Carg18186 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCAAGCAAAACAAGAAACAAAGCCAATGGGAAGGCCACCCTGCTGCCAAACAATCAGTGTCAAGAAGGGCCCTTGGACTCCCGAGGAAGATATCATCTTGGTTTCTTACATTCATCAACATGGCTCTGGAAATTGGAGATCCGTTCCTCATAACACAGGTAATTATGTCTCCGTTTTTGTTCATTCTTATGTTGAGGATTGTCGTGACAGGTTAATTCCCAATTTTGAGAATGATCATGAATTTATATGTTAGGGCCTTCTGGAGAAGCCCAAAACCGCTTATGCTCAAAGTAGACAATATATTATGAAGTTGTGTCTGATGTTTTATTTAGGGTTGTCGAGATGTAGCAAGAGTTGTAGATTGCGGTGGACGAATTACTTACGGCCCGGGATCAAACGCGGGCAATTCAGTGATCATGAGGAGAAGATGATTATTCATCTCCAAGCCCTGTTAGGCAACAGATGGGCAGCCATAGCCTCGTATCTCCCACGAAGAACGGACAACGATATCAAGAATTATTGGAATACCCATTTGAAAAAGAAGCTAAAAGTGTATGAAAATGGGTTGTCAAAGGGTCAATGGGAAAGAAGGGTTCAAACAGACATTCAAACAGCCAAACAAGCATTGAAAGAAGCTGTATCGCTTACAAAACAAACTCATAATTTTGAATCCAATACCCCTTCTTGTTCTTCATACGCATTAAGTGCTGAAAACATTGCCCGATTGCTCAAAAATTGGACAAAAAATTCAACAAGAAGCAACTCAGAATCAAAAAGCACCCAGAATTGTGTGTCGGTGGAGGAAAGTTCCAAGCTTGAAACTGGGGTTGAAAGCGTGGGGGGAGTGCCACTCACTTTGCTGGAGACATGGCTGTTTGATGATGTTGCGCCTCAAAATCATCAACATCTTATCAACTTCTCATTACAAGACGGTCACCCAGGGTTGTTTTAATCTATTATATCCTCCAAGTTCTTGCTTTCCCTCTACATTTTTAGTTTATATTTACTAAAATTCACCAATTGTAAATCTACCAAAACACGTCTCTTTATAGGCTCATGTTTCGTCCGTTTCAAAGAGGAATGATCTTCGAACATTCTTGTCTCATTCCATTCCAGTGGCTCGACCAATAATCTTGCAGGGTTTCTATTCCAGTGTCTTTCCAGCATAATTATCACCTAAAATTAGTCCACCAATTATAATCTCTAATTAATTATATATTCTAAGAGACAAGCTGTGATGAATTTAGCTCTGTAATAAATGTGACATTTAATTACAATAATTATTTTTGATTTAAACCAATTTATAGAGAAGCCTAGACAATAGCATGTGCCGCCTAACATAGCATAACACCCATGTATTTTATTTATTTATTTTTATTTTATGATTTTGGTCCCCGAATATAGTGGGCCTGAAGTTGGGCTGTAAAATGTTAAGGCCCAATCGACGTCACGACAAAATATAAGTATGGTGAGGTGGCAGGAATATAATATCCAATGGAAGGTAGAAGTGGGCCTGAGATGGGCCCAAAATGGGGGGTGGGGTCAGGGGTGGGAAGGAGGGGACTATGAATGGGCCCAAAGAGAGAGGCCCATTTCAGCAATTTCTGAAATTGTCGGATGCCATAAGGCGTAGCTGTTGGGGAAAGAAGACAGTGTTGTAAGTGCTGGCATTTGGATTGATTGATGGGCCATTGGGCCTTCCTTTTTCGGTTCACGAACGACAAAATGCTGTTTTGTCTACTATTCTTGTCGTGTCAGCCTTGTCGTCGTCATTTTCTTTTTTCCTCGTATTTTATTTTGCTTCGTCTTTTGATTATCCCTTAAATTGGTGTTAAATTTAGAGGAATTATTATGATCTTTATGGGTGTCTTTCAATTATTCCTCGATTAGCGTTAAAGCTAGAGGGATTATTACGATCTTTCTAGAAATGTAACGTTCCAGTCAAATTAGCGTTAAAGCTAGAGGGATTATTACGATCTTTTTAGGAATGTAACGTTCCAATCAAATTAGGAATGTAACGTTCCACTCAAATTGGCGTTAAAGCTAGAGGGATTATTACGATCTTTTCTAGGAATGTGACGTTCCACTCAAACTGGCGTTAAAGTTAGAGGGATTATTACGATCTTTTTGGGGAACGTAAAGTTCCACTCAAATTGCCGTTAAACCTAGAGGGATTATTACGATCTTTCTGGGAATGTAACGTTCCACTCAAATTGGCGTTAAATCCAGAGGGATTACTATGATATTTTTGGAAATGTAACGTTCCCATCAAATTGGCGTTAAATCTAGAGGGATTACTATGATATTTTTGGAAATGTAACGCTCTGCTCAAATTGGCGTTAAATCTAGCGGGATTACTATGATATTTTTGGAAATGTAACGCTCCGCTCAAATTGGTGTTAAATCTAGCGGGATTACTATGATATTTTTGGAAATGTAACGCTCCGCTCAAATTGGTGTTAAATCTAGCGGGATTACTATGATATTTTTGGAAATGTAACGCTCCGCTCAAATTGGGACGAATTGAATTGAATTGAATTGAATTGAATTGAATTGAATTGAATGGAATGGAATGGACAAGTAGTGGTATCTTTGGCAAAGAATAAAAGAATGGAAGGAGAAAGGTTATATAAACAAACAAAATGATTGAAGAGGGGCATGACAAAGATACAATCCCTACAACTCTCCTCTGCAATGAATCAACATTCCCTTAAAACACGGTCCTTAATTCTTGGACGCTATACAAATGAATTGGCAATTCCACAGGTTTTAAAGTGTTACTTCAAAATTGGATTGGGGTTTGATTAAGGCATTTCAAAAGTTTGAATGTAATTGATTTGATGCAAAAGGGACTTGGGGAAGAGGTTGGTTGGTTGAAGGTGCCCACTGTGTTGTTGTTCAATTAAATTATTGGAATCTTAGGCAGTGGAATGGCGTTAATAATGGACCCCTTTGTGCCACACATCTTTGGGCTACACATCTATTCTATACCCTTAATTATGACAGCTTAATTATATAATGTTAGGCCTAAAAAGCCGCTGGTTTAAATCCCCCTTTTGTTTATTGAAAAAAAGAAAGCAATATAATGCGGCCTCTTTTGTGTTCATCCCTTGGTTGTTTCCCTCTCACTGCCACCCCAAGCAGTGTGTGGTGCATTATTTGAAGCAAGAATTGTGTGTAAAGTAAAGCAAACCATATTTGGGTACAATACCGCTTCTACTCCTTAATTAATTACCCCTCCTTTCAGCTACCTTTTTAGGCTTACCAATCAAGGAATGGCACGCCCTTTGAATACCCCTCTGGGTTTGATAACGTGAAATTTGGTAGAGGGTGAGTTGAGTCATTGCGTTGTAATCCCACCAAAAGGGTTTTCAAAATGTTGCCAAAATAAGCTTGTGTTCCTGTTTTGATCGCTTCTGTGTGCCCACTTGGTTTACTTTATAAATACCTCTCTTAGGGTTAGGGCTATATATATATATATATCTTAGGAGCTTCGTCTTGTGTCCCTTTCCTTTAAGTTGCGCCTAATTCACCCAAGATTGGTGGGTTTATGATGAAGAAGAGGGTGGTGGTGTTGAAGAAAACTGAGGGCTCTGGCGCCCGGACCCGCTCCAGAGTGGGCTCTGTCGTGCACTATGTGGAGTGTCGGAAGAACCATGCTGCGAAGCTTGGTGGGTTTGCTGTGGACGGCTGCCGGGAGTTCATGGCCACTGGAGAGGATGGGACTGAGGAGGCTTTCTTCTGTGCTGCTTGTGGCTGCCACAGGAGCTTCCACCGCAGGGAGGTTAATGCTGAAGTTGTTATTGAGTATCATCCTCCAAACCCCAATCATTGA CCAAGCAAAACAAGAAACAAAGCCAATGGGAAGGCCACCCTGCTGCCAAACAATCAGTGTCAAGAAGGGCCCTTGGACTCCCGAGGAAGATATCATCTTGGTTTCTTACATTCATCAACATGGCTCTGGAAATTGGAGATCCGTTCCTCATAACACAGGGTTGTCGAGATGTAGCAAGAGTTGTAGATTGCGGTGGACGAATTACTTACGGCCCGGGATCAAACGCGGGCAATTCAGTGATCATGAGGAGAAGATGATTATTCATCTCCAAGCCCTGTTAGGCAACAGATGGGCAGCCATAGCCTCGTATCTCCCACGAAGAACGGACAACGATATCAAGAATTATTGGAATACCCATTTGAAAAAGAAGCTAAAAGTGTATGAAAATGGGTTGTCAAAGGGTCAATGGGAAAGAAGGGTTCAAACAGACATTCAAACAGCCAAACAAGCATTGAAAGAAGCTGTATCGCTTACAAAACAAACTCATAATTTTGAATCCAATACCCCTTCTTGTTCTTCATACGCATTAAGTGCTGAAAACATTGCCCGATTGCTCAAAAATTGGACAAAAAATTCAACAAGAAGCAACTCAGAATCAAAAAGCACCCAGAATTGTGTGTCGGTGGAGGAAAGTTCCAAGCTTGAAACTGGGGTTGAAAGCGTGGGGGGAGTGCCACTCACTTTGCTGGAGACATGGCTGTTTGATGATGTTGCGCCTCAAAATCATCAACATCTTATCAACTTCTCATTACAAGACGTTGCGCCTAATTCACCCAAGATTGGTGGGTTTATGATGAAGAAGAGGGTGGTGGTGTTGAAGAAAACTGAGGGCTCTGGCGCCCGGACCCGCTCCAGAGTGGGCTCTGTCGTGCACTATGTGGAGTGTCGGAAGAACCATGCTGCGAAGCTTGGTGGGTTTGCTGTGGACGGCTGCCGGGAGTTCATGGCCACTGGAGAGGATGGGACTGAGGAGGCTTTCTTCTGTGCTGCTTGTGGCTGCCACAGGAGCTTCCACCGCAGGGAGGTTAATGCTGAAGTTGTTATTGAGTATCATCCTCCAAACCCCAATCATTGA ATGGGAAGGCCACCCTGCTGCCAAACAATCAGTGTCAAGAAGGGCCCTTGGACTCCCGAGGAAGATATCATCTTGGTTTCTTACATTCATCAACATGGCTCTGGAAATTGGAGATCCGTTCCTCATAACACAGGGTTGTCGAGATGTAGCAAGAGTTGTAGATTGCGGTGGACGAATTACTTACGGCCCGGGATCAAACGCGGGCAATTCAGTGATCATGAGGAGAAGATGATTATTCATCTCCAAGCCCTGTTAGGCAACAGATGGGCAGCCATAGCCTCGTATCTCCCACGAAGAACGGACAACGATATCAAGAATTATTGGAATACCCATTTGAAAAAGAAGCTAAAAGTGTATGAAAATGGGTTGTCAAAGGGTCAATGGGAAAGAAGGGTTCAAACAGACATTCAAACAGCCAAACAAGCATTGAAAGAAGCTGTATCGCTTACAAAACAAACTCATAATTTTGAATCCAATACCCCTTCTTGTTCTTCATACGCATTAAGTGCTGAAAACATTGCCCGATTGCTCAAAAATTGGACAAAAAATTCAACAAGAAGCAACTCAGAATCAAAAAGCACCCAGAATTGTGTGTCGGTGGAGGAAAGTTCCAAGCTTGAAACTGGGGTTGAAAGCGTGGGGGGAGTGCCACTCACTTTGCTGGAGACATGGCTGTTTGATGATGTTGCGCCTCAAAATCATCAACATCTTATCAACTTCTCATTACAAGACGTTGCGCCTAATTCACCCAAGATTGGTGGGTTTATGATGAAGAAGAGGGTGGTGGTGTTGAAGAAAACTGAGGGCTCTGGCGCCCGGACCCGCTCCAGAGTGGGCTCTGTCGTGCACTATGTGGAGTGTCGGAAGAACCATGCTGCGAAGCTTGGTGGGTTTGCTGTGGACGGCTGCCGGGAGTTCATGGCCACTGGAGAGGATGGGACTGAGGAGGCTTTCTTCTGTGCTGCTTGTGGCTGCCACAGGAGCTTCCACCGCAGGGAGGTTAATGCTGAAGTTGTTATTGAGTATCATCCTCCAAACCCCAATCATTGA MGRPPCCQTISVKKGPWTPEEDIILVSYIHQHGSGNWRSVPHNTGLSRCSKSCRLRWTNYLRPGIKRGQFSDHEEKMIIHLQALLGNRWAAIASYLPRRTDNDIKNYWNTHLKKKLKVYENGLSKGQWERRVQTDIQTAKQALKEAVSLTKQTHNFESNTPSCSSYALSAENIARLLKNWTKNSTRSNSESKSTQNCVSVEESSKLETGVESVGGVPLTLLETWLFDDVAPQNHQHLINFSLQDVAPNSPKIGGFMMKKRVVVLKKTEGSGARTRSRVGSVVHYVECRKNHAAKLGGFAVDGCREFMATGEDGTEEAFFCAACGCHRSFHRREVNAEVVIEYHPPNPNH Homology
BLAST of Carg18186 vs. NCBI nr
Match: KAG7021513.1 (Myb-related protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 723.0 bits (1865), Expect = 1.2e-204 Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 0
BLAST of Carg18186 vs. NCBI nr
Match: KAG6587536.1 (Myb-related protein 306, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 498.4 bits (1282), Expect = 4.9e-137 Identity = 242/244 (99.18%), Postives = 242/244 (99.18%), Query Frame = 0
BLAST of Carg18186 vs. NCBI nr
Match: XP_022933554.1 (myb-related protein 306-like [Cucurbita moschata]) HSP 1 Score: 491.1 bits (1263), Expect = 7.8e-135 Identity = 237/244 (97.13%), Postives = 241/244 (98.77%), Query Frame = 0
BLAST of Carg18186 vs. NCBI nr
Match: XP_023529995.1 (myb-related protein 306-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 491.1 bits (1263), Expect = 7.8e-135 Identity = 235/244 (96.31%), Postives = 242/244 (99.18%), Query Frame = 0
BLAST of Carg18186 vs. NCBI nr
Match: XP_022972917.1 (myb-related protein 306-like [Cucurbita maxima]) HSP 1 Score: 475.3 bits (1222), Expect = 4.4e-130 Identity = 229/244 (93.85%), Postives = 236/244 (96.72%), Query Frame = 0
BLAST of Carg18186 vs. ExPASy Swiss-Prot
Match: P81392 (Myb-related protein 306 OS=Antirrhinum majus OX=4151 GN=MYB306 PE=2 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 4.0e-73 Identity = 161/306 (52.61%), Postives = 181/306 (59.15%), Query Frame = 0
BLAST of Carg18186 vs. ExPASy Swiss-Prot
Match: Q9SN78 (Transcription factor MYB94 OS=Arabidopsis thaliana OX=3702 GN=MYB94 PE=1 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 5.4e-70 Identity = 145/242 (59.92%), Postives = 162/242 (66.94%), Query Frame = 0
BLAST of Carg18186 vs. ExPASy Swiss-Prot
Match: Q24JK1 (Transcription factor MYB96 OS=Arabidopsis thaliana OX=3702 GN=MYB96 PE=2 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 2.7e-69 Identity = 150/280 (53.57%), Postives = 174/280 (62.14%), Query Frame = 0
BLAST of Carg18186 vs. ExPASy Swiss-Prot
Match: Q9SCU7 (Transcription factor MYB30 OS=Arabidopsis thaliana OX=3702 GN=MYB30 PE=1 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 7.8e-69 Identity = 141/260 (54.23%), Postives = 166/260 (63.85%), Query Frame = 0
BLAST of Carg18186 vs. ExPASy Swiss-Prot
Match: B3VTV7 (Transcription factor MYB60 OS=Vitis vinifera OX=29760 GN=MYB60 PE=2 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.1e-62 Identity = 130/223 (58.30%), Postives = 153/223 (68.61%), Query Frame = 0
BLAST of Carg18186 vs. ExPASy TrEMBL
Match: A0A6J1F031 (myb-related protein 306-like OS=Cucurbita moschata OX=3662 GN=LOC111440948 PE=4 SV=1) HSP 1 Score: 491.1 bits (1263), Expect = 3.8e-135 Identity = 237/244 (97.13%), Postives = 241/244 (98.77%), Query Frame = 0
BLAST of Carg18186 vs. ExPASy TrEMBL
Match: A0A6J1I642 (myb-related protein 306-like OS=Cucurbita maxima OX=3661 GN=LOC111471426 PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 2.2e-130 Identity = 229/244 (93.85%), Postives = 236/244 (96.72%), Query Frame = 0
BLAST of Carg18186 vs. ExPASy TrEMBL
Match: A0A6J1C4T4 (myb-related protein 306-like OS=Momordica charantia OX=3673 GN=LOC111007390 PE=4 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83 Identity = 177/272 (65.07%), Postives = 198/272 (72.79%), Query Frame = 0
BLAST of Carg18186 vs. ExPASy TrEMBL
Match: A0A5C7H4X5 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_024239 PE=4 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 4.4e-83 Identity = 174/287 (60.63%), Postives = 196/287 (68.29%), Query Frame = 0
BLAST of Carg18186 vs. ExPASy TrEMBL
Match: A0A0A0LUH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009700 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 1.3e-82 Identity = 188/324 (58.02%), Postives = 209/324 (64.51%), Query Frame = 0
BLAST of Carg18186 vs. TAIR 10
Match: AT1G74650.1 (myb domain protein 31 ) HSP 1 Score: 267.3 bits (682), Expect = 1.7e-71 Identity = 158/329 (48.02%), Postives = 198/329 (60.18%), Query Frame = 0
BLAST of Carg18186 vs. TAIR 10
Match: AT3G47600.1 (myb domain protein 94 ) HSP 1 Score: 266.2 bits (679), Expect = 3.8e-71 Identity = 145/242 (59.92%), Postives = 162/242 (66.94%), Query Frame = 0
BLAST of Carg18186 vs. TAIR 10
Match: AT5G62470.2 (myb domain protein 96 ) HSP 1 Score: 263.8 bits (673), Expect = 1.9e-70 Identity = 150/280 (53.57%), Postives = 174/280 (62.14%), Query Frame = 0
BLAST of Carg18186 vs. TAIR 10
Match: AT3G28910.1 (myb domain protein 30 ) HSP 1 Score: 262.3 bits (669), Expect = 5.5e-70 Identity = 141/260 (54.23%), Postives = 166/260 (63.85%), Query Frame = 0
BLAST of Carg18186 vs. TAIR 10
Match: AT5G62470.1 (myb domain protein 96 ) HSP 1 Score: 259.6 bits (662), Expect = 3.6e-69 Identity = 150/280 (53.57%), Postives = 174/280 (62.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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