Carg18103 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18103
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Expansin
Location	Carg_Chr11: 11641504 .. 11643468 (+)
RNA-Seq Expression	Carg18103
Synteny	Carg18103

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCATTTATAGCTATGATAGTCTACATGGTTCTTTTGCCAACACCCAACATCTTTGCGGCTAAGGATCAAGAGTGGAAATCTGCTACTGCAACATACACCAAAGAAATAGATGGGTCAATCGTTGCAGGTACTCTTTTCCTTCACCAGAAAACTCATAAAATTGCTAAGTGTTTAAACATGGTGTTTTATAACCGCCTAGTTCTTAAAATTTGTAAGGAGACATTTGAGTTCTTACAAATTCTAAAAATAAAAATAGGTTTTGAAAAGCTAAAGTTTTGGTTTTCTTAGCTTGGATTTTGGGATCATGAGTTAAAAAGTAGATAGCATAAAGCATAATTTTAAAAAACAAAATGTTTATCAAACGAGATCTATTTGGGTGCTCACGTGCCACCCTGCAACTCATATCCTGTGGGGGTTGTTAAAGGAATCTCTCCTCCACCTTTAGAAGATGAAGTAAAATCATTAACCATAAATGGCATTTTGTAACTGTTGAGAATTGTTGGGATGTAGTCCCACATTGACAAATTTGGGGAATGATCAAATGATTTTTTTTCCTTGCTTTGATTTTGAAATGTTCTAAAGGGTTTATAAGTGAGAAATACTATCTCTATTGGTGTGAGACCTTTTGGGGAAGCCCAAAACAAAACCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTTTCTAACATAGTATCAAAGTCATGCCCTTAACTTAGCCATGTCAATAGAATCTTCAAATGTTGAACAAAGAAGTTGTGAGCCTCAAGGAGTAGTCAAAAGTGACTCAAGTGTCAAACAAAGGGTGTATTTTGTTCGAGGACTCCAGAGAAGGAGTTGAGCCTCGATTAAGGGGAGGCTGTTTGAGGGCCTCGAAAGAGTAGTCAAAAGTGACTCAAGTGTCGAACAAAGAGTGTACTTTGTTTGAGAACTCCAGAGAAGGAGTTGAGCCTCGATTAAGGGGAGGCTGTTTGAGGGCTACATAGGCCTCAGGAGAGGCTCTATGGTATACTTTGTTCGAGCGGAAGATTGTTGAAGATTGTTGGGATGGAGTCCCACATTGGCAAATTTAGGGAATCATGGGTTTATAAGTGAGGAATACTGTCTTAATTGGTGTGAAGCCTTTTGGGGAAGCCCAAAGCAAAAGCACAAGAGCTTATGCTCAAAGTAGACAATATCATACCATCGTGGAGAGTTGTGATTTCTAACTCAAACTAGTATTTCATTTTTGTTAATGTTGCAGAGGGTGCTTGTGGTTATGGAGATCTACATAAGATTCGTTATGGAAAACATAGCGCTGGATTGAGTAGCATGCTGTTTAATGGAGGGAGTACCTGTGGAGCATGCTTTGAGCTTAGATGTGTTGACCACATCTTGTGGTGCTTGGAAGGAAGTCCGACCGTCATCCTAACCGCCACCGACTTCTGTCCTCCAAATGATGGCCTATCTTCTGATTATGGTGGATGGTGCAACTTTCCCAAAGAACACTTCGAGATGTCAGAGGCAGCATTTACTGAAATAGCAGAGAAAAAAGCAGATATTGTGCCAGTTCAATATAGGAGGTAAAATTAATCTAAATGCACATAGATTCAAACATTTTCTAATCTTCGAGCTAAGGGGAAAATCGTCTTAAATTGTGTAGGGTGAGGTGTGACAGAAGTGGTGGATTAAGATTCACAGTTAGCGGGAATTCTCGATTCTTTCAAGTTTTGATTACTAATGTTGGAATGGATGGTGAATTAGTGGCAGTGAAAGTGAAGGGATCTAGAACAGGATGGATACCTCTGGCAAGGAACTGGGGACAAAACTGGCAAAGCAATGTCAATCTTCATGGGCAACCTCTCTCTTTTGAAGTTACCTCTAGCAGTGGAAGAGCACTTACTTCCTATGGTGCTGCACCTGGAAACTGGCAGTTCGGGCAGACATTTGAAGGGAAACAATTTTGA

mRNA sequence

ATGGCTGCATTTATAGCTATGATAGTCTACATGGTTCTTTTGCCAACACCCAACATCTTTGCGGCTAAGGATCAAGAGTGGAAATCTGCTACTGCAACATACACCAAAGAAATAGATGGGTCAATCGTTGCAGGGAGTACCTGTGGAGCATGCTTTGAGCTTAGATGTGTTGACCACATCTTGTGGTGCTTGGAAGGAAGTCCGACCGTCATCCTAACCGCCACCGACTTCTGTCCTCCAAATGATGGCCTATCTTCTGATTATGGTGGATGGTGCAACTTTCCCAAAGAACACTTCGAGATGTCAGAGGCAGCATTTACTGAAATAGCAGAGAAAAAAGCAGATATTGTGCCAGTTCAATATAGGAGGGTGAGGTGTGACAGAAGTGGTGGATTAAGATTCACAGTTAGCGGGAATTCTCGATTCTTTCAAGTTTTGATTACTAATGTTGGAATGGATGGTGAATTAGTGGCAGTGAAAGTGAAGGGATCTAGAACAGGATGGATACCTCTGGCAAGGAACTGGGGACAAAACTGGCAAAGCAATGTCAATCTTCATGGGCAACCTCTCTCTTTTGAAGTTACCTCTAGCAGTGGAAGAGCACTTACTTCCTATGGTGCTGCACCTGGAAACTGGCAGTTCGGGCAGACATTTGAAGGGAAACAATTTTGA

Coding sequence (CDS)

ATGGCTGCATTTATAGCTATGATAGTCTACATGGTTCTTTTGCCAACACCCAACATCTTTGCGGCTAAGGATCAAGAGTGGAAATCTGCTACTGCAACATACACCAAAGAAATAGATGGGTCAATCGTTGCAGGGAGTACCTGTGGAGCATGCTTTGAGCTTAGATGTGTTGACCACATCTTGTGGTGCTTGGAAGGAAGTCCGACCGTCATCCTAACCGCCACCGACTTCTGTCCTCCAAATGATGGCCTATCTTCTGATTATGGTGGATGGTGCAACTTTCCCAAAGAACACTTCGAGATGTCAGAGGCAGCATTTACTGAAATAGCAGAGAAAAAAGCAGATATTGTGCCAGTTCAATATAGGAGGGTGAGGTGTGACAGAAGTGGTGGATTAAGATTCACAGTTAGCGGGAATTCTCGATTCTTTCAAGTTTTGATTACTAATGTTGGAATGGATGGTGAATTAGTGGCAGTGAAAGTGAAGGGATCTAGAACAGGATGGATACCTCTGGCAAGGAACTGGGGACAAAACTGGCAAAGCAATGTCAATCTTCATGGGCAACCTCTCTCTTTTGAAGTTACCTCTAGCAGTGGAAGAGCACTTACTTCCTATGGTGCTGCACCTGGAAACTGGCAGTTCGGGCAGACATTTGAAGGGAAACAATTTTGA

Protein sequence

MAAFIAMIVYMVLLPTPNIFAAKDQEWKSATATYTKEIDGSIVAGSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWCNFPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGMDGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNWQFGQTFEGKQF

Homology

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BLAST of Carg18103 vs. NCBI nr
Match: KAG7022780.1 (Expansin-A16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 468.4 bits (1204), Expect = 3.5e-128
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MAAFIAMIVYMVLLPTPNIFAAKDQEWKSATATYTKEIDGSIVAGSTCGACFELRCVDHI 60
           MAAFIAMIVYMVLLPTPNIFAAKDQEWKSATATYTKEIDGSIVAGSTCGACFELRCVDHI
Sbjct: 1   MAAFIAMIVYMVLLPTPNIFAAKDQEWKSATATYTKEIDGSIVAGSTCGACFELRCVDHI 60

Query: 61  LWCLEGSPTVILTATDFCPPNDGLSSDYGGWCNFPKEHFEMSEAAFTEIAEKKADIVPVQ 120
           LWCLEGSPTVILTATDFCPPNDGLSSDYGGWCNFPKEHFEMSEAAFTEIAEKKADIVPVQ
Sbjct: 61  LWCLEGSPTVILTATDFCPPNDGLSSDYGGWCNFPKEHFEMSEAAFTEIAEKKADIVPVQ 120

Query: 121 YRRVRCDRSGGLRFTVSGNSRFFQVLITNVGMDGELVAVKVKGSRTGWIPLARNWGQNWQ 180
           YRRVRCDRSGGLRFTVSGNSRFFQVLITNVGMDGELVAVKVKGSRTGWIPLARNWGQNWQ
Sbjct: 121 YRRVRCDRSGGLRFTVSGNSRFFQVLITNVGMDGELVAVKVKGSRTGWIPLARNWGQNWQ 180

Query: 181 SNVNLHGQPLSFEVTSSSGRALTSYGAAPGNWQFGQTFEGKQF 224
           SNVNLHGQPLSFEVTSSSGRALTSYGAAPGNWQFGQTFEGKQF
Sbjct: 181 SNVNLHGQPLSFEVTSSSGRALTSYGAAPGNWQFGQTFEGKQF 223

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BLAST of Carg18103 vs. NCBI nr
Match: KAG6589064.1 (Expansin-A16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 453.4 bits (1165), Expect = 1.2e-123
Identity = 223/251 (88.84%), Postives = 223/251 (88.84%), Query Frame = 0


Query: 1   MAAFIAMIVYMVLLPTPNIFAAKDQEWKSATATYTKEIDGSIVA---------------- 60
           MAAFIAMIVYMVLLPTPNIFAAKDQEWKSATATYTKEIDGSIVA                
Sbjct: 191 MAAFIAMIVYMVLLPTPNIFAAKDQEWKSATATYTKEIDGSIVAEGACGYGDLHKIRYGK 250

Query: 61  ------------GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWC 120
                       GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWC
Sbjct: 251 HSAGLSSMLFNGGSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWC 310

Query: 121 NFPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGM 180
           NFPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGM
Sbjct: 311 NFPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGM 370

Query: 181 DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNW 224
           DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNW
Sbjct: 371 DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNW 430

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BLAST of Carg18103 vs. NCBI nr
Match: KAG6589073.1 (Expansin-A16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 453.4 bits (1165), Expect = 1.2e-123
Identity = 223/251 (88.84%), Postives = 223/251 (88.84%), Query Frame = 0


Query: 1   MAAFIAMIVYMVLLPTPNIFAAKDQEWKSATATYTKEIDGSIVA---------------- 60
           MAAFIAMIVYMVLLPTPNIFAAKDQEWKSATATYTKEIDGSIVA                
Sbjct: 66  MAAFIAMIVYMVLLPTPNIFAAKDQEWKSATATYTKEIDGSIVAEGACGYGDLHKIRYGK 125

Query: 61  ------------GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWC 120
                       GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWC
Sbjct: 126 HSAGLSSMLFNGGSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWC 185

Query: 121 NFPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGM 180
           NFPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGM
Sbjct: 186 NFPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGM 245

Query: 181 DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNW 224
           DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNW
Sbjct: 246 DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNW 305

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BLAST of Carg18103 vs. NCBI nr
Match: XP_023529778.1 (expansin-A16-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 447.6 bits (1150), Expect = 6.3e-122
Identity = 218/250 (87.20%), Postives = 222/250 (88.80%), Query Frame = 0


Query: 1   MAAFIAMIVYMVLLPTPNIFAAKDQEWKSATATYTKEIDGSIVA---------------- 60
           MAAFIAMIVYMVLLPTPNIFAAKD+EWKSATATYTKEIDGSI+A                
Sbjct: 1   MAAFIAMIVYMVLLPTPNIFAAKDEEWKSATATYTKEIDGSIIAGACGYGDLHKIRYGKH 60

Query: 61  -----------GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWCN 120
                      GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWCN
Sbjct: 61  SAGLSSMLFNGGSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWCN 120

Query: 121 FPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGMD 180
           FPK+HFEMS+AAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGMD
Sbjct: 121 FPKKHFEMSKAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGMD 180

Query: 181 GELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNWQ 224
           GELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYG APGNWQ
Sbjct: 181 GELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGVAPGNWQ 240

[Close]

BLAST of Carg18103 vs. NCBI nr
Match: XP_023529777.1 (expansin-A16-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 447.2 bits (1149), Expect = 8.3e-122
Identity = 218/251 (86.85%), Postives = 222/251 (88.45%), Query Frame = 0


Query: 1   MAAFIAMIVYMVLLPTPNIFAAKDQEWKSATATYTKEIDGSIVA---------------- 60
           MAAFIAMIVYMVLLPTPNIFAAKD+EWKSATATYTKEIDGSI+A                
Sbjct: 1   MAAFIAMIVYMVLLPTPNIFAAKDEEWKSATATYTKEIDGSIIAEGACGYGDLHKIRYGK 60

Query: 61  ------------GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWC 120
                       GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWC
Sbjct: 61  HSAGLSSMLFNGGSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWC 120

Query: 121 NFPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGM 180
           NFPK+HFEMS+AAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGM
Sbjct: 121 NFPKKHFEMSKAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGM 180

Query: 181 DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNW 224
           DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYG APGNW
Sbjct: 181 DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGVAPGNW 240

[Close]

BLAST of Carg18103 vs. ExPASy Swiss-Prot
Match: Q69XV9 (Expansin-A16 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 7.4e-81
Identity = 131/191 (68.59%), Postives = 155/191 (81.15%), Query Frame = 0


Query: 34  YTKEIDGSIVA-GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWC 93
           YT  + G++   GS CG C+E+RCV+H+LWCL GSPTV++TATDFC PN GLS DYGGWC
Sbjct: 68  YTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWC 127

Query: 94  NFPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGM 153
           NFPKEHFEMSEAAF  +A+ KADIVPVQ+RRV CDR+GG+RFT++G + F QVLITNV  
Sbjct: 128 NFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAA 187

Query: 154 DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNW 213
           DGE+ AVKVKGSRTGWIP+ RNWGQNWQ + +L GQPLSFEVT   GR + +Y  AP +W
Sbjct: 188 DGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDW 247

Query: 214 QFGQTFEGKQF 224
            F QTFEGKQF
Sbjct: 248 MFAQTFEGKQF 258

[Close]

BLAST of Carg18103 vs. ExPASy Swiss-Prot
Match: Q9SZM1 (Expansin-A20 OS=Arabidopsis thaliana OX=3702 GN=EXPA20 PE=2 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 7.6e-78
Identity = 127/197 (64.47%), Postives = 161/197 (81.73%), Query Frame = 0


Query: 28  KSATATYTKEIDGSIV-AGSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSS 87
           +S+ A Y+  + G +   GS+CGAC E+RCV+HI WCL+GSP+V++TATDFCPPN GLSS
Sbjct: 58  QSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSS 117

Query: 88  DYGGWCNFPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVL 147
           DYGGWCNFPKEH E+S AAFT IAE +A+++P+QYRRV+C R GGLRF++SG+S FFQVL
Sbjct: 118 DYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVL 177

Query: 148 ITNVGMDGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYG 207
           I+NVG+DGE+V VKVKG  T WIP+ARNWGQNW S+++L GQ LSFEVT   G+ + SY 
Sbjct: 178 ISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYD 237

Query: 208 AAPGNWQFGQTFEGKQF 224
            AP  W+FG T++GKQF
Sbjct: 238 VAPPYWRFGMTYQGKQF 254

[Close]

BLAST of Carg18103 vs. ExPASy Swiss-Prot
Match: Q9M2S9 (Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.9e-60
Identity = 104/180 (57.78%), Postives = 130/180 (72.22%), Query Frame = 0


Query: 44  AGSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWCNFPKEHFEMSE 103
           +G +CGACFE++CV+   WC  G+P+V +TAT+FCPPN    SD GGWCN P+ HF+++ 
Sbjct: 79  SGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAM 138

Query: 104 AAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGMDGELVAVKVKG 163
             F +IAE +A IVP+ YRRV C +SGG+RFT++G+  F  VLITNV   G++    VKG
Sbjct: 139 PVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKG 198

Query: 164 SRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNWQFGQTFEGKQF 223
           S+TGW+ L RNWGQNWQSN  L GQ LSF VTSS  R  TS+  AP NWQFGQTF GK F
Sbjct: 199 SKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNF 258

[Close]

BLAST of Carg18103 vs. ExPASy Swiss-Prot
Match: O48818 (Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.5e-60
Identity = 104/179 (58.10%), Postives = 129/179 (72.07%), Query Frame = 0


Query: 45  GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWCNFPKEHFEMSEA 104
           G +CGACFEL+C +   WC  GSP++++TAT+FCPPN    SD GGWCN P+EHF+++  
Sbjct: 77  GMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMP 136

Query: 105 AFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGMDGELVAVKVKGS 164
            F +IA+ +A IVPV YRRV C + GG+RFT++G+  F  VLITNV   G++V   VKGS
Sbjct: 137 VFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGS 196

Query: 165 RTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNWQFGQTFEGKQF 224
           RTGW+ L+RNWGQNWQSN  L GQ LSF VT S  R  TS+   P NWQFGQTF GK F
Sbjct: 197 RTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGKNF 255

[Close]

BLAST of Carg18103 vs. ExPASy Swiss-Prot
Match: Q9LZ99 (Expansin-A9 OS=Arabidopsis thaliana OX=3702 GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.1e-59
Identity = 100/179 (55.87%), Postives = 131/179 (73.18%), Query Frame = 0


Query: 45  GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWCNFPKEHFEMSEA 104
           G +CG+CFEL+C++   WCL G+P++++TAT+FCPPN   +SD GGWCN P+EHF+++  
Sbjct: 78  GLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMP 137

Query: 105 AFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGMDGELVAVKVKGS 164
            F  IA+ KA IVPV YRR+ C + GG+RFT++G   F  VL+TNV   G+++ V VKGS
Sbjct: 138 MFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGS 197

Query: 165 RTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNWQFGQTFEGKQF 224
            T W+ L+RNWGQNWQSN  L GQ LSF V +S GR+ TS   AP NWQFGQT+ GK F
Sbjct: 198 NTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGKNF 256

[Close]

BLAST of Carg18103 vs. ExPASy TrEMBL
Match: A0A6J1EK66 (Expansin OS=Cucurbita moschata OX=3662 GN=LOC111435097 PE=3 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 5.8e-121
Identity = 219/250 (87.60%), Postives = 221/250 (88.40%), Query Frame = 0


Query: 1   MAAFIAMIVYMVLLPTPNIFAAKDQEWKSATATYTKEIDGSIVA---------------- 60
           MAAFIAMIVYMVLLPTP  FAAKD+EWKSATATYTKEIDGSI+A                
Sbjct: 1   MAAFIAMIVYMVLLPTP--FAAKDEEWKSATATYTKEIDGSIIAGACGYGDLHKIRYGKH 60

Query: 61  -----------GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWCN 120
                      GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWCN
Sbjct: 61  SAGLSSMLFNGGSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWCN 120

Query: 121 FPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGMD 180
           FPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGMD
Sbjct: 121 FPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGMD 180

Query: 181 GELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNWQ 224
           GELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNWQ
Sbjct: 181 GELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNWQ 240

[Close]

BLAST of Carg18103 vs. ExPASy TrEMBL
Match: A0A6J1EN81 (Expansin OS=Cucurbita moschata OX=3662 GN=LOC111435097 PE=3 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 7.6e-121
Identity = 219/251 (87.25%), Postives = 221/251 (88.05%), Query Frame = 0


Query: 1   MAAFIAMIVYMVLLPTPNIFAAKDQEWKSATATYTKEIDGSIVA---------------- 60
           MAAFIAMIVYMVLLPTP  FAAKD+EWKSATATYTKEIDGSI+A                
Sbjct: 1   MAAFIAMIVYMVLLPTP--FAAKDEEWKSATATYTKEIDGSIIAEGACGYGDLHKIRYGK 60

Query: 61  ------------GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWC 120
                       GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWC
Sbjct: 61  HSAGLSSMLFNGGSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWC 120

Query: 121 NFPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGM 180
           NFPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGM
Sbjct: 121 NFPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGM 180

Query: 181 DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNW 224
           DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNW
Sbjct: 181 DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNW 240

[Close]

BLAST of Carg18103 vs. ExPASy TrEMBL
Match: A0A6J1HX81 (Expansin OS=Cucurbita maxima OX=3661 GN=LOC111468291 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.8e-114
Identity = 203/251 (80.88%), Postives = 213/251 (84.86%), Query Frame = 0


Query: 1   MAAFIAMIVYMVLLPTPNIFAAKDQEWKSATATYTKEIDGSIVA---------------- 60
           MAAF+A++VY+VLL TPN+FAAKD+EWKSATATY+KE DGSIV                 
Sbjct: 1   MAAFVAIVVYLVLLQTPNLFAAKDEEWKSATATYSKETDGSIVTEGACGYGDLHKISYGK 60

Query: 61  ------------GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWC 120
                       GSTCGAC+ELRCVDHILWCL+GSPTVILTATDFCPPN GLSSDYGGWC
Sbjct: 61  YSAGLSSMLFNRGSTCGACYELRCVDHILWCLQGSPTVILTATDFCPPNYGLSSDYGGWC 120

Query: 121 NFPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGM 180
           NFPKEHFEMSEAAF EI+EKKADIVPVQYRR RCDRSGGLRFTVSGNSRFFQVLITNVGM
Sbjct: 121 NFPKEHFEMSEAAFAEISEKKADIVPVQYRRTRCDRSGGLRFTVSGNSRFFQVLITNVGM 180

Query: 181 DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNW 224
           DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGR LTSY  AP NW
Sbjct: 181 DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRTLTSYSVAPANW 240

[Close]

BLAST of Carg18103 vs. ExPASy TrEMBL
Match: A0A6J1GKZ4 (Expansin OS=Cucurbita moschata OX=3662 GN=LOC111455324 PE=3 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 4.0e-114
Identity = 201/251 (80.08%), Postives = 213/251 (84.86%), Query Frame = 0


Query: 1   MAAFIAMIVYMVLLPTPNIFAAKDQEWKSATATYTKEIDGSIVA---------------- 60
           MAAF+A++VY+VLL TPN+FAAKD+EWKSATATY+KE DGSIV                 
Sbjct: 1   MAAFVAVVVYLVLLQTPNLFAAKDEEWKSATATYSKETDGSIVTEGACGYGDLHKISYGK 60

Query: 61  ------------GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWC 120
                       GSTCGAC+ELRCVDHILWCL+GSPTV+LTATDFCPPN GLSSDYGGWC
Sbjct: 61  YSAGLSSMLFNRGSTCGACYELRCVDHILWCLQGSPTVVLTATDFCPPNYGLSSDYGGWC 120

Query: 121 NFPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGM 180
           NFPKEHFEMSEAAF EI+EKKADIVPVQYRR RCDRSGGLRFTVSGNSRFFQVLITNVGM
Sbjct: 121 NFPKEHFEMSEAAFAEISEKKADIVPVQYRRTRCDRSGGLRFTVSGNSRFFQVLITNVGM 180

Query: 181 DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNW 224
           DGELVAVKVKGSRTGWIP+ARNWGQNWQSNVNLHGQPLSFEVTSSSGR LTSY  AP NW
Sbjct: 181 DGELVAVKVKGSRTGWIPMARNWGQNWQSNVNLHGQPLSFEVTSSSGRTLTSYSVAPANW 240

[Close]

BLAST of Carg18103 vs. ExPASy TrEMBL
Match: A0A6J1C2I7 (Expansin OS=Momordica charantia OX=3673 GN=LOC111007672 PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.4e-113
Identity = 202/251 (80.48%), Postives = 212/251 (84.46%), Query Frame = 0


Query: 1   MAAFIAMIVYMVLLPTPNIFAAKDQEWKSATATYTKEIDGSIVA---------------- 60
           M AF+A+IV +VLL TPNI+ A D+EWKSATATY+KE DGSIV                 
Sbjct: 1   MVAFVAVIVCLVLLRTPNIYVANDEEWKSATATYSKETDGSIVTEGACGYGDLHKISYGK 60

Query: 61  ------------GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWC 120
                       GSTCGAC+ELRCVDHILWCL+GSPTVILTATDFCPPN GLSSDYGGWC
Sbjct: 61  HSAGLSSMLFNRGSTCGACYELRCVDHILWCLQGSPTVILTATDFCPPNYGLSSDYGGWC 120

Query: 121 NFPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGM 180
           NFP+EHFEMSEAAF EIAE+KADIVPVQYRRVRCDRSGGLRFTV GNSRFFQVLITNVGM
Sbjct: 121 NFPQEHFEMSEAAFAEIAERKADIVPVQYRRVRCDRSGGLRFTVRGNSRFFQVLITNVGM 180

Query: 181 DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNW 224
           DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYG APGNW
Sbjct: 181 DGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGVAPGNW 240

[Close]

BLAST of Carg18103 vs. TAIR 10
Match: AT4G38210.1 (expansin A20 )

HSP 1 Score: 291.6 bits (745), Expect = 5.4e-79
Identity = 127/197 (64.47%), Postives = 161/197 (81.73%), Query Frame = 0


Query: 28  KSATATYTKEIDGSIV-AGSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSS 87
           +S+ A Y+  + G +   GS+CGAC E+RCV+HI WCL+GSP+V++TATDFCPPN GLSS
Sbjct: 58  QSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSS 117

Query: 88  DYGGWCNFPKEHFEMSEAAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVL 147
           DYGGWCNFPKEH E+S AAFT IAE +A+++P+QYRRV+C R GGLRF++SG+S FFQVL
Sbjct: 118 DYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVL 177

Query: 148 ITNVGMDGELVAVKVKGSRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYG 207
           I+NVG+DGE+V VKVKG  T WIP+ARNWGQNW S+++L GQ LSFEVT   G+ + SY 
Sbjct: 178 ISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYD 237

Query: 208 AAPGNWQFGQTFEGKQF 224
            AP  W+FG T++GKQF
Sbjct: 238 VAPPYWRFGMTYQGKQF 254

[Close]

BLAST of Carg18103 vs. TAIR 10
Match: AT3G55500.1 (expansin A16 )

HSP 1 Score: 233.8 bits (595), Expect = 1.3e-61
Identity = 104/180 (57.78%), Postives = 130/180 (72.22%), Query Frame = 0


Query: 44  AGSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWCNFPKEHFEMSE 103
           +G +CGACFE++CV+   WC  G+P+V +TAT+FCPPN    SD GGWCN P+ HF+++ 
Sbjct: 79  SGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAM 138

Query: 104 AAFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGMDGELVAVKVKG 163
             F +IAE +A IVP+ YRRV C +SGG+RFT++G+  F  VLITNV   G++    VKG
Sbjct: 139 PVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKG 198

Query: 164 SRTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNWQFGQTFEGKQF 223
           S+TGW+ L RNWGQNWQSN  L GQ LSF VTSS  R  TS+  AP NWQFGQTF GK F
Sbjct: 199 SKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNF 258

[Close]

BLAST of Carg18103 vs. TAIR 10
Match: AT2G39700.1 (expansin A4 )

HSP 1 Score: 233.4 bits (594), Expect = 1.8e-61
Identity = 104/179 (58.10%), Postives = 129/179 (72.07%), Query Frame = 0


Query: 45  GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWCNFPKEHFEMSEA 104
           G +CGACFEL+C +   WC  GSP++++TAT+FCPPN    SD GGWCN P+EHF+++  
Sbjct: 77  GMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMP 136

Query: 105 AFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGMDGELVAVKVKGS 164
            F +IA+ +A IVPV YRRV C + GG+RFT++G+  F  VLITNV   G++V   VKGS
Sbjct: 137 VFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGS 196

Query: 165 RTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNWQFGQTFEGKQF 224
           RTGW+ L+RNWGQNWQSN  L GQ LSF VT S  R  TS+   P NWQFGQTF GK F
Sbjct: 197 RTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGKNF 255

[Close]

BLAST of Carg18103 vs. TAIR 10
Match: AT5G02260.1 (expansin A9 )

HSP 1 Score: 230.3 bits (586), Expect = 1.5e-60
Identity = 100/179 (55.87%), Postives = 131/179 (73.18%), Query Frame = 0


Query: 45  GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWCNFPKEHFEMSEA 104
           G +CG+CFEL+C++   WCL G+P++++TAT+FCPPN   +SD GGWCN P+EHF+++  
Sbjct: 78  GLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMP 137

Query: 105 AFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGMDGELVAVKVKGS 164
            F  IA+ KA IVPV YRR+ C + GG+RFT++G   F  VL+TNV   G+++ V VKGS
Sbjct: 138 MFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGS 197

Query: 165 RTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNWQFGQTFEGKQF 224
            T W+ L+RNWGQNWQSN  L GQ LSF V +S GR+ TS   AP NWQFGQT+ GK F
Sbjct: 198 NTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGKNF 256

[Close]

BLAST of Carg18103 vs. TAIR 10
Match: AT3G03220.1 (expansin A13 )

HSP 1 Score: 229.6 bits (584), Expect = 2.5e-60
Identity = 104/179 (58.10%), Postives = 126/179 (70.39%), Query Frame = 0


Query: 45  GSTCGACFELRCVDHILWCLEGSPTVILTATDFCPPNDGLSSDYGGWCNFPKEHFEMSEA 104
           G  CGACFELRCVD + WC+ G+ ++ILTAT+FC PN G   D GG CN P +HF +   
Sbjct: 86  GQICGACFELRCVDDLRWCIPGT-SIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIE 145

Query: 105 AFTEIAEKKADIVPVQYRRVRCDRSGGLRFTVSGNSRFFQVLITNVGMDGELVAVKVKGS 164
           AF +IA  KA  +PVQYRR+ C + G +RFTV G   F  VLITNV   G++ AVK+KGS
Sbjct: 146 AFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGS 205

Query: 165 RTGWIPLARNWGQNWQSNVNLHGQPLSFEVTSSSGRALTSYGAAPGNWQFGQTFEGKQF 224
           RTGW+P+ RNWGQNW  N +L  Q LSFEVTSS    +TSY  +P NW +GQTFEGKQF
Sbjct: 206 RTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNWNYGQTFEGKQF 263

The following BLAST results are available for this feature:

BLAST of Carg18103 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022780.1	3.5e-128	100.00	Expansin-A16, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6589064.1	1.2e-123	88.84	Expansin-A16, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6589073.1	1.2e-123	88.84	Expansin-A16, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023529778.1	6.3e-122	87.20	expansin-A16-like isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_023529777.1	8.3e-122	86.85	expansin-A16-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg18103 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q69XV9	7.4e-81	68.59	Expansin-A16 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA16 PE=2 SV=1	[more]
Q9SZM1	7.6e-78	64.47	Expansin-A20 OS=Arabidopsis thaliana OX=3702 GN=EXPA20 PE=2 SV=1	[more]
Q9M2S9	1.9e-60	57.78	Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1	[more]
O48818	2.5e-60	58.10	Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1	[more]
Q9LZ99	2.1e-59	55.87	Expansin-A9 OS=Arabidopsis thaliana OX=3702 GN=EXPA9 PE=2 SV=1	[more]

BLAST of Carg18103 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EK66	5.8e-121	87.60	Expansin OS=Cucurbita moschata OX=3662 GN=LOC111435097 PE=3 SV=1	[more]
A0A6J1EN81	7.6e-121	87.25	Expansin OS=Cucurbita moschata OX=3662 GN=LOC111435097 PE=3 SV=1	[more]
A0A6J1HX81	1.8e-114	80.88	Expansin OS=Cucurbita maxima OX=3661 GN=LOC111468291 PE=3 SV=1	[more]
A0A6J1GKZ4	4.0e-114	80.08	Expansin OS=Cucurbita moschata OX=3662 GN=LOC111455324 PE=3 SV=1	[more]
A0A6J1C2I7	4.4e-113	80.48	Expansin OS=Momordica charantia OX=3673 GN=LOC111007672 PE=3 SV=1	[more]

BLAST of Carg18103 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38210.1	5.4e-79	64.47	expansin A20	[more]
AT3G55500.1	1.3e-61	57.78	expansin A16	[more]
AT2G39700.1	1.8e-61	58.10	expansin A4	[more]
AT5G02260.1	1.5e-60	55.87	expansin A9	[more]
AT3G03220.1	2.5e-60	58.10	expansin A13	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002963	Expansin	PRINTS	PR01226	EXPANSIN	coord: 177..198 score: 64.24 coord: 70..80 score: 65.45 coord: 106..119 score: 52.62 coord: 206..222 score: 59.61 coord: 56..67 score: 37.78 coord: 130..142 score: 57.69 coord: 142..163 score: 50.3 coord: 89..106 score: 55.93
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 168..182 score: 64.0 coord: 114..130 score: 54.12 coord: 38..56 score: 39.34 coord: 206..220 score: 51.33
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 35..121 e-value: 1.1E-33 score: 127.9
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 45..131 score: 20.003286
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 42..127 e-value: 7.3E-19 score: 70.2
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 26..149
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Expansin_C	coord: 133..209 e-value: 3.3E-24 score: 84.7
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 141..220 score: 20.509825
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 131..223 e-value: 9.4E-22 score: 78.7
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	49590	PHL pollen allergen	coord: 128..220
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 45..121 e-value: 1.1E-14 score: 54.5
None	No IPR available	PANTHER	PTHR31867:SF99	EXPANSIN-A20	coord: 45..223
None	No IPR available	PANTHER	PTHR31867	EXPANSIN-A15	coord: 45..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18103-RA	Carg18103-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009664	plant-type cell wall organization
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane