Carg18124 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18124
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein DETOXIFICATION
Location	Carg_Chr11: 11533512 .. 11534867 (+)
RNA-Seq Expression	Carg18124
Synteny	Carg18124

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGTAGCGATGTCAATGGTCACTCGTCAAGGTGCAGTACCTATGGCTGCACATCAAATATGTATGCAAGTATGGTTAGCAGTAACTACTCTTACTGAAGCTCTTGCTACTTCTAGTCAGGTAAACATTTTTTTGAAATAATGAAGTCCGAAATTGAGGATGTTCTCACCATGGCTTTATCTGTTTTTCTCCTTGACATTGAAATTGCGTACACTGATAGGTTATAGTTGCGAGTGCTGCATCAAAAAGAGATTATAAGACTGCAAAGAAAGTTACAAGCTTAGCCATAAAGGTACAATTTCATTTTATTTGTGCATTTGTGTCACTACATTCCCACTGGAAGTCTTTTGAAACTTGACGTTTCAACAAATGAACAAGTTTTATATGGATTTGGTTCAGGTAGGCTTGCTCGCAGGTATCATATTATGTGCAGTCCTTGGAGCATCTTTTCATTCTTTGGCCCCTTTGTTCACCAAGGATCCTCAAGTGTTGGAAATTCTTAGAAAGGGAGTGCTGGTAAGTTATGCAGTTTCGTTTTGAACAGAACTCGTCCTTGCTAGGTTGAACCTTTTCATATATGTGGCTCACAGAATGCTTCCATTGAATCTTGTACAGTTTGTAAGTGGCGCTCAACCTTTGATTCCTCTAGCAACTCTCTTTGATGGTTTGCATTATGGTGTTTCGGACTTCCCGTATGCAGCTTGGTCAACGGTAAACATTTTCCTTCATAGTAGAGATCACTAAAATGAAGTATCCTTTTCTCCAAAGTGAAGACAAACTTGTTGGTTATATTAGGTGGTGGTTGGAACAGTCTCTTCATGCGTTATGCTTTATGCTCCTTCCAGTTTTGGTCTCTATAGGACATGGCTAGGCTTGACACTCTTTATGGGCTTGCGTACTGTAGCTGGTTTTGCCAGGTACAATCTCGCTCTTGAACTCAAGGAAACAACTGTATAGCCTATAGAAATAGATCCTGTACTTGTTTTCATTCTTGAAGGACCTGACAACCAAAAGTTCATCACATAGAATGAGCAAATCTTATGATGATAGGTCATCAATATGCAAGATTGAAGTTCGAAATGTGAAGCTACCAATAGTTTTTAGCTCATAACTAAGTAGTTAGATGGGAAAAGTATGCAGAAGTGCTTGCATTCTAATTCTATCCTTGGATGCATTTTATCATGATACTGAAAGGGATAGTCAATTTTAAGCTCTGGAATTCAGATAGATGATAGACCATTGATCCCTAGTTCTAATGTGATTCTTCTCTACAAACATTTATAACTTCCATGCGGTTGTTTTGTTATGCAGATTGCTTTCAAAAAATGGTCCATGGTGGTTCCTGCACAGTAA

mRNA sequence

ATGACGGTAGCGATGTCAATGGTCACTCGTCAAGGTGCAGTACCTATGGCTGCACATCAAATATGTATGCAAGTATGGTTAGCAGTAACTACTCTTACTGAAGCTCTTGCTACTTCTAGTCAGGTTATAGTTGCGAGTGCTGCATCAAAAAGAGATTATAAGACTGCAAAGAAAGTTACAAGCTTAGCCATAAAGGTAGGCTTGCTCGCAGGTATCATATTATGTGCAGTCCTTGGAGCATCTTTTCATTCTTTGGCCCCTTTGTTCACCAAGGATCCTCAAGTGTTGGAAATTCTTAGAAAGGGAGTGCTGTTTGTAAGTGGCGCTCAACCTTTGATTCCTCTAGCAACTCTCTTTGATGGTTTGCATTATGGTGTTTCGGACTTCCCGTATGCAGCTTGGTCAACGATTGCTTTCAAAAAATGGTCCATGGTGGTTCCTGCACAGTAA

Coding sequence (CDS)

ATGACGGTAGCGATGTCAATGGTCACTCGTCAAGGTGCAGTACCTATGGCTGCACATCAAATATGTATGCAAGTATGGTTAGCAGTAACTACTCTTACTGAAGCTCTTGCTACTTCTAGTCAGGTTATAGTTGCGAGTGCTGCATCAAAAAGAGATTATAAGACTGCAAAGAAAGTTACAAGCTTAGCCATAAAGGTAGGCTTGCTCGCAGGTATCATATTATGTGCAGTCCTTGGAGCATCTTTTCATTCTTTGGCCCCTTTGTTCACCAAGGATCCTCAAGTGTTGGAAATTCTTAGAAAGGGAGTGCTGTTTGTAAGTGGCGCTCAACCTTTGATTCCTCTAGCAACTCTCTTTGATGGTTTGCATTATGGTGTTTCGGACTTCCCGTATGCAGCTTGGTCAACGATTGCTTTCAAAAAATGGTCCATGGTGGTTCCTGCACAGTAA

Protein sequence

MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVTSLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFDGLHYGVSDFPYAAWSTIAFKKWSMVVPAQ

Homology

[Close]

BLAST of Carg18124 vs. NCBI nr
Match: KAG7022761.1 (Protein DETOXIFICATION 45, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 282.3 bits (721), Expect = 2.4e-72
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT
Sbjct: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD
Sbjct: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120

Query: 121 GLHYGVSDFPYAAWSTIAFKKWSMVVPAQ 150
           GLHYGVSDFPYAAWSTIAFKKWSMVVPAQ
Sbjct: 121 GLHYGVSDFPYAAWSTIAFKKWSMVVPAQ 149

[Close]

BLAST of Carg18124 vs. NCBI nr
Match: KAG6589046.1 (Protein DETOXIFICATION 45, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 269.2 bits (687), Expect = 2.1e-68
Identity = 148/168 (88.10%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT
Sbjct: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD
Sbjct: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120

Query: 121 GLHYGVSDFPYAAWST-------------------IAFKKWSMVVPAQ 150
           GLHYGVSDFPYAAWST                   I FKKWSMVVPAQ
Sbjct: 121 GLHYGVSDFPYAAWSTDMARLDTLYGLAYCSWFCQITFKKWSMVVPAQ 168

[Close]

BLAST of Carg18124 vs. NCBI nr
Match: XP_023529659.1 (protein DETOXIFICATION 45, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT
Sbjct: 353 MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 412

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD
Sbjct: 413 SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 472

Query: 121 GLHYGVSDFPYAAWSTI 138
           GLHYGVSDFPYAAWST+
Sbjct: 473 GLHYGVSDFPYAAWSTV 489

[Close]

BLAST of Carg18124 vs. NCBI nr
Match: XP_022928234.1 (protein DETOXIFICATION 45, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT
Sbjct: 366 MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 425

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD
Sbjct: 426 SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 485

Query: 121 GLHYGVSDFPYAAWSTI 138
           GLHYGVSDFPYAAWST+
Sbjct: 486 GLHYGVSDFPYAAWSTV 502

[Close]

BLAST of Carg18124 vs. NCBI nr
Match: XP_023529658.1 (protein DETOXIFICATION 45, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT
Sbjct: 366 MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 425

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD
Sbjct: 426 SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 485

Query: 121 GLHYGVSDFPYAAWSTI 138
           GLHYGVSDFPYAAWST+
Sbjct: 486 GLHYGVSDFPYAAWSTV 502

[Close]

BLAST of Carg18124 vs. ExPASy Swiss-Prot
Match: Q9SVE7 (Protein DETOXIFICATION 45, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DTX45 PE=2 SV=2)

HSP 1 Score: 168.3 bits (425), Expect = 6.5e-41
Identity = 86/135 (63.70%), Postives = 108/135 (80.00%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVA SM  RQG   MAAHQICMQVWLAV+ LT+ALA+S Q ++AS+ASKRD++  K+VT
Sbjct: 365 MTVATSMAARQGVFAMAAHQICMQVWLAVSLLTDALASSGQALIASSASKRDFEGVKEVT 424

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           +  +K+G++ GI L  VLG SF S+A LF+KDP+VL I+RKGVLFV+  QP+  LA +FD
Sbjct: 425 TFVLKIGVVTGIALAIVLGMSFSSIAGLFSKDPEVLRIVRKGVLFVAATQPITALAFIFD 484

Query: 121 GLHYGVSDFPYAAWS 136
           GLHYG+SDFPYAA S
Sbjct: 485 GLHYGMSDFPYAACS 499

[Close]

BLAST of Carg18124 vs. ExPASy Swiss-Prot
Match: Q9SYD6 (Protein DETOXIFICATION 42 OS=Arabidopsis thaliana OX=3702 GN=DTX42 PE=2 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 2.7e-26
Identity = 61/137 (44.53%), Postives = 93/137 (67.88%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           +T++ S+  R+G+  MAA Q+C+QVWLA + L +  A + Q I+ASA +K+DYK A    
Sbjct: 326 VTLSASLAAREGSTSMAAFQVCLQVWLATSLLADGYAVAGQAILASAFAKKDYKRAAATA 385

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           S  +++GL+ G +L  +LGA  H  A +FTKD +VL ++  G+ FV+G QP+  LA +FD
Sbjct: 386 SRVLQLGLVLGFVLAVILGAGLHFGARVFTKDDKVLHLISIGLPFVAGTQPINALAFVFD 445

Query: 121 GLHYGVSDFPYAAWSTI 138
           G+++G SDF YAA S +
Sbjct: 446 GVNFGASDFGYAAASLV 462

[Close]

BLAST of Carg18124 vs. ExPASy Swiss-Prot
Match: Q84K71 (Protein DETOXIFICATION 44, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DTX44 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.5e-24
Identity = 62/136 (45.59%), Postives = 93/136 (68.38%), Query Frame = 0


Query: 2   TVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVTS 61
           T+A S+  + G   MA HQI +++WLAV+ LT+ALA ++Q ++A+  S+ +YK A++V  
Sbjct: 327 TLATSLAAQNGPTQMAGHQIVLEIWLAVSLLTDALAIAAQSLLATTYSQGEYKQAREVLF 386

Query: 62  LAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFDG 121
             ++VGL  G  L AVL  +F   + LFT D +VL+I   G LFV+G+QP+  LA + DG
Sbjct: 387 GVLQVGLATGTGLAAVLFITFEPFSSLFTTDSEVLKIALSGTLFVAGSQPVNALAFVLDG 446

Query: 122 LHYGVSDFPYAAWSTI 138
           L+YGVSDF +AA+S +
Sbjct: 447 LYYGVSDFGFAAYSMV 462

[Close]

BLAST of Carg18124 vs. ExPASy Swiss-Prot
Match: Q9SFB0 (Protein DETOXIFICATION 43 OS=Arabidopsis thaliana OX=3702 GN=DTX43 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 9.8e-21
Identity = 51/136 (37.50%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 2   TVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVTS 61
           T+A +M  R G  PMAA QIC+QVWL  + L + LA + Q I+A + +++DY     V S
Sbjct: 331 TLAAAMAARLGTTPMAAFQICLQVWLTSSLLNDGLAVAGQAILACSFAEKDYNKVTAVAS 390

Query: 62  LAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFDG 121
             +++G + G+ L   +G   +  A +F+KDP V+ ++  G+ F++  QP+  LA + DG
Sbjct: 391 RVLQMGFVLGLGLSVFVGLGLYFGAGVFSKDPAVIHLMAIGIPFIAATQPINSLAFVLDG 450

Query: 122 LHYGVSDFPYAAWSTI 138
           +++G SDF Y A+S +
Sbjct: 451 VNFGASDFAYTAYSMV 466

[Close]

BLAST of Carg18124 vs. ExPASy TrEMBL
Match: A0A6J1EKA0 (Protein DETOXIFICATION OS=Cucurbita moschata OX=3662 GN=LOC111435128 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.1e-65
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT
Sbjct: 366 MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 425

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD
Sbjct: 426 SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 485

Query: 121 GLHYGVSDFPYAAWSTI 138
           GLHYGVSDFPYAAWST+
Sbjct: 486 GLHYGVSDFPYAAWSTV 502

[Close]

BLAST of Carg18124 vs. ExPASy TrEMBL
Match: A0A6J1JKC4 (Protein DETOXIFICATION OS=Cucurbita maxima OX=3661 GN=LOC111486599 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 9.7e-64
Identity = 134/137 (97.81%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKV 
Sbjct: 366 MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVA 425

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLA LFD
Sbjct: 426 SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLAILFD 485

Query: 121 GLHYGVSDFPYAAWSTI 138
           GLHYGVSDFPYAAWST+
Sbjct: 486 GLHYGVSDFPYAAWSTV 502

[Close]

BLAST of Carg18124 vs. ExPASy TrEMBL
Match: A0A6J1C6G1 (Protein DETOXIFICATION OS=Momordica charantia OX=3673 GN=LOC111007817 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 6.1e-42
Identity = 98/138 (71.01%), Postives = 112/138 (81.16%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MT+  SM  RQGAV MAAHQICMQVWLAV+ LT+ALA SSQ ++AS+ SK DYKTAK+VT
Sbjct: 405 MTLGTSMAARQGAVAMAAHQICMQVWLAVSLLTDALAASSQAMIASSVSKGDYKTAKEVT 464

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
            LA+K+GLL GIIL A+LG+SF SLA LFTKD  VL I+R GVLFVS  QPL  LA +FD
Sbjct: 465 GLALKIGLLTGIILFAILGSSFGSLATLFTKDADVLGIVRTGVLFVSATQPLNSLAFVFD 524

Query: 121 GLHYGVSDFPYAAWSTIA 139
           GLHYGVSDFPYAA S +A
Sbjct: 525 GLHYGVSDFPYAACSMMA 542

[Close]

BLAST of Carg18124 vs. ExPASy TrEMBL
Match: A0A6J1C2B9 (Protein DETOXIFICATION OS=Momordica charantia OX=3673 GN=LOC111007817 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 6.1e-42
Identity = 98/138 (71.01%), Postives = 112/138 (81.16%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MT+  SM  RQGAV MAAHQICMQVWLAV+ LT+ALA SSQ ++AS+ SK DYKTAK+VT
Sbjct: 405 MTLGTSMAARQGAVAMAAHQICMQVWLAVSLLTDALAASSQAMIASSVSKGDYKTAKEVT 464

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
            LA+K+GLL GIIL A+LG+SF SLA LFTKD  VL I+R GVLFVS  QPL  LA +FD
Sbjct: 465 GLALKIGLLTGIILFAILGSSFGSLATLFTKDADVLGIVRTGVLFVSATQPLNSLAFVFD 524

Query: 121 GLHYGVSDFPYAAWSTIA 139
           GLHYGVSDFPYAA S +A
Sbjct: 525 GLHYGVSDFPYAACSMMA 542

[Close]

BLAST of Carg18124 vs. ExPASy TrEMBL
Match: A0A6J1C2N8 (Protein DETOXIFICATION OS=Momordica charantia OX=3673 GN=LOC111007817 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 6.1e-42
Identity = 98/138 (71.01%), Postives = 112/138 (81.16%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MT+  SM  RQGAV MAAHQICMQVWLAV+ LT+ALA SSQ ++AS+ SK DYKTAK+VT
Sbjct: 402 MTLGTSMAARQGAVAMAAHQICMQVWLAVSLLTDALAASSQAMIASSVSKGDYKTAKEVT 461

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
            LA+K+GLL GIIL A+LG+SF SLA LFTKD  VL I+R GVLFVS  QPL  LA +FD
Sbjct: 462 GLALKIGLLTGIILFAILGSSFGSLATLFTKDADVLGIVRTGVLFVSATQPLNSLAFVFD 521

Query: 121 GLHYGVSDFPYAAWSTIA 139
           GLHYGVSDFPYAA S +A
Sbjct: 522 GLHYGVSDFPYAACSMMA 539

[Close]

BLAST of Carg18124 vs. TAIR 10
Match: AT4G38380.1 (MATE efflux family protein )

HSP 1 Score: 168.3 bits (425), Expect = 4.6e-42
Identity = 86/135 (63.70%), Postives = 108/135 (80.00%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           MTVA SM  RQG   MAAHQICMQVWLAV+ LT+ALA+S Q ++AS+ASKRD++  K+VT
Sbjct: 365 MTVATSMAARQGVFAMAAHQICMQVWLAVSLLTDALASSGQALIASSASKRDFEGVKEVT 424

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           +  +K+G++ GI L  VLG SF S+A LF+KDP+VL I+RKGVLFV+  QP+  LA +FD
Sbjct: 425 TFVLKIGVVTGIALAIVLGMSFSSIAGLFSKDPEVLRIVRKGVLFVAATQPITALAFIFD 484

Query: 121 GLHYGVSDFPYAAWS 136
           GLHYG+SDFPYAA S
Sbjct: 485 GLHYGMSDFPYAACS 499

[Close]

BLAST of Carg18124 vs. TAIR 10
Match: AT1G51340.2 (MATE efflux family protein )

HSP 1 Score: 119.8 bits (299), Expect = 1.9e-27
Identity = 61/137 (44.53%), Postives = 93/137 (67.88%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           +T++ S+  R+G+  MAA Q+C+QVWLA + L +  A + Q I+ASA +K+DYK A    
Sbjct: 326 VTLSASLAAREGSTSMAAFQVCLQVWLATSLLADGYAVAGQAILASAFAKKDYKRAAATA 385

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           S  +++GL+ G +L  +LGA  H  A +FTKD +VL ++  G+ FV+G QP+  LA +FD
Sbjct: 386 SRVLQLGLVLGFVLAVILGAGLHFGARVFTKDDKVLHLISIGLPFVAGTQPINALAFVFD 445

Query: 121 GLHYGVSDFPYAAWSTI 138
           G+++G SDF YAA S +
Sbjct: 446 GVNFGASDFGYAAASLV 462

[Close]

BLAST of Carg18124 vs. TAIR 10
Match: AT1G51340.1 (MATE efflux family protein )

HSP 1 Score: 119.8 bits (299), Expect = 1.9e-27
Identity = 61/137 (44.53%), Postives = 93/137 (67.88%), Query Frame = 0


Query: 1   MTVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVT 60
           +T++ S+  R+G+  MAA Q+C+QVWLA + L +  A + Q I+ASA +K+DYK A    
Sbjct: 320 VTLSASLAAREGSTSMAAFQVCLQVWLATSLLADGYAVAGQAILASAFAKKDYKRAAATA 379

Query: 61  SLAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFD 120
           S  +++GL+ G +L  +LGA  H  A +FTKD +VL ++  G+ FV+G QP+  LA +FD
Sbjct: 380 SRVLQLGLVLGFVLAVILGAGLHFGARVFTKDDKVLHLISIGLPFVAGTQPINALAFVFD 439

Query: 121 GLHYGVSDFPYAAWSTI 138
           G+++G SDF YAA S +
Sbjct: 440 GVNFGASDFGYAAASLV 456

[Close]

BLAST of Carg18124 vs. TAIR 10
Match: AT2G38330.1 (MATE efflux family protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-25
Identity = 62/136 (45.59%), Postives = 93/136 (68.38%), Query Frame = 0


Query: 2   TVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVTS 61
           T+A S+  + G   MA HQI +++WLAV+ LT+ALA ++Q ++A+  S+ +YK A++V  
Sbjct: 327 TLATSLAAQNGPTQMAGHQIVLEIWLAVSLLTDALAIAAQSLLATTYSQGEYKQAREVLF 386

Query: 62  LAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFDG 121
             ++VGL  G  L AVL  +F   + LFT D +VL+I   G LFV+G+QP+  LA + DG
Sbjct: 387 GVLQVGLATGTGLAAVLFITFEPFSSLFTTDSEVLKIALSGTLFVAGSQPVNALAFVLDG 446

Query: 122 LHYGVSDFPYAAWSTI 138
           L+YGVSDF +AA+S +
Sbjct: 447 LYYGVSDFGFAAYSMV 462

[Close]

BLAST of Carg18124 vs. TAIR 10
Match: AT3G08040.1 (MATE efflux family protein )

HSP 1 Score: 101.3 bits (251), Expect = 6.9e-22
Identity = 51/136 (37.50%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 2   TVAMSMVTRQGAVPMAAHQICMQVWLAVTTLTEALATSSQVIVASAASKRDYKTAKKVTS 61
           T+A +M  R G  PMAA QIC+QVWL  + L + LA + Q I+A + +++DY     V S
Sbjct: 331 TLAAAMAARLGTTPMAAFQICLQVWLTSSLLNDGLAVAGQAILACSFAEKDYNKVTAVAS 390

Query: 62  LAIKVGLLAGIILCAVLGASFHSLAPLFTKDPQVLEILRKGVLFVSGAQPLIPLATLFDG 121
             +++G + G+ L   +G   +  A +F+KDP V+ ++  G+ F++  QP+  LA + DG
Sbjct: 391 RVLQMGFVLGLGLSVFVGLGLYFGAGVFSKDPAVIHLMAIGIPFIAATQPINSLAFVLDG 450

Query: 122 LHYGVSDFPYAAWSTI 138
           +++G SDF Y A+S +
Sbjct: 451 VNFGASDFAYTAYSMV 466

The following BLAST results are available for this feature:

BLAST of Carg18124 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022761.1	2.4e-72	100.00	Protein DETOXIFICATION 45, chloroplastic, partial [Cucurbita argyrosperma subsp....	[more]
KAG6589046.1	2.1e-68	88.10	Protein DETOXIFICATION 45, chloroplastic, partial [Cucurbita argyrosperma subsp....	[more]
XP_023529659.1	1.1e-64	99.27	protein DETOXIFICATION 45, chloroplastic-like isoform X2 [Cucurbita pepo subsp. ...	[more]
XP_022928234.1	1.1e-64	99.27	protein DETOXIFICATION 45, chloroplastic-like [Cucurbita moschata]	[more]
XP_023529658.1	1.1e-64	99.27	protein DETOXIFICATION 45, chloroplastic-like isoform X1 [Cucurbita pepo subsp. ...	[more]

BLAST of Carg18124 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVE7	6.5e-41	63.70	Protein DETOXIFICATION 45, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DTX4...	[more]
Q9SYD6	2.7e-26	44.53	Protein DETOXIFICATION 42 OS=Arabidopsis thaliana OX=3702 GN=DTX42 PE=2 SV=2	[more]
Q84K71	1.5e-24	45.59	Protein DETOXIFICATION 44, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DTX4...	[more]
Q9SFB0	9.8e-21	37.50	Protein DETOXIFICATION 43 OS=Arabidopsis thaliana OX=3702 GN=DTX43 PE=1 SV=1	[more]

BLAST of Carg18124 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EKA0	5.1e-65	99.27	Protein DETOXIFICATION OS=Cucurbita moschata OX=3662 GN=LOC111435128 PE=3 SV=1	[more]
A0A6J1JKC4	9.7e-64	97.81	Protein DETOXIFICATION OS=Cucurbita maxima OX=3661 GN=LOC111486599 PE=3 SV=1	[more]
A0A6J1C6G1	6.1e-42	71.01	Protein DETOXIFICATION OS=Momordica charantia OX=3673 GN=LOC111007817 PE=3 SV=1	[more]
A0A6J1C2B9	6.1e-42	71.01	Protein DETOXIFICATION OS=Momordica charantia OX=3673 GN=LOC111007817 PE=3 SV=1	[more]
A0A6J1C2N8	6.1e-42	71.01	Protein DETOXIFICATION OS=Momordica charantia OX=3673 GN=LOC111007817 PE=3 SV=1	[more]

BLAST of Carg18124 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38380.1	4.6e-42	63.70	MATE efflux family protein	[more]
AT1G51340.2	1.9e-27	44.53	MATE efflux family protein	[more]
AT1G51340.1	1.9e-27	44.53	MATE efflux family protein	[more]
AT2G38330.1	1.0e-25	45.59	MATE efflux family protein	[more]
AT3G08040.1	6.9e-22	37.50	MATE efflux family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002528	Multi antimicrobial extrusion protein	PFAM	PF01554	MatE	coord: 3..129 e-value: 4.7E-15 score: 55.6
IPR044644	Multi antimicrobial extrusion protein DinF-like	PANTHER	PTHR42893	PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED	coord: 2..138
None	No IPR available	PANTHER	PTHR42893:SF8	PROTEIN DETOXIFICATION	coord: 2..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18124-RA	Carg18124-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0042908	xenobiotic transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0042910	xenobiotic transmembrane transporter activity