Carg18155 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18155
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-type domain-containing protein
Location	Carg_Chr11: 672597 .. 674971 (-)
RNA-Seq Expression	Carg18155
Synteny	Carg18155

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAAAAGAGCGAGCGAAGCAGAGTAGTTTACGTTATCCATTATCTCTCTTTCTCCTTCCAAGGTCGTCTTCTCAATTATTCTCGCAAATTAGGGTTTTTCGCGAACTTCTTCCCTTCATTTCGATTTCAACTCTTCAATCATGGTTACTGATTCGATTACCAATGCTTCAGTTTCTTTGGCTCCGAACGCTGGGGATTTGCCCTTGCCCAAGAAGAAGAGGGTGAGGACTCTCTCTCTCTTTATCTTCCGACGTAAATCTTCTAATTTTTTTCTTTTAATTTTAATGCTGATGAGTTTTTTTTTTCTTTTTTTCTTTTTTCTCTTTTGTTGATGTTCGACTGTTGATTTTCTTTTTCTGATATGTCGTAACTGTTTTGGTGGGGGGTTTCAGGTTAGGTATTCCAAATTGAAGCAGTCCAAGCTTGATGTTCGTCGGGAACAATGGCTTTCTCGAGGTATTACTTATAGTTATGTTTTCTTTTGTTGTTAATTGCATATATGTATGGAACGGGATTTATGCTTGTGAGAATTTGTGTTTAATCGATTTGAGTTCACGAGTTATAGGTGCTGTAAAGAACAAAAAATGGAACGAAGACAATCGTCTTGACTCAGTGGTCGTTAAAACGAGGAAAGATGATGATCTTTCCTCTAATAAAATAAATTCGAGGGAAATAGGAGAACAGAACAACAGATCGGTCCACCACCACAGCGATTTTTCAGAGTCGCCGTCTAATAGTCCCCCTAGTCTTGGGAGTAGTATCCTGTGTGGTAATGATTCGGTTCCTCACTTTACTGGGAGTAGCAGTAGTAGTAGTTGCCGAAGCAGCTCTAGTGGTTGTCAGTCGGGGAGTATAACGGAGGAGGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAGCAGCATGATCAATGTTCAGAGTCTTCCCCTAGCGGTAATGTTGTTTCTCAATTGGATTCTTGCGGAGACAGCAGAAATGAGTTGGGCGTAGGAGATGGTGACTCGAGTATTGAACTCGGGAAAATTGCGCAGAGGGCTTCGATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTCTGCCTACGTTATCAAAGCAGCTTAGTTTACCAAATGCAGACAGGCATTTTGGATATGGAGGCATCTCTTGGGCCTGTGGTGGTGTTATGCCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTAGACTTTACAGACTCGAGTTTCTTACCTTGTTTCTGTGGATTTCGGCTTTGCCTTTTCTGTCATAAAAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGTTGCAGGAAGCCATATGATCGTGAACATGTTGACAATGAAACAAATGTAGATGGTGGTAGCCCAACGTTCCTGTTGGCACGTTCTTATAGCATGATTTCAAGGTCTTAGCTAGTGTCCAGTTTCTGTGAGTTTATGTTCATCTGGTCTCACCTTTTTTTTTTTTTTTGTCGTATGTCTCTTGGGTATTATGGTGGTCTGCTCTGCTTTTCATAGCAATAGATGTGGCATTTGGGTGTTGAAGTATGGTTATGAGATTGAGAACCTTTAAACTGATTTGCTTCGTACATGAGTGTGGTTCTTATCTTATGATACATTTGCCAATGTAGAGGACTTATTTCGTACTTGATATGTGAATAGATGAGGTGGTATAGAAATGAATACATGGAATAATGATACAACATTTATTTTTGTCCGCATCTTATTTATTTGTATTTGCATATATTTCATAGAATGCCTGAAACTGTTCTAGTTAGTACTTTCCTCCTTATTCTTGCTGGTTTTATGATACTTAGTGTCGTGATTGACTACTCATATATGGTTTTGTAGCATGTGGCAAGACTCCCAGGCGTATATACACGCTAAAATGAAATGTGGAAATATTTGTAATAACTTCTATGTCACAACTAATTGTTCAATGCTTTTGATGTACATAGCCAGCACCAGCAGTTGAATGTCTGAGATCAGTCAAAGGTAAAAGCTTAACTTGTTTTGCTTTAGAGTTTAGACATGTTGGTTTACTATTGTTTTAATGACTGTTTTAGGATCTGAGGAGTGAACACTGAACGTGGATTGTTATAGAAGAATCTTTGGTTTGATGCACTTTAACATATCTTCATTGGGTTATAGTTCACTTTTTGTTTTTTTTCTTCAGAAACTACTCTTAGTGTTGATGTTTAATGATTGGGACCCTTGATTGTAACTTTTTGGTTCTAACCTGTTCTATTTTGACAGCGTTCTTTTTTATGTATGTTGATTCTTCTTAATAAAAGTGGGTTCCTTTTTTTTTCATTCATTTCAAAATGAA

mRNA sequence

TGGAAAAGAGCGAGCGAAGCAGAGTAGTTTACGTTATCCATTATCTCTCTTTCTCCTTCCAAGGTCGTCTTCTCAATTATTCTCGCAAATTAGGGTTTTTCGCGAACTTCTTCCCTTCATTTCGATTTCAACTCTTCAATCATGGTTACTGATTCGATTACCAATGCTTCAGTTTCTTTGGCTCCGAACGCTGGGGATTTGCCCTTGCCCAAGAAGAAGAGGGTTAGGTATTCCAAATTGAAGCAGTCCAAGCTTGATGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTAAAGAACAAAAAATGGAACGAAGACAATCGTCTTGACTCAGTGGTCGTTAAAACGAGGAAAGATGATGATCTTTCCTCTAATAAAATAAATTCGAGGGAAATAGGAGAACAGAACAACAGATCGGTCCACCACCACAGCGATTTTTCAGAGTCGCCGTCTAATAGTCCCCCTAGTCTTGGGAGTAGTATCCTGTGTGGTAATGATTCGGTTCCTCACTTTACTGGGAGTAGCAGTAGTAGTAGTTGCCGAAGCAGCTCTAGTGGTTGTCAGTCGGGGAGTATAACGGAGGAGGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAGCAGCATGATCAATGTTCAGAGTCTTCCCCTAGCGGTAATGTTGTTTCTCAATTGGATTCTTGCGGAGACAGCAGAAATGAGTTGGGCGTAGGAGATGGTGACTCGAGTATTGAACTCGGGAAAATTGCGCAGAGGGCTTCGATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTCTGCCTACGTTATCAAAGCAGCTTAGTTTACCAAATGCAGACAGGCATTTTGGATATGGAGGCATCTCTTGGGCCTGTGGTGGTGTTATGCCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTAGACTTTACAGACTCGAGTTTCTTACCTTGTTTCTGTGGATTTCGGCTTTGCCTTTTCTGTCATAAAAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGTTGCAGGAAGCCATATGATCGTGAACATGTTGACAATGAAACAAATGTAGATGGTGGTAGCCCAACGTTCCTGTTGGCACGTTCTTATAGCATGATTTCAAGGTCTTAGCTAGTGTCCAGTTTCTGTGAGTTTATGTTCATCTGGTCTCACCTTTTTTTTTTTTTTTGTCGTATGTCTCTTGGGTATTATGGTGGTCTGCTCTGCTTTTCATAGCAATAGATGTGGCATTTGGGTGTTGAAGTATGGTTATGAGATTGAGAACCTTTAAACTGATTTGCTTCGTACATGAGTGTGGTTCTTATCTTATGATACATTTGCCAATGTAGAGGACTTATTTCGTACTTGATATGTGAATAGATGAGGTGGTATAGAAATGAATACATGGAATAATGATACAACATTTATTTTTGTCCGCATCTTATTTATTTGTATTTGCATATATTTCATAGAATGCCTGAAACTGTTCTAGTTAGTACTTTCCTCCTTATTCTTGCTGGTTTTATGATACTTAGTGTCGTGATTGACTACTCATATATGGTTTTGTAGCATGTGGCAAGACTCCCAGGCGTATATACACGCTAAAATGAAATGTGGAAATATTTGTAATAACTTCTATGTCACAACTAATTGTTCAATGCTTTTGATGTACATAGCCAGCACCAGCAGTTGAATGTCTGAGATCAGTCAAAGGTAAAAGCTTAACTTGTTTTGCTTTAGAGTTTAGACATGTTGGTTTACTATTGTTTTAATGACTGTTTTAGGATCTGAGGAGTGAACACTGAACGTGGATTGTTATAGAAGAATCTTTGGTTTGATGCACTTTAACATATCTTCATTGGGTTATAGTTCACTTTTTGTTTTTTTTCTTCAGAAACTACTCTTAGTGTTGATGTTTAATGATTGGGACCCTTGATTGTAACTTTTTGGTTCTAACCTGTTCTATTTTGACAGCGTTCTTTTTTATGTATGTTGATTCTTCTTAATAAAAGTGGGTTCCTTTTTTTTTCATTCATTTCAAAATGAA

Coding sequence (CDS)

ATGGTTACTGATTCGATTACCAATGCTTCAGTTTCTTTGGCTCCGAACGCTGGGGATTTGCCCTTGCCCAAGAAGAAGAGGGTTAGGTATTCCAAATTGAAGCAGTCCAAGCTTGATGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTAAAGAACAAAAAATGGAACGAAGACAATCGTCTTGACTCAGTGGTCGTTAAAACGAGGAAAGATGATGATCTTTCCTCTAATAAAATAAATTCGAGGGAAATAGGAGAACAGAACAACAGATCGGTCCACCACCACAGCGATTTTTCAGAGTCGCCGTCTAATAGTCCCCCTAGTCTTGGGAGTAGTATCCTGTGTGGTAATGATTCGGTTCCTCACTTTACTGGGAGTAGCAGTAGTAGTAGTTGCCGAAGCAGCTCTAGTGGTTGTCAGTCGGGGAGTATAACGGAGGAGGAAGAAGGAGATGATGACTGCTTGGATGATTGGGAGGCTATTGCCGATGCCCTAGCCGCCACTGACAAGCAGCATGATCAATGTTCAGAGTCTTCCCCTAGCGGTAATGTTGTTTCTCAATTGGATTCTTGCGGAGACAGCAGAAATGAGTTGGGCGTAGGAGATGGTGACTCGAGTATTGAACTCGGGAAAATTGCGCAGAGGGCTTCGATGAATTGCCGAGCATGGAGGCCTGATGATGCCTTTCGTCCTCAGAGTCTGCCTACGTTATCAAAGCAGCTTAGTTTACCAAATGCAGACAGGCATTTTGGATATGGAGGCATCTCTTGGGCCTGTGGTGGTGTTATGCCTGTGCCTACATCTTGTCCAATTTGCTTTGAAGACTTAGACTTTACAGACTCGAGTTTCTTACCTTGTTTCTGTGGATTTCGGCTTTGCCTTTTCTGTCATAAAAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGTTGCAGGAAGCCATATGATCGTGAACATGTTGACAATGAAACAAATGTAGATGGTGGTAGCCCAACGTTCCTGTTGGCACGTTCTTATAGCATGATTTCAAGGTCTTAG

Protein sequence

MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDNRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS

Homology

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BLAST of Carg18155 vs. NCBI nr
Match: KAG7021482.1 (MOT-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 695.3 bits (1793), Expect = 2.7e-196
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN
Sbjct: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120
           RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS
Sbjct: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120

Query: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180
           VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS
Sbjct: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180

Query: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240
           PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK
Sbjct: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240

Query: 241 QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300
           QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Sbjct: 241 QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300

Query: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS 346
           ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS
Sbjct: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS 345

[Close]

BLAST of Carg18155 vs. NCBI nr
Match: XP_022933340.1 (uncharacterized protein LOC111440610 [Cucurbita moschata])

HSP 1 Score: 688.7 bits (1776), Expect = 2.5e-194
Identity = 343/345 (99.42%), Postives = 343/345 (99.42%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN
Sbjct: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120
           RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS
Sbjct: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120

Query: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180
           VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS
Sbjct: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180

Query: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240
           PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKI QRASMNCRAWRPDDAFRPQSLPTLSK
Sbjct: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIVQRASMNCRAWRPDDAFRPQSLPTLSK 240

Query: 241 QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300
           QLSLPNADRHFGYGGIS ACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Sbjct: 241 QLSLPNADRHFGYGGISLACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300

Query: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS 346
           ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS
Sbjct: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS 345

[Close]

BLAST of Carg18155 vs. NCBI nr
Match: XP_023529902.1 (uncharacterized protein LOC111792615 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 683.7 bits (1763), Expect = 8.1e-193
Identity = 337/345 (97.68%), Postives = 341/345 (98.84%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN
Sbjct: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120
           RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS
Sbjct: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120

Query: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180
           VPHFTGSSSSSSCRSSSSGCQSGS+TEE+EGDDDCLDDWEAIADALAATDKQHDQCSESS
Sbjct: 121 VPHFTGSSSSSSCRSSSSGCQSGSLTEEDEGDDDCLDDWEAIADALAATDKQHDQCSESS 180

Query: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240
           PSGN+VSQLDSCGDSRNELGVGDGDSSIELGKI QRASMNCRAWRPDDAFRPQSLPTLSK
Sbjct: 181 PSGNIVSQLDSCGDSRNELGVGDGDSSIELGKIVQRASMNCRAWRPDDAFRPQSLPTLSK 240

Query: 241 QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300
           QLSLPN DRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Sbjct: 241 QLSLPNTDRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300

Query: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS 346
           ILEEDGRCPGCRKPYDR+H DNETNVDGGSP FLLARSYSMISRS
Sbjct: 301 ILEEDGRCPGCRKPYDRDHGDNETNVDGGSPMFLLARSYSMISRS 345

[Close]

BLAST of Carg18155 vs. NCBI nr
Match: XP_022972777.1 (uncharacterized protein LOC111471280 [Cucurbita maxima])

HSP 1 Score: 679.5 bits (1752), Expect = 1.5e-191
Identity = 336/345 (97.39%), Postives = 341/345 (98.84%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN
Sbjct: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120
           RLDSVVVKTRKDDDLSSNK+NSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS
Sbjct: 61  RLDSVVVKTRKDDDLSSNKLNSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120

Query: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180
           VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS
Sbjct: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180

Query: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240
           PS NVVSQLDSCGDSRNELG+GDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK
Sbjct: 181 PSANVVSQLDSCGDSRNELGIGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240

Query: 241 QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300
           QLSLPN D+HFGYGGISWACGGVMPVP+SCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Sbjct: 241 QLSLPNTDQHFGYGGISWACGGVMPVPSSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300

Query: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS 346
           ILEEDGRCPGCRK YDR+HVDNETNVD GSPTFLLARSYSMISRS
Sbjct: 301 ILEEDGRCPGCRKSYDRDHVDNETNVDCGSPTFLLARSYSMISRS 345

[Close]

BLAST of Carg18155 vs. NCBI nr
Match: KAG6587498.1 (hypothetical protein SDJN03_16063, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 620.2 bits (1598), Expect = 1.1e-173
Identity = 313/344 (90.99%), Postives = 313/344 (90.99%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN
Sbjct: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120
           RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSP  LG         
Sbjct: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPLVLG--------- 120

Query: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180
                              C SGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS
Sbjct: 121 ----------------VVSCVSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180

Query: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240
           PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK
Sbjct: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240

Query: 241 QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300
           QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Sbjct: 241 QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300

Query: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR 345
           ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR
Sbjct: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR 319

[Close]

BLAST of Carg18155 vs. ExPASy Swiss-Prot
Match: P34909 (General negative regulator of transcription subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MOT2 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.6e-11
Identity = 27/54 (50.00%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 270 CPICFEDLDFTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYDREHV 321
           CP+C E +D TD +F PC CG+++C FC+  I    E +GRCP CR+ YD E+V
Sbjct: 33  CPLCIEPMDITDKNFFPCPCGYQICQFCYNNIRQNPELNGRCPACRRKYDDENV 86

[Close]

BLAST of Carg18155 vs. ExPASy Swiss-Prot
Match: O95628 (CCR4-NOT transcription complex subunit 4 OS=Homo sapiens OX=9606 GN=CNOT4 PE=1 SV=3)

HSP 1 Score: 69.3 bits (168), Expect = 9.5e-11
Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 267 PTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRE 319
           P  CP+C E L+  D +F PC CG+++C FC  RI  +E+G CP CRKPY  +
Sbjct: 11  PVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPED 63

[Close]

BLAST of Carg18155 vs. ExPASy Swiss-Prot
Match: Q8BT14 (CCR4-NOT transcription complex subunit 4 OS=Mus musculus OX=10090 GN=Cnot4 PE=1 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 9.5e-11
Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 267 PTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRE 319
           P  CP+C E L+  D +F PC CG+++C FC  RI  +E+G CP CRKPY  +
Sbjct: 11  PVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPED 63

[Close]

BLAST of Carg18155 vs. ExPASy Swiss-Prot
Match: Q09818 (Putative general negative regulator of transcription C16C9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC16C9.04c PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.6e-10
Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 0


Query: 270 CPICFEDLDFTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPYDREHV 321
           CP+C E++D +D +F PC CG+R+C FC   I E+ +GRCP CR+ Y  E+V
Sbjct: 18  CPLCMEEIDISDKNFKPCQCGYRVCRFCWHHIKEDLNGRCPACRRLYTEENV 69

[Close]

BLAST of Carg18155 vs. ExPASy TrEMBL
Match: A0A6J1F4L8 (uncharacterized protein LOC111440610 OS=Cucurbita moschata OX=3662 GN=LOC111440610 PE=4 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 1.2e-194
Identity = 343/345 (99.42%), Postives = 343/345 (99.42%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN
Sbjct: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120
           RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS
Sbjct: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120

Query: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180
           VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS
Sbjct: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180

Query: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240
           PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKI QRASMNCRAWRPDDAFRPQSLPTLSK
Sbjct: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIVQRASMNCRAWRPDDAFRPQSLPTLSK 240

Query: 241 QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300
           QLSLPNADRHFGYGGIS ACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Sbjct: 241 QLSLPNADRHFGYGGISLACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300

Query: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS 346
           ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS
Sbjct: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS 345

[Close]

BLAST of Carg18155 vs. ExPASy TrEMBL
Match: A0A6J1I5R9 (uncharacterized protein LOC111471280 OS=Cucurbita maxima OX=3661 GN=LOC111471280 PE=4 SV=1)

HSP 1 Score: 679.5 bits (1752), Expect = 7.4e-192
Identity = 336/345 (97.39%), Postives = 341/345 (98.84%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN
Sbjct: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120
           RLDSVVVKTRKDDDLSSNK+NSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS
Sbjct: 61  RLDSVVVKTRKDDDLSSNKLNSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120

Query: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180
           VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS
Sbjct: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESS 180

Query: 181 PSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240
           PS NVVSQLDSCGDSRNELG+GDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK
Sbjct: 181 PSANVVSQLDSCGDSRNELGIGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSK 240

Query: 241 QLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300
           QLSLPN D+HFGYGGISWACGGVMPVP+SCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR
Sbjct: 241 QLSLPNTDQHFGYGGISWACGGVMPVPSSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKR 300

Query: 301 ILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS 346
           ILEEDGRCPGCRK YDR+HVDNETNVD GSPTFLLARSYSMISRS
Sbjct: 301 ILEEDGRCPGCRKSYDRDHVDNETNVDCGSPTFLLARSYSMISRS 345

[Close]

BLAST of Carg18155 vs. ExPASy TrEMBL
Match: A0A1S3BVJ1 (uncharacterized protein LOC103493947 OS=Cucumis melo OX=3656 GN=LOC103493947 PE=4 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 1.4e-169
Identity = 306/349 (87.68%), Postives = 321/349 (91.98%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWN-ED 60
           MVTDSI NAS+SLAPNA DLPLPKKKRVR SKLKQSKLDVRREQWLSRGAVKNKKWN ED
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGND 120
           NRLDSVV+KTRKDD+LSS KIN REIGE+N+RSVHHHSD+S+SPSNSPPSLGSSIL GND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SVPHFTGSSSSSSCRSSSSGCQSGSIT---EEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           S PHFTGSSSSSSCRSSSSGC+SGSIT   EEEEGDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSP GNVVSQLDSCGD RNELGVGDGDS++E G+I QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPN DR FG GG+ WACGGV+PVPTSCPICFEDLD TDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS 346
           CHKRILEEDGRCPGCRKPYDR+  DNETN+  GSPT  LARS SMISRS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMISRS 349

[Close]

BLAST of Carg18155 vs. ExPASy TrEMBL
Match: A0A5A7UPV5 (Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002030 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 4.0e-169
Identity = 305/348 (87.64%), Postives = 320/348 (91.95%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWN-ED 60
           MVTDSI NAS+SLAPNA DLPLPKKKRVR SKLKQSKLDVRREQWLSRGAVKNKKWN ED
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGND 120
           NRLDSVV+KTRKDD+LSS KIN REIGE+N+RSVHHHSD+S+SPSNSPPSLGSSIL GND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SVPHFTGSSSSSSCRSSSSGCQSGSIT---EEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           S PHFTGSSSSSSCRSSSSGC+SGSIT   EEEEGDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSP GNVVSQLDSCGD RNELGVGDGDS++E G+I QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPN DR FG GG+ WACGGV+PVPTSCPICFEDLD TDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR 345
           CHKRILEEDGRCPGCRKPYDR+  DNETN+  GSPT  LARS SMISR
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMISR 348

[Close]

BLAST of Carg18155 vs. ExPASy TrEMBL
Match: A0A5D3BIS7 (Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002110 PE=4 SV=1)

HSP 1 Score: 602.1 bits (1551), Expect = 1.5e-168
Identity = 304/347 (87.61%), Postives = 319/347 (91.93%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWN-ED 60
           MVTDSI NAS+SLAPNA DLPLPKKKRVR SKLKQSKLDVRREQWLSRGAVKNKKWN ED
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGND 120
           NRLDSVV+KTRKDD+LSS KIN REIGE+N+RSVHHHSD+S+SPSNSPPSLGSSIL GND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SVPHFTGSSSSSSCRSSSSGCQSGSIT---EEEEGDDDCLDDWEAIADALAATDKQHDQC 180
           S PHFTGSSSSSSCRSSSSGC+SGSIT   EEEEGDDDCLDDWEAIADALAATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLP 240
           SESSP GNVVSQLDSCGD RNELGVGDGDS++E G+I QRASMNCRAWRPDDAFRPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLF 300
           TLSKQLSLPN DR FG GG+ WACGGV+PVPTSCPICFEDLD TDSSFLPCFCGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMIS 344
           CHKRILEEDGRCPGCRKPYDR+  DNETN+  GSPT  LARS SMIS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMIS 347

[Close]

BLAST of Carg18155 vs. TAIR 10
Match: AT3G48070.1 (RING/U-box superfamily protein )

HSP 1 Score: 258.8 bits (660), Expect = 6.0e-69
Identity = 166/351 (47.29%), Postives = 210/351 (59.83%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           M++DSITNAS + AP A D    KK+  R +KLKQSKL +RREQWLS+ A+ NK   E+ 
Sbjct: 1   MISDSITNASATSAPTARDFG-KKKRTNRSAKLKQSKLGLRREQWLSQVAMINKGDKEEM 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120
             +  +   + D       + +    +++N   H H  F ES SNSP    +SIL G +S
Sbjct: 61  ESNRRIGSEKPDQRDLPRPVENL---DEDNNGTHRHESFIESLSNSP----NSILSGMNS 120

Query: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDD-CLDDWEAIADALAATDKQHDQCSES 180
           +P+F+ SSS     S S G  SG+ITEEE+ DDD CLDDWEAIADALAA D++H++  E+
Sbjct: 121 IPNFSSSSS-----SGSGGSCSGNITEEEDADDDGCLDDWEAIADALAADDEKHEK--EN 180

Query: 181 SPSGNVVSQLDSC---GDSRNELGVGDGDSSIELGKI--AQRASMNCRAWRPDDAFRPQS 240
            P        +SC    D +    +G  D  +   K    +R   + +AWRPDD  RPQ 
Sbjct: 181 PP--------ESCQEHEDIKQSALIGGADVVLRDAKADSQRRKQKSNQAWRPDDKLRPQG 240

Query: 241 LPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLC 300
           LP L KQ S P  + HF           V  VP+SCPIC+EDLD TDS+FLPC CGFRLC
Sbjct: 241 LPNLEKQRSFPVMNLHF---------SSVTVVPSSCPICYEDLDLTDSNFLPCPCGFRLC 300

Query: 301 LFCHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISRS 346
           LFCHK I + DGRCPGCRKPY+R  +  E +V GG  T  LARS SM  RS
Sbjct: 301 LFCHKTICDGDGRCPGCRKPYERNTIKFEASVQGGGLTIRLARSSSMFCRS 319

[Close]

BLAST of Carg18155 vs. TAIR 10
Match: AT3G48070.2 (RING/U-box superfamily protein )

HSP 1 Score: 257.7 bits (657), Expect = 1.3e-68
Identity = 165/350 (47.14%), Postives = 209/350 (59.71%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           M++DSITNAS + AP A D    KK+  R +KLKQSKL +RREQWLS+ A+ NK   E+ 
Sbjct: 1   MISDSITNASATSAPTARDFG-KKKRTNRSAKLKQSKLGLRREQWLSQVAMINKGDKEEM 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120
             +  +   + D       + +    +++N   H H  F ES SNSP    +SIL G +S
Sbjct: 61  ESNRRIGSEKPDQRDLPRPVENL---DEDNNGTHRHESFIESLSNSP----NSILSGMNS 120

Query: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDD-CLDDWEAIADALAATDKQHDQCSES 180
           +P+F+ SSS     S S G  SG+ITEEE+ DDD CLDDWEAIADALAA D++H++  E+
Sbjct: 121 IPNFSSSSS-----SGSGGSCSGNITEEEDADDDGCLDDWEAIADALAADDEKHEK--EN 180

Query: 181 SPSGNVVSQLDSC---GDSRNELGVGDGDSSIELGKI--AQRASMNCRAWRPDDAFRPQS 240
            P        +SC    D +    +G  D  +   K    +R   + +AWRPDD  RPQ 
Sbjct: 181 PP--------ESCQEHEDIKQSALIGGADVVLRDAKADSQRRKQKSNQAWRPDDKLRPQG 240

Query: 241 LPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPCFCGFRLC 300
           LP L KQ S P  + HF           V  VP+SCPIC+EDLD TDS+FLPC CGFRLC
Sbjct: 241 LPNLEKQRSFPVMNLHF---------SSVTVVPSSCPICYEDLDLTDSNFLPCPCGFRLC 300

Query: 301 LFCHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR 345
           LFCHK I + DGRCPGCRKPY+R  +  E +V GG  T  LARS SM  R
Sbjct: 301 LFCHKTICDGDGRCPGCRKPYERNTIKFEASVQGGGLTIRLARSSSMFCR 318

[Close]

BLAST of Carg18155 vs. TAIR 10
Match: AT5G62910.1 (RING/U-box superfamily protein )

HSP 1 Score: 251.5 bits (641), Expect = 9.6e-67
Identity = 166/357 (46.50%), Postives = 214/357 (59.94%), Query Frame = 0


Query: 1   MVTDSITNASVSLAPNAGDLPLPKKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNEDN 60
           M+TDSITNAS + AP        KK+  + +K+KQ+KL +RREQWLS+ AV NK+  E+ 
Sbjct: 1   MITDSITNASATSAPRDSG---KKKRNNKSAKMKQNKLGLRREQWLSQVAVSNKEVKEER 60

Query: 61  RLDSVVVKTRKDDDLSSNKINSREIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDS 120
            ++    +++K    SS+K+   E     N  +HH S F ESPSNS  S+G     G  S
Sbjct: 61  SVN----RSQKPHHESSDKVRREEDNNGGNNLLHHES-FMESPSNS--SVG-----GTYS 120

Query: 121 VPHFTGSSSSSSCRSSSSGCQSGSITEEEEGDDD---CLDDWEAIADALAATDK------ 180
             +F+G SS SS  SSSSG  SG+ITEEE  DDD   C+DDWEA+ADALAA ++      
Sbjct: 121 STNFSGRSSRSS--SSSSGFCSGNITEEENVDDDDDGCVDDWEAVADALAAEEEIEKKSR 180

Query: 181 ----QHDQCSESSPSGNVVSQLDSCGDSRNELGVGDGDSSIELGKIAQRASMNCRAWRPD 240
                 +Q S    + NV     S  D+ + +GV D     E  +++ R   + RAWR D
Sbjct: 181 PLESVKEQVSVGQSASNVCD--SSISDASDVVGVEDPKQ--ECLRVSSRKQTSNRAWRLD 240

Query: 241 DAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGGVMPVPTSCPICFEDLDFTDSSFLPC 300
           D  RPQ LP L+KQLS P  D+ F            + +P+SCPIC+EDLD TDS+FLPC
Sbjct: 241 DDLRPQGLPNLAKQLSFPELDKRF----------SSVAIPSSCPICYEDLDLTDSNFLPC 300

Query: 301 FCGFRLCLFCHKRILEEDGRCPGCRKPYDREHVDNETNVDGGSPTFLLARSYSMISR 345
            CGFRLCLFCHK I + DGRCPGCRKPY+R  V  ET++ GG  T  LARS SM  +
Sbjct: 301 PCGFRLCLFCHKTICDGDGRCPGCRKPYERNMVKAETSIQGGGLTIRLARSSSMFCK 326

[Close]

BLAST of Carg18155 vs. TAIR 10
Match: AT1G74870.1 (RING/U-box superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 7.0e-17
Identity = 87/295 (29.49%), Postives = 129/295 (43.73%), Query Frame = 0


Query: 24  KKKRVRYSKLKQSKLDVRREQWLSRGAVKNKKWNE-DNRLDSVVVKTRKDDDLSSNKINS 83
           K+K   + KLKQ K+D RR+QW+S+    N    E   RL S++ K     D  + +I+ 
Sbjct: 22  KRKANWFCKLKQWKIDARRKQWISQWKKANVDEEEIGRRLRSLLEKL---TDQKAWRIDY 81

Query: 84  REIGEQNNRSVHHHSDFSESPSNSPPSLGSSILCGNDSVPHFTGSSSSSSCRSSSSGCQS 143
            +  E +   +   S F+ SP        +S+L   DSV      S    C      C  
Sbjct: 82  DD-DEDDEIDLERTSSFASSP--------TSVLKRKDSV------SGDCFC------CSK 141

Query: 144 GSITEEEEGDDDCLDDWEAIADALAATDKQHDQCSESSPSGNVVSQLDSCGDSRNELGVG 203
               EEEE  DD  D+W+   DAL + +      ++++ S  +V++     D   E    
Sbjct: 142 QMTEEEEEVFDDAYDNWDGFKDALNSFE------NDNNESSRLVTE-----DFEQEEEDL 201

Query: 204 DGDSSIELGKIAQRASMNCRAWRPDDAFRPQSLPTLSKQLSLPNADRHFGYGGISWACGG 263
             D+S  + K  Q A+               ++   S +    N+++  G G        
Sbjct: 202 IPDTSQRMNKCKQEAAPG----------NQTTIHRNSNKKKRSNSEKQRGDG-------- 259

Query: 264 VMPVPTSCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYDR 318
                  CPIC E +D TD  F PC CGFR+CLFCH +I E + RCP CRK Y +
Sbjct: 262 ----DEECPICSELMDATDLEFEPCTCGFRICLFCHNKISENEARCPACRKDYKK 259

[Close]

BLAST of Carg18155 vs. TAIR 10
Match: AT3G45630.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-11
Identity = 24/58 (41.38%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 269 SCPICFEDLDFTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYDREHV 321
           +CP+C E++D TD    PC CG+++C++C   I+      + +GRCP CR PYD+E +
Sbjct: 8   TCPLCAEEMDLTDQQLKPCKCGYQICVWCWHHIMDMAEKDQSEGRCPACRTPYDKEKI 65

The following BLAST results are available for this feature:

BLAST of Carg18155 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021482.1	2.7e-196	100.00	MOT-2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022933340.1	2.5e-194	99.42	uncharacterized protein LOC111440610 [Cucurbita moschata]	[more]
XP_023529902.1	8.1e-193	97.68	uncharacterized protein LOC111792615 [Cucurbita pepo subsp. pepo]	[more]
XP_022972777.1	1.5e-191	97.39	uncharacterized protein LOC111471280 [Cucurbita maxima]	[more]
KAG6587498.1	1.1e-173	90.99	hypothetical protein SDJN03_16063, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Carg18155 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P34909	5.6e-11	50.00	General negative regulator of transcription subunit 4 OS=Saccharomyces cerevisia...	[more]
O95628	9.5e-11	49.06	CCR4-NOT transcription complex subunit 4 OS=Homo sapiens OX=9606 GN=CNOT4 PE=1 S...	[more]
Q8BT14	9.5e-11	49.06	CCR4-NOT transcription complex subunit 4 OS=Mus musculus OX=10090 GN=Cnot4 PE=1 ...	[more]
Q09818	1.6e-10	50.00	Putative general negative regulator of transcription C16C9.04c OS=Schizosaccharo...	[more]

BLAST of Carg18155 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4L8	1.2e-194	99.42	uncharacterized protein LOC111440610 OS=Cucurbita moschata OX=3662 GN=LOC1114406...	[more]
A0A6J1I5R9	7.4e-192	97.39	uncharacterized protein LOC111471280 OS=Cucurbita maxima OX=3661 GN=LOC111471280...	[more]
A0A1S3BVJ1	1.4e-169	87.68	uncharacterized protein LOC103493947 OS=Cucumis melo OX=3656 GN=LOC103493947 PE=...	[more]
A0A5A7UPV5	4.0e-169	87.64	Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3BIS7	1.5e-168	87.61	Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Carg18155 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48070.1	6.0e-69	47.29	RING/U-box superfamily protein	[more]
AT3G48070.2	1.3e-68	47.14	RING/U-box superfamily protein	[more]
AT5G62910.1	9.6e-67	46.50	RING/U-box superfamily protein	[more]
AT1G74870.1	7.0e-17	29.49	RING/U-box superfamily protein	[more]
AT3G45630.1	1.5e-11	41.38	RNA binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 266..327 e-value: 1.3E-17 score: 64.8
None	No IPR available	PFAM	PF14570	zf-RING_4	coord: 270..316 e-value: 7.2E-18 score: 64.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..114
None	No IPR available	PANTHER	PTHR12603:SF7	RING/U-BOX SUPERFAMILY PROTEIN	coord: 7..343
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 268..320
IPR039780	CCR4-NOT transcription complex subunit 4	PANTHER	PTHR12603	CCR4-NOT TRANSCRIPTION COMPLEX RELATED	coord: 7..343
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 270..312 score: 9.096088
IPR039515	NOT4, modified RING finger, HC subclass (C4C4-type)	CDD	cd16618	mRING-HC-C4C4_CNOT4	coord: 270..313 e-value: 5.32338E-18 score: 74.5732

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18155-RA	Carg18155-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0004842	ubiquitin-protein transferase activity