Carg18048 (gene) Silver-seed gourd (SMH-JMG-627) v2
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TATTGAAATTTTATAATAAACTAATTTAATCTTAAAAAGAAAAAGAAAAAAAAAAAAAAAAAGGGAAAGAAATGAAAACACCCAAATTTCTCGGGACGCGGCGGCTGGGTTGGACAATGAATGCCCCCAGTCCAAGACGGGAGCTCTGTTCGTTGTGGCTTGCACAGAACTTCTCGCCGCATTCTCATGTTTGCCGATGGCTTCCTTCGCTGCTAGGGCCATTTTGCGATCCTCCTCCGGCAAGGCTACGGCTCTTCTGAGTGCCGGAGCCAGAGCGGGCTCGGCTCGTTCAACATTTCGCATTTCTTCCGAACGATCTTTCTCTCAGTGTGCTGTATGTAAGGTAATTTCCTCAAGCATTTGATTTCAACGAAGTGTGTTCAAACTAAATCAACTATAAAAACTGTGTGAGTTGAGTTAAGTGCGAGGATTGAGGATCGAGATAGGGTATTTGTGCGGCTATAGATCTGAACAAACGTTGATATTGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTTCACTTTGAGCATAAGCTGTCATGGCTTTGATGGCTTTGCTTTGGGCTTCCTCAAAAGGCCTCGTCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTAGACAATATCGTACCATTGTGGAGAGTTGTGTTCGTCTAACATGGTATTAGAGTCATGCCCTAAACTTAGTCGTGCCAATAAATTGGTAAATCCTCAAATGTCGAACAAAGGACTCCAAAAGAAGAGGAGTCAATCCTCCTCGAAGGCAAAGTAAAAAATGACTAAGACTCCTTAGAATCGAGTCTCGATTAAGGGGAGACGTACTTTGTTCGAGGGGAAGTGTTGGATGATGAAATCCCACATCGGCTAATTTAGGGAATAATCATGGGTTTATAATCAAAGAATACTATCTCCATTGGTGCGAGGCCTTTTGGGGAAGCTCAAAGTAAAGTCATGAGAGATTATGTTCAAAAAGTGGACAATATCATCGTGGAGAGTCATGTTGAACAAAATATGAGTAGAAAATAAGGTAGTAATGTTTTTCTTTCTGTGAAGGATTCCAGTTGAAATGAGCTTGTGTGTGGAGTCCATGTTTCCGCTCCATTCTGCTACTTCTTCGGCATTGATGACTCCGATGATGCATTCTGTCTCTCGCCATAGTTATGGTTGGCTTTCGGAAGAGGTACTTTCAATCTCTTCTTGTTCCTCTAGTGGTTTCTAGGAATTGGACTAAGTTATGATCCAACTGTATCCATTTTCATGCTCGGCAATCATACTAGGATGAATTTTTACTCTTTTCAATCTTCTTATGCTGCGAGTTTGTTGTTTGAGTTTCTTATTATTGTTGGTATGAATTAAAACCTGCTCGGTTAGTTGAATAGCTTTATTAGTTACTTGGATTGCCTTTGTTATGCACAACACATTGGAATACTATCTTCATTGGTACGAGACCTTTTGGGGAAACCCAAAGCAAAGTCATGAGAGCTTATGCTCAAAGTGGGCAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACAGACCCAACTGTAGCCATTTTCATGCTCGACAATCATACTAGAATGAATTTTTACTCTTTTCAATGTTCTTATGCTGTGAGTTTGTTATTTGAGTTTCTGATTTTTGTCCATATGAATTAAAACCTGCTCTGTTACTTGAATAGCTTTGTTAATTACTTGGATTGCGTTTGTGATGCACAACACATTGGAGGATAACTTGTGATATACACAATTGATCCTTCAAATTTGGACATTAGAATGCAGGAAGAGTACTTGTTCTTCTACAAGAAACATGATATTGAAATTTTATAATAAACTAATTTAATCTTAAAAAGAAAAAGAAAAAAAAAAAAAAAAAGGGAAAGAAATGAAAACACCCAAATTTCTCGGGACGCGGCGGCTGGGTTGGACAATGAATGCCCCCAGTCCAAGACGGGAGCTCTGTTCGTTGTGGCTTGCACAGAACTTCTCGCCGCATTCTCATGTTTGCCGATGGCTTCCTTCGCTGCTAGGGCCATTTTGCGATCCTCCTCCGGCAAGGCTACGGCTCTTCTGAGTGCCGGAGCCAGAGCGGGCTCGGCTCGTTCAACATTTCGCATTTCTTCCGAACGATCTTTCTCTCAGTGTGCTGTATGTAAGAATGCAGGAAGAGTACTTGTTCTTCTACAAGAAACATGA ATGGCTTCCTTCGCTGCTAGGGCCATTTTGCGATCCTCCTCCGGCAAGGCTACGGCTCTTCTGAGTGCCGGAGCCAGAGCGGGCTCGGCTCGTTCAACATTTCGCATTTCTTCCGAACGATCTTTCTCTCAGTGTGCTGTATGTAAGAATGCAGGAAGAGTACTTGTTCTTCTACAAGAAACATGA MASFAARAILRSSSGKATALLSAGARAGSARSTFRISSERSFSQCAVCKNAGRVLVLLQET Homology
BLAST of Carg18048 vs. NCBI nr
Match: KAG7022834.1 (hypothetical protein SDJN02_16570 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 107.1 bits (266), Expect = 5.6e-20 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of Carg18048 vs. NCBI nr
Match: KAG6589135.1 (DDB1- and CUL4-associated factor 13, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12 Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of Carg18048 vs. NCBI nr
Match: XP_038887457.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X3 [Benincasa hispida]) HSP 1 Score: 59.7 bits (143), Expect = 1.0e-05 Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = 0
BLAST of Carg18048 vs. NCBI nr
Match: XP_038887456.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X2 [Benincasa hispida]) HSP 1 Score: 59.7 bits (143), Expect = 1.0e-05 Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = 0
BLAST of Carg18048 vs. NCBI nr
Match: XP_038887455.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X1 [Benincasa hispida]) HSP 1 Score: 59.7 bits (143), Expect = 1.0e-05 Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = 0
BLAST of Carg18048 vs. ExPASy TrEMBL
Match: A0A6J1HZK6 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468354 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.9e-05 Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 0
BLAST of Carg18048 vs. ExPASy TrEMBL
Match: A0A6J1I278 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468354 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.9e-05 Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 0
BLAST of Carg18048 vs. ExPASy TrEMBL
Match: A0A6J1GM60 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455225 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.9e-05 Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 0
BLAST of Carg18048 vs. ExPASy TrEMBL
Match: A0A6J1GM36 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455225 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.9e-05 Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 0
BLAST of Carg18048 vs. ExPASy TrEMBL
Match: A0A5D3CTR8 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00250 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 9.3e-05 Identity = 34/43 (79.07%), Postives = 36/43 (83.72%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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