Carg18263 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18263
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-type E3 ubiquitin transferase
Location	Carg_Chr04: 18032859 .. 18036390 (+)
RNA-Seq Expression	Carg18263
Synteny	Carg18263

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGTTTTCGGTGGGTGGAGAGGAAGACGGGGAGGACGGATCCAGTACCAGTAGCCCTAGGGCGAAGAGGAAGAGAACCTCCTTTCGCATCAACGCCGTCGTTAATTTTCCCCGGCACAACCAACGGTGTGAAGAAGGGGAAGAGCAGGGTTTCGATTACTGTAAGGAAGAAACTGCGAGCGATGAAGAGCAGAGAAAGCGCCATCGAATTGACGGAATAGAGGAACAGGTTGAAGAGGACGGTACCGAAAACGCACTCTGCTCGGTTAAGTCCTGCTCTAGAAATGTGAAGGAAAATGGCTCCATTTCGATGTTTTTGATCGACCCTGAAGTGTTGGATTGTTCCATTTGTTGTGAACCCTTGAGTGTCCCCATCTTCCAGGTATGTTGTTTTCAATAATCTCCGTCCTGGTTCTGTTCGTAATTAGTTGTGATTTTGTAGTTGACTTTGCTCTGATTCCAAATTGGCTTTTCGTTTGGGGGTTTTCCATAAAGATCAGATAGATCCCAAAATTGAGTTGGGTTGGATTTCGTTCGATTGAACCTTTAATCAAATAAGATGAAATGGAAGCCATTAGTAGTTCGTTCGTCTTGTAAAAACTTAAGAACTGCTGGGTTGATATTTAGCAGAAGCGTTGATATCCTCAATAATCTTCTAGTAATTTAATGCATAATCTATGTATACGTGCTCTGTGTGAGGATGAACCAGATAGGTGGAGTATCATTTCTGTACAAATGTGAGGGTCAAGCAACAATCGATGAACCAAATATACCACCATAACAGTTATGGTTGAGAAACGGTACTCGACCTCATGGATGAATGAGAGATCGTTTGTTGCTTCTCAGACAATGAGATAGAACTGGAACTAAGAACACAACTCTGGAATAAAATCACTTATCAAGTGTGTCCACAAGCTGCTGATAATAGGATGGATCATTGAATGGAGGAGATTTGACCTGTAATTGAAGCTGAATTGACATTGGAGTTTCAAAGCGTTTTGCACCAGTCATGCCTGATTTTTCAAGCAATTAGGTTGATGAAGATATACACTAGAAAATGCTGTATGTATTTCAAGCCCAAGAAACTACTTGAGTTGGCCAGGATCAGAAATCTGAATTTCATAGGTTATTCACCCTTCAGAGTACTAATGGAGTGTTTTTTTAAGTGGGAGTGTTTAGTGATTTCAATAAAAATTGGCAGAGAGAAGGAAAGGTTGGATGGGAATTAGAAAGGAGCAACTTGAGGGTTGATGTTCTGAACAAGATGGATGAAAATCCTTAGCAAATGTGGTCAAAGGATTCATGGGATCAAGAACAGTGTGGATAAGGAATTCCAATGGAAAAATGAAGATGAAGAAAAGGATTGCTATTATGAGAGTTGAGTTTGCTAAAATTGATTGGCACGTACCATTGTGGTCAAGAGACCTCAGTTTCATCATGATTCGTTCACCATCGTTGTGGCACTAAGACAGGTGATCTATGAATATTTTATGTGAATCCTTTTGATGCAAAGGAAGCTTTGATTAGAGGAGTTAAGAAAATGGCTTGTACTTGTAAGATTGATGGATTGGCGGATATGAGGAGATTTTAAAGAAGGGGAAAATTTGTGGGGTTTTATTAACTGTTAACACGCTTGATTTCTTAGAAGCATATTTAGAGATAATAGGTAATTTTTGTGGGTTTATTCCAGCCAAATTTGAGATTTAACATCCAAGTGAACGGAGATTTGTCGTGCAAGCTGTGACCTAGCCATTCTTCGAAACTTTTGGCTAGTAGTGTGAGCAAAATTTCCAACAAAGTTGTTTGGATGATGTTGTTTAGAATGTTCATAACAACTTCATAGTATTGCTTGATTGAGATAGAAGTTGAAGATAAATTCAGCTACTTTGTTTTGCTGTTCAAGGGTTTTTTCTTTGACTTTAAATCATGCCCATAGGATCTTTCTTCGTGCGGTTAATGCACGGAAGAAAGTGTATTTAGTATGGAGGACATTAATAAGTGTATGAATAAGAATCTCCTCAGCCTCAATGTCATCTGAGACCAACTCATTCAACTGTAATTTCTGTAAGATCTTGAACATCTAAAATGTGAGATAATGAAGCTGACTGTTTTAGCAGATTGAAAATTTTCCTCGAAACAGAAAATCGAATAGATTCTTGCAGATGCATTCAACCCTTGTTATTAGTCGATGTAACAGTCTAGAAGGATTTGTATATAAGACTGCAGCTCTTATTGGTTTTTTTAATGTATGATTTGTGCATTAGAAGTAAAAGAAAGAAAAAAAAGTCTTCTCATAATTAAATTTCGATCGATCAGTTAACATATGCTTATTCCTGTTGAATTGTTCAGTTTTGGTGTAAACTGATTGCTCGTGCTCGCTCTTTAACCTCTGCTAATTATTTCAGCTATATTTCACATTTCTACTTGTGTTTCAATAGATAAAGTGGTCATACAGTCGGCACGAGCTAGACATGATCGTCTAACAATTAACTGTTTGGTTTTGTCATATCATCAATATATCAACAGTTTGACTAGATTTTTTTATCATGAATTCAGTGTGAGAATGGGCATATTGCATGCTCTTCCTGCTGCAACAAACTTAAGAATAGATGTGCAACCTGCTCTTGGCCTATCGGCTATAATCGTTGTCGGGCCGTCGAGAAGGTTCTTGAATCCATTAAACTACCCTGCAAACAATCAAAGTACGGATGCAAGGAGATGGTTAGTTATGGTAGTGAAAGTGACCACGAAAAGAAATGCCTACATGCCCCTTGTAAATGCCCTCTTCCTGATTGCAACTTTGTTGCCTCATCTAAGCAATTATCACTACATTTCAGCAGTAAACATACAGACTCTGCTATCAGCTTTCAGTTCAGTTCTAGCTTCACCATTTGCCTAAACGCTAACGATAATTACCGCGTTCTTCAAGAACAAGGTGATGGTATTCTTTTTATTCTCAGCAATAGTTTTGATCATCTGGGAAATGCTGTTAAAGTTTGCTGCCTTAGACCTCCTTCCTTGAAGGAAGCATTTTCTTATGATCTACGAGTAGAAACTCAAGATCTCTCCCTAGTTTTACAATCTTCCATGAAGAACATTCAATCATCATCAGATTGCTGTCCCTCGACGAGGTTCCTTTTGATTCCACGCGATTTGTTCAGTTCTTCAGGCATGATCAAGTTGAATATCTGCATATGGCAAAACACCGGTGCACCACCGTAGATAAAAGGCGTCGGTAAGTCAACAAGTAAATATCGTGCTGTTTATATAAATGTATATGTCAGTGTGCATATTGTGTACATGTCATGGAAAATAAGGTCAGTCTTAGAAGCTCAGTTATGCTGCATAATTTGTATATAGCAGCAGTTTCCGATTTCGTAAGTTTATTCTAACTCGTTCGGTCCATGGTCTGGGAACTCGGTTGTGTTATATTACCACTACTTAAATGAACTCTTTCAGATGGACCCTGTTCGTGTTTGAAGTTTCTTTTGATTTTTTTGTTCATGTTATCCAAAATGTTCATGAAC

