGCAAAAAAGGCGTCCGATCCAGAAATATATTCCGACATAGCAAATAGTTGCGTTATGAATGGCGATATTGTGTTTCAAGACTTCAATGCTACCAAAGCTGCTAACTCTATGTACGTGCCTAGTTCAACTATGGACGATCCCGTGTCATCGTTTATCTACGATACTAGCTCAGCTTTCGATAACGATTCGTCGTTTGACTTTATGAGTAGCTCAATGACCAACTACTCGAGAATGGGAGGTATCGAAGGGTTTGGATCAGTCGAGAACTTGTCGCTCGATGACTTCTACTAA

Protein sequence

VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNFKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSDIANSCVMNGDIVFQDFNATKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSMTNYSRMGGIEGFGSVENLSLDDFY

Homology

[Close]

BLAST of Carg18305 vs. NCBI nr
Match: KAG7032690.1 (B3 domain-containing transcription factor FUS3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 409.8 bits (1052), Expect = 1.3e-110
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN 60
           VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN
Sbjct: 1   VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN 60

Query: 61  FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD 120
           FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD
Sbjct: 61  FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD 120

Query: 121 IANSCVMNGDIVFQDFNATKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSM 180
           IANSCVMNGDIVFQDFNATKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSM
Sbjct: 121 IANSCVMNGDIVFQDFNATKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSM 180

Query: 181 TNYSRMGGIEGFGSVENLSLDDFY 205
           TNYSRMGGIEGFGSVENLSLDDFY
Sbjct: 181 TNYSRMGGIEGFGSVENLSLDDFY 204

[Close]

BLAST of Carg18305 vs. NCBI nr
Match: XP_022962310.1 (B3 domain-containing transcription factor FUS3-like isoform X1 [Cucurbita moschata] >XP_023549049.1 B3 domain-containing transcription factor FUS3-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 408.3 bits (1048), Expect = 3.9e-110
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN 60
           VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN
Sbjct: 72  VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN 131

Query: 61  FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD 120
           FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD
Sbjct: 132 FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD 191

Query: 121 IANSCVMNGDIVFQDFNATKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSM 180
           IANSCVMNGDIVFQDFNA+KAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSM
Sbjct: 192 IANSCVMNGDIVFQDFNASKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSM 251

Query: 181 TNYSRMGGIEGFGSVENLSLDDFY 205
           TNYSRMGGIEGFGSVENLSLDDFY
Sbjct: 252 TNYSRMGGIEGFGSVENLSLDDFY 275

[Close]

BLAST of Carg18305 vs. NCBI nr
Match: XP_022990186.1 (B3 domain-containing transcription factor FUS3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 404.8 bits (1039), Expect = 4.3e-109
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN 60
           VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN
Sbjct: 71  VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN 130

Query: 61  FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD 120
           FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD
Sbjct: 131 FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD 190

Query: 121 IANSCVMNGDIVFQDFNATKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSM 180
           IANSCVMNGDIVFQDFNA+KAANSMYVPSSTMDDPVSSFIYDTSSAFDNDS FDFMSSSM
Sbjct: 191 IANSCVMNGDIVFQDFNASKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSPFDFMSSSM 250

Query: 181 TNYSRMGGIEGFGSVENLSLDDFY 205
           TNYSR+GGIEGFGSVENLSLDDFY
Sbjct: 251 TNYSRVGGIEGFGSVENLSLDDFY 274

[Close]

BLAST of Carg18305 vs. NCBI nr
Match: XP_022962319.1 (B3 domain-containing transcription factor FUS3-like isoform X2 [Cucurbita moschata] >XP_023549057.1 B3 domain-containing transcription factor FUS3-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 385.6 bits (989), Expect = 2.7e-103
Identity = 191/193 (98.96%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 12  QKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNFKYRFWPNNNS 71
           +KELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNFKYRFWPNNNS
Sbjct: 71  RKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNFKYRFWPNNNS 130

Query: 72  RMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSDIANSCVMNGDI 131
           RMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSDIANSCVMNGDI
Sbjct: 131 RMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSDIANSCVMNGDI 190

Query: 132 VFQDFNATKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSMTNYSRMGGIEG 191
           VFQDFNA+KAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSMTNYSRMGGIEG
Sbjct: 191 VFQDFNASKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSMTNYSRMGGIEG 250

Query: 192 FGSVENLSLDDFY 205
           FGSVENLSLDDFY
Sbjct: 251 FGSVENLSLDDFY 263

[Close]

BLAST of Carg18305 vs. NCBI nr
Match: KAG6601992.1 (B3 domain-containing transcription factor FUS3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 384.0 bits (985), Expect = 7.9e-103
Identity = 192/196 (97.96%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 1   VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN 60
           VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN
Sbjct: 72  VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN 131

Query: 61  FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD 120
           FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD
Sbjct: 132 FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD 191

Query: 121 IANSCVMNGDIVFQDFNATKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSM 180
           IANSCVMNGDIVFQDFNATKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSM
Sbjct: 192 IANSCVMNGDIVFQDFNATKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSM 251

Query: 181 TNYSRMGGIEGFGSVE 197
           TNYSRMGGIEG  S +
Sbjct: 252 TNYSRMGGIEGARSFQ 267

[Close]

BLAST of Carg18305 vs. ExPASy Swiss-Prot
Match: Q9LW31 (B3 domain-containing transcription factor FUS3 OS=Arabidopsis thaliana OX=3702 GN=FUS3 PE=1 SV=2)

HSP 1 Score: 239.6 bits (610), Expect = 3.1e-62
Identity = 133/234 (56.84%), Postives = 161/234 (68.80%), Query Frame = 0


Query: 2   IDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNF 61
           IDPR+L+FLFQKELKNSDVSSLRRMILPKKAAE HLP LE KEGI I M+DLDG HVW F
Sbjct: 83  IDPRKLRFLFQKELKNSDVSSLRRMILPKKAAEAHLPALECKEGIPIRMEDLDGFHVWTF 142

Query: 62  KYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPE----- 121
           KYR+WPNNNSRMYVLENTGDFVNAHG+QLGDFI+VYQD   ++YVIQA+KAS+ E     
Sbjct: 143 KYRYWPNNNSRMYVLENTGDFVNAHGLQLGDFIMVYQDLYSNNYVIQARKASEEEEVDVI 202

Query: 122 ------IYSDIA--NSCVMNGDIVFQDFNATKAAN-----------SMYVPSSTMDDPVS 181
                 +Y+++    + V+N D++ QDFN     N           S Y P   +DD  +
Sbjct: 203 NLEEDDVYTNLTRIENTVVN-DLLLQDFNHHNNNNNNNSNSNSNKCSYYYP--VIDDVTT 262

Query: 182 ---SFIYDTSSAFDNDSSFDFMSSSMTN----YSRMGGIEGFGSVENLSLDDFY 205
              SF+YDT++   ND+  DF+    T     YS+ G  +G GSVEN+SLDDFY
Sbjct: 263 NTESFVYDTTALTSNDTPLDFLGGHTTTTNNYYSKFGTFDGLGSVENISLDDFY 313

[Close]

BLAST of Carg18305 vs. ExPASy Swiss-Prot
Match: Q01593 (B3 domain-containing transcription factor ABI3 OS=Arabidopsis thaliana OX=3702 GN=ABI3 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.4e-32
Identity = 62/111 (55.86%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 5   RRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNFKYR 64
           + L+FL QK LK SDV +L R++LPKK AETHLP LE+++GI + M+D+    VWN +YR
Sbjct: 566 KNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISLAMEDIGTSRVWNMRYR 625

Query: 65  FWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDP 116
           FWPNN SRMY+LENTGDFV  +G+Q GDFI++Y D +   Y+I+  K   P
Sbjct: 626 FWPNNKSRMYLLENTGDFVKTNGLQEGDFIVIYSDVKCGKYLIRGVKVRQP 676

[Close]

BLAST of Carg18305 vs. ExPASy Swiss-Prot
Match: P26307 (Regulatory protein viviparous-1 OS=Zea mays OX=4577 GN=VP1 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.9e-30
Identity = 60/111 (54.05%), Postives = 81/111 (72.97%), Query Frame = 0


Query: 5   RRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNFKYR 64
           + L+FL QK LK SDV SL R++LPKK AE HLP L++++GI I M+D+    VWN +YR
Sbjct: 511 KNLRFLLQKVLKQSDVGSLGRIVLPKKEAEVHLPELKTRDGISIPMEDIGTSRVWNMRYR 570

Query: 65  FWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDP 116
           FWPNN SRMY+LENTG+FV ++ +Q GDFI++Y D +   Y+I+  K   P
Sbjct: 571 FWPNNKSRMYLLENTGEFVRSNELQEGDFIVIYSDVKSGKYLIRGVKVRPP 621

[Close]

BLAST of Carg18305 vs. ExPASy Swiss-Prot
Match: A4LBC0 (B3 domain-containing protein LFL1 OS=Oryza sativa subsp. japonica OX=39947 GN=LFL1 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.4e-30
Identity = 63/111 (56.76%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 7   LKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEG-IIITMDDLDGVHVWNFKYRF 66
           L+ + QKEL+ SDVS L R++LPKK AE +LP L SK+G   + M DL    +W FKYR+
Sbjct: 177 LRVILQKELRYSDVSQLGRIVLPKKEAEAYLPILTSKDGKKSLCMHDLQNAQLWTFKYRY 236

Query: 67  WPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPE 117
           WPNN SRMYVLENTGD+V  H +QLGD I++Y+D E++ +VI AKKA D +
Sbjct: 237 WPNNKSRMYVLENTGDYVRTHDLQLGDSIVIYKDDENNRFVIGAKKAGDQQ 287

[Close]

BLAST of Carg18305 vs. ExPASy Swiss-Prot
Match: Q7XKC5 (B3 domain-containing protein Os04g0676600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0676600 PE=2 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-29
Identity = 57/124 (45.97%), Postives = 80/124 (64.52%), Query Frame = 0


Query: 5   RRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNFKYR 64
           R  + + +KEL NSDV ++ R+++PK+ AE HLP L  +EG+++ MDD      WNFKYR
Sbjct: 291 REYRVILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQREGVMLKMDDFKLETTWNFKYR 350

Query: 65  FWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSDIANS 124
           FWPNN SRMYVLE+TG FV  HG+Q GD  ++Y+  E    V++ +KA  P +   I + 
Sbjct: 351 FWPNNKSRMYVLESTGGFVKQHGLQTGDIFIIYKSSESEKLVVRGEKAIKPNVIMPIVDC 410

Query: 125 CVMN 129
              N
Sbjct: 411 SCKN 414

[Close]

BLAST of Carg18305 vs. ExPASy TrEMBL
Match: A0A6J1HEP2 (B3 domain-containing transcription factor FUS3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462796 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.9e-110
Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN 60
           VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN
Sbjct: 72  VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN 131

Query: 61  FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD 120
           FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD
Sbjct: 132 FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD 191

Query: 121 IANSCVMNGDIVFQDFNATKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSM 180
           IANSCVMNGDIVFQDFNA+KAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSM
Sbjct: 192 IANSCVMNGDIVFQDFNASKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSM 251

Query: 181 TNYSRMGGIEGFGSVENLSLDDFY 205
           TNYSRMGGIEGFGSVENLSLDDFY
Sbjct: 252 TNYSRMGGIEGFGSVENLSLDDFY 275

[Close]

BLAST of Carg18305 vs. ExPASy TrEMBL
Match: A0A6J1JM90 (B3 domain-containing transcription factor FUS3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487156 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.1e-109
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN 60
           VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN
Sbjct: 71  VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN 130

Query: 61  FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD 120
           FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD
Sbjct: 131 FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD 190

Query: 121 IANSCVMNGDIVFQDFNATKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSM 180
           IANSCVMNGDIVFQDFNA+KAANSMYVPSSTMDDPVSSFIYDTSSAFDNDS FDFMSSSM
Sbjct: 191 IANSCVMNGDIVFQDFNASKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSPFDFMSSSM 250

Query: 181 TNYSRMGGIEGFGSVENLSLDDFY 205
           TNYSR+GGIEGFGSVENLSLDDFY
Sbjct: 251 TNYSRVGGIEGFGSVENLSLDDFY 274

[Close]

BLAST of Carg18305 vs. ExPASy TrEMBL
Match: A0A6J1HGR1 (B3 domain-containing transcription factor FUS3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462796 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103
Identity = 191/193 (98.96%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 12  QKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNFKYRFWPNNNS 71
           +KELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNFKYRFWPNNNS
Sbjct: 71  RKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNFKYRFWPNNNS 130

Query: 72  RMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSDIANSCVMNGDI 131
           RMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSDIANSCVMNGDI
Sbjct: 131 RMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSDIANSCVMNGDI 190

Query: 132 VFQDFNATKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSMTNYSRMGGIEG 191
           VFQDFNA+KAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSMTNYSRMGGIEG
Sbjct: 191 VFQDFNASKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSMTNYSRMGGIEG 250

Query: 192 FGSVENLSLDDFY 205
           FGSVENLSLDDFY
Sbjct: 251 FGSVENLSLDDFY 263

[Close]

BLAST of Carg18305 vs. ExPASy TrEMBL
Match: A0A6J1JHZ3 (B3 domain-containing transcription factor FUS3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487156 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.5e-102
Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 12  QKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNFKYRFWPNNNS 71
           +KELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNFKYRFWPNNNS
Sbjct: 70  RKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNFKYRFWPNNNS 129

Query: 72  RMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSDIANSCVMNGDI 131
           RMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSDIANSCVMNGDI
Sbjct: 130 RMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSDIANSCVMNGDI 189

Query: 132 VFQDFNATKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSSMTNYSRMGGIEG 191
           VFQDFNA+KAANSMYVPSSTMDDPVSSFIYDTSSAFDNDS FDFMSSSMTNYSR+GGIEG
Sbjct: 190 VFQDFNASKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSPFDFMSSSMTNYSRVGGIEG 249

Query: 192 FGSVENLSLDDFY 205
           FGSVENLSLDDFY
Sbjct: 250 FGSVENLSLDDFY 262

[Close]

BLAST of Carg18305 vs. ExPASy TrEMBL
Match: A0A1S4E607 (B3 domain-containing transcription factor FUS3 OS=Cucumis melo OX=3656 GN=LOC103504182 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.1e-93
Identity = 172/205 (83.90%), Postives = 190/205 (92.68%), Query Frame = 0


Query: 1   VIDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWN 60
           VIDPR+LKFLFQKELKNSDVSSLRRMILPKKAAETHLP LESKEG++ITMDDLDGVHVWN
Sbjct: 1   VIDPRKLKFLFQKELKNSDVSSLRRMILPKKAAETHLPALESKEGMMITMDDLDGVHVWN 60

Query: 61  FKYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPEIYSD 120
           FKYRFWPNNNSRMYVLENTGDFVNAH + LGDFI++YQD E+H+YVIQAKKAS+ EIYSD
Sbjct: 61  FKYRFWPNNNSRMYVLENTGDFVNAHALHLGDFIMIYQDCEEHNYVIQAKKASEQEIYSD 120

Query: 121 I-ANSCVMNGDIVFQDFNATKAANSMYVPSSTMDDPVSSFIYDTSSAFDNDSSFDFMSSS 180
           I  N  V+N DIVFQD++A+KAA+S+YVPS TM+ PVSSFIYDTS AFDNDS FDFM+ S
Sbjct: 121 ITTNDVVINEDIVFQDYDASKAASSIYVPSPTMEHPVSSFIYDTSCAFDNDSPFDFMTGS 180

Query: 181 MTNYSRMGGIEGFGSVENLSLDDFY 205
           MTNYSRMGG+EGFGSVENLSLDDFY
Sbjct: 181 MTNYSRMGGLEGFGSVENLSLDDFY 205

[Close]

BLAST of Carg18305 vs. TAIR 10
Match: AT3G26790.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 239.6 bits (610), Expect = 2.2e-63
Identity = 133/234 (56.84%), Postives = 161/234 (68.80%), Query Frame = 0


