Carg18058 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18058
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	fasciclin-like arabinogalactan protein 7
Location	Carg_Chr11: 11887215 .. 11887988 (+)
RNA-Seq Expression	Carg18058
Synteny	Carg18058

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTGTCCATGATTTTCACTGTTTGTAGTGCATTGTTGCTTCTGAGCTCTTCACCTGCAGATGCCAAAACAGCCAGCCCCCCGTTGCTTAGCCCGACCCCAGCACCGGCGCCAGCCCCGGATTTTGTTAACCTCACAGATCTGCTCACTGTAGCAGGTCCATTTCATACCTTCCTCAGCTACCTCCAGTCTACCAAAGTTATTGAGACCTTCCAAAACCAAGCCAATAACACAGAAGAAGGAGTGACCATCTTTGTCCCGAAAGACAGTGCGTTCTCGGCACAAAAGAAACCGTCTCTCTCGAACCTCACTGAGGATCAGCTCAAATCTCTTATGCTATTTCATGGCTTGCCACATTACTATTCTCTTGCTGAATTCAGGAACCTCAGCCTGCAGAACCCAATCTCGACGTTAGCGGGTGGACAATACAGTTTGAACTTCACAGACGTTTCAGGGACCATCCACATTGGCTCAGGTTGGACCAACACAAAAGTGAGTAGCAGTGTGCATTCAAGTGATCCTGTTGCAGTTTACCAAGTTGACAGAATTCTGCTGCCTGAGGCGATCTTCGGAACCGATATCCCCCCAACCCCAGCCCCCGCACCAGCTCCCGATATCGCTATCGCTCCCACGGCAGATTCTCCTTCAGCTGACAGTGATGGAAAGGCTGCTCCATCTTCACAACCAAAGCCATCATCTTCCCATAGGATCATCAACTGGGGGATTTTGATTCACGTTGTTTTGGCAATTTCATGTGGATTTTTGTTTTGA

mRNA sequence

ATGGAATTGTCCATGATTTTCACTGTTTGTAGTGCATTGTTGCTTCTGAGCTCTTCACCTGCAGATGCCAAAACAGCCAGCCCCCCGTTGCTTAGCCCGACCCCAGCACCGGCGCCAGCCCCGGATTTTGTTAACCTCACAGATCTGCTCACTGTAGCAGGTCCATTTCATACCTTCCTCAGCTACCTCCAGTCTACCAAAGTTATTGAGACCTTCCAAAACCAAGCCAATAACACAGAAGAAGGAGTGACCATCTTTGTCCCGAAAGACAGTGCGTTCTCGGCACAAAAGAAACCGTCTCTCTCGAACCTCACTGAGGATCAGCTCAAATCTCTTATGCTATTTCATGGCTTGCCACATTACTATTCTCTTGCTGAATTCAGGAACCTCAGCCTGCAGAACCCAATCTCGACGTTAGCGGGTGGACAATACAGTTTGAACTTCACAGACGTTTCAGGGACCATCCACATTGGCTCAGGTTGGACCAACACAAAAGTGAGTAGCAGTGTGCATTCAAGTGATCCTGTTGCAGTTTACCAAGTTGACAGAATTCTGCTGCCTGAGGCGATCTTCGGAACCGATATCCCCCCAACCCCAGCCCCCGCACCAGCTCCCGATATCGCTATCGCTCCCACGGCAGATTCTCCTTCAGCTGACAGTGATGGAAAGGCTGCTCCATCTTCACAACCAAAGCCATCATCTTCCCATAGGATCATCAACTGGGGGATTTTGATTCACGTTGTTTTGGCAATTTCATGTGGATTTTTGTTTTGA

Coding sequence (CDS)

ATGGAATTGTCCATGATTTTCACTGTTTGTAGTGCATTGTTGCTTCTGAGCTCTTCACCTGCAGATGCCAAAACAGCCAGCCCCCCGTTGCTTAGCCCGACCCCAGCACCGGCGCCAGCCCCGGATTTTGTTAACCTCACAGATCTGCTCACTGTAGCAGGTCCATTTCATACCTTCCTCAGCTACCTCCAGTCTACCAAAGTTATTGAGACCTTCCAAAACCAAGCCAATAACACAGAAGAAGGAGTGACCATCTTTGTCCCGAAAGACAGTGCGTTCTCGGCACAAAAGAAACCGTCTCTCTCGAACCTCACTGAGGATCAGCTCAAATCTCTTATGCTATTTCATGGCTTGCCACATTACTATTCTCTTGCTGAATTCAGGAACCTCAGCCTGCAGAACCCAATCTCGACGTTAGCGGGTGGACAATACAGTTTGAACTTCACAGACGTTTCAGGGACCATCCACATTGGCTCAGGTTGGACCAACACAAAAGTGAGTAGCAGTGTGCATTCAAGTGATCCTGTTGCAGTTTACCAAGTTGACAGAATTCTGCTGCCTGAGGCGATCTTCGGAACCGATATCCCCCCAACCCCAGCCCCCGCACCAGCTCCCGATATCGCTATCGCTCCCACGGCAGATTCTCCTTCAGCTGACAGTGATGGAAAGGCTGCTCCATCTTCACAACCAAAGCCATCATCTTCCCATAGGATCATCAACTGGGGGATTTTGATTCACGTTGTTTTGGCAATTTCATGTGGATTTTTGTTTTGA

Protein sequence

MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFLSYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPHYYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIINWGILIHVVLAISCGFLF

Homology

[Close]

BLAST of Carg18058 vs. NCBI nr
Match: XP_022930610.1 (fasciclin-like arabinogalactan protein 7 [Cucurbita moschata] >KAG7022824.1 Fasciclin-like arabinogalactan protein 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 491.5 bits (1264), Expect = 4.4e-135
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 120
           SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH
Sbjct: 61  SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 120

Query: 121 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN 240
           VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN
Sbjct: 181 VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN 240

Query: 241 WGILIHVVLAISCGFLF 258
           WGILIHVVLAISCGFLF
Sbjct: 241 WGILIHVVLAISCGFLF 257

[Close]

BLAST of Carg18058 vs. NCBI nr
Match: KAG6589121.1 (Fasciclin-like arabinogalactan protein 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 491.5 bits (1264), Expect = 4.4e-135
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 15  MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 74

Query: 61  SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 120
           SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH
Sbjct: 75  SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 134

Query: 121 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 135 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 194

Query: 181 VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN 240
           VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN
Sbjct: 195 VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN 254

Query: 241 WGILIHVVLAISCGFLF 258
           WGILIHVVLAISCGFLF
Sbjct: 255 WGILIHVVLAISCGFLF 271

[Close]

BLAST of Carg18058 vs. NCBI nr
Match: XP_023529774.1 (fasciclin-like arabinogalactan protein 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 488.8 bits (1257), Expect = 2.9e-134
Identity = 255/257 (99.22%), Postives = 256/257 (99.61%), Query Frame = 0


Query: 1   MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           MELSM FTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MELSMFFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 120
           SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH
Sbjct: 61  SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 120

Query: 121 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN 240
           VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTAD+PSADSDGKAAPSSQPKPSSSHRIIN
Sbjct: 181 VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADAPSADSDGKAAPSSQPKPSSSHRIIN 240

Query: 241 WGILIHVVLAISCGFLF 258
           WGILIHVVLAISCGFLF
Sbjct: 241 WGILIHVVLAISCGFLF 257

[Close]

BLAST of Carg18058 vs. NCBI nr
Match: XP_022989455.1 (fasciclin-like arabinogalactan protein 7 [Cucurbita maxima])

HSP 1 Score: 481.9 bits (1239), Expect = 3.5e-132
Identity = 251/257 (97.67%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           MELSMIFTVCSALLLLSSSP+DAKTASPPLLS +PAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MELSMIFTVCSALLLLSSSPSDAKTASPPLLSQSPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 120
           SYLQSTKVI+TFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 120

Query: 121 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN 240
           VDRILLPE IFGTDIPPTPAPAPAPDIAIAPTAD+PSADSDGKAAPSSQPKPSSSHRIIN
Sbjct: 181 VDRILLPEVIFGTDIPPTPAPAPAPDIAIAPTADAPSADSDGKAAPSSQPKPSSSHRIIN 240

Query: 241 WGILIHVVLAISCGFLF 258
           WGILIHVVLAISCGFLF
Sbjct: 241 WGILIHVVLAISCGFLF 257

[Close]

BLAST of Carg18058 vs. NCBI nr
Match: XP_022135635.1 (fasciclin-like arabinogalactan protein 7 [Momordica charantia] >XP_022135636.1 fasciclin-like arabinogalactan protein 7 [Momordica charantia])

HSP 1 Score: 448.0 bits (1151), Expect = 5.6e-122
Identity = 233/257 (90.66%), Postives = 245/257 (95.33%), Query Frame = 0


Query: 1   MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           ME SMIFTVCSALLLLSSS ADA+TASPP LSPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MEFSMIFTVCSALLLLSSSAADAQTASPPSLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 120
           SYLQSTKVI+TFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSL+LFHGLPH
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLILFHGLPH 120

Query: 121 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSLAEFRNLSLQNPI+T AGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPIATFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN 240
           VD+ILLPEAIFGTDIPPTPAPAPAPD  + P AD+PSAD +GK APSS PKPSSSH+II+
Sbjct: 181 VDKILLPEAIFGTDIPPTPAPAPAPD--VTPPADAPSADHEGKVAPSSGPKPSSSHKIIS 240

Query: 241 WGILIHVVLAISCGFLF 258
           WG+LIH+VLAIS GFLF
Sbjct: 241 WGVLIHIVLAISAGFLF 255

[Close]

BLAST of Carg18058 vs. ExPASy Swiss-Prot
Match: Q9SJ81 (Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana OX=3702 GN=FLA7 PE=2 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 9.4e-80
Identity = 170/242 (70.25%), Postives = 195/242 (80.58%), Query Frame = 0


Query: 1   MELSMIFTVCSALLLLSSSPADAKTASP--PLLSPTPAPAPAPDFVNLTDLLTVAGPFHT 60
           M+LS IF    AL++ S+S   AKTASP  P+L PTPAPAPAP+ VNLT+LL+VAGPFHT
Sbjct: 4   MQLS-IFIAVVALIVCSAS---AKTASPPAPVLPPTPAPAPAPENVNLTELLSVAGPFHT 63

Query: 61  FLSYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGL 120
           FL YL ST VIETFQNQANNTEEG+TIFVPKD AF AQK P LSNLT+DQLK L+LFH L
Sbjct: 64  FLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHAL 123

Query: 121 PHYYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAV 180
           PHYYSL+EF+NLS   P+ST AGGQYSL FTDVSGT+ I S WT TKVSSSV S+DPVAV
Sbjct: 124 PHYYSLSEFKNLSQSGPVSTFAGGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVAV 183

Query: 181 YQVDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPS-ADSDGKAAPSSQPKPSSSHR 240
           YQV+R+LLPEAIFGTD+PP PAPAPAP I  AP +DSPS ADS+G ++P S  K S    
Sbjct: 184 YQVNRVLLPEAIFGTDVPPMPAPAPAP-IVSAP-SDSPSVADSEGASSPKSSHKNSGQKL 239

[Close]

BLAST of Carg18058 vs. ExPASy Swiss-Prot
Match: Q8LEE9 (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA12 PE=2 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 1.6e-31
Identity = 95/232 (40.95%), Postives = 135/232 (58.19%), Query Frame = 0


Query: 1   MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDF-VNLTDLLTVAGPFHTF 60
           ME S+I  + + LLLL+++P         L  P+PA APAP    N+T +L  AG F  F
Sbjct: 1   MEHSLIILLFTVLLLLTTTPG-------ILSQPSPAVAPAPPGPTNVTKILEKAGQFTVF 60

Query: 61  LSYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLP 120
           +  L+ST V      Q NN++ G+TIF P DS+F+  K  +L++LT++Q   L+ FH +P
Sbjct: 61  IRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIP 120

Query: 121 HYYSLAEFRNLSLQNPISTLAG----GQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDP 180
            Y S + F+ +S  NP+ T AG    G + LN T    T++I SG TNT VS +V+S   
Sbjct: 121 SYVSSSNFQTIS--NPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQ 180

Query: 181 VAVYQVDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPS 228
           +AVYQVD++LLP+ +F    PP PAPAP+   +     DS S+  D  A  S
Sbjct: 181 LAVYQVDKVLLPQQVFDPR-PPAPAPAPSVSKSKKKKDDSDSSSDDSPADAS 222

[Close]

BLAST of Carg18058 vs. ExPASy Swiss-Prot
Match: Q9SIL7 (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6 PE=2 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 2.7e-26
Identity = 83/214 (38.79%), Postives = 125/214 (58.41%), Query Frame = 0


Query: 28  PPLLSPTPAPAPAPDF--VNLTDLLTVAGPFHTFLSYLQSTKVIETFQNQANNTEEGVTI 87
           P + S   APAP  +   +NLT +L     F T +  L +T+V      Q N++++G+TI
Sbjct: 19  PYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTI 78

Query: 88  FVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPHYYSLAEFRNLSLQNPISTLA----G 147
           F P D+AF+  K  +L++LT  Q   LML+H +P YYSL++   L   NP+ T A    G
Sbjct: 79  FAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDL--LLASNPVRTQATGQDG 138

Query: 148 GQYSLNFTD--VSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVDRILLPEAIFGTDIPPTP 207
           G + LNFT    S  +++ +G   T++++++    P+AVY VD +LLPE +FGT   PT 
Sbjct: 139 GVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEELFGTKTTPTG 198

Query: 208 APAPAPDIAIAPTADSPSADSDGKAAPSSQPKPS 234
           APAP    + +  ADSP+AD + K+A SS  + S
Sbjct: 199 APAPKSSTS-SSDADSPAADDEHKSAGSSVKRTS 229

[Close]

BLAST of Carg18058 vs. ExPASy Swiss-Prot
Match: Q8LEJ6 (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA11 PE=2 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-23
Identity = 79/223 (35.43%), Postives = 126/223 (56.50%), Query Frame = 0


Query: 36  APAPAPDF-VNLTDLLTVAGPFHTFLSYLQSTKVIETFQNQAN-NTEEGVTIFVPKDSAF 95
           APAP P    N+T +L  AG F  F+  L+ST+  +    Q N ++  G+T+F P D+AF
Sbjct: 26  APAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAF 85

Query: 96  SAQKKPSLSNLTEDQLKSLMLFHGLPHYYSLAEFRNLSLQNPISTLAG----GQYSLNFT 155
           ++ K  +L++L++ Q   L+ FH LP   ++ +F+ +S  NP+ T AG    G++ LN T
Sbjct: 86  NSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVS--NPLRTQAGDGQNGKFPLNIT 145

Query: 156 DVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVDRILLPEAIFGTDIPPTPAPAPAPDIAI 215
                ++I +G  +  V++SV+S   +AVYQVD++LLP A+FG+ +    APAPAP+   
Sbjct: 146 SSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGSSV----APAPAPEKGG 205

Query: 216 APTADSPSADSDGKAAPSSQPKPSSSHRIINWGILIHVVLAIS 253
           + +  S S   DG  +  S     +      +GI I  V AI+
Sbjct: 206 SVSKGSASGGDDGGDSTDSSDAERTG---FGFGIRITTVAAIA 239

[Close]

BLAST of Carg18058 vs. ExPASy Swiss-Prot
Match: Q9ZWA8 (Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 8.1e-23
Identity = 89/254 (35.04%), Postives = 130/254 (51.18%), Query Frame = 0


Query: 8   TVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFLSYLQSTK 67
           T+   LL+ +   A   TA P      PAP PA   +NLT +L   G F TF+  L  T+
Sbjct: 7   TLAPLLLIAAVLLATKATAQP----AAPAPEPAGP-INLTAILEKGGQFTTFIHLLNITQ 66

Query: 68  VIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPHYYSLAEF 127
           V      Q N++ EG+T+F P D+AF   K  +L+ L+ D    L+L+H  P YYS+ + 
Sbjct: 67  VGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDL 126

Query: 128 RNLSLQNPISTLAGGQ----YSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVDR 187
             LS+ NP+ T A G+    Y LNFT  +  I++ +G+  T++S+S+    P+AVY VD 
Sbjct: 127 --LSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDM 186

Query: 188 ILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIINWGI 247
           +LLP  +FG       APAP        T DS S     K A S   K  S  + +  G 
Sbjct: 187 VLLPGEMFGEHKLSPIAPAPKSKSG-GVTDDSGST----KKAASPSDKSGSGEKKVGLGF 246

Query: 248 LIHVVLAISCGFLF 258
            + +++ +   FLF
Sbjct: 247 GLGLIV-LCLKFLF 247

[Close]

BLAST of Carg18058 vs. ExPASy TrEMBL
Match: A0A6J1EXB2 (fasciclin-like arabinogalactan protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111437019 PE=3 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.1e-135
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 120
           SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH
Sbjct: 61  SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 120

Query: 121 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN 240
           VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN
Sbjct: 181 VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN 240

Query: 241 WGILIHVVLAISCGFLF 258
           WGILIHVVLAISCGFLF
Sbjct: 241 WGILIHVVLAISCGFLF 257

[Close]

BLAST of Carg18058 vs. ExPASy TrEMBL
Match: A0A6J1JME9 (fasciclin-like arabinogalactan protein 7 OS=Cucurbita maxima OX=3661 GN=LOC111486507 PE=3 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 1.7e-132
Identity = 251/257 (97.67%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           MELSMIFTVCSALLLLSSSP+DAKTASPPLLS +PAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MELSMIFTVCSALLLLSSSPSDAKTASPPLLSQSPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 120
           SYLQSTKVI+TFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 120

Query: 121 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN 240
           VDRILLPE IFGTDIPPTPAPAPAPDIAIAPTAD+PSADSDGKAAPSSQPKPSSSHRIIN
Sbjct: 181 VDRILLPEVIFGTDIPPTPAPAPAPDIAIAPTADAPSADSDGKAAPSSQPKPSSSHRIIN 240

Query: 241 WGILIHVVLAISCGFLF 258
           WGILIHVVLAISCGFLF
Sbjct: 241 WGILIHVVLAISCGFLF 257

[Close]

BLAST of Carg18058 vs. ExPASy TrEMBL
Match: A0A6J1C1K1 (fasciclin-like arabinogalactan protein 7 OS=Momordica charantia OX=3673 GN=LOC111007542 PE=3 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.7e-122
Identity = 233/257 (90.66%), Postives = 245/257 (95.33%), Query Frame = 0


Query: 1   MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           ME SMIFTVCSALLLLSSS ADA+TASPP LSPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MEFSMIFTVCSALLLLSSSAADAQTASPPSLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 120
           SYLQSTKVI+TFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSL+LFHGLPH
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLILFHGLPH 120

Query: 121 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSLAEFRNLSLQNPI+T AGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPIATFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN 240
           VD+ILLPEAIFGTDIPPTPAPAPAPD  + P AD+PSAD +GK APSS PKPSSSH+II+
Sbjct: 181 VDKILLPEAIFGTDIPPTPAPAPAPD--VTPPADAPSADHEGKVAPSSGPKPSSSHKIIS 240

Query: 241 WGILIHVVLAISCGFLF 258
           WG+LIH+VLAIS GFLF
Sbjct: 241 WGVLIHIVLAISAGFLF 255

[Close]

BLAST of Carg18058 vs. ExPASy TrEMBL
Match: A0A6J1I0D1 (fasciclin-like arabinogalactan protein 7 OS=Cucurbita maxima OX=3661 GN=LOC111468289 PE=3 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 4.3e-120
Identity = 230/257 (89.49%), Postives = 245/257 (95.33%), Query Frame = 0


Query: 1   MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           ME SMIFTVCSALLLLSSS ADA+TASPP LSP PAPAPA DFVNLTDLLTVAGPFHTFL
Sbjct: 1   MEFSMIFTVCSALLLLSSSSADAQTASPPSLSPAPAPAPASDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 120
           SYLQSTKVI+TFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLT+DQLKSL+LFHGLPH
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTDDQLKSLILFHGLPH 120

Query: 121 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           +Y+L+EFRNLSLQNPI+T AGGQYSLNFTDVSG+IHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 FYTLSEFRNLSLQNPITTFAGGQYSLNFTDVSGSIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN 240
           VD++LLPEAIFGTDIPPTPAPAPAPD  IAP AD+PSADSDGK APSS+PKPSSS+RIIN
Sbjct: 181 VDKVLLPEAIFGTDIPPTPAPAPAPD--IAPAADAPSADSDGKTAPSSEPKPSSSNRIIN 240

Query: 241 WGILIHVVLAISCGFLF 258
           WG LIH+VLAIS GFLF
Sbjct: 241 WGSLIHIVLAISGGFLF 255

[Close]

BLAST of Carg18058 vs. ExPASy TrEMBL
Match: A0A6J1GKL2 (fasciclin-like arabinogalactan protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111455217 PE=3 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 4.3e-120
Identity = 230/257 (89.49%), Postives = 245/257 (95.33%), Query Frame = 0


Query: 1   MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           ME SMIFTVCSALLLLSSS ADA+TASPP LSP PAPAPA DFVNLTDLLTVAGPFHTFL
Sbjct: 1   MEFSMIFTVCSALLLLSSSSADAQTASPPSLSPAPAPAPASDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 120
           SYLQSTKVI+TFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLT+DQLKSL+LFHGLPH
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTDDQLKSLILFHGLPH 120

Query: 121 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           +Y+L+EFRNLSLQNPI+T AGGQYSLNFTDVSG+IHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 FYTLSEFRNLSLQNPITTFAGGQYSLNFTDVSGSIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN 240
           VD++LLPEAIFGTDIPPTPAPAPAPD  IAP AD+PSADSDGK APSS+PKPSSS+RIIN
Sbjct: 181 VDKVLLPEAIFGTDIPPTPAPAPAPD--IAPAADAPSADSDGKTAPSSEPKPSSSNRIIN 240

Query: 241 WGILIHVVLAISCGFLF 258
           WG LIH+VLAIS GFLF
Sbjct: 241 WGSLIHIVLAISGGFLF 255

[Close]

BLAST of Carg18058 vs. TAIR 10
Match: AT2G04780.1 (FASCICLIN-like arabinoogalactan 7 )

HSP 1 Score: 298.1 bits (762), Expect = 6.7e-81
Identity = 170/242 (70.25%), Postives = 195/242 (80.58%), Query Frame = 0


Query: 1   MELSMIFTVCSALLLLSSSPADAKTASP--PLLSPTPAPAPAPDFVNLTDLLTVAGPFHT 60
           M+LS IF    AL++ S+S   AKTASP  P+L PTPAPAPAP+ VNLT+LL+VAGPFHT
Sbjct: 4   MQLS-IFIAVVALIVCSAS---AKTASPPAPVLPPTPAPAPAPENVNLTELLSVAGPFHT 63

Query: 61  FLSYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGL 120
           FL YL ST VIETFQNQANNTEEG+TIFVPKD AF AQK P LSNLT+DQLK L+LFH L
Sbjct: 64  FLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHAL 123

Query: 121 PHYYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAV 180
           PHYYSL+EF+NLS   P+ST AGGQYSL FTDVSGT+ I S WT TKVSSSV S+DPVAV
Sbjct: 124 PHYYSLSEFKNLSQSGPVSTFAGGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVAV 183

Query: 181 YQVDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPS-ADSDGKAAPSSQPKPSSSHR 240
           YQV+R+LLPEAIFGTD+PP PAPAPAP I  AP +DSPS ADS+G ++P S  K S    
Sbjct: 184 YQVNRVLLPEAIFGTDVPPMPAPAPAP-IVSAP-SDSPSVADSEGASSPKSSHKNSGQKL 239

[Close]

BLAST of Carg18058 vs. TAIR 10
Match: AT2G04780.2 (FASCICLIN-like arabinoogalactan 7 )

HSP 1 Score: 298.1 bits (762), Expect = 6.7e-81
Identity = 170/242 (70.25%), Postives = 195/242 (80.58%), Query Frame = 0


Query: 1   MELSMIFTVCSALLLLSSSPADAKTASP--PLLSPTPAPAPAPDFVNLTDLLTVAGPFHT 60
           M+LS IF    AL++ S+S   AKTASP  P+L PTPAPAPAP+ VNLT+LL+VAGPFHT
Sbjct: 4   MQLS-IFIAVVALIVCSAS---AKTASPPAPVLPPTPAPAPAPENVNLTELLSVAGPFHT 63

Query: 61  FLSYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGL 120
           FL YL ST VIETFQNQANNTEEG+TIFVPKD AF AQK P LSNLT+DQLK L+LFH L
Sbjct: 64  FLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHAL 123

Query: 121 PHYYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAV 180
           PHYYSL+EF+NLS   P+ST AGGQYSL FTDVSGT+ I S WT TKVSSSV S+DPVAV
Sbjct: 124 PHYYSLSEFKNLSQSGPVSTFAGGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVAV 183

Query: 181 YQVDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPS-ADSDGKAAPSSQPKPSSSHR 240
           YQV+R+LLPEAIFGTD+PP PAPAPAP I  AP +DSPS ADS+G ++P S  K S    
Sbjct: 184 YQVNRVLLPEAIFGTDVPPMPAPAPAP-IVSAP-SDSPSVADSEGASSPKSSHKNSGQKL 239

[Close]

BLAST of Carg18058 vs. TAIR 10
Match: AT5G60490.1 (FASCICLIN-like arabinogalactan-protein 12 )

HSP 1 Score: 137.9 bits (346), Expect = 1.2e-32
Identity = 95/232 (40.95%), Postives = 135/232 (58.19%), Query Frame = 0


Query: 1   MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDF-VNLTDLLTVAGPFHTF 60
           ME S+I  + + LLLL+++P         L  P+PA APAP    N+T +L  AG F  F
Sbjct: 1   MEHSLIILLFTVLLLLTTTPG-------ILSQPSPAVAPAPPGPTNVTKILEKAGQFTVF 60

Query: 61  LSYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLP 120
           +  L+ST V      Q NN++ G+TIF P DS+F+  K  +L++LT++Q   L+ FH +P
Sbjct: 61  IRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIP 120

Query: 121 HYYSLAEFRNLSLQNPISTLAG----GQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDP 180
            Y S + F+ +S  NP+ T AG    G + LN T    T++I SG TNT VS +V+S   
Sbjct: 121 SYVSSSNFQTIS--NPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQ 180

Query: 181 VAVYQVDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPS 228
           +AVYQVD++LLP+ +F    PP PAPAP+   +     DS S+  D  A  S
Sbjct: 181 LAVYQVDKVLLPQQVFDPR-PPAPAPAPSVSKSKKKKDDSDSSSDDSPADAS 222

[Close]

BLAST of Carg18058 vs. TAIR 10
Match: AT2G20520.1 (FASCICLIN-like arabinogalactan 6 )

HSP 1 Score: 120.6 bits (301), Expect = 1.9e-27
Identity = 83/214 (38.79%), Postives = 125/214 (58.41%), Query Frame = 0


Query: 28  PPLLSPTPAPAPAPDF--VNLTDLLTVAGPFHTFLSYLQSTKVIETFQNQANNTEEGVTI 87
           P + S   APAP  +   +NLT +L     F T +  L +T+V      Q N++++G+TI
Sbjct: 19  PYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTI 78

Query: 88  FVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPHYYSLAEFRNLSLQNPISTLA----G 147
           F P D+AF+  K  +L++LT  Q   LML+H +P YYSL++   L   NP+ T A    G
Sbjct: 79  FAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDL--LLASNPVRTQATGQDG 138

Query: 148 GQYSLNFTD--VSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVDRILLPEAIFGTDIPPTP 207
           G + LNFT    S  +++ +G   T++++++    P+AVY VD +LLPE +FGT   PT 
Sbjct: 139 GVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEELFGTKTTPTG 198

Query: 208 APAPAPDIAIAPTADSPSADSDGKAAPSSQPKPS 234
           APAP    + +  ADSP+AD + K+A SS  + S
Sbjct: 199 APAPKSSTS-SSDADSPAADDEHKSAGSSVKRTS 229

[Close]

BLAST of Carg18058 vs. TAIR 10
Match: AT5G03170.1 (FASCICLIN-like arabinogalactan-protein 11 )

HSP 1 Score: 111.7 bits (278), Expect = 8.9e-25
Identity = 79/223 (35.43%), Postives = 126/223 (56.50%), Query Frame = 0


Query: 36  APAPAPDF-VNLTDLLTVAGPFHTFLSYLQSTKVIETFQNQAN-NTEEGVTIFVPKDSAF 95
           APAP P    N+T +L  AG F  F+  L+ST+  +    Q N ++  G+T+F P D+AF
Sbjct: 26  APAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAF 85

Query: 96  SAQKKPSLSNLTEDQLKSLMLFHGLPHYYSLAEFRNLSLQNPISTLAG----GQYSLNFT 155
           ++ K  +L++L++ Q   L+ FH LP   ++ +F+ +S  NP+ T AG    G++ LN T
Sbjct: 86  NSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVS--NPLRTQAGDGQNGKFPLNIT 145

Query: 156 DVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVDRILLPEAIFGTDIPPTPAPAPAPDIAI 215
                ++I +G  +  V++SV+S   +AVYQVD++LLP A+FG+ +    APAPAP+   
Sbjct: 146 SSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGSSV----APAPAPEKGG 205

Query: 216 APTADSPSADSDGKAAPSSQPKPSSSHRIINWGILIHVVLAIS 253
           + +  S S   DG  +  S     +      +GI I  V AI+
Sbjct: 206 SVSKGSASGGDDGGDSTDSSDAERTG---FGFGIRITTVAAIA 239

The following BLAST results are available for this feature:

BLAST of Carg18058 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930610.1	4.4e-135	100.00	fasciclin-like arabinogalactan protein 7 [Cucurbita moschata] >KAG7022824.1 Fasc...	[more]
KAG6589121.1	4.4e-135	100.00	Fasciclin-like arabinogalactan protein 7, partial [Cucurbita argyrosperma subsp....	[more]
XP_023529774.1	2.9e-134	99.22	fasciclin-like arabinogalactan protein 7 [Cucurbita pepo subsp. pepo]	[more]
XP_022989455.1	3.5e-132	97.67	fasciclin-like arabinogalactan protein 7 [Cucurbita maxima]	[more]
XP_022135635.1	5.6e-122	90.66	fasciclin-like arabinogalactan protein 7 [Momordica charantia] >XP_022135636.1 f...	[more]

BLAST of Carg18058 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ81	9.4e-80	70.25	Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana OX=3702 GN=FLA7...	[more]
Q8LEE9	1.6e-31	40.95	Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9SIL7	2.7e-26	38.79	Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6...	[more]
Q8LEJ6	1.2e-23	35.43	Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9ZWA8	8.1e-23	35.04	Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9...	[more]

BLAST of Carg18058 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EXB2	2.1e-135	100.00	fasciclin-like arabinogalactan protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JME9	1.7e-132	97.67	fasciclin-like arabinogalactan protein 7 OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1C1K1	2.7e-122	90.66	fasciclin-like arabinogalactan protein 7 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1I0D1	4.3e-120	89.49	fasciclin-like arabinogalactan protein 7 OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]
A0A6J1GKL2	4.3e-120	89.49	fasciclin-like arabinogalactan protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Carg18058 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04780.1	6.7e-81	70.25	FASCICLIN-like arabinoogalactan 7	[more]
AT2G04780.2	6.7e-81	70.25	FASCICLIN-like arabinoogalactan 7	[more]
AT5G60490.1	1.2e-32	40.95	FASCICLIN-like arabinogalactan-protein 12	[more]
AT2G20520.1	1.9e-27	38.79	FASCICLIN-like arabinogalactan 6	[more]
AT5G03170.1	8.9e-25	35.43	FASCICLIN-like arabinogalactan-protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 84..188 e-value: 4.2E-22 score: 89.4
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 56..187 e-value: 1.0E-20 score: 74.2
IPR000782	FAS1 domain	PROSITE	PS50213	FAS1	coord: 43..185 score: 19.081652
IPR036378	FAS1 domain superfamily	GENE3D	2.30.180.10	FAS1 domain	coord: 31..188 e-value: 2.9E-16 score: 62.0
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 37..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..235
None	No IPR available	PANTHER	PTHR32077:SF70	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7	coord: 2..255
IPR045003	Fasciclin-like arabinogalactan protein, group A	PANTHER	PTHR32077	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	coord: 2..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18058-RA	Carg18058-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009834	plant-type secondary cell wall biogenesis
cellular_component	GO:0005886	plasma membrane