mRNA sequence

ATGGCGAAGTTTTCGGTGGGTGGAGAGGAAGACGGGGAGGACGGATCCAGTACCAGTAGCCCTAGGGCGAAGAGGAAGAGAACCTCCTTTCGCATCAACGCCGTCGTTAATTTTCCCCGGCACAACCAACGGTGTGAAGAAGGGGAAGAGCAGGGTTTCGATTACTGTAAGGAAGAAACTGCGAGCGATGAAGAGCAGAGAAAGCGCCATCGAATTGACGGAATAGAGGAACAGGTTGAAGAGGACGGTACCGAAAACGCACTCTGCTCGGTTAAGTCCTGCTCTAGAAATGTGAAGGAAAATGGCTCCATTTCGATGTTTTTGATCGACCCTGAAGTGTTGGATTGTTCCATTTGTTGTGAACCCTTGAGTGTCCCCATCTTCCAGAGACCTCAGTTTCATCATGATTCGTTCACCATCGTTGTGGCACTAAGACAGTGTGAGAATGGGCATATTGCATGCTCTTCCTGCTGCAACAAACTTAAGAATAGATGTGCAACCTGCTCTTGGCCTATCGGCTATAATCGTTGTCGGGCCGTCGAGAAGGTTCTTGAATCCATTAAACTACCCTGCAAACAATCAAAGTACGGATGCAAGGAGATGGTTAGTTATGGTAGTGAAAGTGACCACGAAAAGAAATGCCTACATGCCCCTTGTAAATGCCCTCTTCCTGATTGCAACTTTGTTGCCTCATCTAAGCAATTATCACTACATTTCAGCAGTAAACATACAGACTCTGCTATCAGCTTTCAGTTCAGTTCTAGCTTCACCATTTGCCTAAACGCTAACGATAATTACCGCGTTCTTCAAGAACAAGGTGATGGTATTCTTTTTATTCTCAGCAATAGTTTTGATCATCTGGGAAATGCTGTTAAAGTTTGCTGCCTTAGACCTCCTTCCTTGAAGGAAGCATTTTCTTATGATCTACGAGTAGAAACTCAAGATCTCTCCCTAGTTTTACAATCTTCCATGAAGAACATTCAATCATCATCAGATTGCTGTCCCTCGACGAGGTTCCTTTTGATTCCACGCGATTTGTTCAGTTCTTCAGGCATGATCAAGTTGAATATCTGCATATGGCAAAACACCGGTGCACCACCGTAGATAAAAGGCGTCGGTAAGTCAACAAGTAAATATCGTGCTGTTTATATAAATGTATATGTCAGTGTGCATATTGTGTACATGTCATGGAAAATAAGGTCAGTCTTAGAAGCTCAGTTATGCTGCATAATTTGTATATAGCAGCAGTTTCCGATTTCGTAAGTTTATTCTAACTCGTTCGGTCCATGGTCTGGGAACTCGGTTGTGTTATATTACCACTACTTAAATGAACTCTTTCAGATGGACCCTGTTCGTGTTTGAAGTTTCTTTTGATTTTTTTGTTCATGTTATCCAAAATGTTCATGAAC

Coding sequence (CDS)

ATGGCGAAGTTTTCGGTGGGTGGAGAGGAAGACGGGGAGGACGGATCCAGTACCAGTAGCCCTAGGGCGAAGAGGAAGAGAACCTCCTTTCGCATCAACGCCGTCGTTAATTTTCCCCGGCACAACCAACGGTGTGAAGAAGGGGAAGAGCAGGGTTTCGATTACTGTAAGGAAGAAACTGCGAGCGATGAAGAGCAGAGAAAGCGCCATCGAATTGACGGAATAGAGGAACAGGTTGAAGAGGACGGTACCGAAAACGCACTCTGCTCGGTTAAGTCCTGCTCTAGAAATGTGAAGGAAAATGGCTCCATTTCGATGTTTTTGATCGACCCTGAAGTGTTGGATTGTTCCATTTGTTGTGAACCCTTGAGTGTCCCCATCTTCCAGAGACCTCAGTTTCATCATGATTCGTTCACCATCGTTGTGGCACTAAGACAGTGTGAGAATGGGCATATTGCATGCTCTTCCTGCTGCAACAAACTTAAGAATAGATGTGCAACCTGCTCTTGGCCTATCGGCTATAATCGTTGTCGGGCCGTCGAGAAGGTTCTTGAATCCATTAAACTACCCTGCAAACAATCAAAGTACGGATGCAAGGAGATGGTTAGTTATGGTAGTGAAAGTGACCACGAAAAGAAATGCCTACATGCCCCTTGTAAATGCCCTCTTCCTGATTGCAACTTTGTTGCCTCATCTAAGCAATTATCACTACATTTCAGCAGTAAACATACAGACTCTGCTATCAGCTTTCAGTTCAGTTCTAGCTTCACCATTTGCCTAAACGCTAACGATAATTACCGCGTTCTTCAAGAACAAGGTGATGGTATTCTTTTTATTCTCAGCAATAGTTTTGATCATCTGGGAAATGCTGTTAAAGTTTGCTGCCTTAGACCTCCTTCCTTGAAGGAAGCATTTTCTTATGATCTACGAGTAGAAACTCAAGATCTCTCCCTAGTTTTACAATCTTCCATGAAGAACATTCAATCATCATCAGATTGCTGTCCCTCGACGAGGTTCCTTTTGATTCCACGCGATTTGTTCAGTTCTTCAGGCATGATCAAGTTGAATATCTGCATATGGCAAAACACCGGTGCACCACCGTAG

Protein sequence

MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEETASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICCEPLSVPIFQRPQFHHDSFTIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPSLKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIWQNTGAPP

Homology

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BLAST of Carg18263 vs. NCBI nr
Match: KAG7032731.1 (E3 ubiquitin-protein ligase SINA-like 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 755.0 bits (1948), Expect = 3.1e-214
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0


Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET
Sbjct: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60

Query: 61  ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC 120
           ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC
Sbjct: 61  ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC 120

Query: 121 EPLSVPIFQRPQFHHDSFTIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV 180
           EPLSVPIFQRPQFHHDSFTIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV
Sbjct: 121 EPLSVPIFQRPQFHHDSFTIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV 180

Query: 181 EKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFS 240
           EKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFS
Sbjct: 181 EKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFS 240

Query: 241 SKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPS 300
           SKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPS
Sbjct: 241 SKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPS 300

Query: 301 LKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIW 360
           LKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIW
Sbjct: 301 LKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIW 360

Query: 361 QNTGAPP 368
           QNTGAPP
Sbjct: 361 QNTGAPP 367

[Close]

BLAST of Carg18263 vs. NCBI nr
Match: XP_022956630.1 (E3 ubiquitin-protein ligase SINA-like 10 [Cucurbita moschata] >KAG6602037.1 E3 ubiquitin-protein ligase SINA-like 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 708.4 bits (1827), Expect = 3.3e-200
Identity = 350/367 (95.37%), Postives = 350/367 (95.37%), Query Frame = 0


Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET
Sbjct: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60

Query: 61  ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC 120
           ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC
Sbjct: 61  ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC 120

Query: 121 EPLSVPIFQRPQFHHDSFTIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV 180
           EPLSVPIF                 QCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV
Sbjct: 121 EPLSVPIF-----------------QCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV 180

Query: 181 EKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFS 240
           EKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFS
Sbjct: 181 EKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFS 240

Query: 241 SKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPS 300
           SKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPS
Sbjct: 241 SKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPS 300

Query: 301 LKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIW 360
           LKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIW
Sbjct: 301 LKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIW 350

Query: 361 QNTGAPP 368
           QNTGAPP
Sbjct: 361 QNTGAPP 350

[Close]

BLAST of Carg18263 vs. NCBI nr
Match: XP_023534163.1 (E3 ubiquitin-protein ligase SINA-like 10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 695.3 bits (1793), Expect = 2.9e-196
Identity = 344/367 (93.73%), Postives = 346/367 (94.28%), Query Frame = 0


Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET
Sbjct: 30  MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 89

Query: 61  ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC 120
           ASDEEQRKRHRIDGIEEQV EDGTE ALCSVKSCS+NVKENGSISMFLIDPEVLDCSICC
Sbjct: 90  ASDEEQRKRHRIDGIEEQVGEDGTEKALCSVKSCSKNVKENGSISMFLIDPEVLDCSICC 149

Query: 121 EPLSVPIFQRPQFHHDSFTIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV 180
           EPLSVPIF                 QCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV
Sbjct: 150 EPLSVPIF-----------------QCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV 209

Query: 181 EKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFS 240
           EKVLESIKLPCKQSKYGCKE+VSYGSESDHEKKCLHAPCKCPL DCNFVASSKQLSLHFS
Sbjct: 210 EKVLESIKLPCKQSKYGCKEIVSYGSESDHEKKCLHAPCKCPLSDCNFVASSKQLSLHFS 269

Query: 241 SKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPS 300
           SKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPS
Sbjct: 270 SKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPS 329

Query: 301 LKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIW 360
           LKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSG IKLNICIW
Sbjct: 330 LKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGKIKLNICIW 379

Query: 361 QNTGAPP 368
           QNTGAPP
Sbjct: 390 QNTGAPP 379

[Close]

BLAST of Carg18263 vs. NCBI nr
Match: XP_022990964.1 (E3 ubiquitin-protein ligase SINA-like 10 [Cucurbita maxima])

HSP 1 Score: 665.6 bits (1716), Expect = 2.4e-187
Identity = 331/367 (90.19%), Postives = 339/367 (92.37%), Query Frame = 0


Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHN++ EEGEEQGFDYCKEET
Sbjct: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNRQREEGEEQGFDYCKEET 60

Query: 61  ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC 120
           ASDEEQRKRHRID IEEQV EDGTE ALCSVKSCS+NVKENGSISMFLIDPEVLDCSICC
Sbjct: 61  ASDEEQRKRHRIDEIEEQVGEDGTEKALCSVKSCSKNVKENGSISMFLIDPEVLDCSICC 120

Query: 121 EPLSVPIFQRPQFHHDSFTIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV 180
           EPLSVPIF                 QCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV
Sbjct: 121 EPLSVPIF-----------------QCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV 180

Query: 181 EKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFS 240
           EKVLESI+LPCKQSKYGCKE+VSYGSESDH+KKCLHAPCKCPL DCNFVASSKQLSLHFS
Sbjct: 181 EKVLESIRLPCKQSKYGCKEIVSYGSESDHDKKCLHAPCKCPLSDCNFVASSKQLSLHFS 240

Query: 241 SKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPS 300
           SKHTDSAISFQFSSSFTICLNANDNY VLQEQGDGILFILSNSFDHLGNAVKVCC+RPPS
Sbjct: 241 SKHTDSAISFQFSSSFTICLNANDNYCVLQEQGDGILFILSNSFDHLGNAVKVCCIRPPS 300

Query: 301 LKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIW 360
           LKEAFSYDLRVETQDLSLVLQSSMKNI+SSSDC PSTRFLLIPRDLFSSS  IKLNICIW
Sbjct: 301 LKEAFSYDLRVETQDLSLVLQSSMKNIRSSSDCYPSTRFLLIPRDLFSSSSKIKLNICIW 350

Query: 361 QNTGAPP 368
           QNTG  P
Sbjct: 361 QNTGGAP 350

[Close]

BLAST of Carg18263 vs. NCBI nr
Match: XP_038874338.1 (putative E3 ubiquitin-protein ligase SINA-like 6 [Benincasa hispida])

HSP 1 Score: 557.4 bits (1435), Expect = 9.4e-155
Identity = 277/368 (75.27%), Postives = 314/368 (85.33%), Query Frame = 0


Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           MAKFSV GEEDG DG   SSPR KRKR+SFRINA V+FPRHN++ E+GE+QGF+  KEE+
Sbjct: 1   MAKFSVDGEEDGGDG--PSSPRGKRKRSSFRINATVDFPRHNEQREQGEQQGFNSDKEES 60

Query: 61  ASDEEQRKRHRIDGIEEQV-EEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSIC 120
            +DEE+ KRHRI  IEE   ++DG++ +LCSVKS ++NVK NGS+SMFLIDPEVLDCSIC
Sbjct: 61  ENDEEETKRHRIHEIEEHARQDDGSKRSLCSVKSGTKNVKPNGSVSMFLIDPEVLDCSIC 120

Query: 121 CEPLSVPIFQRPQFHHDSFTIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRA 180
           CEPLS+PIF                 QCENGHIACSSCCNKLKN+CATCSWPIGYNRCRA
Sbjct: 121 CEPLSIPIF-----------------QCENGHIACSSCCNKLKNKCATCSWPIGYNRCRA 180

Query: 181 VEKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHF 240
           VEKVLESIK PCKQSK+GCKE+V YG+ESDHEK CL+APC CP  DCNF+ASSKQLSLHF
Sbjct: 181 VEKVLESIKFPCKQSKFGCKEIVGYGNESDHEKTCLYAPCLCPHSDCNFMASSKQLSLHF 240

Query: 241 SSKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPP 300
           S+KHT+SA +FQF+SSFTICL  N+ YRVLQEQ DGILFILSNSF++LG+ VK+CCLRP 
Sbjct: 241 SNKHTNSATNFQFNSSFTICLKTNNTYRVLQEQDDGILFILSNSFENLGSVVKICCLRPS 300

Query: 301 SLKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICI 360
           SLKEAFSYDLR ETQDLSLVLQSSMKNIQSSSDCC STRFL+IPRDLF SSGMI+LNICI
Sbjct: 301 SLKEAFSYDLRAETQDLSLVLQSSMKNIQSSSDCCHSTRFLMIPRDLFCSSGMIRLNICI 348

Query: 361 WQNTGAPP 368
           WQN G+PP
Sbjct: 361 WQN-GSPP 348

[Close]

BLAST of Carg18263 vs. ExPASy Swiss-Prot
Match: Q84K34 (E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana OX=3702 GN=At5g37930 PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.4e-52
Identity = 133/366 (36.34%), Postives = 190/366 (51.91%), Query Frame = 0


Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           MA+FSV G +DGE  S+ +    KR+R    I+        +     GEE   +   +  
Sbjct: 1   MARFSVCGGDDGEGPSNNNHQSRKRQRLP-SIDENEEDAETSDAGSSGEEDEDETQNQGM 60

Query: 61  ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC 120
             + E R     D   E V E+        V S S +  ++  +S+ L+DP+VLDC ICC
Sbjct: 61  RPESEDRGSTSDDSDREVVIEERRFGKF--VNSQSSSSSKDSPLSVTLLDPDVLDCPICC 120

Query: 121 EPLSVPIFQRPQFHHDSFTIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV 180
           EPL +PIF                 QC+NGH+AC+ CC K++NRC +C+ PIGY RCRA+
Sbjct: 121 EPLKIPIF-----------------QCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAM 180

Query: 181 EKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFS 240
           EKV+E+ ++ C  +KYGCKE  SYG+   HE+ C+  PC CP+ DC++    K L+ H  
Sbjct: 181 EKVIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVR 240

Query: 241 SKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRP-- 300
           ++H D  ISF +++  TI L+ N    +LQE+ DG + ++          V V C+ P  
Sbjct: 241 AEHKDDLISFVWNTRLTISLDLNKKTTILQEENDGHVIVVQVFRALHAVYVSVSCIAPLT 300

Query: 301 PSLKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNIC 360
           P +    S  L   T D  L     +KNIQ  ++  P   F+LIP  LF  SG   LN+ 
Sbjct: 301 PGVGR-LSCRLAKITVDSLLKQGFMVKNIQKVTNEHPEDGFMLIPSYLF--SGNDNLNLQ 343

Query: 361 IWQNTG 365
           IW   G
Sbjct: 361 IWIGHG 343

[Close]

BLAST of Carg18263 vs. ExPASy Swiss-Prot
Match: Q9FKD7 (E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana OX=3702 GN=At5g37890 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.6e-40
Identity = 96/263 (36.50%), Postives = 137/263 (52.09%), Query Frame = 0


Query: 88  LCSVKSCSRNVKENGSISMFLIDPEVLDCSICCEPLSVPIFQRPQFHHDSFTIVVALRQC 147
           L S  +  R+ K+    S  L+D E+LDC IC E  ++PIF                 QC
Sbjct: 26  LSSSDAAKRDAKKR---STMLMDLEILDCPICYEAFTIPIF-----------------QC 85

Query: 148 ENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGCKEMVSYGSE 207
           +NGH+ACSSCC KL N+C  C+ P+G+NRCRA+E VLESI +PC  +K GCK+ VSYG E
Sbjct: 86  DNGHLACSSCCPKLNNKCPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKKNVSYGKE 145

Query: 208 SDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTD--SAISFQFSSSFTICLNANDN 267
             HEK+C+ + C CP  DCN+ +S K L  H+   H +     +F      ++ +N +  
Sbjct: 146 LTHEKECMFSHCACPALDCNYTSSYKDLYTHYRITHMEINQINTFICDIPLSVRMNISKK 205

Query: 268 YRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPSLK-EAFSYDLRVETQDLSLVLQS-S 327
             +  E     LF +    +  G  V V C+ P S +   +SY L       +++ QS  
Sbjct: 206 ILIRTEHLTNHLFAVQCFREPYGVYVTVSCIAPSSPELSQYSYALSYTVDGHTVIYQSPE 265

Query: 328 MKNIQSSSDCCPSTRFLLIPRDL 347
           +K +   S   P   F+LIP  L
Sbjct: 266 VKRVLKLSFQTPQENFMLIPNSL 268

[Close]

BLAST of Carg18263 vs. ExPASy Swiss-Prot
Match: Q9FKD9 (Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana OX=3702 GN=At5g37870 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.2e-39
Identity = 95/287 (33.10%), Postives = 151/287 (52.61%), Query Frame = 0


Query: 80  EEDGTENALC-SVKSCSRNVKENGSISMFLIDPEVLDCSICCEPLSVPIFQRPQFHHDSF 139
           E +G++   C S+ S     + + + S  L D ++LDC IC + L +P+F          
Sbjct: 8   ERNGSQKRHCSSISSDDGRKRVDKTRSAMLTDLDILDCPICYQALKIPVF---------- 67

Query: 140 TIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGC 199
                  QC NGH+ACSSCC KL+N+C  C+ P+G+ RCRA+E+VLES+ +PC+ +  GC
Sbjct: 68  -------QCGNGHLACSSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGC 127

Query: 200 KEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAISFQFS--SSF 259
            + + YG ES HEK C  +PC CP+  CN+  S K L  H+   H+  + ++ F+  S  
Sbjct: 128 TKTIYYGRESTHEKICNFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAYSFNGVSYI 187

Query: 260 TICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRP--PSLKEAFSYDLRVET- 319
              +  +D   + +     +LF++    +  G  V V C+ P  P + E FSY L   T 
Sbjct: 188 AAMMFISDKILIERVYEKKLLFVVQCFEEPCGVYVSVSCIAPSAPEVGE-FSYGLLYTTW 247

Query: 320 QDLSLVLQS-SMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICI 360
           + +++  QS  +K +   S   P   F+LIP  L     ++ + +CI
Sbjct: 248 EGVTMTYQSPKVKKVLKVSSQRPKDSFMLIPHSLLCGP-LLGMMLCI 275

[Close]

BLAST of Carg18263 vs. ExPASy Swiss-Prot
Match: Q9FKD5 (Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis thaliana OX=3702 GN=At5g37910 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.3e-36
Identity = 90/283 (31.80%), Postives = 141/283 (49.82%), Query Frame = 0


Query: 87  ALCSVKSCSRNVKENGSISMFLIDPEVLDCSICCEPLSVPIFQRPQFHHDSFTIVVALRQ 146
           AL S       V +    ++ L+D ++LDC ICCE L+ PIF                 Q
Sbjct: 9   ALISQGDGGERVAKRQRSAIVLLDLDILDCPICCEALTSPIF-----------------Q 68

Query: 147 CENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGCKEMVSYGS 206
           C+NGH+AC SCC KL N+C  C+ P+G++R RA+E VLESI +PC   ++GC +   YG 
Sbjct: 69  CDNGHLACGSCCPKLSNKCPACTLPVGHSRSRAMESVLESILIPCPNVRFGCTKSFFYGK 128

Query: 207 ESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAI----SFQFSSSFTICLNA 266
           ES HEK+C+ + C CP   C++  S K L  H+   H+ +       F+ ++ FT  +  
Sbjct: 129 ESAHEKECIFSQCSCPSSVCDYTGSYKDLYAHYKLTHSTNIFWNIKRFRCANFFTTSMLI 188

Query: 267 NDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRP--PSLKEAFSYDLRVETQDLSLVL 326
           +D   + +     +L  +    +  G  V V  + P  P + E FSY L       ++  
Sbjct: 189 SDKILIKRVHEKKLLLAVQCFREPCGVYVTVSFIAPSAPEVGE-FSYQLSYNVDGHTVTY 248

Query: 327 QS-SMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIWQN 363
           +S  +K +   S   P   F+LIP  L     ++++ + I +N
Sbjct: 249 ESPEVKRVCKVSIETPQENFMLIPHSLLRGD-LLEMQVFIIEN 272

[Close]

BLAST of Carg18263 vs. ExPASy Swiss-Prot
Match: Q9C6H3 (E3 ubiquitin-protein ligase SINA-like 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66620 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.0e-35
Identity = 100/299 (33.44%), Postives = 138/299 (46.15%), Query Frame = 0


Query: 66  QRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICCEPLSV 125
           +RKR R+    E VE  G +            V  +G+    L + ++LDC ICC  L+ 
Sbjct: 9   RRKRQRVPSSVESVENGGGD-----------AVARSGT----LFELDLLDCPICCHALTS 68

Query: 126 PIFQRPQFHHDSFTIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLE 185
           PIF                 QC+NGHIACSSCC KL+N+C +C+ PIG  R R +E+V+E
Sbjct: 69  PIF-----------------QCDNGHIACSSCCTKLRNKCPSCALPIGNFRSRIMERVVE 128

Query: 186 SIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTD 245
           ++ + C   K+GC E  SYG E  HEK C  A C CP P+CN+    K L  HF   H D
Sbjct: 129 AVMVTCPNVKHGCTEKFSYGKELIHEKDCRFALCYCPAPNCNYSGVYKDLYSHFYVNHYD 188

Query: 246 SAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRP--PSLKE 305
           +       +     L  ++   VLQ  G G L  +    +  G  V V C+ P  P + E
Sbjct: 189 TWNQIGCGNFAGAWLRISEKILVLQ-YGQGPLIAVQCFKETQGMYVTVNCIAPCAPGVGE 248

Query: 306 ---AFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICI 360
                SY + +      +     M  IQ  S   P   F+L+P         +K+ ICI
Sbjct: 249 LSFELSYKMPMGGNSTMMFKSEEMNRIQKVSFQTPEKDFMLVPYYFLGDFSTLKMEICI 274

[Close]

BLAST of Carg18263 vs. ExPASy TrEMBL
Match: A0A6J1GYB0 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111458302 PE=3 SV=1)

HSP 1 Score: 708.4 bits (1827), Expect = 1.6e-200
Identity = 350/367 (95.37%), Postives = 350/367 (95.37%), Query Frame = 0


Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET
Sbjct: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60

Query: 61  ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC 120
           ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC
Sbjct: 61  ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC 120

Query: 121 EPLSVPIFQRPQFHHDSFTIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV 180
           EPLSVPIF                 QCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV
Sbjct: 121 EPLSVPIF-----------------QCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV 180

Query: 181 EKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFS 240
           EKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFS
Sbjct: 181 EKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFS 240

Query: 241 SKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPS 300
           SKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPS
Sbjct: 241 SKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPS 300

Query: 301 LKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIW 360
           LKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIW
Sbjct: 301 LKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIW 350

Query: 361 QNTGAPP 368
           QNTGAPP
Sbjct: 361 QNTGAPP 350

[Close]

BLAST of Carg18263 vs. ExPASy TrEMBL
Match: A0A6J1JTG5 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111487698 PE=3 SV=1)

HSP 1 Score: 665.6 bits (1716), Expect = 1.2e-187
Identity = 331/367 (90.19%), Postives = 339/367 (92.37%), Query Frame = 0


Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHN++ EEGEEQGFDYCKEET
Sbjct: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNRQREEGEEQGFDYCKEET 60

Query: 61  ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC 120
           ASDEEQRKRHRID IEEQV EDGTE ALCSVKSCS+NVKENGSISMFLIDPEVLDCSICC
Sbjct: 61  ASDEEQRKRHRIDEIEEQVGEDGTEKALCSVKSCSKNVKENGSISMFLIDPEVLDCSICC 120

Query: 121 EPLSVPIFQRPQFHHDSFTIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV 180
           EPLSVPIF                 QCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV
Sbjct: 121 EPLSVPIF-----------------QCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV 180

Query: 181 EKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFS 240
           EKVLESI+LPCKQSKYGCKE+VSYGSESDH+KKCLHAPCKCPL DCNFVASSKQLSLHFS
Sbjct: 181 EKVLESIRLPCKQSKYGCKEIVSYGSESDHDKKCLHAPCKCPLSDCNFVASSKQLSLHFS 240

Query: 241 SKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPS 300
           SKHTDSAISFQFSSSFTICLNANDNY VLQEQGDGILFILSNSFDHLGNAVKVCC+RPPS
Sbjct: 241 SKHTDSAISFQFSSSFTICLNANDNYCVLQEQGDGILFILSNSFDHLGNAVKVCCIRPPS 300

Query: 301 LKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIW 360
           LKEAFSYDLRVETQDLSLVLQSSMKNI+SSSDC PSTRFLLIPRDLFSSS  IKLNICIW
Sbjct: 301 LKEAFSYDLRVETQDLSLVLQSSMKNIRSSSDCYPSTRFLLIPRDLFSSSSKIKLNICIW 350

Query: 361 QNTGAPP 368
           QNTG  P
Sbjct: 361 QNTGGAP 350

[Close]

BLAST of Carg18263 vs. ExPASy TrEMBL
Match: A0A1S3CD49 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499310 PE=3 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.8e-151
Identity = 270/366 (73.77%), Postives = 305/366 (83.33%), Query Frame = 0


Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           MAKFSV GEED  DG   SSPR KRKR+SFRINA V+FPR +++ E+GEEQGF+  KEE+
Sbjct: 1   MAKFSVDGEEDAGDG--PSSPRGKRKRSSFRINATVDFPRRSEQREQGEEQGFNSDKEES 60

Query: 61  ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC 120
            +DE+Q KRHR D IEE + EDG + AL S KSC++N K NGS+SMFLIDPEVLDCSICC
Sbjct: 61  ENDEDQSKRHRNDEIEEHLREDGGKRALWSGKSCTKNAKPNGSVSMFLIDPEVLDCSICC 120

Query: 121 EPLSVPIFQRPQFHHDSFTIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV 180
           EPLS+PIF                 QCENGHIACSSCCNKLKN+CATCSWPIGYNRCRAV
Sbjct: 121 EPLSIPIF-----------------QCENGHIACSSCCNKLKNKCATCSWPIGYNRCRAV 180

Query: 181 EKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFS 240
           EKVLESIKLPCKQSK+GCKE++ YG+ESDHEK CL+APC CP  DC F+AS+KQLSLHFS
Sbjct: 181 EKVLESIKLPCKQSKFGCKEIIGYGNESDHEKTCLYAPCLCPYSDCKFIASAKQLSLHFS 240

Query: 241 SKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPS 300
           +KHT+SA +F FSSSFTICL  ND Y VLQEQ DG+LFILSNS ++LG+ VK+CCL+PPS
Sbjct: 241 NKHTNSATNFHFSSSFTICLKTNDTYHVLQEQ-DGVLFILSNSSENLGSVVKICCLQPPS 300

Query: 301 LKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIW 360
           LKE FSYDLR ETQDLSLVLQSSMKNIQSSSDCC STRFL+IPRDLFSSSGMIKLNICIW
Sbjct: 301 LKETFSYDLRAETQDLSLVLQSSMKNIQSSSDCCHSTRFLMIPRDLFSSSGMIKLNICIW 346

Query: 361 QNTGAP 367
           QN  +P
Sbjct: 361 QNGSSP 346

[Close]

BLAST of Carg18263 vs. ExPASy TrEMBL
Match: A0A6J1CL96 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111011997 PE=3 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 7.0e-140
Identity = 258/369 (69.92%), Postives = 294/369 (79.67%), Query Frame = 0


Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           MAKFSVGGE+DGEDG   SSP  KR+R S RINA V++P  N+       + FD  KE+T
Sbjct: 29  MAKFSVGGEDDGEDG-GPSSPTGKRRRPSSRINATVDYPHQNE-----PREAFDSDKEQT 88

Query: 61  ASDE-EQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKEN--GSISMFLIDPEVLDCS 120
            ++E +QRKRHRI  I +QV E  T+ AL SV SCS+ +K N  GS+ MFLIDPEVLDCS
Sbjct: 89  ETEELDQRKRHRIHEIHQQVPEGATKKALWSVTSCSKTLKTNGGGSVPMFLIDPEVLDCS 148

Query: 121 ICCEPLSVPIFQRPQFHHDSFTIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRC 180
           ICCEPL+VPIF                 QCENGHIACSSCCNKLKN+CA+CSWPIGYNRC
Sbjct: 149 ICCEPLTVPIF-----------------QCENGHIACSSCCNKLKNKCASCSWPIGYNRC 208

Query: 181 RAVEKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSL 240
           RAVEKVLESIKLPCKQS+YGCKEMVSYG+ES+HEK CL+APC CPL DCNF ASSKQLSL
Sbjct: 209 RAVEKVLESIKLPCKQSQYGCKEMVSYGNESEHEKTCLYAPCLCPLSDCNFTASSKQLSL 268

Query: 241 HFSSKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLR 300
           HFSSKH +SA +FQFSSSFTICL  +D+Y +LQEQ DGILFILSNSF+HLG+AVKVCCLR
Sbjct: 269 HFSSKHKNSATNFQFSSSFTICLKTDDSYHILQEQDDGILFILSNSFEHLGSAVKVCCLR 328

Query: 301 PPSLKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNI 360
           P  LKEAF+YDL+ ETQDLSL L SSMKNI+SSSDCC STRFLLIP DLF S G IKL+I
Sbjct: 329 PNFLKEAFTYDLKAETQDLSLFLHSSMKNIKSSSDCCHSTRFLLIPSDLFDSRGQIKLDI 374

Query: 361 CIWQNTGAP 367
           CIW++  +P
Sbjct: 389 CIWRDGSSP 374

[Close]

BLAST of Carg18263 vs. ExPASy TrEMBL
Match: A0A2P6RGT3 (RING-type E3 ubiquitin transferase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0493571 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 5.3e-79
Identity = 170/379 (44.85%), Postives = 231/379 (60.95%), Query Frame = 0


Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           M +FS+GG+EDGE     SSPR KR+R   R  A V         E G   G    ++E+
Sbjct: 1   MTRFSLGGDEDGE---GPSSPRQKRRRLVLRTAATVAIG------ERGGGGGLQAVQDES 60

Query: 61  AS------DEEQRKRHRIDGIEEQVEED---GTENALCSVKSCSRNVKE--------NGS 120
           +S      +EE+ +    D  EE+ E D     E+   S++  S +  +        + S
Sbjct: 61  SSETEEEEEEEEEEEEESDSEEEETEGDEFVTLESPRTSIELGSASAAQETALASTTDRS 120

Query: 121 ISMFLIDPEVLDCSICCEPLSVPIFQRPQFHHDSFTIVVALRQCENGHIACSSCCNKLKN 180
           IS+ L DP+VLDC ICCE L+VP+F                 QCENGHIACSSC  K+KN
Sbjct: 121 ISITLTDPDVLDCPICCESLTVPVF-----------------QCENGHIACSSCSTKIKN 180

Query: 181 RCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPL 240
           +C +CSWPIGYNRCRA+EKVLESI++ C+  KYGCKE ++  ++++HEK C+H+PC CP 
Sbjct: 181 KCPSCSWPIGYNRCRAIEKVLESIRMSCQNIKYGCKERMTCNNKNEHEKACMHSPCSCPH 240

Query: 241 PDCNFVASSKQLSLHFSSKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNS 300
             CNFV+S+K+L  HFSS H +SA  F ++SSF+I +N ND + VLQEQ DGILFIL N+
Sbjct: 241 SGCNFVSSTKKLYQHFSSNHLNSATRFLYNSSFSITINFNDKFLVLQEQNDGILFILDNT 300

Query: 301 FDHLGNAVKVCCLRPPSLKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIP 360
            + LGN V++ C++ P     F YDL  +T+   L LQS   +  S      S+R L+IP
Sbjct: 301 TEILGNMVRLSCIQ-PRFMGGFFYDLTAKTKGCLLKLQSFTNSTPSHCHSPTSSRSLIIP 352

Query: 361 RDLFSSSGMIKLNICIWQN 363
            D FSS G +K++ICIW+N
Sbjct: 361 GDFFSSCGQLKMDICIWRN 352

[Close]

BLAST of Carg18263 vs. TAIR 10
Match: AT5G37930.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 207.6 bits (527), Expect = 1.7e-53
Identity = 133/366 (36.34%), Postives = 190/366 (51.91%), Query Frame = 0


Query: 1   MAKFSVGGEEDGEDGSSTSSPRAKRKRTSFRINAVVNFPRHNQRCEEGEEQGFDYCKEET 60
           MA+FSV G +DGE  S+ +    KR+R    I+        +     GEE   +   +  
Sbjct: 1   MARFSVCGGDDGEGPSNNNHQSRKRQRLP-SIDENEEDAETSDAGSSGEEDEDETQNQGM 60

Query: 61  ASDEEQRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICC 120
             + E R     D   E V E+        V S S +  ++  +S+ L+DP+VLDC ICC
Sbjct: 61  RPESEDRGSTSDDSDREVVIEERRFGKF--VNSQSSSSSKDSPLSVTLLDPDVLDCPICC 120

Query: 121 EPLSVPIFQRPQFHHDSFTIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAV 180
           EPL +PIF                 QC+NGH+AC+ CC K++NRC +C+ PIGY RCRA+
Sbjct: 121 EPLKIPIF-----------------QCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAM 180

Query: 181 EKVLESIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFS 240
           EKV+E+ ++ C  +KYGCKE  SYG+   HE+ C+  PC CP+ DC++    K L+ H  
Sbjct: 181 EKVIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVR 240

Query: 241 SKHTDSAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRP-- 300
           ++H D  ISF +++  TI L+ N    +LQE+ DG + ++          V V C+ P  
Sbjct: 241 AEHKDDLISFVWNTRLTISLDLNKKTTILQEENDGHVIVVQVFRALHAVYVSVSCIAPLT 300

Query: 301 PSLKEAFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNIC 360
           P +    S  L   T D  L     +KNIQ  ++  P   F+LIP  LF  SG   LN+ 
Sbjct: 301 PGVGR-LSCRLAKITVDSLLKQGFMVKNIQKVTNEHPEDGFMLIPSYLF--SGNDNLNLQ 343

Query: 361 IWQNTG 365
           IW   G
Sbjct: 361 IWIGHG 343

[Close]

BLAST of Carg18263 vs. TAIR 10
Match: AT5G37890.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-41
Identity = 96/263 (36.50%), Postives = 137/263 (52.09%), Query Frame = 0


Query: 88  LCSVKSCSRNVKENGSISMFLIDPEVLDCSICCEPLSVPIFQRPQFHHDSFTIVVALRQC 147
           L S  +  R+ K+    S  L+D E+LDC IC E  ++PIF                 QC
Sbjct: 26  LSSSDAAKRDAKKR---STMLMDLEILDCPICYEAFTIPIF-----------------QC 85

Query: 148 ENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGCKEMVSYGSE 207
           +NGH+ACSSCC KL N+C  C+ P+G+NRCRA+E VLESI +PC  +K GCK+ VSYG E
Sbjct: 86  DNGHLACSSCCPKLNNKCPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKKNVSYGKE 145

Query: 208 SDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTD--SAISFQFSSSFTICLNANDN 267
             HEK+C+ + C CP  DCN+ +S K L  H+   H +     +F      ++ +N +  
Sbjct: 146 LTHEKECMFSHCACPALDCNYTSSYKDLYTHYRITHMEINQINTFICDIPLSVRMNISKK 205

Query: 268 YRVLQEQGDGILFILSNSFDHLGNAVKVCCLRPPSLK-EAFSYDLRVETQDLSLVLQS-S 327
             +  E     LF +    +  G  V V C+ P S +   +SY L       +++ QS  
Sbjct: 206 ILIRTEHLTNHLFAVQCFREPYGVYVTVSCIAPSSPELSQYSYALSYTVDGHTVIYQSPE 265

Query: 328 MKNIQSSSDCCPSTRFLLIPRDL 347
           +K +   S   P   F+LIP  L
Sbjct: 266 VKRVLKLSFQTPQENFMLIPNSL 268

[Close]

BLAST of Carg18263 vs. TAIR 10
Match: AT5G37870.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 163.3 bits (412), Expect = 3.7e-40
Identity = 95/287 (33.10%), Postives = 151/287 (52.61%), Query Frame = 0


Query: 80  EEDGTENALC-SVKSCSRNVKENGSISMFLIDPEVLDCSICCEPLSVPIFQRPQFHHDSF 139
           E +G++   C S+ S     + + + S  L D ++LDC IC + L +P+F          
Sbjct: 8   ERNGSQKRHCSSISSDDGRKRVDKTRSAMLTDLDILDCPICYQALKIPVF---------- 67

Query: 140 TIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGC 199
                  QC NGH+ACSSCC KL+N+C  C+ P+G+ RCRA+E+VLES+ +PC+ +  GC
Sbjct: 68  -------QCGNGHLACSSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGC 127

Query: 200 KEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAISFQFS--SSF 259
            + + YG ES HEK C  +PC CP+  CN+  S K L  H+   H+  + ++ F+  S  
Sbjct: 128 TKTIYYGRESTHEKICNFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAYSFNGVSYI 187

Query: 260 TICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRP--PSLKEAFSYDLRVET- 319
              +  +D   + +     +LF++    +  G  V V C+ P  P + E FSY L   T 
Sbjct: 188 AAMMFISDKILIERVYEKKLLFVVQCFEEPCGVYVSVSCIAPSAPEVGE-FSYGLLYTTW 247

Query: 320 QDLSLVLQS-SMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICI 360
           + +++  QS  +K +   S   P   F+LIP  L     ++ + +CI
Sbjct: 248 EGVTMTYQSPKVKKVLKVSSQRPKDSFMLIPHSLLCGP-LLGMMLCI 275

[Close]

BLAST of Carg18263 vs. TAIR 10
Match: AT5G37910.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 153.3 bits (386), Expect = 3.8e-37
Identity = 90/283 (31.80%), Postives = 141/283 (49.82%), Query Frame = 0


Query: 87  ALCSVKSCSRNVKENGSISMFLIDPEVLDCSICCEPLSVPIFQRPQFHHDSFTIVVALRQ 146
           AL S       V +    ++ L+D ++LDC ICCE L+ PIF                 Q
Sbjct: 9   ALISQGDGGERVAKRQRSAIVLLDLDILDCPICCEALTSPIF-----------------Q 68

Query: 147 CENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLESIKLPCKQSKYGCKEMVSYGS 206
           C+NGH+AC SCC KL N+C  C+ P+G++R RA+E VLESI +PC   ++GC +   YG 
Sbjct: 69  CDNGHLACGSCCPKLSNKCPACTLPVGHSRSRAMESVLESILIPCPNVRFGCTKSFFYGK 128

Query: 207 ESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTDSAI----SFQFSSSFTICLNA 266
           ES HEK+C+ + C CP   C++  S K L  H+   H+ +       F+ ++ FT  +  
Sbjct: 129 ESAHEKECIFSQCSCPSSVCDYTGSYKDLYAHYKLTHSTNIFWNIKRFRCANFFTTSMLI 188

Query: 267 NDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRP--PSLKEAFSYDLRVETQDLSLVL 326
           +D   + +     +L  +    +  G  V V  + P  P + E FSY L       ++  
Sbjct: 189 SDKILIKRVHEKKLLLAVQCFREPCGVYVTVSFIAPSAPEVGE-FSYQLSYNVDGHTVTY 248

Query: 327 QS-SMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICIWQN 363
           +S  +K +   S   P   F+LIP  L     ++++ + I +N
Sbjct: 249 ESPEVKRVCKVSIETPQENFMLIPHSLLRGD-LLEMQVFIIEN 272

[Close]

BLAST of Carg18263 vs. TAIR 10
Match: AT1G66620.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 151.4 bits (381), Expect = 1.4e-36
Identity = 100/299 (33.44%), Postives = 138/299 (46.15%), Query Frame = 0


Query: 66  QRKRHRIDGIEEQVEEDGTENALCSVKSCSRNVKENGSISMFLIDPEVLDCSICCEPLSV 125
           +RKR R+    E VE  G +            V  +G+    L + ++LDC ICC  L+ 
Sbjct: 9   RRKRQRVPSSVESVENGGGD-----------AVARSGT----LFELDLLDCPICCHALTS 68

Query: 126 PIFQRPQFHHDSFTIVVALRQCENGHIACSSCCNKLKNRCATCSWPIGYNRCRAVEKVLE 185
           PIF                 QC+NGHIACSSCC KL+N+C +C+ PIG  R R +E+V+E
Sbjct: 69  PIF-----------------QCDNGHIACSSCCTKLRNKCPSCALPIGNFRSRIMERVVE 128

Query: 186 SIKLPCKQSKYGCKEMVSYGSESDHEKKCLHAPCKCPLPDCNFVASSKQLSLHFSSKHTD 245
           ++ + C   K+GC E  SYG E  HEK C  A C CP P+CN+    K L  HF   H D
Sbjct: 129 AVMVTCPNVKHGCTEKFSYGKELIHEKDCRFALCYCPAPNCNYSGVYKDLYSHFYVNHYD 188

Query: 246 SAISFQFSSSFTICLNANDNYRVLQEQGDGILFILSNSFDHLGNAVKVCCLRP--PSLKE 305
           +       +     L  ++   VLQ  G G L  +    +  G  V V C+ P  P + E
Sbjct: 189 TWNQIGCGNFAGAWLRISEKILVLQ-YGQGPLIAVQCFKETQGMYVTVNCIAPCAPGVGE 248

Query: 306 ---AFSYDLRVETQDLSLVLQSSMKNIQSSSDCCPSTRFLLIPRDLFSSSGMIKLNICI 360
                SY + +      +     M  IQ  S   P   F+L+P         +K+ ICI
Sbjct: 249 LSFELSYKMPMGGNSTMMFKSEEMNRIQKVSFQTPEKDFMLVPYYFLGDFSTLKMEICI 274

The following BLAST results are available for this feature:

BLAST of Carg18263 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032731.1	3.1e-214	100.00	E3 ubiquitin-protein ligase SINA-like 10, partial [Cucurbita argyrosperma subsp....	[more]
XP_022956630.1	3.3e-200	95.37	E3 ubiquitin-protein ligase SINA-like 10 [Cucurbita moschata] >KAG6602037.1 E3 u...	[more]
XP_023534163.1	2.9e-196	93.73	E3 ubiquitin-protein ligase SINA-like 10 [Cucurbita pepo subsp. pepo]	[more]
XP_022990964.1	2.4e-187	90.19	E3 ubiquitin-protein ligase SINA-like 10 [Cucurbita maxima]	[more]
XP_038874338.1	9.4e-155	75.27	putative E3 ubiquitin-protein ligase SINA-like 6 [Benincasa hispida]	[more]

BLAST of Carg18263 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84K34	2.4e-52	36.34	E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana OX=3702 GN=At5g...	[more]
Q9FKD7	1.6e-40	36.50	E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana OX=3702 GN=At5g3...	[more]
Q9FKD9	5.2e-39	33.10	Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana OX=3702...	[more]
Q9FKD5	5.3e-36	31.80	Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis thaliana OX=3702...	[more]
Q9C6H3	2.0e-35	33.44	E3 ubiquitin-protein ligase SINA-like 2 OS=Arabidopsis thaliana OX=3702 GN=At1g6...	[more]

BLAST of Carg18263 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GYB0	1.6e-200	95.37	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111458302...	[more]
A0A6J1JTG5	1.2e-187	90.19	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111487698 P...	[more]
A0A1S3CD49	1.8e-151	73.77	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499310 PE=3 ...	[more]
A0A6J1CL96	7.0e-140	69.92	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11101199...	[more]
A0A2P6RGT3	5.3e-79	44.85	RING-type E3 ubiquitin transferase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0...	[more]

BLAST of Carg18263 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37930.1	1.7e-53	36.34	Protein with RING/U-box and TRAF-like domains	[more]
AT5G37890.1	1.1e-41	36.50	Protein with RING/U-box and TRAF-like domains	[more]
AT5G37870.1	3.7e-40	33.10	Protein with RING/U-box and TRAF-like domains	[more]
AT5G37910.1	3.8e-37	31.80	Protein with RING/U-box and TRAF-like domains	[more]
AT1G66620.1	1.4e-36	33.44	Protein with RING/U-box and TRAF-like domains	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018121	Seven-in-absentia protein, TRAF-like domain	PFAM	PF03145	Sina	coord: 176..345 e-value: 1.5E-19 score: 70.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 181..239 e-value: 1.2E-15 score: 59.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR46632:SF16	E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4	coord: 56..362
None	No IPR available	SUPERFAMILY	49599	TRAF domain-like	coord: 186..359
IPR044286	E3 ubiquitin-protein ligase SINA-like, plant	PANTHER	PTHR46632	E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4	coord: 56..362
IPR013010	Zinc finger, SIAH-type	PROSITE	PS51081	ZF_SIAH	coord: 186..244 score: 14.176979

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18263-RA	Carg18263-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0008270	zinc ion binding