Carg18243 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18243
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr04: 18139285 .. 18139929 (+)
RNA-Seq Expression	Carg18243
Synteny	Carg18243

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGACAGATACAATCGGTTTAACCCATCAAATATTCGCCAGAAAAATATGTTCTTGCCGATGCTCTGTTCTAAGCCGGCGACCAAAGACTGCCGGCCGCCGAGATGCGACCGGGACCGTTCGGAGTCATTTTCCGGCGACCCTTTGTCGCCGAGAATCGGATGTATGGGTCAAGTGAAGCGGAATAACAGAGTTGCAGGTCTTCCGATTTCCCATAGGATTTTGATTACGACCAAAAATGAGAACAGTCCCAACGTTGGTTACTTTAAGTTGAAGAAATTTTTTTCCAGCAAAAATCTCTTGGCTTCCCCCTCCCCCTCTGGCACCGGCACCACCAGGTCCGCCGCCGCCGCTGCATCGGTATCTACAGCGGGTGTCCATAGTTGTAGGAGCAGAAGAAGACCCACCCCAGATTTTGCAAGTAAGAAGAAGGGTGTTTGTGAAAATGGGAATTGTGAATCATTAAGCGTTGTGGATTTGGATCCGCCGTTGCCGGTGGTCCGGCGAGTGCAGAAGGGCGGAGAAGAAAGAGGGGAAATGGAGAATCTTTGGAAGAGGAGGTCAGGTGGAATTGTATTACAGAGCTTGCAGATTCAGCAGACTCATGTTCCGAAGCATCGGCTTCAGATTACGACTGTTTGA

mRNA sequence

ATGGGTGACAGATACAATCGGTTTAACCCATCAAATATTCGCCAGAAAAATATGTTCTTGCCGATGCTCTGTTCTAAGCCGGCGACCAAAGACTGCCGGCCGCCGAGATGCGACCGGGACCGTTCGGAGTCATTTTCCGGCGACCCTTTGTCGCCGAGAATCGGATGTATGGGTCAAGTGAAGCGGAATAACAGAGTTGCAGGTCTTCCGATTTCCCATAGGATTTTGATTACGACCAAAAATGAGAACAGTCCCAACGTTGGTTACTTTAAGTTGAAGAAATTTTTTTCCAGCAAAAATCTCTTGGCTTCCCCCTCCCCCTCTGGCACCGGCACCACCAGGTCCGCCGCCGCCGCTGCATCGGTATCTACAGCGGGTGTCCATAGTTGTAGGAGCAGAAGAAGACCCACCCCAGATTTTGCAAGTAAGAAGAAGGGTGTTTGTGAAAATGGGAATTGTGAATCATTAAGCGTTGTGGATTTGGATCCGCCGTTGCCGGTGGTCCGGCGAGTGCAGAAGGGCGGAGAAGAAAGAGGGGAAATGGAGAATCTTTGGAAGAGGAGGTCAGGTGGAATTGTATTACAGAGCTTGCAGATTCAGCAGACTCATGTTCCGAAGCATCGGCTTCAGATTACGACTGTTTGA

Coding sequence (CDS)

ATGGGTGACAGATACAATCGGTTTAACCCATCAAATATTCGCCAGAAAAATATGTTCTTGCCGATGCTCTGTTCTAAGCCGGCGACCAAAGACTGCCGGCCGCCGAGATGCGACCGGGACCGTTCGGAGTCATTTTCCGGCGACCCTTTGTCGCCGAGAATCGGATGTATGGGTCAAGTGAAGCGGAATAACAGAGTTGCAGGTCTTCCGATTTCCCATAGGATTTTGATTACGACCAAAAATGAGAACAGTCCCAACGTTGGTTACTTTAAGTTGAAGAAATTTTTTTCCAGCAAAAATCTCTTGGCTTCCCCCTCCCCCTCTGGCACCGGCACCACCAGGTCCGCCGCCGCCGCTGCATCGGTATCTACAGCGGGTGTCCATAGTTGTAGGAGCAGAAGAAGACCCACCCCAGATTTTGCAAGTAAGAAGAAGGGTGTTTGTGAAAATGGGAATTGTGAATCATTAAGCGTTGTGGATTTGGATCCGCCGTTGCCGGTGGTCCGGCGAGTGCAGAAGGGCGGAGAAGAAAGAGGGGAAATGGAGAATCTTTGGAAGAGGAGGTCAGGTGGAATTGTATTACAGAGCTTGCAGATTCAGCAGACTCATGTTCCGAAGCATCGGCTTCAGATTACGACTGTTTGA

Protein sequence

MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQVKRNNRVAGLPISHRILITTKNENSPNVGYFKLKKFFSSKNLLASPSPSGTGTTRSAAAAASVSTAGVHSCRSRRRPTPDFASKKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEERGEMENLWKRRSGGIVLQSLQIQQTHVPKHRLQITTV

Homology

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BLAST of Carg18243 vs. NCBI nr
Match: KAG7032751.1 (hypothetical protein SDJN02_06801, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 433.0 bits (1112), Expect = 1.6e-117
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV 60
           MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV
Sbjct: 1   MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV 60

Query: 61  KRNNRVAGLPISHRILITTKNENSPNVGYFKLKKFFSSKNLLASPSPSGTGTTRSAAAAA 120
           KRNNRVAGLPISHRILITTKNENSPNVGYFKLKKFFSSKNLLASPSPSGTGTTRSAAAAA
Sbjct: 61  KRNNRVAGLPISHRILITTKNENSPNVGYFKLKKFFSSKNLLASPSPSGTGTTRSAAAAA 120

Query: 121 SVSTAGVHSCRSRRRPTPDFASKKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEERGE 180
           SVSTAGVHSCRSRRRPTPDFASKKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEERGE
Sbjct: 121 SVSTAGVHSCRSRRRPTPDFASKKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEERGE 180

Query: 181 MENLWKRRSGGIVLQSLQIQQTHVPKHRLQITTV 215
           MENLWKRRSGGIVLQSLQIQQTHVPKHRLQITTV
Sbjct: 181 MENLWKRRSGGIVLQSLQIQQTHVPKHRLQITTV 214

[Close]

BLAST of Carg18243 vs. NCBI nr
Match: XP_023542085.1 (uncharacterized protein LOC111802032 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 413.7 bits (1062), Expect = 9.7e-112
Identity = 208/217 (95.85%), Postives = 209/217 (96.31%), Query Frame = 0


Query: 1   MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV 60
           MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV
Sbjct: 1   MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV 60

Query: 61  KRNNRVAGLPISHRILITTKNENSPNVGYFKLKKFFSSKNLLASPSPSGTGTTRS---AA 120
           KRNNRVAGLPISHRILITTKNENSP VGY KLKKFFSSKNLLASPSPSGTGTTRS    A
Sbjct: 61  KRNNRVAGLPISHRILITTKNENSPTVGYLKLKKFFSSKNLLASPSPSGTGTTRSTAVTA 120

Query: 121 AAASVSTAGVHSCRSRRRPTPDFASKKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEE 180
           AAASVSTAGV+ CRSRRRPTPDFASKKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEE
Sbjct: 121 AAASVSTAGVNGCRSRRRPTPDFASKKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEE 180

Query: 181 RGEMENLWKRRSGGIVLQSLQIQQTHVPKHRLQITTV 215
           RGEMENLWKRRSGGIVLQSLQIQQTHV KHRLQITTV
Sbjct: 181 RGEMENLWKRRSGGIVLQSLQIQQTHVRKHRLQITTV 217

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BLAST of Carg18243 vs. NCBI nr
Match: XP_022955692.1 (uncharacterized protein LOC111457614 [Cucurbita moschata])

HSP 1 Score: 412.1 bits (1058), Expect = 2.8e-111
Identity = 206/217 (94.93%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 1   MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV 60
           MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV
Sbjct: 1   MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV 60

Query: 61  KRNNRVAGLPISHRILITTKNENSPNVGYFKLKKFFSSKNLLASPSPSGTGTTRS---AA 120
           KRNNRVAGLPISHRILITTKNENSP  GYFKLKKFFSSKNLLASPSPSGTGTTRS   AA
Sbjct: 61  KRNNRVAGLPISHRILITTKNENSPTAGYFKLKKFFSSKNLLASPSPSGTGTTRSTAVAA 120

Query: 121 AAASVSTAGVHSCRSRRRPTPDFASKKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEE 180
           AAASVSTAGV+ CRSRRRPTP F +KKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEE
Sbjct: 121 AAASVSTAGVNGCRSRRRPTPAFGNKKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEE 180

Query: 181 RGEMENLWKRRSGGIVLQSLQIQQTHVPKHRLQITTV 215
           RGEMENLWKRRSGGIVLQ LQIQQTHVPKHRLQITTV
Sbjct: 181 RGEMENLWKRRSGGIVLQGLQIQQTHVPKHRLQITTV 217

[Close]

BLAST of Carg18243 vs. NCBI nr
Match: KAG6602058.1 (hypothetical protein SDJN03_07291, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 389.0 bits (998), Expect = 2.6e-104
Identity = 196/200 (98.00%), Postives = 197/200 (98.50%), Query Frame = 0


Query: 18  MFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQVKRNNRVAGLPISHRILI 77
           MFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQVKRNNRVAGLPISHRILI
Sbjct: 1   MFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQVKRNNRVAGLPISHRILI 60

Query: 78  TTKNENSPNVGYFKLKKFFSSKNLLASPSPSGTGTTRS---AAAAASVSTAGVHSCRSRR 137
           TTKNENSPNVGYFKLKKFFSSKNLLASPSPSGTGTTRS   AAAAASVSTAGV+SCRSRR
Sbjct: 61  TTKNENSPNVGYFKLKKFFSSKNLLASPSPSGTGTTRSAAAAAAAASVSTAGVNSCRSRR 120

Query: 138 RPTPDFASKKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEERGEMENLWKRRSGGIVL 197
           RPTPDFASKKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEERGEMENLWKRRSGGIVL
Sbjct: 121 RPTPDFASKKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEERGEMENLWKRRSGGIVL 180

Query: 198 QSLQIQQTHVPKHRLQITTV 215
           QSLQIQQTHVPKHRLQITTV
Sbjct: 181 QSLQIQQTHVPKHRLQITTV 200

[Close]

BLAST of Carg18243 vs. NCBI nr
Match: XP_038875349.1 (uncharacterized protein LOC120067829 [Benincasa hispida])

HSP 1 Score: 345.5 bits (885), Expect = 3.3e-91
Identity = 180/226 (79.65%), Postives = 194/226 (85.84%), Query Frame = 0


Query: 1   MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV 60
           MGD+YNRFNP N+R K+MFLPMLCSKPA KD RPPRCDRDRSESFSGDPLSPRIGCMGQV
Sbjct: 1   MGDKYNRFNPQNVRHKHMFLPMLCSKPAIKDGRPPRCDRDRSESFSGDPLSPRIGCMGQV 60

Query: 61  KRNNRVAGLPISHRILITTKNE-------NSPNVGYFKLKKFFSSKNLLASPSP--SGTG 120
           KRNNRVAGLPISHRILITTKN        N+PNVGYFKLKKFFS+KNLLASPS   +GTG
Sbjct: 61  KRNNRVAGLPISHRILITTKNAVLNSKNGNNPNVGYFKLKKFFSNKNLLASPSSTVTGTG 120

Query: 121 TTRS--AAAAASVSTAGVHSCRSRRRPTPDFA-SKKKGVCENGNCESLSVVDLDPPLPVV 180
           TTRS  AA AAS+S+ GV+ C SRRR  P+ A   KK V ENGNC S ++VDLDPPLPVV
Sbjct: 121 TTRSTAAATAASISSVGVNGCGSRRRAAPNSAIMGKKSVSENGNCGSFNIVDLDPPLPVV 180

Query: 181 RRVQKGGEERGEMENLWKRRSGGIVLQSLQIQQTHVPKHRLQITTV 215
           RRVQK GEERGEM+NLWKRRSGGIVLQSLQIQQTH+PKHRLQITTV
Sbjct: 181 RRVQKAGEERGEMDNLWKRRSGGIVLQSLQIQQTHLPKHRLQITTV 226

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BLAST of Carg18243 vs. ExPASy TrEMBL
Match: A0A6J1GUB8 (uncharacterized protein LOC111457614 OS=Cucurbita moschata OX=3662 GN=LOC111457614 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.4e-111
Identity = 206/217 (94.93%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 1   MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV 60
           MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV
Sbjct: 1   MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV 60

Query: 61  KRNNRVAGLPISHRILITTKNENSPNVGYFKLKKFFSSKNLLASPSPSGTGTTRS---AA 120
           KRNNRVAGLPISHRILITTKNENSP  GYFKLKKFFSSKNLLASPSPSGTGTTRS   AA
Sbjct: 61  KRNNRVAGLPISHRILITTKNENSPTAGYFKLKKFFSSKNLLASPSPSGTGTTRSTAVAA 120

Query: 121 AAASVSTAGVHSCRSRRRPTPDFASKKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEE 180
           AAASVSTAGV+ CRSRRRPTP F +KKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEE
Sbjct: 121 AAASVSTAGVNGCRSRRRPTPAFGNKKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEE 180

Query: 181 RGEMENLWKRRSGGIVLQSLQIQQTHVPKHRLQITTV 215
           RGEMENLWKRRSGGIVLQ LQIQQTHVPKHRLQITTV
Sbjct: 181 RGEMENLWKRRSGGIVLQGLQIQQTHVPKHRLQITTV 217

[Close]

BLAST of Carg18243 vs. ExPASy TrEMBL
Match: A0A6J1JVE8 (uncharacterized protein LOC111489229 OS=Cucurbita maxima OX=3661 GN=LOC111489229 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.6e-91
Identity = 179/222 (80.63%), Postives = 190/222 (85.59%), Query Frame = 0


Query: 1   MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV 60
           MGDRYNRFNP N RQKNMFLPMLCSKPA KD RPPRCD  R+ESFSGDPLSPRIGCMGQV
Sbjct: 1   MGDRYNRFNPQNFRQKNMFLPMLCSKPAIKDGRPPRCDGARTESFSGDPLSPRIGCMGQV 60

Query: 61  KRNNRVAGLPISHRILITTKNE-------NSPNVGYFKLKKFFSSKNLLASPSPSGTGTT 120
           KRNNRVAGLPISHRILI+TKN        ++ NVGYFKLKKFFSSKNLL SPS +GT  T
Sbjct: 61  KRNNRVAGLPISHRILISTKNAVLSHKNGSNANVGYFKLKKFFSSKNLLVSPSTTGTSIT 120

Query: 121 RSAAAAASVSTAGVHSCRSRRRPTPDFA-SKKKGVCENGNCESLSVVDLDPPLPVVRRVQ 180
           RSA AAAS+STAGV+ C SRRR   + A S KK V ENGNC+S SVVDLDPPLPVVRRVQ
Sbjct: 121 RSAVAAASISTAGVNCCGSRRRAASNAAISGKKCVSENGNCDSFSVVDLDPPLPVVRRVQ 180

Query: 181 KGGEERGEMENLWKRRSGGIVLQSLQIQQTHVPKHRLQITTV 215
           K GEERGEMENLWKRRSGGIVLQSLQIQQTH+PKHRLQIT+V
Sbjct: 181 KAGEERGEMENLWKRRSGGIVLQSLQIQQTHLPKHRLQITSV 222

[Close]

BLAST of Carg18243 vs. ExPASy TrEMBL
Match: A0A6J1FF48 (uncharacterized protein LOC111445151 OS=Cucurbita moschata OX=3662 GN=LOC111445151 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.7e-90
Identity = 176/222 (79.28%), Postives = 188/222 (84.68%), Query Frame = 0


Query: 1   MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV 60
           MGDRYNRFNP   RQKNMFLPMLCSKPA KD RPPRCD  R+ESFSGDPLSPRIGCMGQV
Sbjct: 1   MGDRYNRFNPQKFRQKNMFLPMLCSKPAIKDGRPPRCDGARTESFSGDPLSPRIGCMGQV 60

Query: 61  KRNNRVAGLPISHRILITTKNE-------NSPNVGYFKLKKFFSSKNLLASPSPSGTGTT 120
           KRNNRVAGLPISHRILI+TKN        ++ NVGYFKLKKFFSSKNLL SPS +GT  T
Sbjct: 61  KRNNRVAGLPISHRILISTKNAVLSNKNGSNANVGYFKLKKFFSSKNLLVSPSTTGTSIT 120

Query: 121 RSAAAAASVSTAGVHSCRSRRRPTPDFA-SKKKGVCENGNCESLSVVDLDPPLPVVRRVQ 180
           RS  AAAS+STAGV+ C SRRRP  + A S KK V ENGNC+  SVVDLDPPLPV+RRVQ
Sbjct: 121 RSTVAAASISTAGVNCCGSRRRPALNAAISGKKCVSENGNCDFFSVVDLDPPLPVIRRVQ 180

Query: 181 KGGEERGEMENLWKRRSGGIVLQSLQIQQTHVPKHRLQITTV 215
           K GEERGEMENLWKRRSGGIVLQSLQIQQTH+PKHRLQIT+V
Sbjct: 181 KAGEERGEMENLWKRRSGGIVLQSLQIQQTHLPKHRLQITSV 222

[Close]

BLAST of Carg18243 vs. ExPASy TrEMBL
Match: A0A6J1CKJ1 (uncharacterized protein LOC111011846 OS=Momordica charantia OX=3673 GN=LOC111011846 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 5.4e-84
Identity = 171/223 (76.68%), Postives = 181/223 (81.17%), Query Frame = 0


Query: 1   MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV 60
           MGDRYNRFNP N+RQK++FLPMLCSKPA KD R P+CDRDRSESFSGDPLSPRIGC+GQV
Sbjct: 1   MGDRYNRFNPKNLRQKSVFLPMLCSKPAIKDGRQPKCDRDRSESFSGDPLSPRIGCLGQV 60

Query: 61  KRNNRVAGLPISHRILITTKNE-------NSPNVGYFKLKKFFSSKNLLASPSPSGTGTT 120
           KRNNRVAGLPISHRILITTKN        N+ NVGYFKLKKFFSSKNLLASPS S     
Sbjct: 61  KRNNRVAGLPISHRILITTKNAVLNNRKGNNANVGYFKLKKFFSSKNLLASPSAS----A 120

Query: 121 RSAA-AAASVSTAGVHSCRSRRRPTPDFA-SKKKGVCENGNCESLSVVDLDPPLPVVRRV 180
           RSAA  AASVSTA  + C SRRR  P+ A S KK V  NGNC S SVVDLDPPLPVVRRV
Sbjct: 121 RSAAPTAASVSTAAANGCGSRRRAAPNCAISGKKDVSRNGNCNSFSVVDLDPPLPVVRRV 180

Query: 181 QKGGEERGEMENLWKRRSGGIVLQSLQIQQTHVPKHRLQITTV 215
           QK GEERGE  NLWKRRS G VLQSLQIQ  H+PKHRLQITT+
Sbjct: 181 QKAGEERGETNNLWKRRSSGTVLQSLQIQPIHIPKHRLQITTI 219

[Close]

BLAST of Carg18243 vs. ExPASy TrEMBL
Match: A0A1S3CD13 (uncharacterized protein LOC103499279 OS=Cucumis melo OX=3656 GN=LOC103499279 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 9.3e-84
Identity = 165/222 (74.32%), Postives = 183/222 (82.43%), Query Frame = 0


Query: 1   MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV 60
           MGD+YNRFNP N+  K++FLPMLCSKPA KD RPPRCDRDR +S S DPLSPRIGCMGQV
Sbjct: 1   MGDKYNRFNPQNVTHKHIFLPMLCSKPAIKDGRPPRCDRDRFDSSSADPLSPRIGCMGQV 60

Query: 61  KRNNRVAGLPISHRILITTKNE------NSPNVGYFKLKKFFSSKNLLASPSPSGTGTTR 120
           KRNNRVAGLPISHRILITTKN       N+PNVGYFKLKKFFSSKNLL SPS + TGT  
Sbjct: 61  KRNNRVAGLPISHRILITTKNAVFSKNGNNPNVGYFKLKKFFSSKNLLGSPSTTRTGTVS 120

Query: 121 S-AAAAASVSTAGVHSCRSRRRPTPDFA-SKKKGVCENGNCESLSVVDLDPPLPVVRRVQ 180
           + +  A S+STAGV+ C SRRR  P+   + KK V ENGNC  L+V+DLDPPLPVVRRVQ
Sbjct: 121 TRSTTAVSISTAGVNGCGSRRRLAPNSGITGKKSVSENGNCGPLNVMDLDPPLPVVRRVQ 180

Query: 181 KGGEERGEMENLWKRRSGGIVLQSLQIQQTHVPKHRLQITTV 215
           K GEE GE ENLWKRRSGGIVL+SL+IQQTH+PKHRLQITTV
Sbjct: 181 KAGEESGETENLWKRRSGGIVLRSLEIQQTHLPKHRLQITTV 222

[Close]

BLAST of Carg18243 vs. TAIR 10
Match: AT1G36940.1 (unknown protein; Has 21 Blast hits to 21 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 122.1 bits (305), Expect = 5.5e-28
Identity = 85/202 (42.08%), Postives = 109/202 (53.96%), Query Frame = 0


Query: 15  QKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQVKRNNRVAGLPISHR 74
           Q+  FLPMLCS+P+ K+   P            DPLSP+I C+GQVKR+N++ G P +  
Sbjct: 12  QRPTFLPMLCSRPSIKNVTLPAKSHQDDSYQQADPLSPKISCIGQVKRSNKITGFPTT-- 71

Query: 75  ILITTKNENSP--NVGYFKLKKFFSSKNLLASPSPSGTGTTRSAAAAASVSTAGVHSCRS 134
              TT    +P     YFKLK+ FS KNL  S S   T TTR++              R 
Sbjct: 72  --TTTSTSITPVAQHRYFKLKRLFSGKNL--SFSAPTTTTTRTS--------------RG 131

Query: 135 RRRPTPDFASKKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEERGEMENLWKRRSGGI 194
           R R   +F +KK  V        + V +LDPPLPVV++   GG      ENLWKRRSGG 
Sbjct: 132 RIR-KEEFGNKKIDV--------IDVAELDPPLPVVKKTHDGGAGDKAAENLWKRRSGGC 182

Query: 195 VLQSLQIQQTHVPKHRLQITTV 215
            L+SLQIQ   V  H+L++TTV
Sbjct: 192 QLRSLQIQTNGV--HQLKVTTV 182

[Close]

BLAST of Carg18243 vs. TAIR 10
Match: AT1G36940.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 7 growth stages. )

HSP 1 Score: 121.7 bits (304), Expect = 7.1e-28
Identity = 84/202 (41.58%), Postives = 109/202 (53.96%), Query Frame = 0


Query: 15  QKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQVKRNNRVAGLPISHR 74
           Q+  FLPMLCS+P+ K+   P            DPLSP+I C+GQVKR+N++ G P +  
Sbjct: 12  QRPTFLPMLCSRPSIKNVTLPAKSHQDDSYQQADPLSPKISCIGQVKRSNKITGFPTT-- 71

Query: 75  ILITTKNENSP--NVGYFKLKKFFSSKNLLASPSPSGTGTTRSAAAAASVSTAGVHSCRS 134
              TT    +P     YFKLK+ FS KNL  S S   T TTR++              R 
Sbjct: 72  --TTTSTSITPVAQHRYFKLKRLFSGKNL--SFSAPTTTTTRTS--------------RG 131

Query: 135 RRRPTPDFASKKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEERGEMENLWKRRSGGI 194
           R R   +F +KK  V        + V +LDPPLPVV++   GG      ENLWKRRSGG 
Sbjct: 132 RIR-KEEFGNKKIDV--------IDVAELDPPLPVVKKTHDGGAGDKAAENLWKRRSGGC 182

Query: 195 VLQSLQIQQTHVPKHRLQITTV 215
            L+SLQIQ   V  H+L++TT+
Sbjct: 192 QLRSLQIQTNGV--HQLKVTTI 182

The following BLAST results are available for this feature:

BLAST of Carg18243 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032751.1	1.6e-117	100.00	hypothetical protein SDJN02_06801, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023542085.1	9.7e-112	95.85	uncharacterized protein LOC111802032 [Cucurbita pepo subsp. pepo]	[more]
XP_022955692.1	2.8e-111	94.93	uncharacterized protein LOC111457614 [Cucurbita moschata]	[more]
KAG6602058.1	2.6e-104	98.00	hypothetical protein SDJN03_07291, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038875349.1	3.3e-91	79.65	uncharacterized protein LOC120067829 [Benincasa hispida]	[more]

BLAST of Carg18243 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg18243 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GUB8	1.4e-111	94.93	uncharacterized protein LOC111457614 OS=Cucurbita moschata OX=3662 GN=LOC1114576...	[more]
A0A6J1JVE8	4.6e-91	80.63	uncharacterized protein LOC111489229 OS=Cucurbita maxima OX=3661 GN=LOC111489229...	[more]
A0A6J1FF48	8.7e-90	79.28	uncharacterized protein LOC111445151 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A6J1CKJ1	5.4e-84	76.68	uncharacterized protein LOC111011846 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A1S3CD13	9.3e-84	74.32	uncharacterized protein LOC103499279 OS=Cucumis melo OX=3656 GN=LOC103499279 PE=...	[more]

BLAST of Carg18243 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G36940.1	5.5e-28	42.08	unknown protein; Has 21 Blast hits to 21 proteins in 8 species: Archae - 0; Bact...	[more]
AT1G36940.2	7.1e-28	41.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..50
None	No IPR available	PANTHER	PTHR36323	MYOTUBULARIN-LIKE PROTEIN	coord: 11..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18243-RA	Carg18243-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006470	protein dephosphorylation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004722	protein serine/threonine phosphatase activity