Query: 2   IDPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNF 61
           IDPR+L+FLFQKELKNSDVSSLRRMILPKKAAE HLP LE KEGI I M+DLDG HVW F
Sbjct: 83  IDPRKLRFLFQKELKNSDVSSLRRMILPKKAAEAHLPALECKEGIPIRMEDLDGFHVWTF 142

Query: 62  KYRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDPE----- 121
           KYR+WPNNNSRMYVLENTGDFVNAHG+QLGDFI+VYQD   ++YVIQA+KAS+ E     
Sbjct: 143 KYRYWPNNNSRMYVLENTGDFVNAHGLQLGDFIMVYQDLYSNNYVIQARKASEEEEVDVI 202

Query: 122 ------IYSDIA--NSCVMNGDIVFQDFNATKAAN-----------SMYVPSSTMDDPVS 181
                 +Y+++    + V+N D++ QDFN     N           S Y P   +DD  +
Sbjct: 203 NLEEDDVYTNLTRIENTVVN-DLLLQDFNHHNNNNNNNSNSNSNKCSYYYP--VIDDVTT 262

Query: 182 ---SFIYDTSSAFDNDSSFDFMSSSMTN----YSRMGGIEGFGSVENLSLDDFY 205
              SF+YDT++   ND+  DF+    T     YS+ G  +G GSVEN+SLDDFY
Sbjct: 263 NTESFVYDTTALTSNDTPLDFLGGHTTTTNNYYSKFGTFDGLGSVENISLDDFY 313

[Close]

BLAST of Carg18305 vs. TAIR 10
Match: AT3G24650.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 139.4 bits (350), Expect = 3.2e-33
Identity = 62/111 (55.86%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 5   RRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNFKYR 64
           + L+FL QK LK SDV +L R++LPKK AETHLP LE+++GI + M+D+    VWN +YR
Sbjct: 566 KNLRFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISLAMEDIGTSRVWNMRYR 625

Query: 65  FWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASDP 116
           FWPNN SRMY+LENTGDFV  +G+Q GDFI++Y D +   Y+I+  K   P
Sbjct: 626 FWPNNKSRMYLLENTGDFVKTNGLQEGDFIVIYSDVKCGKYLIRGVKVRQP 676

[Close]

BLAST of Carg18305 vs. TAIR 10
Match: AT1G28300.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 125.2 bits (313), Expect = 6.1e-29
Identity = 55/103 (53.40%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 3   DPRRLKFLFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNFK 62
           D ++L+ L +KELKNSDV SL R++LPK+ AE +LP L  KEGI++ M D+  +  W+FK
Sbjct: 163 DNKKLRVLCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDKEGIVVQMRDVFSMQSWSFK 222

Query: 63  YRFWPNNNSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSY 106
           Y+FW NN SRMYVLENTG+FV  +G ++GDF+ +Y+D   + Y
Sbjct: 223 YKFWSNNKSRMYVLENTGEFVKQNGAEIGDFLTIYEDESKNLY 265

[Close]

BLAST of Carg18305 vs. TAIR 10
Match: AT2G30470.1 (high-level expression of sugar-inducible gene 2 )

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-15
Identity = 38/105 (36.19%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 10  LFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNFKYRFWPNN 69
           LF+K L  SD   + R++LPK  AE + P +   EGI + + D+ G   W F++R+WPNN
Sbjct: 294 LFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQDVRG-REWTFQFRYWPNN 353

Query: 70  NSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASD 115
           NSRMYVLE     + +  +Q GD +   +       ++ ++KA++
Sbjct: 354 NSRMYVLEGVTPCIQSMMLQAGDTVTFSRVDPGGKLIMGSRKAAN 397

[Close]

BLAST of Carg18305 vs. TAIR 10
Match: AT4G32010.1 (HSI2-like 1 )

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-15
Identity = 39/105 (37.14%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 10  LFQKELKNSDVSSLRRMILPKKAAETHLPTLESKEGIIITMDDLDGVHVWNFKYRFWPNN 69
           LF+K L  SD   + R++LPK  AE + P +   EG+ + + D+ G   W F++RFWPNN
Sbjct: 285 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISLPEGLPLKIQDIKGKE-WVFQFRFWPNN 344

