Carg18257 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18257
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	CENP-V/GFA domain-containing protein
Location	Carg_Chr04: 18061771 .. 18062157 (+)
RNA-Seq Expression	Carg18257
Synteny	Carg18257

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTGTAAGATGGTGATACACAAAGGCGGCTGCCACTGCAAGAGAATAAGATGGGAGGTGGAAGCAGCGGCCAGTGTGACAGCTTGGGAGTGCAATTGTTCGGACTGCTGCATGAGAGGCAACACCCATTTCACTGTGCCGGCTGCAAGGTTCAAGCTTTTAGGAGACTCCGACAAGTTCGTTTCCACCTACACTTTTGGGACCCATATTGCCAACCACACGTTTTGCAAAGTTTGTGGGATCACTTCCTTTTACCATTCGCGATCAACCCCAGATGGGGTTTCGGTTACTTTTAGATGTGTTGATCCTGGGACGTTGGCCCATGTTGAGATTAAGAAGTTTGATGGCGAAAATTGGGAGGCAGCTCATCGTCGTCGACAATAA

mRNA sequence

ATGGATTGTAAGATGGTGATACACAAAGGCGGCTGCCACTGCAAGAGAATAAGATGGGAGGTGGAAGCAGCGGCCAGTGTGACAGCTTGGGAGTGCAATTGTTCGGACTGCTGCATGAGAGGCAACACCCATTTCACTGTGCCGGCTGCAAGGTTCAAGCTTTTAGGAGACTCCGACAAGTTCGTTTCCACCTACACTTTTGGGACCCATATTGCCAACCACACGTTTTGCAAAGTTTGTGGGATCACTTCCTTTTACCATTCGCGATCAACCCCAGATGGGGTTTCGGTTACTTTTAGATGTGTTGATCCTGGGACGTTGGCCCATGTTGAGATTAAGAAGTTTGATGGCGAAAATTGGGAGGCAGCTCATCGTCGTCGACAATAA

Coding sequence (CDS)

ATGGATTGTAAGATGGTGATACACAAAGGCGGCTGCCACTGCAAGAGAATAAGATGGGAGGTGGAAGCAGCGGCCAGTGTGACAGCTTGGGAGTGCAATTGTTCGGACTGCTGCATGAGAGGCAACACCCATTTCACTGTGCCGGCTGCAAGGTTCAAGCTTTTAGGAGACTCCGACAAGTTCGTTTCCACCTACACTTTTGGGACCCATATTGCCAACCACACGTTTTGCAAAGTTTGTGGGATCACTTCCTTTTACCATTCGCGATCAACCCCAGATGGGGTTTCGGTTACTTTTAGATGTGTTGATCCTGGGACGTTGGCCCATGTTGAGATTAAGAAGTTTGATGGCGAAAATTGGGAGGCAGCTCATCGTCGTCGACAATAA

Protein sequence

MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDGENWEAAHRRRQ

Homology

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BLAST of Carg18257 vs. NCBI nr
Match: KAG7032737.1 (Centromere protein V, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.4 bits (729), Expect = 2.4e-73
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 60
           MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK
Sbjct: 1   MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 60

Query: 61  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDGENW 120
           FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDGENW
Sbjct: 61  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDGENW 120

Query: 121 EAAHRRRQ 129
           EAAHRRRQ
Sbjct: 121 EAAHRRRQ 128

[Close]

BLAST of Carg18257 vs. NCBI nr
Match: KAG6602043.1 (Centromere protein V, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 252.7 bits (644), Expect = 1.7e-63
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 60
           MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK
Sbjct: 20  MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 79

Query: 61  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIK 114
           FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIK
Sbjct: 80  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIK 132

[Close]

BLAST of Carg18257 vs. NCBI nr
Match: KAA0062377.1 (centromere protein V isoform X5 [Cucumis melo var. makuwa] >TYK26602.1 centromere protein V isoform X5 [Cucumis melo var. makuwa])

HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56
Identity = 99/121 (81.82%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 4   KMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVS 63
           KMV+H GGCHCKRIRWEVEAA+SV AW+CNCS+C MRGNTHFTVP+  F LLGDS  F+S
Sbjct: 6   KMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFIS 65

Query: 64  TYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDGENWEAA 123
           TYTFGTH A HTFCKVCGITSFYHSRSTPDGVSV+FRCVDPGTL HV+I KFDG NWE A
Sbjct: 66  TYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVQIIKFDGRNWEQA 125

Query: 124 H 125
           H
Sbjct: 126 H 126

[Close]

BLAST of Carg18257 vs. NCBI nr
Match: XP_022999779.1 (centromere protein V-like [Cucurbita maxima] >XP_022999780.1 centromere protein V-like [Cucurbita maxima] >XP_022999781.1 centromere protein V-like [Cucurbita maxima])

HSP 1 Score: 222.2 bits (565), Expect = 2.5e-54
Identity = 92/124 (74.19%), Postives = 107/124 (86.29%), Query Frame = 0


Query: 1   MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 60
           MD ++V+H GGCHCK++RW VEA ASV AW+CNCSDC MR NTHF VP  RFKLLGDS  
Sbjct: 1   MDSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKN 60

Query: 61  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDGENW 120
           F+STYTFGTH A HTFCKVCGITSFYH RS PDGV++TF+CVDPGTLA+VEI++FDG NW
Sbjct: 61  FISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLAYVEIRQFDGSNW 120

Query: 121 EAAH 125
           EA++
Sbjct: 121 EASY 124

[Close]

BLAST of Carg18257 vs. NCBI nr
Match: XP_023546052.1 (centromere protein V [Cucurbita pepo subsp. pepo] >XP_023546053.1 centromere protein V [Cucurbita pepo subsp. pepo] >XP_023546054.1 centromere protein V [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.5 bits (563), Expect = 4.2e-54
Identity = 92/124 (74.19%), Postives = 105/124 (84.68%), Query Frame = 0


Query: 1   MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 60
           MD ++V H GGCHCK++RW VEA ASV AW+CNCSDC MR NTHF VP  RFKLLGDS  
Sbjct: 1   MDSELVAHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKN 60

Query: 61  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDGENW 120
           F+STYTFGTH A HTFCKVCGITSFYH RS PDGV++TF+CVDPGTL HVEI++FDG NW
Sbjct: 61  FISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGSNW 120

Query: 121 EAAH 125
           EA++
Sbjct: 121 EASY 124

[Close]

BLAST of Carg18257 vs. ExPASy Swiss-Prot
Match: Q9CXS4 (Centromere protein V OS=Mus musculus OX=10090 GN=Cenpv PE=1 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 2.0e-30
Identity = 59/124 (47.58%), Postives = 82/124 (66.13%), Query Frame = 0


Query: 5   MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVST 64
           +V H GGCHC  +R+EV A+A +  ++CNCS C  + N HF VPA+RFKLL  ++  ++T
Sbjct: 122 LVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNRHFIVPASRFKLLKGAES-ITT 181

Query: 65  YTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDGENWEAAH 124
           YTF TH A HTFCK CG+ SFY  RS P G  +   C+D GT+  V  ++F+G +WE A 
Sbjct: 182 YTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDEGTVRSVVTEEFNGSDWERAM 241

Query: 125 RRRQ 129
           +  +
Sbjct: 242 KEHK 244

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BLAST of Carg18257 vs. ExPASy Swiss-Prot
Match: Q7Z7K6 (Centromere protein V OS=Homo sapiens OX=9606 GN=CENPV PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 7.6e-30
Identity = 58/124 (46.77%), Postives = 82/124 (66.13%), Query Frame = 0


Query: 5   MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVST 64
           +V H GGCHC  +R+EV A+A +  ++CNCS C  + N HF VPA+RFKLL  ++  ++T
Sbjct: 145 LVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNRHFIVPASRFKLLKGAE-HITT 204

Query: 65  YTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDGENWEAAH 124
           YTF TH A HTFCK CG+ SFY  RS P G  +   C+D GT+  +  ++F+G +WE A 
Sbjct: 205 YTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDEGTVRSMVTEEFNGSDWEKAM 264

Query: 125 RRRQ 129
           +  +
Sbjct: 265 KEHK 267

[Close]

BLAST of Carg18257 vs. ExPASy Swiss-Prot
Match: A0A0U1RR11 (Centromere protein V-like protein 1 OS=Homo sapiens OX=9606 GN=CENPVL1 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-18
Identity = 46/113 (40.71%), Postives = 65/113 (57.52%), Query Frame = 0


Query: 5   MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVST 64
           +V H GGCHC  +R+ V A A +   +C+C  C  + + HF VPA+RF LL  ++  V T
Sbjct: 130 LVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGAESIV-T 189

Query: 65  YTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDG 118
           Y   TH A H+FC  CG+ SF+ + S P    V   C+D GT+  V I++  G
Sbjct: 190 YRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVGG 241

[Close]

BLAST of Carg18257 vs. ExPASy Swiss-Prot
Match: P0DPI3 (Centromere protein V-like protein 2 OS=Homo sapiens OX=9606 GN=CENPVL2 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-18
Identity = 46/113 (40.71%), Postives = 65/113 (57.52%), Query Frame = 0


Query: 5   MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVST 64
           +V H GGCHC  +R+ V A A +   +C+C  C  + + HF VPA+RF LL  ++  V T
Sbjct: 130 LVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGAESIV-T 189

Query: 65  YTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDG 118
           Y   TH A H+FC  CG+ SF+ + S P    V   C+D GT+  V I++  G
Sbjct: 190 YRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVGG 241

[Close]

BLAST of Carg18257 vs. ExPASy Swiss-Prot
Match: A0A0U1RRI6 (Centromere protein V-like protein 3 OS=Homo sapiens OX=9606 GN=CENPVL3 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-18
Identity = 46/113 (40.71%), Postives = 65/113 (57.52%), Query Frame = 0


Query: 5   MVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVST 64
           +V H GGCHC  +R+ V A A +   +C+C  C  + + HF VPA+RF LL  ++  V T
Sbjct: 145 LVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGAESIV-T 204

Query: 65  YTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDG 118
           Y   TH A H+FC  CG+ SF+ + S P    V   C+D GT+  V I++  G
Sbjct: 205 YRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVGG 256

[Close]

BLAST of Carg18257 vs. ExPASy TrEMBL
Match: A0A0A0KN47 (CENP-V/GFA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G410710 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57
Identity = 100/121 (82.64%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 4   KMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVS 63
           +MV+H GGCHCKRIRWEVEAA+SV AW+CNCS+C MRGNTHFTVP+  FKLLGDSD F+S
Sbjct: 6   EMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFKLLGDSDDFIS 65

Query: 64  TYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDGENWEAA 123
           TYTFGTH A HTFCKVCGITSFYHSRSTPDGVSV+FRCVDPGTL HV+I KFDG NWE A
Sbjct: 66  TYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLDHVQIIKFDGTNWEQA 125

Query: 124 H 125
           H
Sbjct: 126 H 126

[Close]

BLAST of Carg18257 vs. ExPASy TrEMBL
Match: A0A5A7V607 (Centromere protein V isoform X5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002330 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 7.6e-57
Identity = 99/121 (81.82%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 4   KMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDKFVS 63
           KMV+H GGCHCKRIRWEVEAA+SV AW+CNCS+C MRGNTHFTVP+  F LLGDS  F+S
Sbjct: 6   KMVVHSGGCHCKRIRWEVEAASSVIAWDCNCSNCSMRGNTHFTVPSKHFTLLGDSHNFIS 65

Query: 64  TYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDGENWEAA 123
           TYTFGTH A HTFCKVCGITSFYHSRSTPDGVSV+FRCVDPGTL HV+I KFDG NWE A
Sbjct: 66  TYTFGTHTAKHTFCKVCGITSFYHSRSTPDGVSVSFRCVDPGTLNHVQIIKFDGRNWEQA 125

Query: 124 H 125
           H
Sbjct: 126 H 126

[Close]

BLAST of Carg18257 vs. ExPASy TrEMBL
Match: A0A6J1KE30 (centromere protein V-like OS=Cucurbita maxima OX=3661 GN=LOC111494027 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54
Identity = 92/124 (74.19%), Postives = 107/124 (86.29%), Query Frame = 0


Query: 1   MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 60
           MD ++V+H GGCHCK++RW VEA ASV AW+CNCSDC MR NTHF VP  RFKLLGDS  
Sbjct: 1   MDSELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKN 60

Query: 61  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDGENW 120
           F+STYTFGTH A HTFCKVCGITSFYH RS PDGV++TF+CVDPGTLA+VEI++FDG NW
Sbjct: 61  FISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLAYVEIRQFDGSNW 120

Query: 121 EAAH 125
           EA++
Sbjct: 121 EASY 124

[Close]

BLAST of Carg18257 vs. ExPASy TrEMBL
Match: A0A6J1G4E1 (centromere protein V-like OS=Cucurbita moschata OX=3662 GN=LOC111450635 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.5e-54
Identity = 91/124 (73.39%), Postives = 104/124 (83.87%), Query Frame = 0


Query: 1   MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 60
           MD ++V+H GGCHCK +RW VEA  SV AW+CNCSDC MR NTHF VP  RFKLLGDS  
Sbjct: 1   MDSELVVHNGGCHCKNVRWRVEAPTSVVAWDCNCSDCFMRANTHFIVPLERFKLLGDSKN 60

Query: 61  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDGENW 120
           F+STYTFGTH A HTFCKVCGITSFYH RS PDGV++TF+CVDPGTL HVEI++FDG NW
Sbjct: 61  FISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEIRQFDGSNW 120

Query: 121 EAAH 125
           EA++
Sbjct: 121 EASY 124

[Close]

BLAST of Carg18257 vs. ExPASy TrEMBL
Match: A0A059BUT9 (CENP-V/GFA domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F02876 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.3e-53
Identity = 88/124 (70.97%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 1   MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 60
           M+ ++++H GGCHC+R+RWEVEA  SV AW+CNCSDC MRGN HF VP+ RFKLLG+SD+
Sbjct: 1   MESELLLHSGGCHCRRVRWEVEAPTSVVAWKCNCSDCSMRGNIHFIVPSERFKLLGNSDQ 60

Query: 61  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDGENW 120
           +++TYTFGTH A HTFCKVCGITSFY  RS PDG++VT+RCVDPGTLAHVEIK+FDG+NW
Sbjct: 61  YLTTYTFGTHTAKHTFCKVCGITSFYKPRSNPDGIAVTYRCVDPGTLAHVEIKQFDGQNW 120

Query: 121 EAAH 125
           E+++
Sbjct: 121 ESSY 124

[Close]

BLAST of Carg18257 vs. TAIR 10
Match: AT5G16940.1 (carbon-sulfur lyases )

HSP 1 Score: 199.1 bits (505), Expect = 2.1e-51
Identity = 80/126 (63.49%), Postives = 102/126 (80.95%), Query Frame = 0


Query: 1   MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 60
           M+ +++ H+GGCHC +I+W V+AA SV AW CNCSDC MRGN HF VP++ F+LL DS  
Sbjct: 1   MESELIFHEGGCHCGKIKWRVKAARSVIAWSCNCSDCSMRGNVHFIVPSSNFELLDDSKD 60

Query: 61  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDGENW 120
           F++TYTFGTH A HTFCKVCGITSFY  RS PDGV+VT +CV  GTLAH+E+K +DG+NW
Sbjct: 61  FITTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGVAVTVKCVKSGTLAHIEVKSYDGQNW 120

Query: 121 EAAHRR 127
           E +H++
Sbjct: 121 EMSHKK 126

[Close]

BLAST of Carg18257 vs. TAIR 10
Match: AT5G16940.2 (carbon-sulfur lyases )

HSP 1 Score: 199.1 bits (505), Expect = 2.1e-51
Identity = 80/126 (63.49%), Postives = 102/126 (80.95%), Query Frame = 0


Query: 1   MDCKMVIHKGGCHCKRIRWEVEAAASVTAWECNCSDCCMRGNTHFTVPAARFKLLGDSDK 60
           M+ +++ H+GGCHC +I+W V+AA SV AW CNCSDC MRGN HF VP++ F+LL DS  
Sbjct: 1   MESELIFHEGGCHCGKIKWRVKAARSVIAWSCNCSDCSMRGNVHFIVPSSNFELLDDSKD 60

Query: 61  FVSTYTFGTHIANHTFCKVCGITSFYHSRSTPDGVSVTFRCVDPGTLAHVEIKKFDGENW 120
           F++TYTFGTH A HTFCKVCGITSFY  RS PDGV+VT +CV  GTLAH+E+K +DG+NW
Sbjct: 61  FITTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGVAVTVKCVKSGTLAHIEVKSYDGQNW 120

Query: 121 EAAHRR 127
           E +H++
Sbjct: 121 EMSHKK 126

The following BLAST results are available for this feature:

BLAST of Carg18257 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032737.1	2.4e-73	100.00	Centromere protein V, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6602043.1	1.7e-63	100.00	Centromere protein V, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAA0062377.1	1.6e-56	81.82	centromere protein V isoform X5 [Cucumis melo var. makuwa] >TYK26602.1 centromer...	[more]
XP_022999779.1	2.5e-54	74.19	centromere protein V-like [Cucurbita maxima] >XP_022999780.1 centromere protein ...	[more]
XP_023546052.1	4.2e-54	74.19	centromere protein V [Cucurbita pepo subsp. pepo] >XP_023546053.1 centromere pro...	[more]

BLAST of Carg18257 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CXS4	2.0e-30	47.58	Centromere protein V OS=Mus musculus OX=10090 GN=Cenpv PE=1 SV=2	[more]
Q7Z7K6	7.6e-30	46.77	Centromere protein V OS=Homo sapiens OX=9606 GN=CENPV PE=1 SV=1	[more]
A0A0U1RR11	1.8e-18	40.71	Centromere protein V-like protein 1 OS=Homo sapiens OX=9606 GN=CENPVL1 PE=2 SV=1	[more]
P0DPI3	1.8e-18	40.71	Centromere protein V-like protein 2 OS=Homo sapiens OX=9606 GN=CENPVL2 PE=3 SV=1	[more]
A0A0U1RRI6	1.8e-18	40.71	Centromere protein V-like protein 3 OS=Homo sapiens OX=9606 GN=CENPVL3 PE=3 SV=1	[more]

BLAST of Carg18257 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN47	1.2e-57	82.64	CENP-V/GFA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G410710 ...	[more]
A0A5A7V607	7.6e-57	81.82	Centromere protein V isoform X5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1KE30	1.2e-54	74.19	centromere protein V-like OS=Cucurbita maxima OX=3661 GN=LOC111494027 PE=3 SV=1	[more]
A0A6J1G4E1	3.5e-54	73.39	centromere protein V-like OS=Cucurbita moschata OX=3662 GN=LOC111450635 PE=3 SV=...	[more]
A0A059BUT9	2.3e-53	70.97	CENP-V/GFA domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F...	[more]

BLAST of Carg18257 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16940.1	2.1e-51	63.49	carbon-sulfur lyases	[more]
AT5G16940.2	2.1e-51	63.49	carbon-sulfur lyases	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006913	CENP-V/GFA domain	PFAM	PF04828	GFA	coord: 31..105 e-value: 1.7E-6 score: 28.2
IPR006913	CENP-V/GFA domain	PROSITE	PS51891	CENP_V_GFA	coord: 8..121 score: 23.240074
None	No IPR available	GENE3D	2.170.150.70		coord: 8..124 e-value: 1.3E-24 score: 88.2
None	No IPR available	PANTHER	PTHR28620	CENTROMERE PROTEIN V	coord: 5..125
None	No IPR available	PANTHER	PTHR28620:SF9	CARBON-SULFUR LYASES	coord: 5..125
IPR011057	Mss4-like superfamily	SUPERFAMILY	51316	Mss4-like	coord: 3..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18257-RA	Carg18257-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016846	carbon-sulfur lyase activity
molecular_function	GO:0046872	metal ion binding