Carg18082 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18082
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein CHROMATIN REMODELING 4-like isoform X1
Location	Carg_Chr11: 11757990 .. 11760941 (-)
RNA-Seq Expression	Carg18082
Synteny	Carg18082

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGTTACTATGTAGAATAATTTTCCGAGGGGAAATGGAATCGTTCATCATATCGAATTGAGAAAGAAGTTTTGTGTTGATTGAGCTCTGAAGATTCTGAAAGATTAGGGTTCGGACTTGCACCGGAAGAAGATGAGGACCAAGAGTCGCCGTGGCGGAAGGTCCAGGCCTTCCCGGCGTTCCTCCGATTCTTATCCGTCGTTTATGGCGTCTCCCTCCGTCCCTGACCGGGTGCGTATTCATTTCTCTTTCTTTGTAGCAATGGAGCCATTTTGTTTTTTTCTTCTCGCAAAACAAGTCGTCTCACTGTTCTGTTGCTTTTCGCGACTGTAACTGTTCTCTAATCCACGAGGATACCGTTTTTACTTTCTCGGATTTCGCCGAGAAATCGTTGACAAACTTAGTTTTTAGTCTCGAACTGTTTTTTTTTTTTTTTTCTTTTTTTTACAAATTCGAAGAGAGGGAAGAGAATGTTTACTGAAAGTTTCTTCGCTGAAAAAATGATGGATATGTATCTGGTCAGGATATGCCGAATGCCGAAGACAACACTTTGAATGATGGATTTGTATCTGGTCAGGATGCGTGCAATGCAGAAGATAACGCTCTGAATGAGGCATCAAGGAAGGAAACTCACGATGTGCTGGATAAGGAAGATTGTTTTCAGAAAGACACTTGTATTAGATGCGATGAGGGTGGTGGCTTGTTGGTCTGTACTGAAATTGGATGTCCAATTGCTCTTCATGAGTACTGTATGTCCTGCAAACCCTCGTTCGATGAAGAGGGGCGATTCTATTGTCCTTATTGTTCATATAAAAGAGCTTTGGTTATTGTGAATGAGCTAAGGAGAAAGGCTATGGCGGCAAAGAGGAAGTTATCTGATTTCATTGATAACAGGATGGTTAGTGGTGCCAATTCACCGCAGTTAGGAGAGGCAGGTAAGAAGAAAATAACTGATGTATCAACTTGTGGAGTAGATGTGGATCTGCCTAATCACGAGAGTTCGCGAGATCAGGAGGATATCCAGGTTGGGCAAAATCAAAGTAATCAAAGGGAGGACCATGCGAGAACAGCAGGAGATGTTCCACTATCGACGATGATGGGGGTTAACAGCAAAAATCATGAGGGTCCTAGCGTGTCTAGTGTTAGCAACGGCATACATTCTACTCATGAAGTTCAGCCATGTGAGGATGCTATGAATGAAGATGGAACTCATCAGGATGGAAGTTTAGAAGATAAAGAAGATGGGAAAACGATGGAAGAAGAAAACTTAAGGTTCACAGATGACATTGAGGACAAAGAGATCGTGAAGGATCAAGGTCAACCCGAGATTCAGAATGATGAGGAAGAGATTGCTGTAGATGACGTTGATCTTGGGGCAGGACAAGCATCTCAAGACACAGGTGATGGTGCAGAACGAATCCAGCCTGAAAATATCCATCCTGCATCTGGAAATAATGATTTGAAGAATGAAACGTTCGTGAAGAAAAAGCGCTTCAAAATGAAAGCTAATAGGAAAGTAGACCGGAAGGATTTTAATTCTCCTAGAATGTCATTGCGTCGACAAACTCCAGATCATGGGACAAAGTCACCTCATATGCAAACTCCAAAACGGGAGAAAACATCTCCTCATATACAAACACCAAAGTCTGGGAAAGATCGATCAACCAAAGTCGAGAAAGTTTCTACGTCTGGAAAGTTAAAGATGAAACCATCGTCGCCTAATCAATTGTAAGTCTCATCGTAGGCTGTCATTCGATTTCTATATTACTGGATTGCAGTACGTTGGTGGGTGTCTTTCTGAAGTTTCTGATACTCATAAGCAATTGCAACTAACTATCAATTCCTGATTTGCAGCAAAAACTTGATGTTTCACGGTGAGAAGCGTAAGAGAATGCGATGGTCTACCGAAGAGGAGGACATGTTGAAGGTACTAGTTCATCAATTGATCAATAAAGATGTTTTGACTTTTAGCATCTGGAATTGTTATTAGATTCCCATCTTCCAGACTAGAATCAAGTGATAACGTCTAACTCCCACCGTTTGCTTAATATTGACATCACTATAAAACATTCTAGTTTTGCAGGACATTAGTTTGGGAACAAATAATTCAAATTAAATATTTCAAAAGGGTATGCTTATATTTGAACGCACCTGGCATGATTCTTTTGTGTTTCTCATCCAAGTGTTGGCGAAGCTGATTGAAATCATCCACTCTGTAGAACAGTTTTCTTGTGATTTCTTCATACATTTTTTCAACTGAAAAATCTTGATTGTGCTGCATAATGCATGTAATACTTAAAGGATGCTCGAGTTCATGCTGCTTCGGTTTTCGTTCGCACTCGATGCATTTGTGTAGTGTACTGATATGTGCGAACTCTTTTCCAAATTTCCATTGAACATATGTTGATCAGGAGAAGAAATGGCCCAAAACTACATTGTTTTTGAATCATTATTTGCTTCTCATTGTGCTAACAAAAATGACCTTTTTTTTTCAGGAAGGAGTTCAGAGATTCTCTTCTTCAGTAAACAAAAATCTTCCGTGGAGGAAAATTTTGGAATTCGGTCGTCATATATTTGATGACACTCGTACTCCAGTTGACCTGAAAGATAAATGGAGAAATATTGTGGACAAGTAGTTGCAATGGATTACTAGAAGGTAACTTCCATAACGATTAATAGCAAGGTAATCGATGTATAATTATGTTCGAATTTTCCTCTCGGGTCATGTCCTCTTTGTAAATGGTGGGGCTCTAACTATTCGTTTTCGTGTTCGAAGTTTAGTTAAAAGATAGATAGGTTTAAATCGTATTTTGGTTCAGTTCAACTTCGTACTTGTATTCTCTGAACATTTTGGTTCGTGTAATTTGAGCTTTTGTTCATTTGGTCCATACACCCTCAAAATTCAAACATAAACTTCATACACAATAGCTTTGGTTCTTTTGGCAAAATTCG

mRNA sequence

ACTGTTACTATGTAGAATAATTTTCCGAGGGGAAATGGAATCGTTCATCATATCGAATTGAGAAAGAAGTTTTGTGTTGATTGAGCTCTGAAGATTCTGAAAGATTAGGGTTCGGACTTGCACCGGAAGAAGATGAGGACCAAGAGTCGCCGTGGCGGAAGGTCCAGGCCTTCCCGGCGTTCCTCCGATTCTTATCCGTCGTTTATGGCGTCTCCCTCCGTCCCTGACCGGGATATGCCGAATGCCGAAGACAACACTTTGAATGATGGATTTGTATCTGGTCAGGATGCGTGCAATGCAGAAGATAACGCTCTGAATGAGGCATCAAGGAAGGAAACTCACGATGTGCTGGATAAGGAAGATTGTTTTCAGAAAGACACTTGTATTAGATGCGATGAGGGTGGTGGCTTGTTGGTCTGTACTGAAATTGGATGTCCAATTGCTCTTCATGAGTACTGTATGTCCTGCAAACCCTCGTTCGATGAAGAGGGGCGATTCTATTGTCCTTATTGTTCATATAAAAGAGCTTTGGTTATTGTGAATGAGCTAAGGAGAAAGGCTATGGCGGCAAAGAGGAAGTTATCTGATTTCATTGATAACAGGATGGTTAGTGGTGCCAATTCACCGCAGTTAGGAGAGGCAGGTAAGAAGAAAATAACTGATGTATCAACTTGTGGAGTAGATGTGGATCTGCCTAATCACGAGAGTTCGCGAGATCAGGAGGATATCCAGGTTGGGCAAAATCAAAGTAATCAAAGGGAGGACCATGCGAGAACAGCAGGAGATGTTCCACTATCGACGATGATGGGGGTTAACAGCAAAAATCATGAGGGTCCTAGCGTGTCTAGTGTTAGCAACGGCATACATTCTACTCATGAAGTTCAGCCATGTGAGGATGCTATGAATGAAGATGGAACTCATCAGGATGGAAGTTTAGAAGATAAAGAAGATGGGAAAACGATGGAAGAAGAAAACTTAAGGTTCACAGATGACATTGAGGACAAAGAGATCGTGAAGGATCAAGGTCAACCCGAGATTCAGAATGATGAGGAAGAGATTGCTGTAGATGACGTTGATCTTGGGGCAGGACAAGCATCTCAAGACACAGGTGATGGTGCAGAACGAATCCAGCCTGAAAATATCCATCCTGCATCTGGAAATAATGATTTGAAGAATGAAACGTTCGTGAAGAAAAAGCGCTTCAAAATGAAAGCTAATAGGAAAGTAGACCGGAAGGATTTTAATTCTCCTAGAATGTCATTGCGTCGACAAACTCCAGATCATGGGACAAAGTCACCTCATATGCAAACTCCAAAACGGGAGAAAACATCTCCTCATATACAAACACCAAAGTCTGGGAAAGATCGATCAACCAAAGTCGAGAAAGTTTCTACGTCTGGAAAGTTAAAGATGAAACCATCGTCGCCTAATCAATTCAAAAACTTGATGTTTCACGGTGAGAAGCGTAAGAGAATGCGATGGTCTACCGAAGAGGAGGACATGTTGAAGGAAGGAGTTCAGAGATTCTCTTCTTCAGTAAACAAAAATCTTCCGTGGAGGAAAATTTTGGAATTCGGTCGTCATATATTTGATGACACTCGTACTCCAGTTGACCTGAAAGATAAATGGAGAAATATTGTGGACAAGTAGTTGCAATGGATTACTAGAAGGTAACTTCCATAACGATTAATAGCAAGGTAATCGATGTATAATTATGTTCGAATTTTCCTCTCGGGTCATGTCCTCTTTGTAAATGGTGGGGCTCTAACTATTCGTTTTCGTGTTCGAAGTTTAGTTAAAAGATAGATAGGTTTAAATCGTATTTTGGTTCAGTTCAACTTCGTACTTGTATTCTCTGAACATTTTGGTTCGTGTAATTTGAGCTTTTGTTCATTTGGTCCATACACCCTCAAAATTCAAACATAAACTTCATACACAATAGCTTTGGTTCTTTTGGCAAAATTCG

Coding sequence (CDS)

ATGAGGACCAAGAGTCGCCGTGGCGGAAGGTCCAGGCCTTCCCGGCGTTCCTCCGATTCTTATCCGTCGTTTATGGCGTCTCCCTCCGTCCCTGACCGGGATATGCCGAATGCCGAAGACAACACTTTGAATGATGGATTTGTATCTGGTCAGGATGCGTGCAATGCAGAAGATAACGCTCTGAATGAGGCATCAAGGAAGGAAACTCACGATGTGCTGGATAAGGAAGATTGTTTTCAGAAAGACACTTGTATTAGATGCGATGAGGGTGGTGGCTTGTTGGTCTGTACTGAAATTGGATGTCCAATTGCTCTTCATGAGTACTGTATGTCCTGCAAACCCTCGTTCGATGAAGAGGGGCGATTCTATTGTCCTTATTGTTCATATAAAAGAGCTTTGGTTATTGTGAATGAGCTAAGGAGAAAGGCTATGGCGGCAAAGAGGAAGTTATCTGATTTCATTGATAACAGGATGGTTAGTGGTGCCAATTCACCGCAGTTAGGAGAGGCAGGTAAGAAGAAAATAACTGATGTATCAACTTGTGGAGTAGATGTGGATCTGCCTAATCACGAGAGTTCGCGAGATCAGGAGGATATCCAGGTTGGGCAAAATCAAAGTAATCAAAGGGAGGACCATGCGAGAACAGCAGGAGATGTTCCACTATCGACGATGATGGGGGTTAACAGCAAAAATCATGAGGGTCCTAGCGTGTCTAGTGTTAGCAACGGCATACATTCTACTCATGAAGTTCAGCCATGTGAGGATGCTATGAATGAAGATGGAACTCATCAGGATGGAAGTTTAGAAGATAAAGAAGATGGGAAAACGATGGAAGAAGAAAACTTAAGGTTCACAGATGACATTGAGGACAAAGAGATCGTGAAGGATCAAGGTCAACCCGAGATTCAGAATGATGAGGAAGAGATTGCTGTAGATGACGTTGATCTTGGGGCAGGACAAGCATCTCAAGACACAGGTGATGGTGCAGAACGAATCCAGCCTGAAAATATCCATCCTGCATCTGGAAATAATGATTTGAAGAATGAAACGTTCGTGAAGAAAAAGCGCTTCAAAATGAAAGCTAATAGGAAAGTAGACCGGAAGGATTTTAATTCTCCTAGAATGTCATTGCGTCGACAAACTCCAGATCATGGGACAAAGTCACCTCATATGCAAACTCCAAAACGGGAGAAAACATCTCCTCATATACAAACACCAAAGTCTGGGAAAGATCGATCAACCAAAGTCGAGAAAGTTTCTACGTCTGGAAAGTTAAAGATGAAACCATCGTCGCCTAATCAATTCAAAAACTTGATGTTTCACGGTGAGAAGCGTAAGAGAATGCGATGGTCTACCGAAGAGGAGGACATGTTGAAGGAAGGAGTTCAGAGATTCTCTTCTTCAGTAAACAAAAATCTTCCGTGGAGGAAAATTTTGGAATTCGGTCGTCATATATTTGATGACACTCGTACTCCAGTTGACCTGAAAGATAAATGGAGAAATATTGTGGACAAGTAG