Query: 70  NSRMYVLENTGDFVNAHGIQLGDFILVYQDFEDHSYVIQAKKASD 115
           NSRMYVLE     + +  +Q GD +   +   +   V+  +KA++
Sbjct: 345 NSRMYVLEGVTPCIQSMQLQAGDTVTFSRTEPEGKLVMGYRKATN 388

The following BLAST results are available for this feature:

BLAST of Carg18305 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032690.1	1.3e-110	100.00	B3 domain-containing transcription factor FUS3, partial [Cucurbita argyrosperma ...	[more]
XP_022962310.1	3.9e-110	99.51	B3 domain-containing transcription factor FUS3-like isoform X1 [Cucurbita moscha...	[more]
XP_022990186.1	4.3e-109	98.53	B3 domain-containing transcription factor FUS3-like isoform X1 [Cucurbita maxima...	[more]
XP_022962319.1	2.7e-103	98.96	B3 domain-containing transcription factor FUS3-like isoform X2 [Cucurbita moscha...	[more]
KAG6601992.1	7.9e-103	97.96	B3 domain-containing transcription factor FUS3, partial [Cucurbita argyrosperma ...	[more]

BLAST of Carg18305 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW31	3.1e-62	56.84	B3 domain-containing transcription factor FUS3 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q01593	4.4e-32	55.86	B3 domain-containing transcription factor ABI3 OS=Arabidopsis thaliana OX=3702 G...	[more]
P26307	1.9e-30	54.05	Regulatory protein viviparous-1 OS=Zea mays OX=4577 GN=VP1 PE=2 SV=1	[more]
A4LBC0	2.4e-30	56.76	B3 domain-containing protein LFL1 OS=Oryza sativa subsp. japonica OX=39947 GN=LF...	[more]
Q7XKC5	1.2e-29	45.97	B3 domain-containing protein Os04g0676600 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of Carg18305 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HEP2	1.9e-110	99.51	B3 domain-containing transcription factor FUS3-like isoform X1 OS=Cucurbita mosc...	[more]
A0A6J1JM90	2.1e-109	98.53	B3 domain-containing transcription factor FUS3-like isoform X1 OS=Cucurbita maxi...	[more]
A0A6J1HGR1	1.3e-103	98.96	B3 domain-containing transcription factor FUS3-like isoform X2 OS=Cucurbita mosc...	[more]
A0A6J1JHZ3	1.5e-102	97.93	B3 domain-containing transcription factor FUS3-like isoform X2 OS=Cucurbita maxi...	[more]
A0A1S4E607	6.1e-93	83.90	B3 domain-containing transcription factor FUS3 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Carg18305 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26790.1	2.2e-63	56.84	AP2/B3-like transcriptional factor family protein	[more]
AT3G24650.1	3.2e-33	55.86	AP2/B3-like transcriptional factor family protein	[more]
AT1G28300.1	6.1e-29	53.40	AP2/B3-like transcriptional factor family protein	[more]
AT2G30470.1	1.3e-15	36.19	high-level expression of sugar-inducible gene 2	[more]
AT4G32010.1	1.3e-15	37.14	HSI2-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 11..113 e-value: 2.6E-19 score: 80.1
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 11..109 e-value: 2.5E-17 score: 62.6
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 11..113 score: 9.798372
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 9..111 e-value: 1.72609E-26 score: 95.4724
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 7..124 e-value: 1.5E-36 score: 126.9
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 9..106
None	No IPR available	PANTHER	PTHR31140:SF73	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3	coord: 2..204
IPR044800	B3 domain-containing transcription factor LEC2-like	PANTHER	PTHR31140	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3	coord: 2..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18305-RA	Carg18305-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010373	negative regulation of gibberellin biosynthetic process
biological_process	GO:0099402	plant organ development
biological_process	GO:0009789	positive regulation of abscisic acid-activated signaling pathway
biological_process	GO:0010116	positive regulation of abscisic acid biosynthetic process
biological_process	GO:0008284	positive regulation of cell population proliferation
biological_process	GO:0045995	regulation of embryonic development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009733	response to auxin
biological_process	GO:0010262	somatic embryogenesis
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0019900	kinase binding