Carg18070 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18070
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	FAS1 domain-containing protein
Location	Carg_Chr11: 11813401 .. 11813985 (-)
RNA-Seq Expression	Carg18070
Synteny	Carg18070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCTGGTTTTTTGTTCTTCTTTTCTTGGTTGGGAATGCTCGGGCGACGACTTTCAACCAAACCGACCTGCGAGCAGCCATGGATGACATGAGAATGAAATCTTACCATGGTTTTGTCATACTACTCAAGATCCTAAACAGCTCACATAAAAACTTGCTGAACTCAGATATAACGTTCTTCATGCCTGCTGATCAGGAACTTTCTCGAGCTGCTATTTCGCCTGACCGTATAGAAGAATTTGTTCTTAGTCATTCTATCCCCACGAGATTAGTGCTCAGCAATCTCTTGCACTTCCCGAACGGAAGCCTGGTTCCATCGAGCATTCCAAACAGAATGATCAGCGTAACCAACTGCAGAAAGATGGGTGTATGTATGAACAATGCACAAATTGTCACCCCAAATGTGTGCCTAAACTCAGCCATAAGATGTCATGGTATAAGCACAACTATTGCATATGACAATACTTCTTTTTCAGACATAAAGCATAGTTCAGCTGAAACAATAGTTCAGAGGAATGAGAAGAAAGGAGCGAAATCGTTACAGTATGCAGCAATGAAGAAGAACCGTCCGCTGCACTGA

mRNA sequence

ATGGCTTCCTGGTTTTTTGTTCTTCTTTTCTTGGTTGGGAATGCTCGGGCGACGACTTTCAACCAAACCGACCTGCGAGCAGCCATGGATGACATGAGAATGAAATCTTACCATGGTTTTGTCATACTACTCAAGATCCTAAACAGCTCACATAAAAACTTGCTGAACTCAGATATAACGTTCTTCATGCCTGCTGATCAGGAACTTTCTCGAGCTGCTATTTCGCCTGACCGTATAGAAGAATTTGTTCTTAGTCATTCTATCCCCACGAGATTAGTGCTCAGCAATCTCTTGCACTTCCCGAACGGAAGCCTGGTTCCATCGAGCATTCCAAACAGAATGATCAGCGTAACCAACTGCAGAAAGATGGGTGTATGTATGAACAATGCACAAATTGTCACCCCAAATGTGTGCCTAAACTCAGCCATAAGATGTCATGGTATAAGCACAACTATTGCATATGACAATACTTCTTTTTCAGACATAAAGCATAGTTCAGCTGAAACAATAGTTCAGAGGAATGAGAAGAAAGGAGCGAAATCGTTACAGTATGCAGCAATGAAGAAGAACCGTCCGCTGCACTGA

Coding sequence (CDS)

ATGGCTTCCTGGTTTTTTGTTCTTCTTTTCTTGGTTGGGAATGCTCGGGCGACGACTTTCAACCAAACCGACCTGCGAGCAGCCATGGATGACATGAGAATGAAATCTTACCATGGTTTTGTCATACTACTCAAGATCCTAAACAGCTCACATAAAAACTTGCTGAACTCAGATATAACGTTCTTCATGCCTGCTGATCAGGAACTTTCTCGAGCTGCTATTTCGCCTGACCGTATAGAAGAATTTGTTCTTAGTCATTCTATCCCCACGAGATTAGTGCTCAGCAATCTCTTGCACTTCCCGAACGGAAGCCTGGTTCCATCGAGCATTCCAAACAGAATGATCAGCGTAACCAACTGCAGAAAGATGGGTGTATGTATGAACAATGCACAAATTGTCACCCCAAATGTGTGCCTAAACTCAGCCATAAGATGTCATGGTATAAGCACAACTATTGCATATGACAATACTTCTTTTTCAGACATAAAGCATAGTTCAGCTGAAACAATAGTTCAGAGGAATGAGAAGAAAGGAGCGAAATCGTTACAGTATGCAGCAATGAAGAAGAACCGTCCGCTGCACTGA

Protein sequence

MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDITFFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNCRKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSDIKHSSAETIVQRNEKKGAKSLQYAAMKKNRPLH

Homology

[Close]

BLAST of Carg18070 vs. NCBI nr
Match: XP_022928395.1 (uncharacterized protein LOC111435225 [Cucurbita moschata] >KAG7022813.1 hypothetical protein SDJN02_16549, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 380.6 bits (976), Expect = 8.3e-102
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60
           MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT
Sbjct: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60

Query: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNC 120
           FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNC
Sbjct: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNC 120

Query: 121 RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSDIKHSSAETIVQRNEKKGAK 180
           RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSDIKHSSAETIVQRNEKKGAK
Sbjct: 121 RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSDIKHSSAETIVQRNEKKGAK 180

Query: 181 SLQYAAMKKNRPLH 195
           SLQYAAMKKNRPLH
Sbjct: 181 SLQYAAMKKNRPLH 194

[Close]

BLAST of Carg18070 vs. NCBI nr
Match: XP_023529797.1 (uncharacterized protein LOC111792513 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 377.9 bits (969), Expect = 5.4e-101
Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60
           MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT
Sbjct: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60

Query: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNC 120
           FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNC
Sbjct: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNC 120

Query: 121 RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSDIKHSSAETIVQRNEKKGAK 180
           RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSD KHSSAETIVQRNEKKGAK
Sbjct: 121 RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSDKKHSSAETIVQRNEKKGAK 180

Query: 181 SLQYAAMKKNRPLH 195
           SLQYAAMKKNRPLH
Sbjct: 181 SLQYAAMKKNRPLH 194

[Close]

BLAST of Carg18070 vs. NCBI nr
Match: XP_022989473.1 (uncharacterized protein LOC111486521 [Cucurbita maxima])

HSP 1 Score: 372.1 bits (954), Expect = 2.9e-99
Identity = 190/194 (97.94%), Postives = 192/194 (98.97%), Query Frame = 0


Query: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60
           MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT
Sbjct: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60

Query: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNC 120
           FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVL+NLLHFPNGSLVPSSIPNRMIS+TNC
Sbjct: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLNNLLHFPNGSLVPSSIPNRMISITNC 120

Query: 121 RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSDIKHSSAETIVQRNEKKGAK 180
           RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSDIK SSAETIVQRNEKKGAK
Sbjct: 121 RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSDIKQSSAETIVQRNEKKGAK 180

Query: 181 SLQYAAMKKNRPLH 195
           SLQYAAMKKNR LH
Sbjct: 181 SLQYAAMKKNRLLH 194

[Close]

BLAST of Carg18070 vs. NCBI nr
Match: XP_038887869.1 (uncharacterized protein LOC120077861 [Benincasa hispida])

HSP 1 Score: 312.4 bits (799), Expect = 2.8e-81
Identity = 160/197 (81.22%), Postives = 174/197 (88.32%), Query Frame = 0


Query: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60
           MA WFFVLLFLV  A+ATT NQTDL+ AMD+MR+KSYHGFVILL ILNSSHK L NSDIT
Sbjct: 1   MAPWFFVLLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLNILNSSHKTLQNSDIT 60

Query: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNC 120
           FFMP DQELS AAISPD +E+FVLSHS+PT L+L+NLLHFPNGSLVPSSIPNRMIS+TNC
Sbjct: 61  FFMPNDQELSLAAISPDGLEDFVLSHSVPTALLLNNLLHFPNGSLVPSSIPNRMISITNC 120

Query: 121 RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSD---IKHSSAETIVQRNEKK 180
           RKMGVC+NNA+IVTPNVCL S+IRCHGIS+TI YD TS SD    K SSAETIVQRNEKK
Sbjct: 121 RKMGVCVNNARIVTPNVCLTSSIRCHGISSTITYDKTSISDTLPAKQSSAETIVQRNEKK 180

Query: 181 GAKSLQYAAMKKNRPLH 195
            AKSLQ AAMKKNRPLH
Sbjct: 181 AAKSLQSAAMKKNRPLH 197

[Close]

BLAST of Carg18070 vs. NCBI nr
Match: XP_004149424.1 (uncharacterized protein LOC101220860 [Cucumis sativus])

HSP 1 Score: 297.0 bits (759), Expect = 1.2e-76
Identity = 153/197 (77.66%), Postives = 169/197 (85.79%), Query Frame = 0


Query: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60
           MA WFFVLLFLV  A AT  NQ DL+AAMD+MR+KSYHGF ILLKILNS+ K L NS+IT
Sbjct: 1   MAPWFFVLLFLVAKAHATMTNQIDLQAAMDEMRLKSYHGFAILLKILNSTTKTLQNSNIT 60

Query: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNC 120
           FFMP DQELS+A ISPDR+EEFVLSHSIPT L+L+NLLHFPNG+LVPSSIPNRMI +TNC
Sbjct: 61  FFMPTDQELSQADISPDRLEEFVLSHSIPTALLLNNLLHFPNGTLVPSSIPNRMIRITNC 120

Query: 121 RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSD---IKHSSAETIVQRNEKK 180
           RKMGVC+NNA+I+TPNVCL S+IRCHGIST I+YD TSFSD    K SSAE IVQRNE K
Sbjct: 121 RKMGVCLNNARIITPNVCLTSSIRCHGISTAISYDKTSFSDTLPAKQSSAEIIVQRNEIK 180

Query: 181 GAKSLQYAAMKKNRPLH 195
           GAKSLQ  AMKKNR LH
Sbjct: 181 GAKSLQSGAMKKNRSLH 197

[Close]

BLAST of Carg18070 vs. ExPASy TrEMBL
Match: A0A6J1ERK4 (uncharacterized protein LOC111435225 OS=Cucurbita moschata OX=3662 GN=LOC111435225 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.0e-102
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60
           MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT
Sbjct: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60

Query: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNC 120
           FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNC
Sbjct: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNC 120

Query: 121 RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSDIKHSSAETIVQRNEKKGAK 180
           RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSDIKHSSAETIVQRNEKKGAK
Sbjct: 121 RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSDIKHSSAETIVQRNEKKGAK 180

Query: 181 SLQYAAMKKNRPLH 195
           SLQYAAMKKNRPLH
Sbjct: 181 SLQYAAMKKNRPLH 194

[Close]

BLAST of Carg18070 vs. ExPASy TrEMBL
Match: A0A6J1JQD1 (uncharacterized protein LOC111486521 OS=Cucurbita maxima OX=3661 GN=LOC111486521 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.4e-99
Identity = 190/194 (97.94%), Postives = 192/194 (98.97%), Query Frame = 0


Query: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60
           MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT
Sbjct: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60

Query: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNC 120
           FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVL+NLLHFPNGSLVPSSIPNRMIS+TNC
Sbjct: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLNNLLHFPNGSLVPSSIPNRMISITNC 120

Query: 121 RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSDIKHSSAETIVQRNEKKGAK 180
           RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSDIK SSAETIVQRNEKKGAK
Sbjct: 121 RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSDIKQSSAETIVQRNEKKGAK 180

Query: 181 SLQYAAMKKNRPLH 195
           SLQYAAMKKNR LH
Sbjct: 181 SLQYAAMKKNRLLH 194

[Close]

BLAST of Carg18070 vs. ExPASy TrEMBL
Match: A0A0A0K7Q8 (FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G272100 PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.8e-77
Identity = 153/197 (77.66%), Postives = 169/197 (85.79%), Query Frame = 0


Query: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60
           MA WFFVLLFLV  A AT  NQ DL+AAMD+MR+KSYHGF ILLKILNS+ K L NS+IT
Sbjct: 1   MAPWFFVLLFLVAKAHATMTNQIDLQAAMDEMRLKSYHGFAILLKILNSTTKTLQNSNIT 60

Query: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNC 120
           FFMP DQELS+A ISPDR+EEFVLSHSIPT L+L+NLLHFPNG+LVPSSIPNRMI +TNC
Sbjct: 61  FFMPTDQELSQADISPDRLEEFVLSHSIPTALLLNNLLHFPNGTLVPSSIPNRMIRITNC 120

Query: 121 RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSD---IKHSSAETIVQRNEKK 180
           RKMGVC+NNA+I+TPNVCL S+IRCHGIST I+YD TSFSD    K SSAE IVQRNE K
Sbjct: 121 RKMGVCLNNARIITPNVCLTSSIRCHGISTAISYDKTSFSDTLPAKQSSAEIIVQRNEIK 180

Query: 181 GAKSLQYAAMKKNRPLH 195
           GAKSLQ  AMKKNR LH
Sbjct: 181 GAKSLQSGAMKKNRSLH 197

[Close]

BLAST of Carg18070 vs. ExPASy TrEMBL
Match: A0A6J1C1X3 (uncharacterized protein LOC111007704 OS=Momordica charantia OX=3673 GN=LOC111007704 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.2e-75
Identity = 152/198 (76.77%), Postives = 169/198 (85.35%), Query Frame = 0


Query: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60
           MA WF VLLFLVG A AT  +QTDL+AAMDDMR KSY+GFVILLKILNSS+K L  S +T
Sbjct: 1   MAPWFLVLLFLVGKAHATAIDQTDLKAAMDDMRSKSYNGFVILLKILNSSNKALQYSGMT 60

Query: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNC 120
           FFMP DQELS  AISPDR+EEFVLSHS+PT L+L+NLLHFPNGSLVPSSIPNRMIS+TNC
Sbjct: 61  FFMPTDQELSHVAISPDRLEEFVLSHSVPTPLLLNNLLHFPNGSLVPSSIPNRMISITNC 120

Query: 121 RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSD---IKHSSAETIVQRNEKK 180
           RKMGVC+NNA+I+TPNVCLNS+IRCHGISTTIAYD  S+SD    K S  E  V++NEKK
Sbjct: 121 RKMGVCVNNARIITPNVCLNSSIRCHGISTTIAYDRVSYSDTLPAKQSMFEATVRQNEKK 180

Query: 181 GAKSLQYAAMKK-NRPLH 195
           GAKSLQ AAMKK  RPLH
Sbjct: 181 GAKSLQSAAMKKTTRPLH 198

[Close]

BLAST of Carg18070 vs. ExPASy TrEMBL
Match: A0A5D3E7C1 (Fasciclin-like arabinogalactan protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G00700 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.1e-71
Identity = 145/198 (73.23%), Postives = 166/198 (83.84%), Query Frame = 0


Query: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60
           MA WFFVLLFL+  A AT  NQ DL+AAMD MR+KSYHGF ILLKILNS+ K L NS+IT
Sbjct: 1   MAPWFFVLLFLMTKAHATMTNQIDLQAAMDQMRLKSYHGFTILLKILNSTTKTLQNSNIT 60

Query: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNC 120
           FFMP DQELS+A ISP+R+++FVLSHSIPT L+L+NLLHFPNGSLVPSSIPNRMI +TNC
Sbjct: 61  FFMPTDQELSQADISPNRLKDFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNC 120

Query: 121 RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTS-FSD---IKHSSAETIVQRNEK 180
           RKMGVC+NNA+I+TPNVCL S+IRCHGIS+ I+YD TS FSD    K SSA+ IVQRNE 
Sbjct: 121 RKMGVCVNNARIITPNVCLTSSIRCHGISSAISYDKTSAFSDTLPAKQSSADIIVQRNEM 180

Query: 181 KGAKSLQYAAMKKNRPLH 195
            GAKS +  AMKKNR LH
Sbjct: 181 NGAKSSESGAMKKNRSLH 198

[Close]

BLAST of Carg18070 vs. TAIR 10
Match: AT5G26730.1 (Fasciclin-like arabinogalactan family protein )

HSP 1 Score: 149.1 bits (375), Expect = 3.8e-36
Identity = 73/145 (50.34%), Postives = 104/145 (71.72%), Query Frame = 0


Query: 16  RATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDITFFMPADQELSRAAIS 75
           R   +NQTDL +AM DMR +SY+GFVILL+ LN ++    N+DITF MP+D ++S A I+
Sbjct: 109 RHDNYNQTDLISAMTDMRRQSYNGFVILLRFLNDTN-YFRNTDITFLMPSDNDISHADIT 168

Query: 76  PDRIEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNCRKMGVCMNNAQIVTP 135
           P+ +E F+L H+IP  L+++++LHFPN +LVP S  +RM ++T     G+ +NNA+IVTP
Sbjct: 169 PESLETFILKHTIPAWLMINHMLHFPNRTLVPCSFSDRMFTITKSGGSGIYVNNARIVTP 228

Query: 136 NVCLNSAIRCHGISTTIAYDNTSFS 161
           NVC NS I CHGIS  I+++    S
Sbjct: 229 NVCQNSRISCHGISDVISFNQNYVS 252

[Close]

BLAST of Carg18070 vs. TAIR 10
Match: AT5G16920.1 (Fasciclin-like arabinogalactan family protein )

HSP 1 Score: 95.9 bits (237), Expect = 3.8e-20
Identity = 51/143 (35.66%), Postives = 86/143 (60.14%), Query Frame = 0


Query: 21  NQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDITFFMPADQELSRAAI--SPDR 80
           N  +L  A+++M   +Y  FV+L+ +L S +   L +++TF MP D+ LS + I    D 
Sbjct: 32  NNHELSIAIEEMEKANYFSFVMLINMLPSVNPRFL-ANVTFLMPKDKTLSTSNIINQQDS 91

Query: 81  IEEFVLSHSIPTRLVLSNLLHFPNGSLVPSSIPNRMISVTNCRKMGVCMNNAQIVTPNVC 140
           + EF+L HSIP+ L+  +L   PNGS+VPSS+P+  + ++N  +    +NN +I++ N+C
Sbjct: 92  VTEFLLRHSIPSSLLFEHLNLIPNGSIVPSSLPHYTLEISNGGRSNYFLNNVKIISRNIC 151

Query: 141 LNSAIRCHGISTTIAYDNTSFSD 162
              +I+CHGI   +   +T   D
Sbjct: 152 SLGSIKCHGIDGILQSPSTVDDD 173

The following BLAST results are available for this feature:

BLAST of Carg18070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928395.1	8.3e-102	100.00	uncharacterized protein LOC111435225 [Cucurbita moschata] >KAG7022813.1 hypothet...	[more]
XP_023529797.1	5.4e-101	99.48	uncharacterized protein LOC111792513 [Cucurbita pepo subsp. pepo]	[more]
XP_022989473.1	2.9e-99	97.94	uncharacterized protein LOC111486521 [Cucurbita maxima]	[more]
XP_038887869.1	2.8e-81	81.22	uncharacterized protein LOC120077861 [Benincasa hispida]	[more]
XP_004149424.1	1.2e-76	77.66	uncharacterized protein LOC101220860 [Cucumis sativus]	[more]

BLAST of Carg18070 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg18070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERK4	4.0e-102	100.00	uncharacterized protein LOC111435225 OS=Cucurbita moschata OX=3662 GN=LOC1114352...	[more]
A0A6J1JQD1	1.4e-99	97.94	uncharacterized protein LOC111486521 OS=Cucurbita maxima OX=3661 GN=LOC111486521...	[more]
A0A0A0K7Q8	5.8e-77	77.66	FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G272100 PE=3 S...	[more]
A0A6J1C1X3	3.2e-75	76.77	uncharacterized protein LOC111007704 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A5D3E7C1	2.1e-71	73.23	Fasciclin-like arabinogalactan protein 19 OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Carg18070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26730.1	3.8e-36	50.34	Fasciclin-like arabinogalactan family protein	[more]
AT5G16920.1	3.8e-20	35.66	Fasciclin-like arabinogalactan family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36069	EXPRESSED PROTEIN-RELATED	coord: 1..175
None	No IPR available	PANTHER	PTHR36069:SF4	FASCICLIN-LIKE ARABINOGALACTAN FAMILY PROTEIN	coord: 1..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18070-RA	Carg18070-RA	mRNA