Protein sequence

MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRDMPNAEDNTLNDGFVSGQDACNAEDNALNEASRKETHDVLDKEDCFQKDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEEGRFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKITDVSTCGVDVDLPNHESSRDQEDIQVGQNQSNQREDHARTAGDVPLSTMMGVNSKNHEGPSVSSVSNGIHSTHEVQPCEDAMNEDGTHQDGSLEDKEDGKTMEEENLRFTDDIEDKEIVKDQGQPEIQNDEEEIAVDDVDLGAGQASQDTGDGAERIQPENIHPASGNNDLKNETFVKKKRFKMKANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKREKTSPHIQTPKSGKDRSTKVEKVSTSGKLKMKPSSPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILEFGRHIFDDTRTPVDLKDKWRNIVDK

Homology

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BLAST of Carg18082 vs. NCBI nr
Match: KAG6589094.1 (hypothetical protein SDJN03_17659, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022801.1 hypothetical protein SDJN02_16537 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 995.3 bits (2572), Expect = 1.9e-286
Identity = 505/505 (100.00%), Postives = 505/505 (100.00%), Query Frame = 0


Query: 1   MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRDMPNAEDNTLNDGFVSGQDACNAEDNA 60
           MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRDMPNAEDNTLNDGFVSGQDACNAEDNA
Sbjct: 1   MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRDMPNAEDNTLNDGFVSGQDACNAEDNA 60

Query: 61  LNEASRKETHDVLDKEDCFQKDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEEG 120
           LNEASRKETHDVLDKEDCFQKDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEEG
Sbjct: 61  LNEASRKETHDVLDKEDCFQKDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEEG 120

Query: 121 RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKITDVST 180
           RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKITDVST
Sbjct: 121 RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKITDVST 180

Query: 181 CGVDVDLPNHESSRDQEDIQVGQNQSNQREDHARTAGDVPLSTMMGVNSKNHEGPSVSSV 240
           CGVDVDLPNHESSRDQEDIQVGQNQSNQREDHARTAGDVPLSTMMGVNSKNHEGPSVSSV
Sbjct: 181 CGVDVDLPNHESSRDQEDIQVGQNQSNQREDHARTAGDVPLSTMMGVNSKNHEGPSVSSV 240

Query: 241 SNGIHSTHEVQPCEDAMNEDGTHQDGSLEDKEDGKTMEEENLRFTDDIEDKEIVKDQGQP 300
           SNGIHSTHEVQPCEDAMNEDGTHQDGSLEDKEDGKTMEEENLRFTDDIEDKEIVKDQGQP
Sbjct: 241 SNGIHSTHEVQPCEDAMNEDGTHQDGSLEDKEDGKTMEEENLRFTDDIEDKEIVKDQGQP 300

Query: 301 EIQNDEEEIAVDDVDLGAGQASQDTGDGAERIQPENIHPASGNNDLKNETFVKKKRFKMK 360
           EIQNDEEEIAVDDVDLGAGQASQDTGDGAERIQPENIHPASGNNDLKNETFVKKKRFKMK
Sbjct: 301 EIQNDEEEIAVDDVDLGAGQASQDTGDGAERIQPENIHPASGNNDLKNETFVKKKRFKMK 360

Query: 361 ANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKREKTSPHIQTPKSGKDRSTKVEKVS 420
           ANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKREKTSPHIQTPKSGKDRSTKVEKVS
Sbjct: 361 ANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKREKTSPHIQTPKSGKDRSTKVEKVS 420

Query: 421 TSGKLKMKPSSPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE 480
           TSGKLKMKPSSPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE
Sbjct: 421 TSGKLKMKPSSPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE 480

Query: 481 FGRHIFDDTRTPVDLKDKWRNIVDK 506
           FGRHIFDDTRTPVDLKDKWRNIVDK
Sbjct: 481 FGRHIFDDTRTPVDLKDKWRNIVDK 505

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BLAST of Carg18082 vs. NCBI nr
Match: XP_022928510.1 (uncharacterized protein LOC111435297 [Cucurbita moschata])

HSP 1 Score: 973.8 bits (2516), Expect = 5.8e-280
Identity = 494/505 (97.82%), Postives = 501/505 (99.21%), Query Frame = 0


Query: 1   MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRDMPNAEDNTLNDGFVSGQDACNAEDNA 60
           MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDR+MPNAEDNTLNDGFVSGQDACNAEDNA
Sbjct: 1   MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRNMPNAEDNTLNDGFVSGQDACNAEDNA 60

Query: 61  LNEASRKETHDVLDKEDCFQKDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEEG 120
           LNEASRKETHDVLDKEDCFQKDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEEG
Sbjct: 61  LNEASRKETHDVLDKEDCFQKDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEEG 120

Query: 121 RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKITDVST 180
           RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKK+TDVST
Sbjct: 121 RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKVTDVST 180

Query: 181 CGVDVDLPNHESSRDQEDIQVGQNQSNQREDHARTAGDVPLSTMMGVNSKNHEGPSVSSV 240
           CGVDVDLPNHESSRDQED+QVGQNQSNQ EDHARTAGDV LST+MGVNSKNHEGPSVSSV
Sbjct: 181 CGVDVDLPNHESSRDQEDMQVGQNQSNQGEDHARTAGDVQLSTVMGVNSKNHEGPSVSSV 240

Query: 241 SNGIHSTHEVQPCEDAMNEDGTHQDGSLEDKEDGKTMEEENLRFTDDIEDKEIVKDQGQP 300
           SNGIHSTHEVQPCEDAMNEDGTHQD SLEDKEDGKTMEEENLRFTDDIEDKEIVKDQGQP
Sbjct: 241 SNGIHSTHEVQPCEDAMNEDGTHQDESLEDKEDGKTMEEENLRFTDDIEDKEIVKDQGQP 300

Query: 301 EIQNDEEEIAVDDVDLGAGQASQDTGDGAERIQPENIHPASGNNDLKNETFVKKKRFKMK 360
           EIQNDEEEIAV+DVDLGAG+ASQDTGDGAERIQPENI+PASGNNDLKNETFVKKKRFKMK
Sbjct: 301 EIQNDEEEIAVNDVDLGAGRASQDTGDGAERIQPENIYPASGNNDLKNETFVKKKRFKMK 360

Query: 361 ANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKREKTSPHIQTPKSGKDRSTKVEKVS 420
           ANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKREKTSPHIQTPK GKDRSTKVEKVS
Sbjct: 361 ANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKREKTSPHIQTPKPGKDRSTKVEKVS 420

Query: 421 TSGKLKMKPSSPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE 480
           TSGKLKMKPSSPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE
Sbjct: 421 TSGKLKMKPSSPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE 480

Query: 481 FGRHIFDDTRTPVDLKDKWRNIVDK 506
           FGRHIFDDTRTPVDLKDKWRNIVDK
Sbjct: 481 FGRHIFDDTRTPVDLKDKWRNIVDK 505

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BLAST of Carg18082 vs. NCBI nr
Match: XP_022989389.1 (uncharacterized protein LOC111486458 [Cucurbita maxima])

HSP 1 Score: 960.7 bits (2482), Expect = 5.1e-276
Identity = 485/505 (96.04%), Postives = 497/505 (98.42%), Query Frame = 0


Query: 1   MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRDMPNAEDNTLNDGFVSGQDACNAEDNA 60
           MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRDMPNAEDNTLNDGFVSGQDACNAEDNA
Sbjct: 1   MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRDMPNAEDNTLNDGFVSGQDACNAEDNA 60

Query: 61  LNEASRKETHDVLDKEDCFQKDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEEG 120
           LNEASRKETHDV DKEDCFQKDTCIRCDE GGLLVCTEIGCPIALHEYCMSCKPSFDEEG
Sbjct: 61  LNEASRKETHDVSDKEDCFQKDTCIRCDESGGLLVCTEIGCPIALHEYCMSCKPSFDEEG 120

Query: 121 RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKITDVST 180
           RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKK+TDVST
Sbjct: 121 RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKVTDVST 180

Query: 181 CGVDVDLPNHESSRDQEDIQVGQNQSNQREDHARTAGDVPLSTMMGVNSKNHEGPSVSSV 240
           CGVDVDLPNHES RDQED+QVGQNQSNQ EDHARTAGDV LST+MGVNSKNHEGPSVS V
Sbjct: 181 CGVDVDLPNHESLRDQEDMQVGQNQSNQGEDHARTAGDVQLSTVMGVNSKNHEGPSVSCV 240

Query: 241 SNGIHSTHEVQPCEDAMNEDGTHQDGSLEDKEDGKTMEEENLRFTDDIEDKEIVKDQGQP 300
           SNGIHSTHEVQPCEDAMNE+GTHQD SLEDKEDGKTMEE+NLRFTDDIEDKEIVK+QG+P
Sbjct: 241 SNGIHSTHEVQPCEDAMNEEGTHQDESLEDKEDGKTMEEDNLRFTDDIEDKEIVKEQGEP 300

Query: 301 EIQNDEEEIAVDDVDLGAGQASQDTGDGAERIQPENIHPASGNNDLKNETFVKKKRFKMK 360
           +IQNDEEEIAVDDVDLGAG+ASQDTGDGAE+IQPENIHPASGNNDLKNETFVKKKRFKMK
Sbjct: 301 QIQNDEEEIAVDDVDLGAGRASQDTGDGAEQIQPENIHPASGNNDLKNETFVKKKRFKMK 360

Query: 361 ANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKREKTSPHIQTPKSGKDRSTKVEKVS 420
           ANRKVDRKDFNSPRMSLRRQTPDHGTKSPH+QTPKREKTSPHIQTPK GKDRSTKVEKVS
Sbjct: 361 ANRKVDRKDFNSPRMSLRRQTPDHGTKSPHLQTPKREKTSPHIQTPKPGKDRSTKVEKVS 420

Query: 421 TSGKLKMKPSSPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE 480
           TSGKLKMKP+SPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE
Sbjct: 421 TSGKLKMKPASPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE 480

Query: 481 FGRHIFDDTRTPVDLKDKWRNIVDK 506
           FGRHIFDDTRTPVDLKDKWRNIVDK
Sbjct: 481 FGRHIFDDTRTPVDLKDKWRNIVDK 505

[Close]

BLAST of Carg18082 vs. NCBI nr
Match: XP_023529671.1 (uncharacterized protein LOC111792440 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 951.8 bits (2459), Expect = 2.3e-273
Identity = 482/505 (95.45%), Postives = 493/505 (97.62%), Query Frame = 0


Query: 1   MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRDMPNAEDNTLNDGFVSGQDACNAEDNA 60
           MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRDMPNAED TLND FVSGQDACNAEDNA
Sbjct: 1   MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRDMPNAEDKTLNDEFVSGQDACNAEDNA 60

Query: 61  LNEASRKETHDVLDKEDCFQKDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEEG 120
           LNEASRKETHDV DKEDCFQKD CIRCDE GGLLVCTEIGCPIALHEYCMSCKPSFDEEG
Sbjct: 61  LNEASRKETHDVSDKEDCFQKDICIRCDESGGLLVCTEIGCPIALHEYCMSCKPSFDEEG 120

Query: 121 RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKITDVST 180
           RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKK+T+VST
Sbjct: 121 RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKVTEVST 180

Query: 181 CGVDVDLPNHESSRDQEDIQVGQNQSNQREDHARTAGDVPLSTMMGVNSKNHEGPSVSSV 240
           CGVDVDLPNHESSRDQED+QVGQN+SNQ EDHARTAGDV LST+MGVNSKNHEGPSVSSV
Sbjct: 181 CGVDVDLPNHESSRDQEDMQVGQNRSNQGEDHARTAGDVQLSTVMGVNSKNHEGPSVSSV 240

Query: 241 SNGIHSTHEVQPCEDAMNEDGTHQDGSLEDKEDGKTMEEENLRFTDDIEDKEIVKDQGQP 300
           SNGIHSTHEVQPCEDAMNE+GTHQD SLEDKEDGKTMEEEN RFTDDIEDKEIVKDQGQP
Sbjct: 241 SNGIHSTHEVQPCEDAMNEEGTHQDESLEDKEDGKTMEEENFRFTDDIEDKEIVKDQGQP 300

Query: 301 EIQNDEEEIAVDDVDLGAGQASQDTGDGAERIQPENIHPASGNNDLKNETFVKKKRFKMK 360
           +I NDEEE AVDDVDLGAG+ASQDTGDGAE+IQPENIHPASGNNDLKNETFVKKKRFKMK
Sbjct: 301 KIPNDEEETAVDDVDLGAGRASQDTGDGAEQIQPENIHPASGNNDLKNETFVKKKRFKMK 360

Query: 361 ANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKREKTSPHIQTPKSGKDRSTKVEKVS 420
           ANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKREKTSPHIQTPK GKDRSTKVEKVS
Sbjct: 361 ANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKREKTSPHIQTPKPGKDRSTKVEKVS 420

Query: 421 TSGKLKMKPSSPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE 480
           TSGKLK+KP+SPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE
Sbjct: 421 TSGKLKLKPASPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE 480

Query: 481 FGRHIFDDTRTPVDLKDKWRNIVDK 506
           FGRHIFDDTRTPVDLKDKWRNIVDK
Sbjct: 481 FGRHIFDDTRTPVDLKDKWRNIVDK 505

[Close]

BLAST of Carg18082 vs. NCBI nr
Match: XP_038888454.1 (uncharacterized protein LOC120078293 [Benincasa hispida] >XP_038888455.1 uncharacterized protein LOC120078293 [Benincasa hispida])

HSP 1 Score: 601.3 bits (1549), Expect = 7.8e-168
Identity = 340/539 (63.08%), Postives = 392/539 (72.73%), Query Frame = 0


Query: 1   MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRDMPNAEDNTLNDGFVSGQDACNAEDNA 60
           M+ K+RRGGRS+ SRRS+ S PS MASP +PD+D+PNAEDNT                  
Sbjct: 1   MKIKNRRGGRSKASRRSAASTPSPMASPPLPDQDVPNAEDNT------------------ 60

Query: 61  LNEASRKETHDVLDKEDCFQKDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEEG 120
           ++EAS KET+DVLDK DCFQKDTC RCD+ G LLVCTEIGCPIALH+ CMSC+PSFDE+G
Sbjct: 61  VHEASSKETNDVLDKIDCFQKDTCTRCDQSGDLLVCTEIGCPIALHKICMSCEPSFDEDG 120

Query: 121 RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKITDVST 180
           RFYCPYCSYKRALV VNELRRK M AKR LSDFID RMV G  SPQ+ E GKKK  DVST
Sbjct: 121 RFYCPYCSYKRALVRVNELRRKTMVAKRALSDFIDTRMVGGGKSPQIEETGKKKANDVST 180

Query: 181 CGVDVDLPNH------ESSRDQEDIQVGQNQSNQREDHARTAGDVPLSTMMGVNSKNHEG 240
           CGVDV+LPNH      ESSRDQ D+QV QNQ N+ EDHART GD+  ++M+GVNS+NH+G
Sbjct: 181 CGVDVELPNHGSHLGNESSRDQ-DLQVEQNQGNEGEDHARTEGDIQPTSMVGVNSENHDG 240

Query: 241 PSVSSVSNGIHSTHEVQPCEDAMNED-------GTHQDGSLEDKEDGKTMEEENLRFTDD 300
           P V +VS+  HST  +QPCED+MNE+       GTHQ  SLEDKEDG+TM++ENLR TDD
Sbjct: 241 PIVFNVSSSSHSTPVLQPCEDSMNEETHEVDTSGTHQVESLEDKEDGETMDKENLRSTDD 300

Query: 301 IEDKEIVKDQGQ---PEIQNDEEEIAVDDVDLGAGQASQDTGDGAERIQPEN------IH 360
           I+D  I KDQGQ   P   +DEEE A         +  QD  DG E+ QP+N      I 
Sbjct: 301 IQDDGIAKDQGQLETPSAHHDEEETA---------REPQDKDDGGEQTQPDNERMLEDIV 360

Query: 361 PASGNNDLKNETFVKKKRFKMKANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKREK 420
            ASGNNDLK+ET VKK+RFK KANR+ D+++ N PR SLR QTPD G KSPH+QTP   K
Sbjct: 361 LASGNNDLKSETIVKKRRFKTKANRRKDQQNVNYPRKSLRLQTPD-GMKSPHLQTPDPGK 420

Query: 421 TSPHIQTPKSGK------------DRSTKVEKVSTSGKLKMKPSSPNQFKNLMFHGEKRK 480
            SPHIQTP+  K            D +TK EKV  S  LK +P+S NQFKNL FHG KRK
Sbjct: 421 KSPHIQTPEPRKMSPRIQTPRPQIDHATKTEKVPVSRSLKPQPASQNQFKNLDFHGGKRK 480

Query: 481 RMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILEFGRHIFDDTRTPVDLKDKWRNIVDK 506
           RM WS EEE+MLKEGVQ+FSS+ NKNLPWRKILEFGRHIFD TRTPVDLKDKWRN+  K
Sbjct: 481 RMLWSVEEEEMLKEGVQKFSSTANKNLPWRKILEFGRHIFDSTRTPVDLKDKWRNLQAK 510

[Close]

BLAST of Carg18082 vs. ExPASy TrEMBL
Match: A0A6J1ERV5 (uncharacterized protein LOC111435297 OS=Cucurbita moschata OX=3662 GN=LOC111435297 PE=4 SV=1)

HSP 1 Score: 973.8 bits (2516), Expect = 2.8e-280
Identity = 494/505 (97.82%), Postives = 501/505 (99.21%), Query Frame = 0


Query: 1   MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRDMPNAEDNTLNDGFVSGQDACNAEDNA 60
           MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDR+MPNAEDNTLNDGFVSGQDACNAEDNA
Sbjct: 1   MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRNMPNAEDNTLNDGFVSGQDACNAEDNA 60

Query: 61  LNEASRKETHDVLDKEDCFQKDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEEG 120
           LNEASRKETHDVLDKEDCFQKDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEEG
Sbjct: 61  LNEASRKETHDVLDKEDCFQKDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEEG 120

Query: 121 RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKITDVST 180
           RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKK+TDVST
Sbjct: 121 RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKVTDVST 180

Query: 181 CGVDVDLPNHESSRDQEDIQVGQNQSNQREDHARTAGDVPLSTMMGVNSKNHEGPSVSSV 240
           CGVDVDLPNHESSRDQED+QVGQNQSNQ EDHARTAGDV LST+MGVNSKNHEGPSVSSV
Sbjct: 181 CGVDVDLPNHESSRDQEDMQVGQNQSNQGEDHARTAGDVQLSTVMGVNSKNHEGPSVSSV 240

Query: 241 SNGIHSTHEVQPCEDAMNEDGTHQDGSLEDKEDGKTMEEENLRFTDDIEDKEIVKDQGQP 300
           SNGIHSTHEVQPCEDAMNEDGTHQD SLEDKEDGKTMEEENLRFTDDIEDKEIVKDQGQP
Sbjct: 241 SNGIHSTHEVQPCEDAMNEDGTHQDESLEDKEDGKTMEEENLRFTDDIEDKEIVKDQGQP 300

Query: 301 EIQNDEEEIAVDDVDLGAGQASQDTGDGAERIQPENIHPASGNNDLKNETFVKKKRFKMK 360
           EIQNDEEEIAV+DVDLGAG+ASQDTGDGAERIQPENI+PASGNNDLKNETFVKKKRFKMK
Sbjct: 301 EIQNDEEEIAVNDVDLGAGRASQDTGDGAERIQPENIYPASGNNDLKNETFVKKKRFKMK 360

Query: 361 ANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKREKTSPHIQTPKSGKDRSTKVEKVS 420
           ANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKREKTSPHIQTPK GKDRSTKVEKVS
Sbjct: 361 ANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKREKTSPHIQTPKPGKDRSTKVEKVS 420

Query: 421 TSGKLKMKPSSPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE 480
           TSGKLKMKPSSPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE
Sbjct: 421 TSGKLKMKPSSPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE 480

Query: 481 FGRHIFDDTRTPVDLKDKWRNIVDK 506
           FGRHIFDDTRTPVDLKDKWRNIVDK
Sbjct: 481 FGRHIFDDTRTPVDLKDKWRNIVDK 505

[Close]

BLAST of Carg18082 vs. ExPASy TrEMBL
Match: A0A6J1JP70 (uncharacterized protein LOC111486458 OS=Cucurbita maxima OX=3661 GN=LOC111486458 PE=4 SV=1)

HSP 1 Score: 960.7 bits (2482), Expect = 2.4e-276
Identity = 485/505 (96.04%), Postives = 497/505 (98.42%), Query Frame = 0


Query: 1   MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRDMPNAEDNTLNDGFVSGQDACNAEDNA 60
           MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRDMPNAEDNTLNDGFVSGQDACNAEDNA
Sbjct: 1   MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRDMPNAEDNTLNDGFVSGQDACNAEDNA 60

Query: 61  LNEASRKETHDVLDKEDCFQKDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEEG 120
           LNEASRKETHDV DKEDCFQKDTCIRCDE GGLLVCTEIGCPIALHEYCMSCKPSFDEEG
Sbjct: 61  LNEASRKETHDVSDKEDCFQKDTCIRCDESGGLLVCTEIGCPIALHEYCMSCKPSFDEEG 120

Query: 121 RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKITDVST 180
           RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKK+TDVST
Sbjct: 121 RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKVTDVST 180

Query: 181 CGVDVDLPNHESSRDQEDIQVGQNQSNQREDHARTAGDVPLSTMMGVNSKNHEGPSVSSV 240
           CGVDVDLPNHES RDQED+QVGQNQSNQ EDHARTAGDV LST+MGVNSKNHEGPSVS V
Sbjct: 181 CGVDVDLPNHESLRDQEDMQVGQNQSNQGEDHARTAGDVQLSTVMGVNSKNHEGPSVSCV 240

Query: 241 SNGIHSTHEVQPCEDAMNEDGTHQDGSLEDKEDGKTMEEENLRFTDDIEDKEIVKDQGQP 300
           SNGIHSTHEVQPCEDAMNE+GTHQD SLEDKEDGKTMEE+NLRFTDDIEDKEIVK+QG+P
Sbjct: 241 SNGIHSTHEVQPCEDAMNEEGTHQDESLEDKEDGKTMEEDNLRFTDDIEDKEIVKEQGEP 300

Query: 301 EIQNDEEEIAVDDVDLGAGQASQDTGDGAERIQPENIHPASGNNDLKNETFVKKKRFKMK 360
           +IQNDEEEIAVDDVDLGAG+ASQDTGDGAE+IQPENIHPASGNNDLKNETFVKKKRFKMK
Sbjct: 301 QIQNDEEEIAVDDVDLGAGRASQDTGDGAEQIQPENIHPASGNNDLKNETFVKKKRFKMK 360

Query: 361 ANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKREKTSPHIQTPKSGKDRSTKVEKVS 420
           ANRKVDRKDFNSPRMSLRRQTPDHGTKSPH+QTPKREKTSPHIQTPK GKDRSTKVEKVS
Sbjct: 361 ANRKVDRKDFNSPRMSLRRQTPDHGTKSPHLQTPKREKTSPHIQTPKPGKDRSTKVEKVS 420

Query: 421 TSGKLKMKPSSPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE 480
           TSGKLKMKP+SPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE
Sbjct: 421 TSGKLKMKPASPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILE 480

Query: 481 FGRHIFDDTRTPVDLKDKWRNIVDK 506
           FGRHIFDDTRTPVDLKDKWRNIVDK
Sbjct: 481 FGRHIFDDTRTPVDLKDKWRNIVDK 505

[Close]

BLAST of Carg18082 vs. ExPASy TrEMBL
Match: A0A1S3CHE7 (protein CHROMATIN REMODELING 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500488 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 3.1e-162
Identity = 333/528 (63.07%), Postives = 386/528 (73.11%), Query Frame = 0


Query: 1   MRTKSRRGGRSRPSRRSSDS-YPSFMASPSVPDRDMPNAEDNTLNDGFVSGQDACNAEDN 60
           MR K+RRGGR +PSR S+ S  PS MASP +PD+D+P                  N EDN
Sbjct: 1   MRIKNRRGGRCKPSRPSATSTTPSPMASPPLPDQDVP------------------NVEDN 60

Query: 61  ALNEASRKETHDVLDKEDCFQKDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEE 120
           AL EAS KET+DVLDK DCFQKD+C RCD+ G LLVCTE GCPIALHE CMSC+PSFDE+
Sbjct: 61  ALQEASNKETNDVLDKIDCFQKDSCTRCDQSGDLLVCTEPGCPIALHELCMSCEPSFDED 120

Query: 121 GRFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKITDVS 180
           GRFYCPYCSYKRAL+ VNELRRK M AKR LSDFID RMV G NSP++GEAGKKK  D+S
Sbjct: 121 GRFYCPYCSYKRALIRVNELRRKTMVAKRALSDFIDTRMVGGGNSPRMGEAGKKKSDDIS 180

Query: 181 TCGVDVDLPNH------ESSRDQEDIQVGQNQSNQREDHARTAGDVPLSTMMGVNSKNHE 240
           TCGVDVDLPN+      ESSRDQ DIQV QNQSN+ E+ AR  GDV  ++M+GVNS+ H+
Sbjct: 181 TCGVDVDLPNYGSHLCNESSRDQ-DIQVEQNQSNEGENFARAEGDVQPTSMVGVNSEIHD 240

Query: 241 GPSVSSVSNGIHSTHEVQPCEDAMNED-------GTHQDGSLEDKEDGKTMEEENLRFTD 300
           GP VS+VSN  HS   VQPCED M+E+       GTHQ  SLEDK+DGKTM+EE LR  D
Sbjct: 241 GPIVSNVSNDSHSAPVVQPCEDKMDEETHEAETSGTHQVESLEDKDDGKTMDEEILRPID 300

Query: 301 DIEDKEIVKDQGQPEI---QNDEEEIAVDDVDLGAGQASQDTGDGAERIQP------ENI 360
           DI+D  I +DQGQ EI    +D EE A         Q  QD  DG E+IQP      ENI
Sbjct: 301 DIQDDRIAEDQGQLEIPGAYHDGEETA---------QEPQDKDDGREQIQPDNERMLENI 360

Query: 361 HPASGNNDLKNETFVKKKRFKMKANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKRE 420
            PAS +NDLKNET  KK+RFK KANR+ D ++ NSPR SLR QTP+   KSP ++TP+  
Sbjct: 361 IPASVDNDLKNETTAKKRRFKTKANRRTDLQNVNSPRKSLRLQTPE-VKKSPRIRTPEPR 420

Query: 421 KTSPHIQTPKSGKDRSTKVEKVSTSGKLKMKPSSPNQFKNLMFHGEKRKRMRWSTEEEDM 480
             SPHIQTPK  KD + K+EKVS S  LK + +S N FK+L FHG KRKRMRWS EEE+M
Sbjct: 421 NNSPHIQTPKPQKDHAIKIEKVSVSRNLKPQSASHNHFKSLDFHGGKRKRMRWSVEEEEM 480

Query: 481 LKEGVQRFSSSVNKNLPWRKILEFGRHIFDDTRTPVDLKDKWRNIVDK 506
           L+EGVQ+FSS+ NKNLPWRKILEFGRHIFDDTRTPVDLKDKWRN++ +
Sbjct: 481 LREGVQKFSSTANKNLPWRKILEFGRHIFDDTRTPVDLKDKWRNLLGR 499

[Close]

BLAST of Carg18082 vs. ExPASy TrEMBL
Match: A0A0A0K518 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G030500 PE=4 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 6.4e-160
Identity = 328/535 (61.31%), Postives = 376/535 (70.28%), Query Frame = 0


Query: 1   MRTKSRRGGRSRPSRRSSDSYPSFMASPSVPDRDMPNAEDNTLNDGFVSGQDACNAEDNA 60
           MR K+RRGGR +PSRRS  S PS MAS  +PD+D+PN EDNTL+D               
Sbjct: 1   MRIKTRRGGRCKPSRRSVTSTPSPMASSPLPDQDVPNVEDNTLHD--------------- 60

Query: 61  LNEASRKETHDVLDKEDCFQKDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEEG 120
              AS KET DVLDK DCFQKDTC RCDE G LLVCTE GCPIALHE CMSC+PSFDE+G
Sbjct: 61  ---ASNKETDDVLDKIDCFQKDTCTRCDESGDLLVCTEPGCPIALHELCMSCEPSFDEDG 120

Query: 121 RFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKITDVST 180
           RFYCPYCSYKRAL+ VNELRRK M AKR LSDFID RMV G NSP++GEAGKKK  DVST
Sbjct: 121 RFYCPYCSYKRALIRVNELRRKTMVAKRALSDFIDTRMVGGDNSPRMGEAGKKKSDDVST 180

Query: 181 CGVDVDLPNH------ESSRDQEDIQVGQNQSNQREDHARTAGDVPLSTMMGVNSKNHEG 240
           CG DV+LPNH      ESSRD  DIQV QNQSN+ ED AR  GDV  ++M+GVNS+ H+G
Sbjct: 181 CGGDVNLPNHGSHLCNESSRD-HDIQVEQNQSNEGEDRARAGGDVEPTSMVGVNSEIHDG 240

Query: 241 PSVSSVSNGIHSTHEVQPCEDAMNED-------GTHQDGSLEDKEDGKTMEEENLRFTDD 300
           P VS+VSN  HS   VQPCED M+E+       GTHQ  SLEDKEDG TM++E LR  DD
Sbjct: 241 PIVSNVSNSSHSAPTVQPCEDRMDEETHEAETSGTHQVESLEDKEDGITMDKEILRPIDD 300

Query: 301 IEDKEIVKDQGQPEIQNDEEEIAVDDVDLGAGQASQDTGDGAERIQP------ENIHPAS 360
           I+D  I  D GQ E                  Q  Q+   G E+IQP      ENI PAS
Sbjct: 301 IQDDRIAMDHGQLETP------GAYHYGEATAQELQEKDGGREQIQPDNEKMLENIVPAS 360

Query: 361 GNNDLKNETFVKKKRFKMKANRKVDRKDFNSPRMSLRRQTPDH-----------GTKSPH 420
           GNNDLKN+T VKK+RFK KANR+ D ++ NSPR SLR QTP+              KSPH
Sbjct: 361 GNNDLKNKTTVKKRRFKTKANRRTDLQNVNSPRKSLRLQTPEEKKSPRIRTPEPRRKSPH 420

Query: 421 MQTPKREKTSPHIQTPKSGKDRSTKVEKVSTSGKLKMKPSSPNQFKNLMFHGEKRKRMRW 480
           +QTP+  K SP +QTPK  KD + K+EKVS S  LK +P+S NQ K+L FH  KRKRMRW
Sbjct: 421 IQTPEPRKNSPRLQTPKPQKDNTIKIEKVSVSRNLKPQPASHNQLKSLDFHSGKRKRMRW 480

Query: 481 STEEEDMLKEGVQRFSSSVNKNLPWRKILEFGRHIFDDTRTPVDLKDKWRNIVDK 506
           S EEE+MLKEGV++FSS+ NKNLPWRKILEFGRHIFDDTRTPVDLKDKWR+++ +
Sbjct: 481 SVEEEEMLKEGVRKFSSTTNKNLPWRKILEFGRHIFDDTRTPVDLKDKWRSLLGR 510

[Close]

BLAST of Carg18082 vs. ExPASy TrEMBL
Match: A0A6J1C1V0 (uncharacterized protein LOC111007617 OS=Momordica charantia OX=3673 GN=LOC111007617 PE=4 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 3.2e-159
Identity = 326/528 (61.74%), Postives = 380/528 (71.97%), Query Frame = 0


Query: 1   MRTKSRRGGRSRPSRRSS-DSYPSFMASPSVPDRDMPNAEDNTLNDGFVSGQDACNAEDN 60
           MRTK+RRGGRS+PSRRSS  S PS  ASPSV DRD P                  NAEDN
Sbjct: 1   MRTKNRRGGRSKPSRRSSAASTPSSTASPSVTDRDAP------------------NAEDN 60

Query: 61  ALNEASRKETHDVLDKEDCFQKDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEE 120
            LNEAS  ET DV ++ DCF+KDTCIRCDE GGLLVCTEIGCPIALHEYCMSC+P+FDEE
Sbjct: 61  ILNEASANETQDVSNEVDCFRKDTCIRCDESGGLLVCTEIGCPIALHEYCMSCEPTFDEE 120

Query: 121 GRFYCPYCSYKRALVIVNELRRKAMAAKRKLSDFIDNRMVSGANSPQLGEAGKKKITDVS 180
           GRFYCPYCSYK+ALV  NELRRKAM AK+ LSDFID RMVSG NSPQ+GEA KKK    S
Sbjct: 121 GRFYCPYCSYKKALVRANELRRKAMVAKKALSDFIDTRMVSGGNSPQIGEAAKKK---AS 180

Query: 181 TCGVDVDLPNHES-----SRDQEDIQVGQNQSNQREDHARTAGDVPLSTMMGVNSKNHEG 240
           TCGVDV+LP+HES     S   + +QV +NQSN+ EDH +TAGD    + +GVN++NH+ 
Sbjct: 181 TCGVDVNLPDHESHLGSESLGDQAVQVERNQSNEGEDHEKTAGDA--RSTVGVNAENHDN 240

Query: 241 PSVSSVSNGIHSTHEVQPCEDAMNED--------GTHQDGSLEDKEDGKTMEEENLRFTD 300
           P VS+VSN I+ST E+QP ED+MNE+        GTH   SLEDK+DGK MEEE LR TD
Sbjct: 241 PIVSNVSNSINSTPEIQPLEDSMNEEETREADASGTHLVESLEDKDDGKMMEEETLRLTD 300

Query: 301 DIEDKEIVKDQGQPE---IQNDEEEIAVDDVDLGAGQASQDTGDGAERIQ------PENI 360
           DI+++ IVKD+GQPE     NDEEE AVD VD G  +  QD GDG E+IQ       ENI
Sbjct: 301 DIQNEGIVKDRGQPETSNAHNDEEETAVDVVDHGVEREPQDNGDGGEQIQLDKEGMLENI 360

Query: 361 HPASGNNDLKNETFVKKKRFKMKANRKVDRKDFNSPRMSLRRQTPDHGTKSPHMQTPKRE 420
           +  SGN DLKNET VKKKRFK KANR++D ++F+SPR S R                   
Sbjct: 361 NVGSGNGDLKNETIVKKKRFKTKANRRIDLQNFSSPRKSTR------------------- 420

Query: 421 KTSPHIQTPKSGKDRSTKVEKVSTSGKLKMKPSSPNQFKNLMFHGEKRKRMRWSTEEEDM 480
                I+TP+ GK+  TK+EKVS    LK++P SPNQFK L  +G KRKR+ WSTEEE+M
Sbjct: 421 -----IRTPEPGKNHVTKIEKVSVPRNLKLQPVSPNQFKKLDSNGGKRKRLFWSTEEEEM 480

Query: 481 LKEGVQRFSSSVNKNLPWRKILEFGRHIFDDTRTPVDLKDKWRNIVDK 506
           LKEGVQ+FS++ NKNLPWRKILEFGRH+FDDTRTPVDLKDKWRNI+ K
Sbjct: 481 LKEGVQKFSTTANKNLPWRKILEFGRHVFDDTRTPVDLKDKWRNIIAK 481

[Close]

BLAST of Carg18082 vs. TAIR 10
Match: AT1G01150.1 (Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain )

HSP 1 Score: 82.0 bits (201), Expect = 1.5e-15
Identity = 34/60 (56.67%), Postives = 47/60 (78.33%), Query Frame = 0


Query: 443 EKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILEFGRHIFDDTRTPVDLKDKWRNI 502
           ++ KR+ W+  EE ML+EGV++FS ++NKN+PW+KILE G+ IF  TR   DLKDKWRN+
Sbjct: 230 DQPKRVLWTVNEEKMLREGVEKFSDTINKNMPWKKILEMGKGIFHTTRNSSDLKDKWRNM 289

[Close]

BLAST of Carg18082 vs. TAIR 10
Match: AT4G12670.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 1.2e-12
Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 444 KRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILEFGRHIFDDTRTPVDLKDKWRNI 503
           KRKR  W+  E +ML+ GVQ+F     +N+PWRKIL+FGR +F D R P DLKDKW+ +
Sbjct: 414 KRKRRFWTLAEVEMLRVGVQKFPG--ERNIPWRKILQFGRDVFHDERAPSDLKDKWKTL 470

[Close]

BLAST of Carg18082 vs. TAIR 10
Match: AT5G03780.1 (TRF-like 10 )

HSP 1 Score: 70.5 bits (171), Expect = 4.4e-12
Identity = 68/259 (26.25%), Postives = 125/259 (48.26%), Query Frame = 0


Query: 265 DGSLEDKEDGKTMEEENL----RFTDDIEDKEIVKDQGQPEIQNDEEEIAVDDVDLGAGQ 324
           D  ++ +++  T+  + +    + TD + D E+   QG+ +  + + +   D   +G G+
Sbjct: 154 DKEMKSRDEDITLSGDEIGNQEQSTDIVSDHEL---QGEKDGCSSKPD--ADQGKVGTGK 213

Query: 325 ASQDTGDGAERIQPENIHPASGNNDLKNETFVKKKRFKMKANRKVDRKDFNSPRMSLRRQ 384
              + G  +E++  E    A  +   K++     +     A +K +   F S + S   +
Sbjct: 214 VIDEVG-ASEKVATEKFQDAEDDETAKDQ---GTRILNTGAGKKREVSSFLSMQESFSAK 273

Query: 385 TPDHGTKSPHMQTPKREKTSPHIQTPKSGKDR---------STKVEKVSTSGKL------ 444
             D   ++   +    +     I +  S  +R         ++ V+  S SG++      
Sbjct: 274 EQDQVQQNEKRRRRGLKIIDSDISSKGSSNERNGEDVTEQVTSSVQVTSPSGRMRNQQAT 333

Query: 445 -KMKPSSPNQFKNLMFHGEKRKRMRWSTEEEDMLKEGVQRFSSSVNKNLPWRKILEFGRH 504
            K+   S        F  ++R+R+ W+ EEE+MLK GV++F++  NKN+PWRKILE G  
Sbjct: 334 TKVVAKSKTVRDISFFKMDQRRRLLWTYEEEEMLKVGVEKFAAEANKNMPWRKILEMGEK 393

[Close]

BLAST of Carg18082 vs. TAIR 10
Match: AT1G14770.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 7.9e-09
Identity = 24/70 (34.29%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 81  KDTCIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEEGRFYCPYCSYKRALVIVNELR 140
           ++ C +C++ G LL+C+   C   +H+ C++C  + DE G F CP C Y R  +  +E +
Sbjct: 345 ENVCWKCEKEGTLLICSRSECAAKVHKECLNCPVNVDEYGNFLCPLCWYDRLAMEYHESQ 404

Query: 141 RKAMAAKRKL 151
           +    AKR+L
Sbjct: 405 KLISCAKRRL 414

[Close]

BLAST of Carg18082 vs. TAIR 10
Match: AT1G68030.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 7.9e-09
Identity = 27/80 (33.75%), Postives = 42/80 (52.50%), Query Frame = 0


Query: 84  CIRCDEGGGLLVCTEIGCPIALHEYCMSCKPSFDEEGRFYCPYCSYKRALVIVNELRRKA 143
           C+ C E G LL C+  GC + +H+ C+   PS+ + G FYC  C+         + + + 
Sbjct: 229 CVNCKESGKLLFCSSDGCEVMVHQKCLDSPPSYHDAGDFYCSLCALTCPSAEYVQFQDEV 288

Query: 144 MAAKRKLSDFIDNRMVSGAN 164
             AKRKL  F+  R++S  N
Sbjct: 289 AKAKRKLVSFL--RLMSEVN 306

The following BLAST results are available for this feature:

BLAST of Carg18082 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589094.1	1.9e-286	100.00	hypothetical protein SDJN03_17659, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022928510.1	5.8e-280	97.82	uncharacterized protein LOC111435297 [Cucurbita moschata]	[more]
XP_022989389.1	5.1e-276	96.04	uncharacterized protein LOC111486458 [Cucurbita maxima]	[more]
XP_023529671.1	2.3e-273	95.45	uncharacterized protein LOC111792440 [Cucurbita pepo subsp. pepo]	[more]
XP_038888454.1	7.8e-168	63.08	uncharacterized protein LOC120078293 [Benincasa hispida] >XP_038888455.1 unchara...	[more]

BLAST of Carg18082 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg18082 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERV5	2.8e-280	97.82	uncharacterized protein LOC111435297 OS=Cucurbita moschata OX=3662 GN=LOC1114352...	[more]
A0A6J1JP70	2.4e-276	96.04	uncharacterized protein LOC111486458 OS=Cucurbita maxima OX=3661 GN=LOC111486458...	[more]
A0A1S3CHE7	3.1e-162	63.07	protein CHROMATIN REMODELING 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0K518	6.4e-160	61.31	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G03050...	[more]
A0A6J1C1V0	3.2e-159	61.74	uncharacterized protein LOC111007617 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]

BLAST of Carg18082 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01150.1	1.5e-15	56.67	Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain	[more]
AT4G12670.1	1.2e-12	54.24	Homeodomain-like superfamily protein	[more]
AT5G03780.1	4.4e-12	26.25	TRF-like 10	[more]
AT1G14770.1	7.9e-09	34.29	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G68030.1	7.9e-09	33.75	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 136..156
None	No IPR available	GENE3D	1.10.10.60		coord: 441..504 e-value: 2.7E-13 score: 51.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 363..422
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..436
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR47863:SF5	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN	coord: 1..505
None	No IPR available	PANTHER	PTHR47863	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 1..505
None	No IPR available	CDD	cd11660	SANT_TRF	coord: 449..503 e-value: 6.735E-13 score: 61.0439
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 83..128 e-value: 1.4E-4 score: 31.2
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 446..505 e-value: 8.3E-6 score: 35.3
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 442..503 score: 8.025576
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 447..502 e-value: 2.4E-7 score: 30.8
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 68..161 e-value: 1.3E-8 score: 36.8
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 84..127
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 77..134
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 445..504

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18082-RA	Carg18082-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding