Carg18096 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18096
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	SNF1-related protein kinase regulatory subunit beta-2-like isoform X1
Location	Carg_Chr11: 11678833 .. 11680598 (-)
RNA-Seq Expression	Carg18096
Synteny	Carg18096

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAATGCTGAGGGCAGCAAGAACAGAGACGAGCTCTCTGGAGTCCATAAGTTTGAGGAGAATCACGACCAAAGGATGGACTGCACAGAGGATGCAATACAAAACAGCCACCACACTCGCTCGTTTACAGACTCCAGAATTCAGATTTCTCCACAAAGCTTAGGCTCTCCTCAGGTTTGTTCTTCTGTATCTTTTTCTTAAAAAAAAGTTCATAATTATACACACACTCTCTCTCTCTCTCTCTTTCCATTCCACCCACTTCCTTGAATCCTTGAAAGAAGGAATAATTCTGGAGCTGTTTAATTGGAGGCATTTTCTTTTTGAAACTATGGGAATTTGTTCTGAGCATCCTGATATGTTAAGTAATCGAATATGCAGATTATTGTCTCTCTCTCTTAAAGCTTTTTGTTAATGCTTTGTTTACATTACAGACGATGGGTCATTCTTTTCTGTGAAACTATTGGATATATTTTTCTCCTTCACTCCATTTGAAGGCAACCTGTTAAAAAGGTTGTGCAGATTATTGTTTGTTGTCTGAAAGTATAGAAGAAAATAGAGCACCTAAAGTCGCCATTAATTGCCTAATAACTATGCCAAAAAAGGGTGTCTACACTGAGTGGGACCTTGTATTTATGAGAAGAAATCTGCCAAAAATAGTGTACCTACTTCGGTTTATTGAACCACCAATAACACTACTCTCAAATTAACCCTCTCATAGTTTTTTGTTTTCATTCATCTTCACTTCTAGTACGCTACAGTTTCCTTGTCAAGTCCTGGTCTGATGCTACAGCCTCAACCTCAATCTGTGCCTCAGAGTGCTGCTGCATTCATTGAAAATGTGTTCCATGAGACGAGGTCGCGTGTTAGGATCTCATGGAATCATGGTGGCAATCAAGTAGCCATTGTTGGATCATGGGATAACTGGCAGTCGAGGTAACCGACTTCGATGATGTGCTTTTTTCCTTCTTGTTCCGTTTCGTTTTCTTGAATCTCAACTCGAACAACCTTTGATTGTGTTGAATTTACTGTGTTTCTGTTAGAGAGTTCCTGCAGTACACTGGTGAGAAGTTTGTGGTTGTTAAAACTCTGCCGGTCGGTATCTATCACTACCACTTTATAGTTGATGGTTGGTTGGTTTATGCTCCAGATCTACCTTGGTCTCGTAATGATTCAGGGAATGCTTACAATATTTTAGACTTGCCGGTAAGTTTTGATAATTTTGTGTTCCTCAAGAATGCTATTACTGCTGCTCCACACAATTCCCATTGAACTATGTTTTCCAGGGCTATGTTTCTGAATTGCCTGAAAGTATGTTCGAGTTCGAAACTCCTCCGTCCCCGCCATCGAGTTACGACAACCAATACTTTAACGAAGATGATTTCGGCAGGCCTCCACCAGAACTACCTCCACAGCTGCAAGGAACCATTTTGAACGATCCATCTTCTTCGGTTGATGGTCGACCGTTGCCAGTTACGCCTCGAAATACAGAACTAAATCATCTCTATTTGCAGAGAAATGTCCAAGATCAGTTTTTAGCACTTGGATCTTCTCAAAGGATTCATGAAAAGTATTATACTATGTTTCTATTCAAGCCTTTGTCAAGAACAAGGTGATGTCCATACTCCTTTACTCATTCCATCCACATTTTCATTTTCGAAACTGAAATTCAGCAAATGAATCTCAATATTGCTTCAAAAGTTGCTATCCTCGTAAGTTCTGTAGGTTGAGGAAGCATTAGTGCAGCTAAAAAGAGATTCTTCTCA

mRNA sequence

ATGGACAATGCTGAGGGCAGCAAGAACAGAGACGAGCTCTCTGGAGTCCATAAGTTTGAGGAGAATCACGACCAAAGGATGGACTGCACAGAGGATGCAATACAAAACAGCCACCACACTCGCTCGTTTACAGACTCCAGAATTCAGATTTCTCCACAAAGCTTAGGCTCTCCTCAGTACGCTACAGTTTCCTTGTCAAGTCCTGGTCTGATGCTACAGCCTCAACCTCAATCTGTGCCTCAGAGTGCTGCTGCATTCATTGAAAATGTGTTCCATGAGACGAGGTCGCGTGTTAGGATCTCATGGAATCATGGTGGCAATCAAGTAGCCATTGTTGGATCATGGGATAACTGGCAGTCGAGAGAGTTCCTGCAGTACACTGGTGAGAAGTTTGTGGTTGTTAAAACTCTGCCGGTCGGTATCTATCACTACCACTTTATAGTTGATGGTTGGTTGGTTTATGCTCCAGATCTACCTTGGTCTCGTAATGATTCAGGGAATGCTTACAATATTTTAGACTTGCCGGGCTATGTTTCTGAATTGCCTGAAAGTATGTTCGAGTTCGAAACTCCTCCGTCCCCGCCATCGAGTTACGACAACCAATACTTTAACGAAGATGATTTCGGCAGGCCTCCACCAGAACTACCTCCACAGCTGCAAGGAACCATTTTGAACGATCCATCTTCTTCGGTTGATGGTCGACCGTTGCCAGTTACGCCTCGAAATACAGAACTAAATCATCTCTATTTGCAGAGAAATGTCCAAGATCAGTTTTTAGCACTTGGATCTTCTCAAAGGATTCATGAAAAGTATTATACTATGTTTCTATTCAAGCCTTTGTCAAGAACAAGGTGATGTCCATACTCCTTTACTCATTCCATCCACATTTTCATTTTCGAAACTGAAATTCAGCAAATGAATCTCAATATTGCTTCAAAAGTTGCTATCCTCGTAAGTTCTGTAGGTTGAGGAAGCATTAGTGCAGCTAAAAAGAGATTCTTCTCA

Coding sequence (CDS)

ATGGACAATGCTGAGGGCAGCAAGAACAGAGACGAGCTCTCTGGAGTCCATAAGTTTGAGGAGAATCACGACCAAAGGATGGACTGCACAGAGGATGCAATACAAAACAGCCACCACACTCGCTCGTTTACAGACTCCAGAATTCAGATTTCTCCACAAAGCTTAGGCTCTCCTCAGTACGCTACAGTTTCCTTGTCAAGTCCTGGTCTGATGCTACAGCCTCAACCTCAATCTGTGCCTCAGAGTGCTGCTGCATTCATTGAAAATGTGTTCCATGAGACGAGGTCGCGTGTTAGGATCTCATGGAATCATGGTGGCAATCAAGTAGCCATTGTTGGATCATGGGATAACTGGCAGTCGAGAGAGTTCCTGCAGTACACTGGTGAGAAGTTTGTGGTTGTTAAAACTCTGCCGGTCGGTATCTATCACTACCACTTTATAGTTGATGGTTGGTTGGTTTATGCTCCAGATCTACCTTGGTCTCGTAATGATTCAGGGAATGCTTACAATATTTTAGACTTGCCGGGCTATGTTTCTGAATTGCCTGAAAGTATGTTCGAGTTCGAAACTCCTCCGTCCCCGCCATCGAGTTACGACAACCAATACTTTAACGAAGATGATTTCGGCAGGCCTCCACCAGAACTACCTCCACAGCTGCAAGGAACCATTTTGAACGATCCATCTTCTTCGGTTGATGGTCGACCGTTGCCAGTTACGCCTCGAAATACAGAACTAAATCATCTCTATTTGCAGAGAAATGTCCAAGATCAGTTTTTAGCACTTGGATCTTCTCAAAGGATTCATGAAAAGTATTATACTATGTTTCTATTCAAGCCTTTGTCAAGAACAAGGTGA

Protein sequence

MDNAEGSKNRDELSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQYATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQSREFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSELPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTPRNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR

Homology

[Close]

BLAST of Carg18096 vs. NCBI nr
Match: KAG7022787.1 (SNF1-related protein kinase regulatory subunit beta-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 587.0 bits (1512), Expect = 8.5e-164
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MDNAEGSKNRDELSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY 60
           MDNAEGSKNRDELSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY
Sbjct: 1   MDNAEGSKNRDELSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY 60

Query: 61  ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 120
           ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS
Sbjct: 61  ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 120

Query: 121 REFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE 180
           REFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE
Sbjct: 121 REFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE 180

Query: 181 LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 240
           LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP
Sbjct: 181 LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 240

Query: 241 RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 285
           RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR
Sbjct: 241 RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 284

[Close]

BLAST of Carg18096 vs. NCBI nr
Match: KAG6589081.1 (SNF1-related protein kinase regulatory subunit beta-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 582.4 bits (1500), Expect = 2.1e-162
Identity = 282/284 (99.30%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 1   MDNAEGSKNRDELSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY 60
           MDNAE SKNRDELSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY
Sbjct: 134 MDNAESSKNRDELSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY 193

Query: 61  ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 120
           ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS
Sbjct: 194 ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 253

Query: 121 REFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE 180
           RE LQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE
Sbjct: 254 RELLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE 313

Query: 181 LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 240
           LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP
Sbjct: 314 LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 373

Query: 241 RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 285
           RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR
Sbjct: 374 RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 417

[Close]

BLAST of Carg18096 vs. NCBI nr
Match: XP_023529723.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 574.7 bits (1480), Expect = 4.4e-160
Identity = 278/284 (97.89%), Postives = 281/284 (98.94%), Query Frame = 0


Query: 1   MDNAEGSKNRDELSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY 60
           MDNAEGSKNRD+LSGVHKFEENHDQRMDCTEDAIQNSHHTR+FTDSRIQISPQSLGSPQY
Sbjct: 65  MDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRTFTDSRIQISPQSLGSPQY 124

Query: 61  ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 120
           ATVSLSSPGLML PQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS
Sbjct: 125 ATVSLSSPGLMLLPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 184

Query: 121 REFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE 180
           RE LQ TGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE
Sbjct: 185 RELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE 244

Query: 181 LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 240
           LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP
Sbjct: 245 LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 304

Query: 241 RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 285
           +NTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR
Sbjct: 305 QNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 348

[Close]

BLAST of Carg18096 vs. NCBI nr
Match: XP_023529725.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X7 [Cucurbita pepo subsp. pepo] >XP_023529726.1 SNF1-related protein kinase regulatory subunit beta-2-like isoform X7 [Cucurbita pepo subsp. pepo] >XP_023529727.1 SNF1-related protein kinase regulatory subunit beta-2-like isoform X7 [Cucurbita pepo subsp. pepo] >XP_023529728.1 SNF1-related protein kinase regulatory subunit beta-2-like isoform X7 [Cucurbita pepo subsp. pepo] >XP_023529729.1 SNF1-related protein kinase regulatory subunit beta-2-like isoform X7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 574.7 bits (1480), Expect = 4.4e-160
Identity = 278/284 (97.89%), Postives = 281/284 (98.94%), Query Frame = 0


Query: 1   MDNAEGSKNRDELSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY 60
           MDNAEGSKNRD+LSGVHKFEENHDQRMDCTEDAIQNSHHTR+FTDSRIQISPQSLGSPQY
Sbjct: 1   MDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRTFTDSRIQISPQSLGSPQY 60

Query: 61  ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 120
           ATVSLSSPGLML PQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS
Sbjct: 61  ATVSLSSPGLMLLPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 120

Query: 121 REFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE 180
           RE LQ TGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE
Sbjct: 121 RELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE 180

Query: 181 LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 240
           LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP
Sbjct: 181 LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 240

Query: 241 RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 285
           +NTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR
Sbjct: 241 QNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 284

[Close]

BLAST of Carg18096 vs. NCBI nr
Match: XP_023529719.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 574.7 bits (1480), Expect = 4.4e-160
Identity = 278/284 (97.89%), Postives = 281/284 (98.94%), Query Frame = 0


Query: 1   MDNAEGSKNRDELSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY 60
           MDNAEGSKNRD+LSGVHKFEENHDQRMDCTEDAIQNSHHTR+FTDSRIQISPQSLGSPQY
Sbjct: 68  MDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRTFTDSRIQISPQSLGSPQY 127

Query: 61  ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 120
           ATVSLSSPGLML PQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS
Sbjct: 128 ATVSLSSPGLMLLPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 187

Query: 121 REFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE 180
           RE LQ TGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE
Sbjct: 188 RELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE 247

Query: 181 LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 240
           LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP
Sbjct: 248 LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 307

Query: 241 RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 285
           +NTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR
Sbjct: 308 QNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 351

[Close]

BLAST of Carg18096 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 6.4e-45
Identity = 98/228 (42.98%), Postives = 140/228 (61.40%), Query Frame = 0


Query: 57  SPQYATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWD 116
           +PQ   + L  P  +  P P S  QS ++  E   +E      I+W HGG ++A+ GSWD
Sbjct: 64  APQVPVLPLQRPDEIHIPNP-SWMQSPSSLYEEASNEQGIPTMITWCHGGKEIAVEGSWD 123

Query: 117 NWQSREFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPG 176
           NW++R  LQ +G+ F ++K LP G+Y Y FIVDG   +AP+LP +R+D+GN +NILDL  
Sbjct: 124 NWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLARDDAGNTFNILDLQD 183

Query: 177 YVSELPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVD-GRP 236
           YV E  +S+  FE P SP +SY N     +D+ + PP +PP LQ T+LN P+++ D   P
Sbjct: 184 YVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSP 243

Query: 237 LPVTPRNTELNHLYLQRNVQ-DQFLALGSSQRIHEKYYTMFLFKPLSR 283
           LP  P++  LNHLY+Q+       +ALGS+ R   KY T+ L+K L R
Sbjct: 244 LP-RPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 289

[Close]

BLAST of Carg18096 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 9.8e-38
Identity = 103/288 (35.76%), Postives = 148/288 (51.39%), Query Frame = 0


Query: 1   MDNAEGSKNRDELSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQS-LGSPQ 60
           M NA G K+ D  +G    +           D    S H R  +DS     P S   SP 
Sbjct: 1   MGNANG-KDEDAAAGSGGADVTSSSARSNGGDPSARSRHRRPSSDSMSSSPPGSPARSPS 60

Query: 61  YATVSLSSPGLMLQ----PQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSW 120
               +   P   LQ    P P ++  + +  + +   E      I+WN GGN VA+ GSW
Sbjct: 61  PFLFAPQVPVAPLQRANAPPPNNIQWNQSQRVFDNPPEQGIPTIITWNQGGNDVAVEGSW 120

Query: 121 DNWQSREFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLP 180
           DNW+SR+ LQ +G+   ++  LP GIYHY  IVDG   Y PDLP+  ++ GN  NILD+ 
Sbjct: 121 DNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDVH 180

Query: 181 GYVSELPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRP 240
            +V E PES+ EFE PPSP  SY       +D+ + P  +PPQL  T+L     + +   
Sbjct: 181 NFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLL----GTTEETA 240

Query: 241 LPVTPRNTELNHLYLQRNVQDQ-FLALGSSQRIHEKYYTMFLFKPLSR 283
           +   P++  LNH+++++    Q  +ALG + R   KY T+ L+KPL+R
Sbjct: 241 IATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283

[Close]

BLAST of Carg18096 vs. ExPASy Swiss-Prot
Match: O43741 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.6e-18
Identity = 65/194 (33.51%), Postives = 96/194 (49.48%), Query Frame = 0


Query: 100 ISWNHGGNQVAIVGSWDNWQSREFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLP 159
           I W+ GG +V I GS++NW ++  L  +   FV +  LP G + Y F VDG  V+ P  P
Sbjct: 81  IRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEP 140

Query: 160 WSRNDSGNAYNIL-----DLPGYVSELPESMFEFET-----PPSPPSSYDNQY--FNEDD 219
              +  G   N++     D   + +   +SM   ET       SPP  Y  +   F  ++
Sbjct: 141 VVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYAFRSEE 200

Query: 220 FGRPPPELPPQLQGTILN-DPSSSVDGRPLPVTPRNTELNHLYLQRNVQDQFLALGSSQR 279
             + PP LPP L   ILN D + S D   LP  P +  LNHLY   +++D  + L ++ R
Sbjct: 201 RFKSPPILPPHLLQVILNKDTNISCDPALLP-EPNHVMLNHLY-ALSIKDSVMVLSATHR 260

Query: 280 IHEKYYTMFLFKPL 281
             +KY T  L+KP+
Sbjct: 261 YKKKYVTTLLYKPI 272

[Close]

BLAST of Carg18096 vs. ExPASy Swiss-Prot
Match: Q6PAM0 (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.6e-18
Identity = 65/194 (33.51%), Postives = 96/194 (49.48%), Query Frame = 0


Query: 100 ISWNHGGNQVAIVGSWDNWQSREFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLP 159
           I W+ GG +V I GS++NW ++  L  +   FV +  LP G + Y F VDG  V+ P  P
Sbjct: 80  IRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEP 139

Query: 160 WSRNDSGNAYNIL-----DLPGYVSELPESMFEFET-----PPSPPSSYDNQ--YFNEDD 219
              +  G   N++     D   + +   +SM   ET       SPP  Y  +   F  ++
Sbjct: 140 VVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYVFRSEE 199

Query: 220 FGRPPPELPPQLQGTILN-DPSSSVDGRPLPVTPRNTELNHLYLQRNVQDQFLALGSSQR 279
             + PP LPP L   ILN D + S D   LP  P +  LNHLY   +++D  + L ++ R
Sbjct: 200 RFKSPPILPPHLLQVILNKDTNISCDPALLP-EPNHVMLNHLY-ALSIKDSVMVLSATHR 259

Query: 280 IHEKYYTMFLFKPL 281
             +KY T  L+KP+
Sbjct: 260 YKKKYVTTLLYKPI 271

[Close]

BLAST of Carg18096 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-17
Identity = 65/194 (33.51%), Postives = 95/194 (48.97%), Query Frame = 0


Query: 100 ISWNHGGNQVAIVGSWDNWQSREFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLP 159
           I W+ GG +V I GS++NW ++  L  +   FV +  LP G + Y F VDG  V+ P  P
Sbjct: 80  IRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEP 139

Query: 160 WSRNDSGNAYNIL-----DLPGYVSELPESMFEFET-----PPSPPSSYDNQ--YFNEDD 219
              +  G   N++     D   + +   +SM   ET       SPP  Y  +   F  ++
Sbjct: 140 VVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYVFRSEE 199

Query: 220 FGRPPPELPPQLQGTILN-DPSSSVDGRPLPVTPRNTELNHLYLQRNVQDQFLALGSSQR 279
             + PP LPP L   ILN D + S D   LP  P +  LNHLY   + +D  + L ++ R
Sbjct: 200 RFKSPPILPPHLLQVILNKDTNISCDPALLP-EPNHVMLNHLY-ALSTKDSVMVLSATHR 259

Query: 280 IHEKYYTMFLFKPL 281
             +KY T  L+KP+
Sbjct: 260 YKKKYVTTLLYKPI 271

[Close]

BLAST of Carg18096 vs. ExPASy TrEMBL
Match: A0A6J1ENT9 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X9 OS=Cucurbita moschata OX=3662 GN=LOC111435212 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 2.8e-160
Identity = 279/284 (98.24%), Postives = 280/284 (98.59%), Query Frame = 0


Query: 1   MDNAEGSKNRDELSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY 60
           MDNAEGSKNRD+LSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY
Sbjct: 1   MDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY 60

Query: 61  ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 120
           ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS
Sbjct: 61  ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 120

Query: 121 REFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE 180
           RE LQ TGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPW RNDSGNAYNILDLPGYVSE
Sbjct: 121 RELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFRNDSGNAYNILDLPGYVSE 180

Query: 181 LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 240
           LPESMFEFETPPSPPSSYDNQYFNEDDF RPPPELPPQLQGTILNDPSSSVDGRPLPVTP
Sbjct: 181 LPESMFEFETPPSPPSSYDNQYFNEDDFCRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 240

Query: 241 RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 285
           RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR
Sbjct: 241 RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 284

[Close]

BLAST of Carg18096 vs. ExPASy TrEMBL
Match: A0A6J1ERH6 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435212 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 2.8e-160
Identity = 279/284 (98.24%), Postives = 280/284 (98.59%), Query Frame = 0


Query: 1   MDNAEGSKNRDELSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY 60
           MDNAEGSKNRD+LSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY
Sbjct: 72  MDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY 131

Query: 61  ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 120
           ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS
Sbjct: 132 ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 191

Query: 121 REFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE 180
           RE LQ TGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPW RNDSGNAYNILDLPGYVSE
Sbjct: 192 RELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFRNDSGNAYNILDLPGYVSE 251

Query: 181 LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 240
           LPESMFEFETPPSPPSSYDNQYFNEDDF RPPPELPPQLQGTILNDPSSSVDGRPLPVTP
Sbjct: 252 LPESMFEFETPPSPPSSYDNQYFNEDDFCRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 311

Query: 241 RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 285
           RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR
Sbjct: 312 RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 355

[Close]

BLAST of Carg18096 vs. ExPASy TrEMBL
Match: A0A6J1ERI1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X7 OS=Cucurbita moschata OX=3662 GN=LOC111435212 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 2.8e-160
Identity = 279/284 (98.24%), Postives = 280/284 (98.59%), Query Frame = 0


Query: 1   MDNAEGSKNRDELSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY 60
           MDNAEGSKNRD+LSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY
Sbjct: 65  MDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY 124

Query: 61  ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 120
           ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS
Sbjct: 125 ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 184

Query: 121 REFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE 180
           RE LQ TGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPW RNDSGNAYNILDLPGYVSE
Sbjct: 185 RELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFRNDSGNAYNILDLPGYVSE 244

Query: 181 LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 240
           LPESMFEFETPPSPPSSYDNQYFNEDDF RPPPELPPQLQGTILNDPSSSVDGRPLPVTP
Sbjct: 245 LPESMFEFETPPSPPSSYDNQYFNEDDFCRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 304

Query: 241 RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 285
           RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR
Sbjct: 305 RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 348

[Close]

BLAST of Carg18096 vs. ExPASy TrEMBL
Match: A0A6J1EJP0 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111435212 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 2.8e-160
Identity = 279/284 (98.24%), Postives = 280/284 (98.59%), Query Frame = 0


Query: 1   MDNAEGSKNRDELSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY 60
           MDNAEGSKNRD+LSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY
Sbjct: 60  MDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY 119

Query: 61  ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 120
           ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS
Sbjct: 120 ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 179

Query: 121 REFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE 180
           RE LQ TGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPW RNDSGNAYNILDLPGYVSE
Sbjct: 180 RELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFRNDSGNAYNILDLPGYVSE 239

Query: 181 LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 240
           LPESMFEFETPPSPPSSYDNQYFNEDDF RPPPELPPQLQGTILNDPSSSVDGRPLPVTP
Sbjct: 240 LPESMFEFETPPSPPSSYDNQYFNEDDFCRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 299

Query: 241 RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 285
           RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR
Sbjct: 300 RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 343

[Close]

BLAST of Carg18096 vs. ExPASy TrEMBL
Match: A0A6J1EK37 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111435212 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 2.8e-160
Identity = 279/284 (98.24%), Postives = 280/284 (98.59%), Query Frame = 0


Query: 1   MDNAEGSKNRDELSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY 60
           MDNAEGSKNRD+LSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY
Sbjct: 65  MDNAEGSKNRDDLSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQSLGSPQY 124

Query: 61  ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 120
           ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS
Sbjct: 125 ATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWDNWQS 184

Query: 121 REFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPGYVSE 180
           RE LQ TGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPW RNDSGNAYNILDLPGYVSE
Sbjct: 185 RELLQNTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWFRNDSGNAYNILDLPGYVSE 244

Query: 181 LPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 240
           LPESMFEFETPPSPPSSYDNQYFNEDDF RPPPELPPQLQGTILNDPSSSVDGRPLPVTP
Sbjct: 245 LPESMFEFETPPSPPSSYDNQYFNEDDFCRPPPELPPQLQGTILNDPSSSVDGRPLPVTP 304

Query: 241 RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 285
           RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR
Sbjct: 305 RNTELNHLYLQRNVQDQFLALGSSQRIHEKYYTMFLFKPLSRTR 348

[Close]

BLAST of Carg18096 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 182.6 bits (462), Expect = 4.5e-46
Identity = 98/228 (42.98%), Postives = 140/228 (61.40%), Query Frame = 0


Query: 57  SPQYATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWD 116
           +PQ   + L  P  +  P P S  QS ++  E   +E      I+W HGG ++A+ GSWD
Sbjct: 34  APQVPVLPLQRPDEIHIPNP-SWMQSPSSLYEEASNEQGIPTMITWCHGGKEIAVEGSWD 93

Query: 117 NWQSREFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPG 176
           NW++R  LQ +G+ F ++K LP G+Y Y FIVDG   +AP+LP +R+D+GN +NILDL  
Sbjct: 94  NWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLARDDAGNTFNILDLQD 153

Query: 177 YVSELPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVD-GRP 236
           YV E  +S+  FE P SP +SY N     +D+ + PP +PP LQ T+LN P+++ D   P
Sbjct: 154 YVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSP 213

Query: 237 LPVTPRNTELNHLYLQRNVQ-DQFLALGSSQRIHEKYYTMFLFKPLSR 283
           LP  P++  LNHLY+Q+       +ALGS+ R   KY T+ L+K L R
Sbjct: 214 LP-RPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 259

[Close]

BLAST of Carg18096 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 182.6 bits (462), Expect = 4.5e-46
Identity = 98/228 (42.98%), Postives = 140/228 (61.40%), Query Frame = 0


Query: 57  SPQYATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWD 116
           +PQ   + L  P  +  P P S  QS ++  E   +E      I+W HGG ++A+ GSWD
Sbjct: 36  APQVPVLPLQRPDEIHIPNP-SWMQSPSSLYEEASNEQGIPTMITWCHGGKEIAVEGSWD 95

Query: 117 NWQSREFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPG 176
           NW++R  LQ +G+ F ++K LP G+Y Y FIVDG   +AP+LP +R+D+GN +NILDL  
Sbjct: 96  NWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLARDDAGNTFNILDLQD 155

Query: 177 YVSELPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVD-GRP 236
           YV E  +S+  FE P SP +SY N     +D+ + PP +PP LQ T+LN P+++ D   P
Sbjct: 156 YVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSP 215

Query: 237 LPVTPRNTELNHLYLQRNVQ-DQFLALGSSQRIHEKYYTMFLFKPLSR 283
           LP  P++  LNHLY+Q+       +ALGS+ R   KY T+ L+K L R
Sbjct: 216 LP-RPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 261

[Close]

BLAST of Carg18096 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 176.8 bits (447), Expect = 2.5e-44
Identity = 97/228 (42.54%), Postives = 139/228 (60.96%), Query Frame = 0


Query: 57  SPQYATVSLSSPGLMLQPQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSWD 116
           +PQ   + L  P  +  P P S  QS ++  E   +E      I+W HGG ++A+ GSWD
Sbjct: 34  APQVPVLPLQRPDEIHIPNP-SWMQSPSSLYEEASNEQGIPTMITWCHGGKEIAVEGSWD 93

Query: 117 NWQSREFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLPG 176
           NW++   LQ +G+ F ++K LP G+Y Y FIVDG   +AP+LP +R+D+GN +NILDL  
Sbjct: 94  NWKTSR-LQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLARDDAGNTFNILDLQD 153

Query: 177 YVSELPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVD-GRP 236
           YV E  +S+  FE P SP +SY N     +D+ + PP +PP LQ T+LN P+++ D   P
Sbjct: 154 YVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSP 213

Query: 237 LPVTPRNTELNHLYLQRNVQ-DQFLALGSSQRIHEKYYTMFLFKPLSR 283
           LP  P++  LNHLY+Q+       +ALGS+ R   KY T+ L+K L R
Sbjct: 214 LP-RPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 258

[Close]

BLAST of Carg18096 vs. TAIR 10
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 159.8 bits (403), Expect = 3.1e-39
Identity = 80/184 (43.48%), Postives = 114/184 (61.96%), Query Frame = 0


Query: 100 ISWNHGGNQVAIVGSWDNWQSREFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLP 159
           I+WN GGN VA+ GSWDNW+SR+ LQ +G+   ++  LP GIYHY  IVDG   Y PDLP
Sbjct: 141 ITWNQGGNDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLP 200

Query: 160 WSRNDSGNAYNILDLPGYVSELPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQL 219
           +  ++ GN  NILD+  +V E PES+ EFE PPSP  SY       +D+ + P  +PPQL
Sbjct: 201 FVADEVGNVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQL 260

Query: 220 QGTILNDPSSSVDGRPLPVTPRNTELNHLYLQRNVQDQ-FLALGSSQRIHEKYYTMFLFK 279
             T+L     + +   +   P++  LNH+++++    Q  +ALG + R   KY T+ L+K
Sbjct: 261 HLTLL----GTTEETAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYK 320

Query: 280 PLSR 283
           PL+R
Sbjct: 321 PLTR 320

[Close]

BLAST of Carg18096 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 158.7 bits (400), Expect = 7.0e-39
Identity = 103/288 (35.76%), Postives = 148/288 (51.39%), Query Frame = 0


Query: 1   MDNAEGSKNRDELSGVHKFEENHDQRMDCTEDAIQNSHHTRSFTDSRIQISPQS-LGSPQ 60
           M NA G K+ D  +G    +           D    S H R  +DS     P S   SP 
Sbjct: 1   MGNANG-KDEDAAAGSGGADVTSSSARSNGGDPSARSRHRRPSSDSMSSSPPGSPARSPS 60

Query: 61  YATVSLSSPGLMLQ----PQPQSVPQSAAAFIENVFHETRSRVRISWNHGGNQVAIVGSW 120
               +   P   LQ    P P ++  + +  + +   E      I+WN GGN VA+ GSW
Sbjct: 61  PFLFAPQVPVAPLQRANAPPPNNIQWNQSQRVFDNPPEQGIPTIITWNQGGNDVAVEGSW 120

Query: 121 DNWQSREFLQYTGEKFVVVKTLPVGIYHYHFIVDGWLVYAPDLPWSRNDSGNAYNILDLP 180
           DNW+SR+ LQ +G+   ++  LP GIYHY  IVDG   Y PDLP+  ++ GN  NILD+ 
Sbjct: 121 DNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDVH 180

Query: 181 GYVSELPESMFEFETPPSPPSSYDNQYFNEDDFGRPPPELPPQLQGTILNDPSSSVDGRP 240
            +V E PES+ EFE PPSP  SY       +D+ + P  +PPQL  T+L     + +   
Sbjct: 181 NFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLL----GTTEETA 240

Query: 241 LPVTPRNTELNHLYLQRNVQDQ-FLALGSSQRIHEKYYTMFLFKPLSR 283
           +   P++  LNH+++++    Q  +ALG + R   KY T+ L+KPL+R
Sbjct: 241 IATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283

The following BLAST results are available for this feature:

BLAST of Carg18096 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022787.1	8.5e-164	100.00	SNF1-related protein kinase regulatory subunit beta-2, partial [Cucurbita argyro...	[more]
KAG6589081.1	2.1e-162	99.30	SNF1-related protein kinase regulatory subunit beta-2, partial [Cucurbita argyro...	[more]
XP_023529723.1	4.4e-160	97.89	SNF1-related protein kinase regulatory subunit beta-2-like isoform X5 [Cucurbita...	[more]
XP_023529725.1	4.4e-160	97.89	SNF1-related protein kinase regulatory subunit beta-2-like isoform X7 [Cucurbita...	[more]
XP_023529719.1	4.4e-160	97.89	SNF1-related protein kinase regulatory subunit beta-2-like isoform X1 [Cucurbita...	[more]

BLAST of Carg18096 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCY5	6.4e-45	42.98	SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX...	[more]
Q84VQ1	9.8e-38	35.76	SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX...	[more]
O43741	6.6e-18	33.51	5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2...	[more]
Q6PAM0	6.6e-18	33.51	5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab...	[more]
Q9QZH4	1.5e-17	33.51	5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=...	[more]

BLAST of Carg18096 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ENT9	2.8e-160	98.24	SNF1-related protein kinase regulatory subunit beta-2-like isoform X9 OS=Cucurbi...	[more]
A0A6J1ERH6	2.8e-160	98.24	SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 OS=Cucurbi...	[more]
A0A6J1ERI1	2.8e-160	98.24	SNF1-related protein kinase regulatory subunit beta-2-like isoform X7 OS=Cucurbi...	[more]
A0A6J1EJP0	2.8e-160	98.24	SNF1-related protein kinase regulatory subunit beta-2-like isoform X4 OS=Cucurbi...	[more]
A0A6J1EK37	2.8e-160	98.24	SNF1-related protein kinase regulatory subunit beta-2-like isoform X3 OS=Cucurbi...	[more]

BLAST of Carg18096 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16360.1	4.5e-46	42.98	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.3	4.5e-46	42.98	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.2	2.5e-44	42.54	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.2	3.1e-39	43.48	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.1	7.0e-39	35.76	5'-AMP-activated protein kinase beta-2 subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006828	Association with the SNF1 complex (ASC) domain	SMART	SM01010	AMPKBI_2	coord: 191..280 e-value: 6.1E-10 score: 49.0
IPR006828	Association with the SNF1 complex (ASC) domain	PFAM	PF04739	AMPKBI	coord: 210..279 e-value: 1.0E-12 score: 48.1
None	No IPR available	GENE3D	6.20.250.60		coord: 185..280 e-value: 3.6E-19 score: 70.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR46316:SF6	SNF1-RELATED KINASE REGULATORY SUBUNIT BETA-2	coord: 1..283
None	No IPR available	CDD	cd02859	E_set_AMPKbeta_like_N	coord: 98..173 e-value: 5.23816E-19 score: 77.6392
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 90..176 e-value: 4.2E-19 score: 70.2
IPR032640	AMP-activated protein kinase, glycogen-binding domain	PFAM	PF16561	AMPK1_CBM	coord: 98..173 e-value: 6.2E-23 score: 80.8
IPR043554	SNF1-related protein kinase regulatory subunit beta	PANTHER	PTHR46316	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1	coord: 1..283
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 97..174
IPR037256	ASC domain superfamily	SUPERFAMILY	160219	AMPKBI-like	coord: 178..280

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18096-RA	Carg18096-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding