Carg18210 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18210
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Dof zinc finger protein
Location	Carg_Chr07: 943823 .. 944338 (+)
RNA-Seq Expression	Carg18210
Synteny	Carg18210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAGGTTCACTGTAGCAACACTGGTGGAATTAAGCTCTTTGGCACCGTCATCACTTTACAGACCAGAAGCATCAAGGAGGAGCCGGAGAAAGGTGGTGACGGTGGCGGTGGCGATCAACCAGAGATGAAGAGGCCGGAAAAAATAATTCCATGTCCAAGGTGTAAGAGCATGGACACCAAATTCTGTTACTTCAACAATTACAATGTTAATCAGCCCAGACATTTCTGCAAGGGTTGTCAAAGGTACTGGACGGCAGGTGGGGCGCTACGGAACGTGCCCATCGGAGCCGGCCGCCGGAGAGCCAAGCCGCCGCTGCCTAATTGTCGAATCCTTTCCGGAGAGCTTCCCGAGGATTATGGGCAGCTTTACGATGCTGCTTCTGGGATTATTCATCAGCTTGAATTGGATGCGGTGGAGGGGTGGCATCTCACGGTGGCAGAACAGGATTTCGCCCAAGTTTTCCCTCTCAAACGCCAGAAGATTATCGGTCAACACGGTCAAACGTCCTGA

mRNA sequence

ATGGCTGAGGTTCACTGTAGCAACACTGGTGGAATTAAGCTCTTTGGCACCGTCATCACTTTACAGACCAGAAGCATCAAGGAGGAGCCGGAGAAAGGTGGTGACGGTGGCGGTGGCGATCAACCAGAGATGAAGAGGCCGGAAAAAATAATTCCATGTCCAAGGTGTAAGAGCATGGACACCAAATTCTGTTACTTCAACAATTACAATGTTAATCAGCCCAGACATTTCTGCAAGGGTTGTCAAAGGTACTGGACGGCAGGTGGGGCGCTACGGAACGTGCCCATCGGAGCCGGCCGCCGGAGAGCCAAGCCGCCGCTGCCTAATTGTCGAATCCTTTCCGGAGAGCTTCCCGAGGATTATGGGCAGCTTTACGATGCTGCTTCTGGGATTATTCATCAGCTTGAATTGGATGCGGTGGAGGGGTGGCATCTCACGGTGGCAGAACAGGATTTCGCCCAAGTTTTCCCTCTCAAACGCCAGAAGATTATCGGTCAACACGGTCAAACGTCCTGA

Coding sequence (CDS)

ATGGCTGAGGTTCACTGTAGCAACACTGGTGGAATTAAGCTCTTTGGCACCGTCATCACTTTACAGACCAGAAGCATCAAGGAGGAGCCGGAGAAAGGTGGTGACGGTGGCGGTGGCGATCAACCAGAGATGAAGAGGCCGGAAAAAATAATTCCATGTCCAAGGTGTAAGAGCATGGACACCAAATTCTGTTACTTCAACAATTACAATGTTAATCAGCCCAGACATTTCTGCAAGGGTTGTCAAAGGTACTGGACGGCAGGTGGGGCGCTACGGAACGTGCCCATCGGAGCCGGCCGCCGGAGAGCCAAGCCGCCGCTGCCTAATTGTCGAATCCTTTCCGGAGAGCTTCCCGAGGATTATGGGCAGCTTTACGATGCTGCTTCTGGGATTATTCATCAGCTTGAATTGGATGCGGTGGAGGGGTGGCATCTCACGGTGGCAGAACAGGATTTCGCCCAAGTTTTCCCTCTCAAACGCCAGAAGATTATCGGTCAACACGGTCAAACGTCCTGA

Protein sequence

MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDYGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS

Homology

[Close]

BLAST of Carg18210 vs. NCBI nr
Match: XP_022926649.1 (dof zinc finger protein DOF1.5-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 369.8 bits (948), Expect = 1.3e-98
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD 60
           MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD
Sbjct: 52  MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD 111

Query: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120
           TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED
Sbjct: 112 TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 171

Query: 121 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 172
           YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS
Sbjct: 172 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 222

[Close]

BLAST of Carg18210 vs. NCBI nr
Match: XP_022926650.1 (dof zinc finger protein DOF1.5-like isoform X2 [Cucurbita moschata] >KAG6594548.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026525.1 Dof zinc finger protein DOF1.5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 369.8 bits (948), Expect = 1.3e-98
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD 60
           MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD
Sbjct: 1   MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD 60

Query: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120
           TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED
Sbjct: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120

Query: 121 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 172
           YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS
Sbjct: 121 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 171

[Close]

BLAST of Carg18210 vs. NCBI nr
Match: XP_023517358.1 (dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.1 bits (915), Expect = 8.7e-95
Identity = 167/171 (97.66%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD 60
           MAEVHCSNTGGIKLFGTVI LQTRSIKEEPEKG  GGGGDQPEMKRPEKIIPCPRCKSMD
Sbjct: 1   MAEVHCSNTGGIKLFGTVINLQTRSIKEEPEKG--GGGGDQPEMKRPEKIIPCPRCKSMD 60

Query: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120
           TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED
Sbjct: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120

Query: 121 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 172
           YGQLYDAASGIIHQLELDAVEGWH TVAEQDFAQVFPLKRQKIIGQHGQTS
Sbjct: 121 YGQLYDAASGIIHQLELDAVEGWHFTVAEQDFAQVFPLKRQKIIGQHGQTS 169

[Close]

BLAST of Carg18210 vs. NCBI nr
Match: XP_023003299.1 (dof zinc finger protein DOF1.5-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 352.1 bits (902), Expect = 2.8e-93
Identity = 167/171 (97.66%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD 60
           MAEVHCSN GGIKLFGTVITLQTRSIKEEPEKGG GGGGDQPEMKRPEKIIPCPRCKSMD
Sbjct: 56  MAEVHCSNAGGIKLFGTVITLQTRSIKEEPEKGG-GGGGDQPEMKRPEKIIPCPRCKSMD 115

Query: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120
           TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED
Sbjct: 116 TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 175

Query: 121 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 172
           YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKI  QHGQTS
Sbjct: 176 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKI--QHGQTS 223

[Close]

BLAST of Carg18210 vs. NCBI nr
Match: XP_023003300.1 (dof zinc finger protein DOF1.5-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 352.1 bits (902), Expect = 2.8e-93
Identity = 167/171 (97.66%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD 60
           MAEVHCSN GGIKLFGTVITLQTRSIKEEPEKGG GGGGDQPEMKRPEKIIPCPRCKSMD
Sbjct: 1   MAEVHCSNAGGIKLFGTVITLQTRSIKEEPEKGG-GGGGDQPEMKRPEKIIPCPRCKSMD 60

Query: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120
           TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED
Sbjct: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120

Query: 121 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 172
           YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKI  QHGQTS
Sbjct: 121 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKI--QHGQTS 168

[Close]

BLAST of Carg18210 vs. ExPASy Swiss-Prot
Match: P68350 (Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.3e-40
Identity = 89/167 (53.29%), Postives = 107/167 (64.07%), Query Frame = 0


Query: 11  GIKLFGTVITLQ---TRSIKEEPEKGGD-----------GGGGDQPEMKRPEKIIPCPRC 70
           GIKLFG  IT     T++IK+E ++                  D    KRP+KIIPCPRC
Sbjct: 8   GIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKIIPCPRC 67

Query: 71  KSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGE 130
           KSM+TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRR++KPP        G 
Sbjct: 68  KSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPP--------GR 127

Query: 131 LPEDYGQLYDAASGIIHQLELDA--VEGWH-LTVAEQDFAQVFPLKR 161
           +   + +L  AA+G + Q+ELDA  VE W   T +   F   FP+KR
Sbjct: 128 V-GGFAELLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKR 165

[Close]

BLAST of Carg18210 vs. ExPASy Swiss-Prot
Match: O22967 (Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.0e-37
Identity = 86/165 (52.12%), Postives = 99/165 (60.00%), Query Frame = 0


Query: 11  GIKLFGTVITLQTRSIKEE-----PEKGG-----DGGGGDQPEMKRPEKIIPCPRCKSMD 70
           GIKLFG  I   TR+IK E     PE+            D    KRP+KII CPRCKSM+
Sbjct: 8   GIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRCKSME 67

Query: 71  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 130
           TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVP+GAGRR++KPP    R++ G L + 
Sbjct: 68  TKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPP---GRVVVGMLGDG 127

Query: 131 YGQLYDAASGIIHQLELD---AVEGWH--LTVAEQDFAQVFPLKR 161
            G         + Q+EL     VE W      A   F   FP+KR
Sbjct: 128 NG---------VRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKR 160

[Close]

BLAST of Carg18210 vs. ExPASy Swiss-Prot
Match: Q93ZL5 (Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-29
Identity = 59/100 (59.00%), Postives = 73/100 (73.00%), Query Frame = 0


Query: 7   SNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMDTKFCYF 66
           + T GI    T  T  T++ K   E GG      + ++K+P+KI+PCPRC SM+TKFCY+
Sbjct: 99  TTTSGI----TEKTETTKAAKTNEESGGT-ACSQEGKLKKPDKILPCPRCNSMETKFCYY 158

Query: 67  NNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPP 107
           NNYNVNQPRHFCK CQRYWTAGG +RNVP+GAGRR+ K P
Sbjct: 159 NNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKSP 193

[Close]

BLAST of Carg18210 vs. ExPASy Swiss-Prot
Match: Q8W1E3 (Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2)

HSP 1 Score: 129.4 bits (324), Expect = 3.8e-29
Identity = 65/125 (52.00%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 12  IKLFGTVITLQT--RSIKEEPEKGGDGGGGDQPE----MKRPEKIIPCPRCKSMDTKFCY 71
           IKLFG  I   T      EE EK  +    DQ E    +K+P KI+PCPRC SM+TKFCY
Sbjct: 9   IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCY 68

Query: 72  FNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDYGQLY 131
           +NNYNVNQPRHFCK CQRYWT+GG +R+VPIGAGRR+ K   P        + E  G + 
Sbjct: 69  YNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISETNGPVL 128

[Close]

BLAST of Carg18210 vs. ExPASy Swiss-Prot
Match: Q8LFV3 (Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 9.5e-28
Identity = 49/65 (75.38%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 40  DQPEMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAG 99
           D   +K+P KI+PCPRCKSM+TKFCY+NNYN+NQPRHFCK CQRYWTAGG +RNVP+GAG
Sbjct: 99  DGKTLKKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAG 158

Query: 100 RRRAK 105
           RR+ K
Sbjct: 159 RRKNK 163

[Close]

BLAST of Carg18210 vs. ExPASy TrEMBL
Match: A0A6J1ELQ8 (dof zinc finger protein DOF1.5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433719 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 6.2e-99
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD 60
           MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD
Sbjct: 1   MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD 60

Query: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120
           TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED
Sbjct: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120

Query: 121 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 172
           YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS
Sbjct: 121 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 171

[Close]

BLAST of Carg18210 vs. ExPASy TrEMBL
Match: A0A6J1EFS0 (dof zinc finger protein DOF1.5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433719 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 6.2e-99
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD 60
           MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD
Sbjct: 52  MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD 111

Query: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120
           TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED
Sbjct: 112 TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 171

Query: 121 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 172
           YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS
Sbjct: 172 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 222

[Close]

BLAST of Carg18210 vs. ExPASy TrEMBL
Match: A0A6J1KSX6 (dof zinc finger protein DOF1.5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496951 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.3e-93
Identity = 167/171 (97.66%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD 60
           MAEVHCSN GGIKLFGTVITLQTRSIKEEPEKGG GGGGDQPEMKRPEKIIPCPRCKSMD
Sbjct: 56  MAEVHCSNAGGIKLFGTVITLQTRSIKEEPEKGG-GGGGDQPEMKRPEKIIPCPRCKSMD 115

Query: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120
           TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED
Sbjct: 116 TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 175

Query: 121 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 172
           YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKI  QHGQTS
Sbjct: 176 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKI--QHGQTS 223

[Close]

BLAST of Carg18210 vs. ExPASy TrEMBL
Match: A0A6J1KRE2 (dof zinc finger protein DOF1.5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496951 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.3e-93
Identity = 167/171 (97.66%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMD 60
           MAEVHCSN GGIKLFGTVITLQTRSIKEEPEKGG GGGGDQPEMKRPEKIIPCPRCKSMD
Sbjct: 1   MAEVHCSNAGGIKLFGTVITLQTRSIKEEPEKGG-GGGGDQPEMKRPEKIIPCPRCKSMD 60

Query: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120
           TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED
Sbjct: 61  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 120

Query: 121 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 172
           YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKI  QHGQTS
Sbjct: 121 YGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKI--QHGQTS 168

[Close]

BLAST of Carg18210 vs. ExPASy TrEMBL
Match: A0A6J1ILZ6 (dof zinc finger protein DOF1.5-like OS=Cucurbita maxima OX=3661 GN=LOC111478624 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 4.6e-86
Identity = 153/174 (87.93%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGG---GDQPEMKRPEKIIPCPRCK 60
           MA+VH S TGGIKLFGT+I LQTR +K++PEKGG GGG   GDQ EMKRPEKIIPCPRCK
Sbjct: 48  MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK 107

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGEL 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPP PNCR LSGE+
Sbjct: 108 SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPP-PNCRTLSGEM 167

Query: 121 PEDYGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 172
           P+DYGQLYDAASGIIHQLELDAVEGWHL VAEQDF QVFPLKRQKIIGQ+GQTS
Sbjct: 168 PDDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 220

[Close]

BLAST of Carg18210 vs. TAIR 10
Match: AT1G29160.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 164.9 bits (416), Expect = 5.9e-41
Identity = 89/167 (53.29%), Postives = 107/167 (64.07%), Query Frame = 0


Query: 11  GIKLFGTVITLQ---TRSIKEEPEKGGD-----------GGGGDQPEMKRPEKIIPCPRC 70
           GIKLFG  IT     T++IK+E ++                  D    KRP+KIIPCPRC
Sbjct: 8   GIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKIIPCPRC 67

Query: 71  KSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGE 130
           KSM+TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRR++KPP        G 
Sbjct: 68  KSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPP--------GR 127

Query: 131 LPEDYGQLYDAASGIIHQLELDA--VEGWH-LTVAEQDFAQVFPLKR 161
           +   + +L  AA+G + Q+ELDA  VE W   T +   F   FP+KR
Sbjct: 128 V-GGFAELLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKR 165

[Close]

BLAST of Carg18210 vs. TAIR 10
Match: AT2G34140.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 155.6 bits (392), Expect = 3.6e-38
Identity = 86/165 (52.12%), Postives = 99/165 (60.00%), Query Frame = 0


Query: 11  GIKLFGTVITLQTRSIKEE-----PEKGG-----DGGGGDQPEMKRPEKIIPCPRCKSMD 70
           GIKLFG  I   TR+IK E     PE+            D    KRP+KII CPRCKSM+
Sbjct: 8   GIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRCKSME 67

Query: 71  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPED 130
           TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVP+GAGRR++KPP    R++ G L + 
Sbjct: 68  TKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPP---GRVVVGMLGDG 127

Query: 131 YGQLYDAASGIIHQLELD---AVEGWH--LTVAEQDFAQVFPLKR 161
            G         + Q+EL     VE W      A   F   FP+KR
Sbjct: 128 NG---------VRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKR 160

[Close]

BLAST of Carg18210 vs. TAIR 10
Match: AT5G39660.1 (cycling DOF factor 2 )

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 59/100 (59.00%), Postives = 73/100 (73.00%), Query Frame = 0


Query: 7   SNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMDTKFCYF 66
           + T GI    T  T  T++ K   E GG      + ++K+P+KI+PCPRC SM+TKFCY+
Sbjct: 99  TTTSGI----TEKTETTKAAKTNEESGGT-ACSQEGKLKKPDKILPCPRCNSMETKFCYY 158

Query: 67  NNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPP 107
           NNYNVNQPRHFCK CQRYWTAGG +RNVP+GAGRR+ K P
Sbjct: 159 NNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKSP 193

[Close]

BLAST of Carg18210 vs. TAIR 10
Match: AT5G39660.2 (cycling DOF factor 2 )

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 59/100 (59.00%), Postives = 73/100 (73.00%), Query Frame = 0


Query: 7   SNTGGIKLFGTVITLQTRSIKEEPEKGGDGGGGDQPEMKRPEKIIPCPRCKSMDTKFCYF 66
           + T GI    T  T  T++ K   E GG      + ++K+P+KI+PCPRC SM+TKFCY+
Sbjct: 99  TTTSGI----TEKTETTKAAKTNEESGGT-ACSQEGKLKKPDKILPCPRCNSMETKFCYY 158

Query: 67  NNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPP 107
           NNYNVNQPRHFCK CQRYWTAGG +RNVP+GAGRR+ K P
Sbjct: 159 NNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKSP 193

[Close]

BLAST of Carg18210 vs. TAIR 10
Match: AT5G62430.1 (cycling DOF factor 1 )

HSP 1 Score: 129.4 bits (324), Expect = 2.7e-30
Identity = 65/125 (52.00%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 12  IKLFGTVITLQT--RSIKEEPEKGGDGGGGDQPE----MKRPEKIIPCPRCKSMDTKFCY 71
           IKLFG  I   T      EE EK  +    DQ E    +K+P KI+PCPRC SM+TKFCY
Sbjct: 9   IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCY 68

Query: 72  FNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGELPEDYGQLY 131
           +NNYNVNQPRHFCK CQRYWT+GG +R+VPIGAGRR+ K   P        + E  G + 
Sbjct: 69  YNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISETNGPVL 128

The following BLAST results are available for this feature:

BLAST of Carg18210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926649.1	1.3e-98	100.00	dof zinc finger protein DOF1.5-like isoform X1 [Cucurbita moschata]	[more]
XP_022926650.1	1.3e-98	100.00	dof zinc finger protein DOF1.5-like isoform X2 [Cucurbita moschata] >KAG6594548....	[more]
XP_023517358.1	8.7e-95	97.66	dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo]	[more]
XP_023003299.1	2.8e-93	97.66	dof zinc finger protein DOF1.5-like isoform X1 [Cucurbita maxima]	[more]
XP_023003300.1	2.8e-93	97.66	dof zinc finger protein DOF1.5-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg18210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P68350	8.3e-40	53.29	Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV...	[more]
O22967	5.0e-37	52.12	Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1	[more]
Q93ZL5	1.7e-29	59.00	Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2	[more]
Q8W1E3	3.8e-29	52.00	Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2	[more]
Q8LFV3	9.5e-28	75.38	Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2	[more]

BLAST of Carg18210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ELQ8	6.2e-99	100.00	dof zinc finger protein DOF1.5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1EFS0	6.2e-99	100.00	dof zinc finger protein DOF1.5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KSX6	1.3e-93	97.66	dof zinc finger protein DOF1.5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1KRE2	1.3e-93	97.66	dof zinc finger protein DOF1.5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1ILZ6	4.6e-86	87.93	dof zinc finger protein DOF1.5-like OS=Cucurbita maxima OX=3661 GN=LOC111478624 ...	[more]

BLAST of Carg18210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29160.1	5.9e-41	53.29	Dof-type zinc finger DNA-binding family protein	[more]
AT2G34140.1	3.6e-38	52.12	Dof-type zinc finger DNA-binding family protein	[more]
AT5G39660.1	1.2e-30	59.00	cycling DOF factor 2	[more]
AT5G39660.2	1.2e-30	59.00	cycling DOF factor 2	[more]
AT5G62430.1	2.7e-30	52.00	cycling DOF factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 49..104 e-value: 1.1E-31 score: 108.7
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 53..89
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 51..105 score: 28.238934
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..47
None	No IPR available	PANTHER	PTHR31089	CYCLIC DOF FACTOR 2	coord: 8..164
None	No IPR available	PANTHER	PTHR31089:SF49	DOF ZINC FINGER PROTEIN DOF1.5-LIKE	coord: 8..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18210-RA	Carg18210-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity