Homology
BLAST of Carg18204 vs. NCBI nr
Match:
KAG7021531.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 405.6 bits (1041), Expect = 2.4e-109
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0
Query: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQSVVMYCC 60
MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQSVVMYCC
Sbjct: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQSVVMYCC 60
Query: 61 HVWGTGLWTTWLIPDRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPK 120
HVWGTGLWTTWLIPDRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPK
Sbjct: 61 HVWGTGLWTTWLIPDRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPK 120
Query: 121 LCRGGDFEMGRQLWEEAMAMGLKLGCSVRFSSQQERFIAKFLRNTTEAEKQNEAATDKTI 180
LCRGGDFEMGRQLWEEAMAMGLKLGCSVRFSSQQERFIAKFLRNTTEAEKQNEAATDKTI
Sbjct: 121 LCRGGDFEMGRQLWEEAMAMGLKLGCSVRFSSQQERFIAKFLRNTTEAEKQNEAATDKTI 180
Query: 181 AMGKRRDEVEERAVG 196
AMGKRRDEVEERAVG
Sbjct: 181 AMGKRRDEVEERAVG 195
BLAST of Carg18204 vs. NCBI nr
Match:
KAG6587555.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 270.0 bits (689), Expect = 1.6e-68
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
Query: 64 GTGLWTTWLIPDRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPKLCR 123
GTGLWTTWLIPDRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPKLCR
Sbjct: 85 GTGLWTTWLIPDRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPKLCR 144
Query: 124 GGDFEMGRQLWEEAMAMGLKLGCSVRFSSQQERFIAKFLRNTTEAEKQNEAATDKTIAMG 183
GGDFEMGRQLWEEAMAMGLKLGCSVRFSSQQERFIAKFLRNTTEAEKQNEAATDKTIAMG
Sbjct: 145 GGDFEMGRQLWEEAMAMGLKLGCSVRFSSQQERFIAKFLRNTTEAEKQNEAATDKTIAMG 204
Query: 184 KRRDEVEERAVG 196
KRRDEVEERAVG
Sbjct: 205 KRRDEVEERAVG 216
BLAST of Carg18204 vs. NCBI nr
Match:
XP_023516447.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 233.8 bits (595), Expect = 1.3e-57
Identity = 133/239 (55.65%), Postives = 150/239 (62.76%), Query Frame = 0
Query: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQS--VVMY 60
MKSDGTMPDLF +NT LRCLC+ NLKKNPSGLVPEALNVMMEMRSY IAPNS S +++
Sbjct: 254 MKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYNIAPNSISYNILLS 313
Query: 61 C----------CHV----------------------------WGTG------LWTTWLIP 120
C C + +G G + LIP
Sbjct: 314 CLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIP 373
Query: 121 DRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPKLCRGGDFEMGRQLW 180
DRKFY+DLIGILCG E YALELFEKMKRSSLGGY PVYDVLIPKLCRGGDFEMGRQLW
Sbjct: 374 DRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLW 433
Query: 181 EEAMAMGLKLGCS--------VRFSSQQERFIAKFLRNTTEAEKQNEAATDKTIAMGKR 186
EEAMAMGL L CS + + + L ++ AEKQN+AATDK+ A GK+
Sbjct: 434 EEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQGLEESSRAEKQNKAATDKSKARGKK 492
BLAST of Carg18204 vs. NCBI nr
Match:
KAG6589519.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 233.0 bits (593), Expect = 2.1e-57
Identity = 134/239 (56.07%), Postives = 149/239 (62.34%), Query Frame = 0
Query: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQS--VVMY 60
MKSDGTMPDLF YNT LRCL + NLKKNPSGLVPEALNVMMEMRSY IAPNS S +++
Sbjct: 254 MKSDGTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLS 313
Query: 61 C----------CHV----------------------------WGTG------LWTTWLIP 120
C C + +G G + LIP
Sbjct: 314 CLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIP 373
Query: 121 DRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPKLCRGGDFEMGRQLW 180
DRKFY+DLIGILCG E YALELFEKMKRSSLGGY PVYDVLIPKLCRGGDFEMGRQLW
Sbjct: 374 DRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLW 433
Query: 181 EEAMAMGLKLGCS--------VRFSSQQERFIAKFLRNTTEAEKQNEAATDKTIAMGKR 186
EEAMAMGL L CS + + + L ++ AEKQN+AATDK+ A GKR
Sbjct: 434 EEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQNKAATDKSKARGKR 492
BLAST of Carg18204 vs. NCBI nr
Match:
XP_022921576.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita moschata])
HSP 1 Score: 233.0 bits (593), Expect = 2.1e-57
Identity = 134/239 (56.07%), Postives = 149/239 (62.34%), Query Frame = 0
Query: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQS--VVMY 60
MKSDGTMPDLF YNT LRCL + NLKKNPSGLVPEALNVMMEMRSY IAPNS S +++
Sbjct: 254 MKSDGTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLS 313
Query: 61 C----------CHV----------------------------WGTG------LWTTWLIP 120
C C + +G G + LIP
Sbjct: 314 CLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIP 373
Query: 121 DRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPKLCRGGDFEMGRQLW 180
DRKFY+DLIGILCG E YALELFEKMKRSSLGGY PVYDVLIPKLCRGGDFEMGRQLW
Sbjct: 374 DRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLW 433
Query: 181 EEAMAMGLKLGCS--------VRFSSQQERFIAKFLRNTTEAEKQNEAATDKTIAMGKR 186
EEAMAMGL L CS + + + L ++ AEKQN+AATDK+ A GKR
Sbjct: 434 EEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQNKAATDKSKARGKR 492
BLAST of Carg18204 vs. ExPASy Swiss-Prot
Match:
Q9FLJ6 (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61370 PE=2 SV=1)
HSP 1 Score: 179.5 bits (454), Expect = 3.7e-44
Identity = 96/226 (42.48%), Postives = 127/226 (56.19%), Query Frame = 0
Query: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQSV----- 60
MKS G PDLFC+N+ L CLC+ N+ +NPSGLVPEALN+M+EMRSY I P S S
Sbjct: 234 MKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLS 293
Query: 61 -----------------------------------VMYCCHVWGTG------LWTTWLIP 120
V+Y +G G + P
Sbjct: 294 CLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP 353
Query: 121 DRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPKLCRGGDFEMGRQLW 180
+RKFY+DLIG+LCG ER ++AL+LFEKMKRSS+GGY VYD+LIPKLC+GG+FE GR+LW
Sbjct: 354 ERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELW 413
BLAST of Carg18204 vs. ExPASy Swiss-Prot
Match:
Q9FME4 (Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PNM1 PE=1 SV=1)
HSP 1 Score: 60.5 bits (145), Expect = 2.5e-08
Identity = 53/225 (23.56%), Postives = 89/225 (39.56%), Query Frame = 0
Query: 13 YNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQS---VVMYCCHVWGT---- 72
YN L C+CK KK+P L PE V++EM + N+++ ++ C + T
Sbjct: 283 YNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAM 342
Query: 73 ------GLW------TTWLI-----------------------------PDRKFYFDLIG 132
G W T+L+ ++K Y+ +
Sbjct: 343 TLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLK 402
Query: 133 ILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLKL 190
ILCG ER +A+ +F+ MK + YD+L+ K+C L++EA G+ +
Sbjct: 403 ILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAV 462
BLAST of Carg18204 vs. ExPASy Swiss-Prot
Match:
Q9M302 (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX=3702 GN=At3g48810 PE=2 SV=1)
HSP 1 Score: 52.8 bits (125), Expect = 5.2e-06
Identity = 47/172 (27.33%), Postives = 63/172 (36.63%), Query Frame = 0
Query: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQSVVMYCC 60
MK DG P++F YN L+ LCK+N V A +++EM + P++ S
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNN-------KVDGAKKLLVEMSNKGCCPDAVSYTTVIS 231
Query: 61 HVWGTGL------WTTWLIPDRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVY 120
+ GL P Y LI LC A EL +M + Y
Sbjct: 232 SMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISY 291
Query: 121 DVLIPKLCRGGDFEMGRQLWEEAMAMGLKLGCSVRFSSQQERFIAKFLRNTT 167
LI LC G E+ + LK GC + FLR TT
Sbjct: 292 STLINVLCNSGQIELAFSF----LTQMLKRGCHPNIYTLSSLVKGCFLRGTT 332
BLAST of Carg18204 vs. ExPASy Swiss-Prot
Match:
Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)
HSP 1 Score: 48.9 bits (115), Expect = 7.5e-05
Identity = 39/152 (25.66%), Postives = 60/152 (39.47%), Query Frame = 0
Query: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQSVVMYCC 60
M S G PD+F YNT +R +CK G+V A ++ + P+ S +
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCK-------EGMVDRAFEMVRNLELKGCEPDVISYNILLR 313
Query: 61 HVWGTGLW-----------TTWLIPDRKFYFDLIGILCGAERASYALELFEKMKRSSLGG 120
+ G W + P+ Y LI LC + A+ L + MK L
Sbjct: 314 ALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 373
Query: 121 YSPVYDVLIPKLCRGGDFEMGRQLWEEAMAMG 142
+ YD LI CR G ++ + E ++ G
Sbjct: 374 DAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
BLAST of Carg18204 vs. ExPASy Swiss-Prot
Match:
Q9CAN6 (Pentatricopeptide repeat-containing protein At1g63070, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63070 PE=2 SV=1)
HSP 1 Score: 48.1 bits (113), Expect = 1.3e-04
Identity = 32/147 (21.77%), Postives = 68/147 (46.26%), Query Frame = 0
Query: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEAL--NV---MMEMRSYMIAPNSQSV 60
M++ G PD+F YN + CLC + + S L+ + L N+ ++ + + A +
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 61 VMYCCHVWGTGLWTTWLIPDRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYD 120
++ ++ + + PD Y LI C +R +E+F +M + L G + Y
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Query: 121 VLIPKLCRGGDFEMGRQLWEEAMAMGL 143
LI + D + + ++++ ++ G+
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGV 422
BLAST of Carg18204 vs. ExPASy TrEMBL
Match:
A0A6J1E1S0 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111429800 PE=4 SV=1)
HSP 1 Score: 233.0 bits (593), Expect = 1.0e-57
Identity = 134/239 (56.07%), Postives = 149/239 (62.34%), Query Frame = 0
Query: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQS--VVMY 60
MKSDGTMPDLF YNT LRCL + NLKKNPSGLVPEALNVMMEMRSY IAPNS S +++
Sbjct: 254 MKSDGTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLS 313
Query: 61 C----------CHV----------------------------WGTG------LWTTWLIP 120
C C + +G G + LIP
Sbjct: 314 CLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIP 373
Query: 121 DRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPKLCRGGDFEMGRQLW 180
DRKFY+DLIGILCG E YALELFEKMKRSSLGGY PVYDVLIPKLCRGGDFEMGRQLW
Sbjct: 374 DRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLW 433
Query: 181 EEAMAMGLKLGCS--------VRFSSQQERFIAKFLRNTTEAEKQNEAATDKTIAMGKR 186
EEAMAMGL L CS + + + L ++ AEKQN+AATDK+ A GKR
Sbjct: 434 EEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQNKAATDKSKARGKR 492
BLAST of Carg18204 vs. ExPASy TrEMBL
Match:
A0A6J1BYQ1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111006837 PE=4 SV=1)
HSP 1 Score: 231.9 bits (590), Expect = 2.3e-57
Identity = 132/240 (55.00%), Postives = 148/240 (61.67%), Query Frame = 0
Query: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQS--VVMY 60
MKSDG MPDLFCYNT LRCLC+ NLKKNPSGLVPEALNVMMEMRSY I+PNS S +++
Sbjct: 247 MKSDGAMPDLFCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSISYNILLS 306
Query: 61 C----------CHVWGT----GLWTTW------------------------------LIP 120
C C + T G W LIP
Sbjct: 307 CLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMIDEGLIP 366
Query: 121 DRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPKLCRGGDFEMGRQLW 180
D KFY+DLIGILCG ER +YALE+ +KMKRSSLGGY PVYDVLIPKLCRGGDFEMGRQLW
Sbjct: 367 DXKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLW 426
Query: 181 EEAMAMGLKLGCS--------VRFSSQQERFIAKFLRNTTEAEKQNE-AATDKTIAMGKR 186
EEAMAMGLKL CS + + +K L AEKQN+ AATD+ A GK+
Sbjct: 427 EEAMAMGLKLRCSREVLDPSITKVWLPTRKTDSKILEEVNGAEKQNQAAATDRPKAKGKK 486
BLAST of Carg18204 vs. ExPASy TrEMBL
Match:
A0A6J1JIV3 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484976 PE=4 SV=1)
HSP 1 Score: 231.1 bits (588), Expect = 4.0e-57
Identity = 132/239 (55.23%), Postives = 147/239 (61.51%), Query Frame = 0
Query: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQS--VVMY 60
MKSDGTMPDLF YNT LRCLC+ NLKKNPSGLVPEALNVMMEMRSY IAPNS S +++
Sbjct: 254 MKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSISYNILLS 313
Query: 61 C----------CHV----------------------------WGTG------LWTTWLIP 120
C C + +G G + LIP
Sbjct: 314 CLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMIEEGLIP 373
Query: 121 DRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPKLCRGGDFEMGRQLW 180
DRKFY+DLIGILCG ER YALELFEKMKRSSLGGY PVYDVLIPKLC GGDFEMGRQLW
Sbjct: 374 DRKFYYDLIGILCGVEREKYALELFEKMKRSSLGGYGPVYDVLIPKLCSGGDFEMGRQLW 433
Query: 181 EEAMAMGLKLGCS--------VRFSSQQERFIAKFLRNTTEAEKQNEAATDKTIAMGKR 186
EAMAMG+ L CS + + + L AEKQN+AATDK+ A GK+
Sbjct: 434 GEAMAMGITLRCSSDVLDPSITKVFKPTRKIDNQNLEECNRAEKQNKAATDKSKARGKK 492
BLAST of Carg18204 vs. ExPASy TrEMBL
Match:
A0A0A0LPF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009920 PE=4 SV=1)
HSP 1 Score: 223.4 bits (568), Expect = 8.2e-55
Identity = 123/232 (53.02%), Postives = 144/232 (62.07%), Query Frame = 0
Query: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQS--VVMY 60
MKSDGTMPDLFCYNT L+CLC+ N++KNPSGLVPE+LNVMMEMRSY I+PNS S +++
Sbjct: 247 MKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSISYNILLS 306
Query: 61 C----------CHV----------------------------WGTG------LWTTWLIP 120
C C + +G G + L P
Sbjct: 307 CLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMIEEGLTP 366
Query: 121 DRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPKLCRGGDFEMGRQLW 179
DRKFY+DLIGILCG ER +YALELFEKMKRSSLGGY PVYDVLIPKLCRGG+FEMGRQLW
Sbjct: 367 DRKFYYDLIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFEMGRQLW 426
BLAST of Carg18204 vs. ExPASy TrEMBL
Match:
A0A5A7US52 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002610 PE=4 SV=1)
HSP 1 Score: 219.9 bits (559), Expect = 9.1e-54
Identity = 122/232 (52.59%), Postives = 143/232 (61.64%), Query Frame = 0
Query: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQS--VVMY 60
MKSDGTMPDLF YNT L+CLC+ N++KNPSGLVPEALNVMMEMRSY IAPNS S +++
Sbjct: 247 MKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSISYNILLS 306
Query: 61 C----------CHV----------------------------WGTG------LWTTWLIP 120
C C + +G G + L P
Sbjct: 307 CLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMIEEGLTP 366
Query: 121 DRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPKLCRGGDFEMGRQLW 179
DRKFY++LIGILCG ER +YA+ELFEKMKRSSLGGY PVYDVLIPK+CRGGDFEMGRQLW
Sbjct: 367 DRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFEMGRQLW 426
BLAST of Carg18204 vs. TAIR 10
Match:
AT5G61370.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 179.5 bits (454), Expect = 2.6e-45
Identity = 96/226 (42.48%), Postives = 127/226 (56.19%), Query Frame = 0
Query: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQSV----- 60
MKS G PDLFC+N+ L CLC+ N+ +NPSGLVPEALN+M+EMRSY I P S S
Sbjct: 234 MKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLS 293
Query: 61 -----------------------------------VMYCCHVWGTG------LWTTWLIP 120
V+Y +G G + P
Sbjct: 294 CLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP 353
Query: 121 DRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPKLCRGGDFEMGRQLW 180
+RKFY+DLIG+LCG ER ++AL+LFEKMKRSS+GGY VYD+LIPKLC+GG+FE GR+LW
Sbjct: 354 ERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELW 413
BLAST of Carg18204 vs. TAIR 10
Match:
AT5G60960.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 60.5 bits (145), Expect = 1.8e-09
Identity = 53/225 (23.56%), Postives = 89/225 (39.56%), Query Frame = 0
Query: 13 YNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQS---VVMYCCHVWGT---- 72
YN L C+CK KK+P L PE V++EM + N+++ ++ C + T
Sbjct: 283 YNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAM 342
Query: 73 ------GLW------TTWLI-----------------------------PDRKFYFDLIG 132
G W T+L+ ++K Y+ +
Sbjct: 343 TLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLK 402
Query: 133 ILCGAERASYALELFEKMKRSSLGGYSPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLKL 190
ILCG ER +A+ +F+ MK + YD+L+ K+C L++EA G+ +
Sbjct: 403 ILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAV 462
BLAST of Carg18204 vs. TAIR 10
Match:
AT3G48810.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 52.8 bits (125), Expect = 3.7e-07
Identity = 47/172 (27.33%), Postives = 63/172 (36.63%), Query Frame = 0
Query: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQSVVMYCC 60
MK DG P++F YN L+ LCK+N V A +++EM + P++ S
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNN-------KVDGAKKLLVEMSNKGCCPDAVSYTTVIS 231
Query: 61 HVWGTGL------WTTWLIPDRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVY 120
+ GL P Y LI LC A EL +M + Y
Sbjct: 232 SMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISY 291
Query: 121 DVLIPKLCRGGDFEMGRQLWEEAMAMGLKLGCSVRFSSQQERFIAKFLRNTT 167
LI LC G E+ + LK GC + FLR TT
Sbjct: 292 STLINVLCNSGQIELAFSF----LTQMLKRGCHPNIYTLSSLVKGCFLRGTT 332
BLAST of Carg18204 vs. TAIR 10
Match:
AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 48.9 bits (115), Expect = 5.4e-06
Identity = 39/152 (25.66%), Postives = 60/152 (39.47%), Query Frame = 0
Query: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEALNVMMEMRSYMIAPNSQSVVMYCC 60
M S G PD+F YNT +R +CK G+V A ++ + P+ S +
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCK-------EGMVDRAFEMVRNLELKGCEPDVISYNILLR 313
Query: 61 HVWGTGLW-----------TTWLIPDRKFYFDLIGILCGAERASYALELFEKMKRSSLGG 120
+ G W + P+ Y LI LC + A+ L + MK L
Sbjct: 314 ALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 373
Query: 121 YSPVYDVLIPKLCRGGDFEMGRQLWEEAMAMG 142
+ YD LI CR G ++ + E ++ G
Sbjct: 374 DAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
BLAST of Carg18204 vs. TAIR 10
Match:
AT1G63070.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 48.1 bits (113), Expect = 9.1e-06
Identity = 32/147 (21.77%), Postives = 68/147 (46.26%), Query Frame = 0
Query: 1 MKSDGTMPDLFCYNTSLRCLCKHNLKKNPSGLVPEAL--NV---MMEMRSYMIAPNSQSV 60
M++ G PD+F YN + CLC + + S L+ + L N+ ++ + + A +
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 61 VMYCCHVWGTGLWTTWLIPDRKFYFDLIGILCGAERASYALELFEKMKRSSLGGYSPVYD 120
++ ++ + + PD Y LI C +R +E+F +M + L G + Y
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Query: 121 VLIPKLCRGGDFEMGRQLWEEAMAMGL 143
LI + D + + ++++ ++ G+
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGV 422
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7021531.1 | 2.4e-109 | 100.00 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
KAG6587555.1 | 1.6e-68 | 100.00 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_023516447.1 | 1.3e-57 | 55.65 | pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita ... | [more] |
KAG6589519.1 | 2.1e-57 | 56.07 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022921576.1 | 2.1e-57 | 56.07 | pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
Q9FLJ6 | 3.7e-44 | 42.48 | Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidop... | [more] |
Q9FME4 | 2.5e-08 | 23.56 | Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis t... | [more] |
Q9M302 | 5.2e-06 | 27.33 | Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana OX... | [more] |
Q9SR00 | 7.5e-05 | 25.66 | Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... | [more] |
Q9CAN6 | 1.3e-04 | 21.77 | Pentatricopeptide repeat-containing protein At1g63070, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E1S0 | 1.0e-57 | 56.07 | pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbit... | [more] |
A0A6J1BYQ1 | 2.3e-57 | 55.00 | pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Momordic... | [more] |
A0A6J1JIV3 | 4.0e-57 | 55.23 | pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbit... | [more] |
A0A0A0LPF4 | 8.2e-55 | 53.02 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009920 PE=4 SV=1 | [more] |
A0A5A7US52 | 9.1e-54 | 52.59 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT5G61370.1 | 2.6e-45 | 42.48 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G60960.1 | 1.8e-09 | 23.56 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G48810.1 | 3.7e-07 | 27.33 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G04760.1 | 5.4e-06 | 25.66 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G63070.1 | 9.1e-06 | 21.77 | pentatricopeptide (PPR) repeat-containing protein | [more] |