Carg18047 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18047
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DDB1- and CUL4-associated factor 13
Location	Carg_Chr11: 11970634 .. 11975416 (-)
RNA-Seq Expression	Carg18047
Synteny	Carg18047

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAACGTCTTCTGCTCCACCCTGCTAGGGTTTTTCTCTCAGTTGTCCTCGTCTGTCCTCACTTGCATCCTTCCGATAATACTTGACCGTGCAGTTTTGAGTTTTGTTTCTCAAGAATGAAGGTCAAGGTAATATCTCGCTCCACTGATGAATTCACTCGAGAACGAAGCCAAGACCTTCAGGTGATTAATAGACGCGAACTTTTTTTCGTTTGTTGAATTTATTTCTTGCAACATGAATTGACATCGTGTTATTTGCATTAGAGGGTATTTCGGAACTTCGACCCCAATCTCCGAACGCAAGAGAAGGCGGTTGAGTATGTTCGTGCTATTAATGCAGCGAAATTGGACAGGGTAATGCTATGATTTGAAACTATTGTTTACGTCAGCTGATTTGTCGAGCAATTTCGAAAGTTTTTTAAATTGTCTTTTGCTTTCTGTGTTTTAGATGTTTGCAAAACCATTTATAGGAGCAATGGATGGGCATTTAGACGCTGTTTCATGTATGGCAAAGAATCCCAATCATTTGAAAGGGATATTTTCCGGTTCGATGGATGGAGGTACGATTTTCAATATTCCAGCTGCTAGGCTAATGACTTGATGTTTTTAGTTTTTCTTCGATGGTGTTCGTGAAGTTGGCAGAGGTTAGCTTGGAAGATTTTAGAAAATTTCCGTTAAAATCTTGTGGGTTCTTTTGGTAAGCCTCTCATTGAACTGTACAGTTGTTGGAACCTTATACTAGAATCTTAAATTTTAATTTGCAGTAGCTTGTTATTTTCTATTTCCAGCATTGAGATTTTCTTTTTATATACTGTAGTGATCTCCATCGATAAATTTTAATTTGAAGCAGTTTAGTAATCTCCATCGATTAATTGTACTGCACTACTCTTGCTGCATTCAAACAATGATATAACTTGTCATGCCTCGTAGTTGTTTTATATCTGACTTTATCTTTGCTTTGTTTTATTTTTGTTTTTATATCTACAGATATTCGCCTATGGGATATTGCTAACAGGTAATGTGATGCTTCCCACCTTTTGGTGTTTGAAATTTTGTTTTTATAGTGACCCAAAAATTTAAAAGAGAGATATAGCACCGTAATTAAAAATCCAAAATTAAATGCTAACCCGTATACAATATAGGCGAACGGTTTGTCAGTTTCCTGGACATCAAGGTGCTGTTCGAGGCTTGACTTCATCTTCAGATGGACGCATCTTGATATCATGTGGGACAGATTGCACGTAAGTCACCATTATTATATTCTATGTACTTTAGAATGTTACACTGTTGTAATTTTCTACGTTTGTTTGTTTTAGTGTCAGGCTATGGAATATCCCAATTCCCACTCTGAATTCTTATGAAACTTCAAACAATTCATCTGAGGTGTGTTATTGAATTATCTATACGTTGCATTGAAGAATTTTTTTGTACTATTACCGACTAACATCTTGAAAATCATACATTCAGCCTCTGGCAGTTTATGTTTGGAAGAATGCTTTCTGGTGAGTTTTAAATTTTAGAAAGTTTTTTCTTTCCATCTTTCGATCCAAGTTATCTTTTTATTTGAGCCAAAATTTTTATTTATAGGGCTGTTGATCATCAATGGGATGGAAATCTTTTTGCCACGGCTGGTGCTCAACTAAATATCTGGGATCACAACAGGTATCCATCGCCATTCATTTAATTCAGTACTTTCCTTTATTCTTGTTATATATTGAGGATTTTTTAAATTTTCTTATAGGTCTCAACCAGTGAGCAGTTTTGAGTGGGGAACAGACTCAGTTATCTCTGTTCGTTTCAATCCTGGAGAACCCAATGTCCTCGCAACATCAGCTAGGTATGCATGATCAGTCGTGGCCTAACTGCCATTCTTTATTTGTATGAGCACAGATGCCAGTTTACTTAATAATGGTCTATGCGTAATGCTTGTTATGCACTTTTTAGTTTGCACTAGGTCTATTCTTTCTCTATCTCCTGGTGTTTAAGGCAATAATCTTTTTCGTTCTTTCTGGAACTGAAACGTCAAATTCTTAACCGTAAACGAATTTTAAACTAATAAGTTCTGTGCATTTTTAGCCGGATTAAAAGTTACATTTGGTAGTTTTTCTTTATGTTTATCTTACTTTCCCATGTCTGGAAACTGTAATATTCAATTAAAAAGTTGGTTCTTTTTTGTGCTTTGTTTAATAGTTACTACTGTAATATTCAAGTAGTGTGAATTTGAAATTTTGAACTAGCTCTATCAGAAAAAACAGGACAGATATTGAGCTAGTAATGATATTAGATCCGGTAGAATTTTCTGTGTTGCCAATTGGTTTACTTTCAGAAAATTTTCAACTTTGTATGATGATAATAGTTTTATCCCTCTATGTTGTTCTTTGTCTTGTCTTGTAGTGATCGAAGCATTACATTGTATGATTTGCGCATGTCATCCCCCGTAAGGAAAATAATTATGCAGGTATGATAGTGGCGGTTAGTCAAAGGAGTTCCTTCTTTGCGAAAACGACCTTTTATTATGTTTCTTGTATTCTTATTGTTACCTTTCTTGTGACAGACGAAGACAAATTCCATTTGTTGGAATCCAAGGGAGCCAATGAACTTCACTGCTGTAAGCATTTTAACATTCTTATTCCTTGAAGTTGTTGTCTTAGCTTTTTGGCTCATACTACTTACATCCTTGTGCATTCATTATGATTAATCAAATCTTCTTTGCTCTAATGTATATTAAATAGTTTAAAGCATTCATCATTATTGAATTTTCTAATTAGCCTTGACTTTTTAATGTTATCTATATCTCTTAGCCATCTAGTATGTATGAACTTGTTCTTCATTCCCGTCAGCATGACATGTCTTATGTTATGAATTGCAGGCAAATGAAGACTGCAACTGTTATAGCTACGATTCTAGGAGACTAGACGAGGCAAAATGTGTGCACAGAGATCATGTATCTGCAGTGTAAGATACGGACTTGTGATTTTTGTTTGTAAGAACTAGAGTGCCACTCCTAATCTTCATTCTTTATTAAAACCCATCTGAAGATTCATCTTTTTGTTTTCAGAATGGATATTGATTTTTCACCGAGTGGTCGAGAATTTGTTACTGGCTCATATGATAGAACAGTGAGTTATAGCCCCCGGTTATTTTCAGCCATTTATATCTTGTTTTCCAAGATATGTTATTGAACTTGTCATGTATTAATTCTGCAGATAAGAATTTTCCCGTATAATGGGGGTCACAGCCGTGAGATTTATCATACCAAAAGAATGCAAAGGTTTGATCCATATTCATTATTTATAGGTTTATCATTTGATCGTAGCCTTCCAATGTACTACTAGTTTCAATACTTAAGCGATTGCTCAAATATGAACAGCAACTGATTCTTTTGCGCTGATGTTACTCTCTCCTTTTTGGTATTTGTAGGGTCTTCTGTGTCAGGTTCAGCTGTGATGCAAGCTATGTAATATCAGGGAGTGACGACACGAACCTTCGGCTTTGGAAGGCTAAAGCATCTGAACAATTAGGAGTTGTAAGAAATCTTCTATCTGTATTTTTGCTCTGTTCTGCACTTGTTCGATCTGGATGCGTTTATTTTTCAGTTTCTCTTTTGAGAAAATACCCAATATTTTTACCAAAAGAACTAATTCATCAACTTTATTCTATAAAAGCTTCGATGAAAACTACTGTCTTGATCAGGTGGAACATGATGTTAGTCTAAAGTGATAGTATTTCATAATTTTTGATGTTGTAATGGTTAATGTTTGTAATAACAGTTGATAGAAGCCATGATTTGCTTTTAAATTGAATTAATGTTGCTGCAGCTTCTTCCAAGGGAGAAGAGAAAGCATGAATATCAAGAGGCTGTTAAGAATCGTTATAAACATCTTCCCGAGGTTAAGCGTATTGTCAGGTAAGAATCGTGTCGATGTTCATTATCTGTTTTCCTACCTGCATCCGATATTTCCATGAGCATGTGTATGTATAACATACACCCAGTTTCTCTTCTATTGTGAAGTGCCATCTCCTACGCTGTACTCGGGTAATAAACTGTATTAGATAGGGGTTTTGAAACTACGATTTTTGGTTCGTTATCGCAGGCATAGGCATTTACCTAAACCAATATTCAAAGCTGCTGCCCTCCGTCGCACTATTGTCGATGCCGAACGAAAGAAGGCTGAGAGGAGGAAAGCTCACAGCGCTCCTGGGAGCATTTCAACTGTACCACTCCGTAGAAGAAGAATTATCAAAGAAGTTGAGTAAACTAACTACGAACCAGGAGAGGAGGGGACAATTAGAAACTCGTGAGCTTCGAAGGATTGATCGGTAAGGTTCTTAACATTACGATTCAGGCATCAGTAGTTCTCAAGATTTTTCCAATACCCTGCCCTCATCCCATGGTTTCGACCGACAGTTGAACGAGCGTAGGAGTGAAAATTTTGCCGTGTTGTACAAATTCTTGATTGTCGATCGAGTAGCTCGACGTCTTGCTAAACTATACCAAAGTAACCTTTGGCTTTCAGCTTGTTTAGCTTTATGAATGTGTTAAACCTCATCAAATTTTAGTTCTTTGACTATATTTAGGCCCTGTAATACCCAACTCAGACGATGTCGGTTGGCTTTATTTTCGACTTCCCAATGATCAATACAAATTACATATCAGCACGTCGTTTATGAGAAACTCCTATATATTGCTGTTACGTATAGAGCTCCTTCTAGTGCCTAGATTTACGACTCCAAAGCTTTCGTTTGTTATTCGTGAATTATAGTATAGTTTTAAATAAGAACCT

mRNA sequence

TTTAACGTCTTCTGCTCCACCCTGCTAGGGTTTTTCTCTCAGTTGTCCTCGTCTGTCCTCACTTGCATCCTTCCGATAATACTTGACCGTGCAGTTTTGAGTTTTGTTTCTCAAGAATGAAGGTCAAGGTAATATCTCGCTCCACTGATGAATTCACTCGAGAACGAAGCCAAGACCTTCAGAGGGTATTTCGGAACTTCGACCCCAATCTCCGAACGCAAGAGAAGGCGGTTGAGTATGTTCGTGCTATTAATGCAGCGAAATTGGACAGGATGTTTGCAAAACCATTTATAGGAGCAATGGATGGGCATTTAGACGCTGTTTCATGTATGGCAAAGAATCCCAATCATTTGAAAGGGATATTTTCCGGTTCGATGGATGGAGATATTCGCCTATGGGATATTGCTAACAGGCGAACGGTTTGTCAGTTTCCTGGACATCAAGGTGCTGTTCGAGGCTTGACTTCATCTTCAGATGGACGCATCTTGATATCATGTGGGACAGATTGCACTGTCAGGCTATGGAATATCCCAATTCCCACTCTGAATTCTTATGAAACTTCAAACAATTCATCTGAGCCTCTGGCAGTTTATGTTTGGAAGAATGCTTTCTGGGCTGTTGATCATCAATGGGATGGAAATCTTTTTGCCACGGCTGGTGCTCAACTAAATATCTGGGATCACAACAGGTCTCAACCAGTGAGCAGTTTTGAGTGGGGAACAGACTCAGTTATCTCTGTTCGTTTCAATCCTGGAGAACCCAATGTCCTCGCAACATCAGCTAGTGATCGAAGCATTACATTGTATGATTTGCGCATGTCATCCCCCGTAAGGAAAATAATTATGCAGACGAAGACAAATTCCATTTGTTGGAATCCAAGGGAGCCAATGAACTTCACTGCTGCAAATGAAGACTGCAACTGTTATAGCTACGATTCTAGGAGACTAGACGAGGCAAAATGTGTGCACAGAGATCATGTATCTGCAGTAATGGATATTGATTTTTCACCGAGTGGTCGAGAATTTGTTACTGGCTCATATGATAGAACAATAAGAATTTTCCCGTATAATGGGGGTCACAGCCGTGAGATTTATCATACCAAAAGAATGCAAAGGGTCTTCTGTGTCAGGTTCAGCTGTGATGCAAGCTATGTAATATCAGGGAGTGACGACACGAACCTTCGGCTTTGGAAGGCTAAAGCATCTGAACAATTAGGAGTTCTTCTTCCAAGGGAGAAGAGAAAGCATGAATATCAAGAGGCTGTTAAGAATCGTTATAAACATCTTCCCGAGGTTAAGCGTATTGTCAGGCATAGGCATTTACCTAAACCAATATTCAAAGCTGCTGCCCTCCGTCGCACTATTGTCGATGCCGAACGAAAGAAGGCTGAGAGGAGGAAAGCTCACAGCGCTCCTGGGAGCATTTCAACTGTACCACTCCGTAGAAGAAGAATTATCAAAGAAGTTGAGTAAACTAACTACGAACCAGGAGAGGAGGGGACAATTAGAAACTCGTGAGCTTCGAAGGATTGATCGGTAAGGTTCTTAACATTACGATTCAGGCATCAGTAGTTCTCAAGATTTTTCCAATACCCTGCCCTCATCCCATGGTTTCGACCGACAGTTGAACGAGCGTAGGAGTGAAAATTTTGCCGTGTTGTACAAATTCTTGATTGTCGATCGAGTAGCTCGACGTCTTGCTAAACTATACCAAAGTAACCTTTGGCTTTCAGCTTGTTTAGCTTTATGAATGTGTTAAACCTCATCAAATTTTAGTTCTTTGACTATATTTAGGCCCTGTAATACCCAACTCAGACGATGTCGGTTGGCTTTATTTTCGACTTCCCAATGATCAATACAAATTACATATCAGCACGTCGTTTATGAGAAACTCCTATATATTGCTGTTACGTATAGAGCTCCTTCTAGTGCCTAGATTTACGACTCCAAAGCTTTCGTTTGTTATTCGTGAATTATAGTATAGTTTTAAATAAGAACCT

Coding sequence (CDS)

ATGAAGGTCAAGGTAATATCTCGCTCCACTGATGAATTCACTCGAGAACGAAGCCAAGACCTTCAGAGGGTATTTCGGAACTTCGACCCCAATCTCCGAACGCAAGAGAAGGCGGTTGAGTATGTTCGTGCTATTAATGCAGCGAAATTGGACAGGATGTTTGCAAAACCATTTATAGGAGCAATGGATGGGCATTTAGACGCTGTTTCATGTATGGCAAAGAATCCCAATCATTTGAAAGGGATATTTTCCGGTTCGATGGATGGAGATATTCGCCTATGGGATATTGCTAACAGGCGAACGGTTTGTCAGTTTCCTGGACATCAAGGTGCTGTTCGAGGCTTGACTTCATCTTCAGATGGACGCATCTTGATATCATGTGGGACAGATTGCACTGTCAGGCTATGGAATATCCCAATTCCCACTCTGAATTCTTATGAAACTTCAAACAATTCATCTGAGCCTCTGGCAGTTTATGTTTGGAAGAATGCTTTCTGGGCTGTTGATCATCAATGGGATGGAAATCTTTTTGCCACGGCTGGTGCTCAACTAAATATCTGGGATCACAACAGGTCTCAACCAGTGAGCAGTTTTGAGTGGGGAACAGACTCAGTTATCTCTGTTCGTTTCAATCCTGGAGAACCCAATGTCCTCGCAACATCAGCTAGTGATCGAAGCATTACATTGTATGATTTGCGCATGTCATCCCCCGTAAGGAAAATAATTATGCAGACGAAGACAAATTCCATTTGTTGGAATCCAAGGGAGCCAATGAACTTCACTGCTGCAAATGAAGACTGCAACTGTTATAGCTACGATTCTAGGAGACTAGACGAGGCAAAATGTGTGCACAGAGATCATGTATCTGCAGTAATGGATATTGATTTTTCACCGAGTGGTCGAGAATTTGTTACTGGCTCATATGATAGAACAATAAGAATTTTCCCGTATAATGGGGGTCACAGCCGTGAGATTTATCATACCAAAAGAATGCAAAGGGTCTTCTGTGTCAGGTTCAGCTGTGATGCAAGCTATGTAATATCAGGGAGTGACGACACGAACCTTCGGCTTTGGAAGGCTAAAGCATCTGAACAATTAGGAGTTCTTCTTCCAAGGGAGAAGAGAAAGCATGAATATCAAGAGGCTGTTAAGAATCGTTATAAACATCTTCCCGAGGTTAAGCGTATTGTCAGGCATAGGCATTTACCTAAACCAATATTCAAAGCTGCTGCCCTCCGTCGCACTATTGTCGATGCCGAACGAAAGAAGGCTGAGAGGAGGAAAGCTCACAGCGCTCCTGGGAGCATTTCAACTGTACCACTCCGTAGAAGAAGAATTATCAAAGAAGTTGAGTAA

Protein sequence

MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIGAMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSDGRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATAGAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRKIIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSGREFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKAKASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAERKKAERRKAHSAPGSISTVPLRRRRIIKEVE

Homology

[Close]

BLAST of Carg18047 vs. NCBI nr
Match: XP_023529241.1 (DDB1- and CUL4-associated factor 13-like [Cucurbita pepo subsp. pepo] >KAG7022835.1 DDB1- and CUL4-associated factor 13 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 924.5 bits (2388), Expect = 3.6e-265
Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60
           MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120
           AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD
Sbjct: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120

Query: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA
Sbjct: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180

Query: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240
           GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK
Sbjct: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240

Query: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300
           IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420

Query: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 452
           RKKAERRKAHSAPGSISTVPLRRRRIIKEVE
Sbjct: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 451

[Close]

BLAST of Carg18047 vs. NCBI nr
Match: XP_022988775.1 (DDB1- and CUL4-associated factor 13-like [Cucurbita maxima])

HSP 1 Score: 922.5 bits (2383), Expect = 1.4e-264
Identity = 450/451 (99.78%), Postives = 450/451 (99.78%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60
           MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120
           AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD
Sbjct: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120

Query: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA
Sbjct: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180

Query: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240
           GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK
Sbjct: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240

Query: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300
           IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALR TIVDAE
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRHTIVDAE 420

Query: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 452
           RKKAERRKAHSAPGSISTVPLRRRRIIKEVE
Sbjct: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 451

[Close]

BLAST of Carg18047 vs. NCBI nr
Match: XP_022930776.1 (DDB1- and CUL4-associated factor 13-like [Cucurbita moschata])

HSP 1 Score: 918.7 bits (2373), Expect = 2.0e-263
Identity = 449/451 (99.56%), Postives = 450/451 (99.78%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60
           MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120
           AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTV QFPGHQGAVRGLTSSSD
Sbjct: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVFQFPGHQGAVRGLTSSSD 120

Query: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRILISCGTDCTVRLWNIPIP+LNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA
Sbjct: 121 GRILISCGTDCTVRLWNIPIPSLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180

Query: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240
           GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK
Sbjct: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240

Query: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300
           IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420

Query: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 452
           RKKAERRKAHSAPGSISTVPLRRRRIIKEVE
Sbjct: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 451

[Close]

BLAST of Carg18047 vs. NCBI nr
Match: KAG6589135.1 (DDB1- and CUL4-associated factor 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 909.1 bits (2348), Expect = 1.6e-260
Identity = 442/442 (100.00%), Postives = 442/442 (100.00%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60
           MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120
           AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD
Sbjct: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120

Query: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA
Sbjct: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180

Query: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240
           GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK
Sbjct: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240

Query: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300
           IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420

Query: 421 RKKAERRKAHSAPGSISTVPLR 443
           RKKAERRKAHSAPGSISTVPLR
Sbjct: 421 RKKAERRKAHSAPGSISTVPLR 442

[Close]

BLAST of Carg18047 vs. NCBI nr
Match: XP_038887278.1 (DDB1- and CUL4-associated factor 13 [Benincasa hispida])

HSP 1 Score: 900.2 bits (2325), Expect = 7.2e-258
Identity = 431/451 (95.57%), Postives = 447/451 (99.11%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60
           MKVKVISRSTDEFTRERSQDLQRVFRNFDP+LRTQEKAVEYVRA+NAAKLD+MFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120
           AMDGH+DAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRT+CQFPGHQGAVRGLT+S+D
Sbjct: 61  AMDGHMDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120

Query: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRILISCGTDCTVRLWN+PIPTLNSYETS NSSEPLAVYVWKNAFWA+DHQWDGNLFATA
Sbjct: 121 GRILISCGTDCTVRLWNVPIPTLNSYETSTNSSEPLAVYVWKNAFWAIDHQWDGNLFATA 180

Query: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240
           GAQL+IWDHNRSQPVSS+EWGTDSVISVRFNPGEPNVLATSASDRSI LYDLRMSSP RK
Sbjct: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240

Query: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300
           +IM+TKTNSICWNPREPMNFTAANEDCNCYSYDSR+LDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 VIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTI+DAE
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIMDAE 420

Query: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 452
           R+K ERRKAHSAPGSISTVPLRRRRIIKEVE
Sbjct: 421 RRKEERRKAHSAPGSISTVPLRRRRIIKEVE 451

[Close]

BLAST of Carg18047 vs. ExPASy Swiss-Prot
Match: Q6PAC3 (DDB1- and CUL4-associated factor 13 OS=Mus musculus OX=10090 GN=Dcaf13 PE=2 SV=2)

HSP 1 Score: 460.7 bits (1184), Expect = 1.9e-128
Identity = 212/451 (47.01%), Postives = 307/451 (68.07%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60
           MKVK++SR+ D + RE   D+QRV RN+DP L   E   EYVRA+NA KL+R+FAKPF+ 
Sbjct: 1   MKVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLA 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120
           ++DGH D V+C+AK+P  L  + SG+ DG++++W++  R+ +     H+G VRG+ +   
Sbjct: 61  SLDGHRDGVNCLAKHPKSLASVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGMCTRFC 120

Query: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           G    + G D TV+ W +  P     E      EPL   + K  +  +DH W   +FAT 
Sbjct: 121 GTSFFTVGDDKTVKQWKMDGPGYGEEE------EPLYTVLGKTVYTGIDHHWKDPVFATC 180

Query: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240
           G Q++IWD  R+ PV S  WG DS+ SV+FNP E  +L + ASDR+I LYD+R ++P++K
Sbjct: 181 GQQVDIWDEQRTSPVCSMNWGFDSISSVKFNPVETFLLGSCASDRNIVLYDMRQATPLKK 240

Query: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300
           +I++ +TN+ICWNP E  NFTAANED N Y++D R LD    VH DHVSAV+D+D+SP+G
Sbjct: 241 VILEMRTNTICWNPMEAFNFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           +EFV+ S+D++IRIFP +   SRE+YHTKRMQ V CV+++ D+ Y++ GSD+ N+RLWKA
Sbjct: 301 KEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVMCVKWTSDSKYIMCGSDEMNIRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420
            ASE+LGVL  REK  ++Y + +K ++++ P VKRI RHRHLPK I+     +R + +A 
Sbjct: 361 NASEKLGVLTSREKAANDYNQKLKEKFQYHPHVKRIARHRHLPKSIYSQIQEQRVMKEAR 420

Query: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 452
           R+K   R+ HS PGS+  V  R++ ++  V+
Sbjct: 421 RRKEMNRRKHSKPGSVPIVSERKKHVVAVVK 445

[Close]

BLAST of Carg18047 vs. ExPASy Swiss-Prot
Match: Q5ZLK1 (DDB1- and CUL4-associated factor 13 OS=Gallus gallus OX=9031 GN=DCAF13 PE=2 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 5.6e-128
Identity = 213/451 (47.23%), Postives = 307/451 (68.07%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60
           M+VKV+SR+ D++ RE   DLQRV RN+DP L   E A EYVRA+NA KL+R+FAKPF+ 
Sbjct: 1   MRVKVLSRNPDDYVRETKLDLQRVPRNYDPALHPFEVAREYVRALNATKLERVFAKPFLS 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120
           ++DGH D V+CMAK+P  L  + SG+ DG++R+W++  R+ +     H+G VRG+ +   
Sbjct: 61  SLDGHRDGVNCMAKHPKSLSTVLSGACDGEVRIWNLTKRQCIRALQAHEGFVRGMCARFC 120

Query: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           G    + G D TV+ W +  P     E      EP+   + K  +  +DH W   +FAT 
Sbjct: 121 GTSFFTVGDDKTVKQWKMESPGYGEEE------EPIHTILGKTVYTGIDHHWKDAVFATC 180

Query: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240
           G Q++IWD  R+ P+ S  WG DS+ SV+FNP E  +L + ASDR+I LYD+R S+P++K
Sbjct: 181 GQQVDIWDEQRTSPMCSLTWGFDSISSVKFNPIETYLLGSCASDRNIVLYDMRQSTPLKK 240

Query: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300
           +I+  +TN++CWNP E   FTAANED N Y++D R L     VH DHVSAV+D+D+SP+G
Sbjct: 241 VILNMRTNTLCWNPMEAFIFTAANEDYNLYTFDMRFLTSPVMVHMDHVSAVLDVDYSPTG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           +EFV+ S+D+++RIFP + GHSRE+YHTKRMQ V  V+++ D+ Y++ GSD+ N+RLWKA
Sbjct: 301 KEFVSASFDKSVRIFPVDKGHSREVYHTKRMQHVITVKWTSDSRYILCGSDEMNIRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420
            ASE+LGVL PREK    Y + +K +++H P++KRI RHRHLPK I+     +R + +A 
Sbjct: 361 NASEKLGVLAPREKAAMNYNQKLKEKFQHHPQIKRIARHRHLPKSIYCQIKEQRIMREAR 420

Query: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 452
           R+K   R+ HS PGS+  V  +++ I+  V+
Sbjct: 421 RRKELNRRKHSKPGSVPVVSEKKKHIVAVVQ 445

[Close]

BLAST of Carg18047 vs. ExPASy Swiss-Prot
Match: Q803X4 (DDB1- and CUL4-associated factor 13 OS=Danio rerio OX=7955 GN=dcaf13 PE=2 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 1.4e-126
Identity = 214/451 (47.45%), Postives = 301/451 (66.74%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60
           MKVKV+ R+ D++ RE ++D+QRV RN+DP L   E   EY RA+NA KL+R+FAKPF+ 
Sbjct: 1   MKVKVLCRNPDDYVRETTRDIQRVPRNYDPTLHPFEVPREYTRALNATKLERVFAKPFVA 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120
           ++DGH D +SC+ K+   L  + SG+ DG++++W++  R        H+G VRG+ S   
Sbjct: 61  SLDGHRDVISCITKHAKSLSTVISGACDGEVKVWNLPKRECTRTVQAHEGFVRGICSRFC 120

Query: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           G    + G D T++ WN+  P     E      EP+   + K  F  +DH      F T 
Sbjct: 121 GTSFFTVGDDKTIKQWNMEAPGYGVRE------EPINTILGKAVFTGIDHHQREGTFVTC 180

Query: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240
           G  ++IWD  RS PV SF WG DS  SVR+NP EP++LA+ ASDRSI LYD R S+P+RK
Sbjct: 181 GQTVDIWDEQRSSPVLSFSWGVDSFSSVRYNPVEPDLLASCASDRSIVLYDTRESAPLRK 240

Query: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300
           +IMQ ++N++CWNP E   FT ANED N Y+YD R LD    VH DHVSAV+D+D+SP+G
Sbjct: 241 VIMQLRSNTLCWNPMEAYYFTCANEDYNLYTYDIRNLDVPVTVHMDHVSAVLDVDYSPTG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFV+ S+D+TIRIFP + GHSRE+YHTKRMQ V CV++S D+ +++SGSD+ N+RLWKA
Sbjct: 301 REFVSASFDKTIRIFPKDKGHSREVYHTKRMQHVICVKWSADSKFIMSGSDEMNIRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420
            ASE+LGVL  REK    Y + +  +++H P+V+RI RHRHLP+ + K     + + +A 
Sbjct: 361 NASEKLGVLSTREKTAANYNKKLIQKFQHHPQVRRIARHRHLPRDVLKQKRELKEMKEAR 420

Query: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 452
           R+K +  + HS PGS+  +  + + ++K VE
Sbjct: 421 RRKEQNVRKHSKPGSVPLLTEKEKHVVKVVE 445

[Close]

BLAST of Carg18047 vs. ExPASy Swiss-Prot
Match: Q9NV06 (DDB1- and CUL4-associated factor 13 OS=Homo sapiens OX=9606 GN=DCAF13 PE=1 SV=2)

HSP 1 Score: 452.6 bits (1163), Expect = 5.2e-126
Identity = 210/451 (46.56%), Postives = 302/451 (66.96%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60
           MKVK++SR+ D + RE   DLQRV RN+DP L   E   EY+RA+NA KL+R+FAKPF+ 
Sbjct: 1   MKVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYIRALNATKLERVFAKPFLA 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120
           ++DGH D V+C+AK+P  L  + SG+ DG++R+W++  R  +     H+G VRG+ +   
Sbjct: 61  SLDGHRDGVNCLAKHPEKLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFC 120

Query: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           G    + G D TV+ W +  P     E      EPL   + K  +  +DH W   +FAT 
Sbjct: 121 GTSFFTVGDDKTVKQWKMDGPGYGDEE------EPLHTILGKTVYTGIDHHWKEAVFATC 180

Query: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240
           G Q++IWD  R+ P+ S  WG DS+ SV+FNP E  +L + ASDR+I LYD+R ++P++K
Sbjct: 181 GQQVDIWDEQRTNPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKK 240

Query: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300
           +I+  +TN+ICWNP E   FTAANED N Y++D R LD    VH DHVSAV+D+D+SP+G
Sbjct: 241 VILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           +EFV+ S+D++IRIFP +   SRE+YHTKRMQ V CV+++ D+ Y++ GSD+ N+RLWKA
Sbjct: 301 KEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420
            ASE+LGVL  REK   +Y + +K +++H P +KRI RHRHLPK I+     +R + +A 
Sbjct: 361 NASEKLGVLTSREKAAKDYNQKLKEKFQHYPHIKRIARHRHLPKSIYSQIQEQRIMKEAR 420

Query: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 452
           R+K   R  HS PGS+  V  +++ ++  V+
Sbjct: 421 RRKEVNRIKHSKPGSVPLVSEKKKHVVAVVK 445

[Close]

BLAST of Carg18047 vs. ExPASy Swiss-Prot
Match: Q5R4T8 (DDB1- and CUL4-associated factor 13 OS=Pongo abelii OX=9601 GN=DCAF13 PE=2 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 5.2e-126
Identity = 211/451 (46.78%), Postives = 302/451 (66.96%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60
           MKVK++SR+ D + RE   DLQRV RN+DP L   E   EYVRA+NA KL+R+FAKPF+ 
Sbjct: 1   MKVKMLSRNPDNYVRETKLDLQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLA 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120
           ++DGH D V+C+AK+P +L  + SG+ DG++R+W++  R  +     H+G VRG+ +   
Sbjct: 61  SLDGHRDGVNCLAKHPKNLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFC 120

Query: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           G    + G D TV+ W +  P     E      EPL   + K  +  +DH W   +FAT 
Sbjct: 121 GTSFFTVGDDKTVKQWKMDGPGYGDEE------EPLHTILGKTVYTGIDHHWKEAVFATC 180

Query: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240
           G Q++IWD  R+ PV S  WG DS+ SV+FNP E  +L + ASDR+I LYD+R ++P++K
Sbjct: 181 GQQVDIWDEQRTNPVCSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKK 240

Query: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300
           +I+  +TN+ICWNP E   FTAANED N Y++D   LD    VH DHVSAV+D+D+SP+G
Sbjct: 241 VILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMSALDTPVMVHMDHVSAVLDVDYSPTG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           +EFV+ S+D++IRIFP +   SRE+YHTKRMQ V CV+++ D+ Y++ GSD+ N+RLWKA
Sbjct: 301 KEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420
            ASE+LGVL  REK   +Y + +K +++H P +KRI RHRHLPK I+     +R + +A 
Sbjct: 361 NASEKLGVLTSREKAAKDYNQKLKEKFQHYPHIKRIARHRHLPKSIYSQIQEQRIMKEAR 420

Query: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 452
           R+K   R  HS PGS+  V  +++ ++  V+
Sbjct: 421 RRKEVNRIKHSKPGSVPIVSEKKKHVVAVVK 445

[Close]

BLAST of Carg18047 vs. ExPASy TrEMBL
Match: A0A6J1JKI5 (DDB1- and CUL4-associated factor 13 OS=Cucurbita maxima OX=3661 GN=LOC111486015 PE=3 SV=1)

HSP 1 Score: 922.5 bits (2383), Expect = 6.6e-265
Identity = 450/451 (99.78%), Postives = 450/451 (99.78%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60
           MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120
           AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD
Sbjct: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120

Query: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA
Sbjct: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180

Query: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240
           GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK
Sbjct: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240

Query: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300
           IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALR TIVDAE
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRHTIVDAE 420

Query: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 452
           RKKAERRKAHSAPGSISTVPLRRRRIIKEVE
Sbjct: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 451

[Close]

BLAST of Carg18047 vs. ExPASy TrEMBL
Match: A0A6J1ERV6 (DDB1- and CUL4-associated factor 13 OS=Cucurbita moschata OX=3662 GN=LOC111437151 PE=3 SV=1)

HSP 1 Score: 918.7 bits (2373), Expect = 9.5e-264
Identity = 449/451 (99.56%), Postives = 450/451 (99.78%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60
           MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120
           AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTV QFPGHQGAVRGLTSSSD
Sbjct: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVFQFPGHQGAVRGLTSSSD 120

Query: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRILISCGTDCTVRLWNIPIP+LNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA
Sbjct: 121 GRILISCGTDCTVRLWNIPIPSLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180

Query: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240
           GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK
Sbjct: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240

Query: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300
           IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420

Query: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 452
           RKKAERRKAHSAPGSISTVPLRRRRIIKEVE
Sbjct: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 451

[Close]

BLAST of Carg18047 vs. ExPASy TrEMBL
Match: A0A6J1HYZ0 (DDB1- and CUL4-associated factor 13 OS=Cucurbita maxima OX=3661 GN=LOC111468188 PE=3 SV=1)

HSP 1 Score: 897.9 bits (2319), Expect = 1.7e-257
Identity = 433/451 (96.01%), Postives = 445/451 (98.67%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60
           MKVKVISRSTDEFTRERSQDLQRVFRNFDP+LRTQEKAVEYVRA+NAAK+DRMFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKMDRMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120
           AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLT+S+D
Sbjct: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTASAD 120

Query: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRIL+SCGTDCTVRLWNIPIPTLNSY TSNNSSEPLAVY WKNAFWAVDHQWDGNLFATA
Sbjct: 121 GRILVSCGTDCTVRLWNIPIPTLNSYVTSNNSSEPLAVYAWKNAFWAVDHQWDGNLFATA 180

Query: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240
           GAQL+IWDHNRSQPVSSFEWGTDSVISVRFNPGEPN+LATSASDRSI LYDLRMSSP RK
Sbjct: 181 GAQLDIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNILATSASDRSIALYDLRMSSPARK 240

Query: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300
           IIM+TKTNSICWNPREPMNFTAANEDCNCYSYDSR+LDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTI+DAE
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIMDAE 420

Query: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 452
           R+K ERRKAHSA GSISTVPLRRRRIIKEVE
Sbjct: 421 RRKEERRKAHSARGSISTVPLRRRRIIKEVE 451

[Close]

BLAST of Carg18047 vs. ExPASy TrEMBL
Match: A0A0A0K1Y9 (DDB1- and CUL4-associated factor 13 OS=Cucumis sativus OX=3659 GN=Csa_7G038680 PE=3 SV=1)

HSP 1 Score: 896.3 bits (2315), Expect = 5.1e-257
Identity = 429/451 (95.12%), Postives = 446/451 (98.89%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60
           MKVKVISRSTDEFTRERS DLQRVFRNFDP+LRTQEKAVEYVRA+NAAKLD+MFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSHDLQRVFRNFDPSLRTQEKAVEYVRAVNAAKLDKMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120
           AMDGH+D+VSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTV QFPGHQGAVRGLT+S+D
Sbjct: 61  AMDGHMDSVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVYQFPGHQGAVRGLTASTD 120

Query: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRILISCGTDCTVRLWN+P+PTLNSYETSNNSSEPLAVYVWKNAFWA+DHQWDGNLFATA
Sbjct: 121 GRILISCGTDCTVRLWNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAIDHQWDGNLFATA 180

Query: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240
           GAQL+IWDHNRSQPVSS+EWGTDSVISVRFNPGEPNVLATSASDRSI LYDLRMSSP RK
Sbjct: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240

Query: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300
           +IM+TKTNSICWNPREPMNFTAANEDCNCYSYDSR+LDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 VIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTI+DAE
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIIDAE 420

Query: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 452
           R+K ERRKAHSAPGSISTVPLRRRRIIKEVE
Sbjct: 421 RRKEERRKAHSAPGSISTVPLRRRRIIKEVE 451

[Close]

BLAST of Carg18047 vs. ExPASy TrEMBL
Match: A0A1S3C170 (DDB1- and CUL4-associated factor 13 OS=Cucumis melo OX=3656 GN=LOC103495648 PE=3 SV=1)

HSP 1 Score: 891.3 bits (2302), Expect = 1.6e-255
Identity = 428/451 (94.90%), Postives = 443/451 (98.23%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60
           MKVKVISRSTDEFTRERS DLQRVFRNFDP+LR QEKAVEYVRA+NAAKLD+MFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSHDLQRVFRNFDPSLRPQEKAVEYVRAVNAAKLDKMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120
           AMDGH+DAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLT+S+D
Sbjct: 61  AMDGHMDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTASTD 120

Query: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRILISCGTDCTVRLWN+P PTLNSYETSNN+SEPLAVYVWKNAFWAVDHQWDGNLFATA
Sbjct: 121 GRILISCGTDCTVRLWNVPFPTLNSYETSNNASEPLAVYVWKNAFWAVDHQWDGNLFATA 180

Query: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240
           GAQL+IWDHNRSQPVSS+EWGTDSVISVRFNPGEPNVLATSASDRSI LYDLRMSSP RK
Sbjct: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240

Query: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300
           +IM+TKTNSICWNPREPMNFTAANEDCNCYSYDSR+LDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 VIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFS DASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSSDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDAE 420
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTI+DAE
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIMDAE 420

Query: 421 RKKAERRKAHSAPGSISTVPLRRRRIIKEVE 452
           R+K ERRKAHS PGSISTVPLRRRRIIKEVE
Sbjct: 421 RRKEERRKAHSTPGSISTVPLRRRRIIKEVE 451

[Close]

BLAST of Carg18047 vs. TAIR 10
Match: AT4G28450.1 (nucleotide binding;protein binding )

HSP 1 Score: 766.9 bits (1979), Expect = 8.9e-222
Identity = 360/452 (79.65%), Postives = 413/452 (91.37%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60
           MK+K +SRS DE+TRERSQDLQRVF NFDP+LR  EKAVEY RA+ AAKL+++FA+PF+G
Sbjct: 1   MKIKTLSRSVDEYTRERSQDLQRVFHNFDPSLRPMEKAVEYQRALTAAKLEKIFARPFVG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120
           AMDGH D VSCMAKNPN+LKGIFS SMDGDIRLWDI++RRTVCQFPGHQGAVRGLT+S+D
Sbjct: 61  AMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTD 120

Query: 121 GRILISCGTDCTVRLWNIPIPTL-NSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFAT 180
           G +L+SCGTDCTVRLWN+P P+L +S  +S N  EP A YVWKNAFWAVDHQ++G+LFAT
Sbjct: 121 GNVLVSCGTDCTVRLWNVPRPSLEDSSISSENFIEPSATYVWKNAFWAVDHQFEGDLFAT 180

Query: 181 AGAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVR 240
           AGAQL+IW+HNRSQPV SF+WGTDSVISVRFNPGEPN+LATSASDRSIT+YDLR+SS  R
Sbjct: 181 AGAQLDIWNHNRSQPVQSFQWGTDSVISVRFNPGEPNLLATSASDRSITIYDLRLSSAAR 240

Query: 241 KIIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPS 300
           KIIM TKTNSI WNP EPMN TAANED +CYS+D R+LDEAKCVH+DHVSAVMDIDFSP+
Sbjct: 241 KIIMMTKTNSIAWNPMEPMNLTAANEDGSCYSFDGRKLDEAKCVHKDHVSAVMDIDFSPT 300

Query: 301 GREFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWK 360
           GREFVTGSYDR++RIFPYNGGHSREIYHTKRMQRVFCV++SCDA+YVISGSDDTNLRLWK
Sbjct: 301 GREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDATYVISGSDDTNLRLWK 360

Query: 361 AKASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIVDA 420
           AKASEQLGV+LPRE++KHEY EAVKNRYKHL EVKRIVRHRHLPKPI+KA  + RT+ D+
Sbjct: 361 AKASEQLGVILPREQKKHEYNEAVKNRYKHLSEVKRIVRHRHLPKPIYKAMGIIRTVNDS 420

Query: 421 ERKKAERRKAHSAPGSISTVPLRRRRIIKEVE 452
           +R+K  RRKAHSAPG++ T PLR+R+IIKEVE
Sbjct: 421 KRRKEARRKAHSAPGTVVTAPLRKRKIIKEVE 452

[Close]

BLAST of Carg18047 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 4.7e-13
Identity = 60/265 (22.64%), Postives = 118/265 (44.53%), Query Frame = 0


Query: 108 HQGAVRGLTSSSDGRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYV-WKNAFW 167
           H  AV  +  SSDGR+L S   D T+R +   I T+N     +  +EP+  +   +N   
Sbjct: 23  HNRAVSSVKFSSDGRLLASASADKTIRTYT--INTIN-----DPIAEPVQEFTGHENGIS 82

Query: 168 AVDHQWDGNLFATAG--AQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASD 227
            V    D     +A     L +WD      + +    T+    V FNP + N++ + + D
Sbjct: 83  DVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP-QSNMIVSGSFD 142

Query: 228 RSITLYDLRMSSPVRKIIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVH 287
            ++ ++D+     ++ +   +   +     R+     +++ D  C  +DS      K + 
Sbjct: 143 ETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 202

Query: 288 RDHVSAVMDIDFSPSGREFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCV--RFS-C 347
            D    V  + FSP+G+  + G+ D T+R++  +     + Y T  +   +C+   FS  
Sbjct: 203 DDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTY-TGHVNAQYCISSAFSVT 262

Query: 348 DASYVISGSDDTNLRLWKAKASEQL 367
           +   ++SGS+D  + +W+  + + L
Sbjct: 263 NGKRIVSGSEDNCVHMWELNSKKLL 278

[Close]

BLAST of Carg18047 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 1.0e-12
Identity = 50/200 (25.00%), Postives = 98/200 (49.00%), Query Frame = 0


Query: 173 DGNLFATAGAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDL 232
           + N    AG   N+  +   + + + E  T ++  V+F+  + N+LA+++ D+++ L+  
Sbjct: 14  NANSTGNAGTSGNVPIYKPYRHLKTLEGHTAAISCVKFS-NDGNLLASASVDKTMILWSA 73

Query: 233 RMSSPVRKIIMQTK-TNSICWNPREPMNFT-AANEDCNCYSYDSRRLDEAKCVHRDHVSA 292
              S + +    +   + + W+     ++T +A++DC    +D+R   E   V R H + 
Sbjct: 74  TNYSLIHRYEGHSSGISDLAWS--SDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNF 133

Query: 293 VMDIDFSPSGREFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGS 352
           V  ++F+P     V+GS+D TIRI+    G    +     M  +  V F+ D S ++S S
Sbjct: 134 VFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMP-ISSVHFNRDGSLIVSAS 193

Query: 353 DDTNLRLWKAKASEQLGVLL 371
            D + ++W AK    L  L+
Sbjct: 194 HDGSCKIWDAKEGTCLKTLI 209

[Close]

BLAST of Carg18047 vs. TAIR 10
Match: AT5G54520.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 1.4e-12
Identity = 58/276 (21.01%), Postives = 120/276 (43.48%), Query Frame = 0


Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDI--ANRRTVCQFPGHQGAVRGLTSS 120
           ++ GH  AV+ +  + +H+  + S  +DG + +W++   +++ V  F  H   V+ +  S
Sbjct: 155 SLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWS 214

Query: 121 SDGRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFA 180
             G  L+SCG DCT RL+++        ET +   + +   V         H  + N+F 
Sbjct: 215 KQGLSLLSCGYDCTSRLFDVE----RGVETQSFKEDEVVGVV-------KFHPDNCNVFL 274

Query: 181 TAGAQ--LNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATS------ASDRSITLY 240
           + G++  L +WD   ++ V  +      ++ V F  G    +++S       S+ ++ ++
Sbjct: 275 SGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVW 334

Query: 241 DLRMSSPVRKIIMQTKTNSIC--WNPREPM-------NFTAANEDCNCYSYDSRRLDEAK 300
           D+    P+   +        C   +P++P+       N+TA       +  +  +  E  
Sbjct: 335 DISREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKLNKYKRFEGH 394

Query: 301 CVHRDHVSAVMDIDFSPSGREFVTGSYDRTIRIFPY 318
            V        +  +FSP G    +GS D ++ ++ Y
Sbjct: 395 WV----AGFPIKCNFSPDGETLASGSSDGSVYMYDY 415

[Close]

BLAST of Carg18047 vs. TAIR 10
Match: AT5G25150.1 (TBP-associated factor 5 )

HSP 1 Score: 69.3 bits (168), Expect = 8.9e-12
Identity = 41/140 (29.29%), Postives = 64/140 (45.71%), Query Frame = 0


Query: 62  MDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSDG 121
           M GHL  V C+  +PN    I +GS D  +RLWD+     V  F GH+  V  L  S DG
Sbjct: 498 MAGHLSDVDCVQWHPN-CNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDG 557

Query: 122 RILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATAG 181
           R + S   D T+ +W++      +    +NS             W++ +  +G+L A+  
Sbjct: 558 RYMASGDEDGTIMMWDLSTARCITPLMGHNS-----------CVWSLSYSGEGSLLASGS 617

Query: 182 AQ--LNIWDHNRSQPVSSFE 200
           A   + +WD   S  ++  E
Sbjct: 618 ADCTVKLWDVTSSTKLTKAE 625

The following BLAST results are available for this feature:

BLAST of Carg18047 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529241.1	3.6e-265	100.00	DDB1- and CUL4-associated factor 13-like [Cucurbita pepo subsp. pepo] >KAG702283...	[more]
XP_022988775.1	1.4e-264	99.78	DDB1- and CUL4-associated factor 13-like [Cucurbita maxima]	[more]
XP_022930776.1	2.0e-263	99.56	DDB1- and CUL4-associated factor 13-like [Cucurbita moschata]	[more]
KAG6589135.1	1.6e-260	100.00	DDB1- and CUL4-associated factor 13, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_038887278.1	7.2e-258	95.57	DDB1- and CUL4-associated factor 13 [Benincasa hispida]	[more]

BLAST of Carg18047 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6PAC3	1.9e-128	47.01	DDB1- and CUL4-associated factor 13 OS=Mus musculus OX=10090 GN=Dcaf13 PE=2 SV=2	[more]
Q5ZLK1	5.6e-128	47.23	DDB1- and CUL4-associated factor 13 OS=Gallus gallus OX=9031 GN=DCAF13 PE=2 SV=1	[more]
Q803X4	1.4e-126	47.45	DDB1- and CUL4-associated factor 13 OS=Danio rerio OX=7955 GN=dcaf13 PE=2 SV=1	[more]
Q9NV06	5.2e-126	46.56	DDB1- and CUL4-associated factor 13 OS=Homo sapiens OX=9606 GN=DCAF13 PE=1 SV=2	[more]
Q5R4T8	5.2e-126	46.78	DDB1- and CUL4-associated factor 13 OS=Pongo abelii OX=9601 GN=DCAF13 PE=2 SV=1	[more]

BLAST of Carg18047 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JKI5	6.6e-265	99.78	DDB1- and CUL4-associated factor 13 OS=Cucurbita maxima OX=3661 GN=LOC111486015 ...	[more]
A0A6J1ERV6	9.5e-264	99.56	DDB1- and CUL4-associated factor 13 OS=Cucurbita moschata OX=3662 GN=LOC11143715...	[more]
A0A6J1HYZ0	1.7e-257	96.01	DDB1- and CUL4-associated factor 13 OS=Cucurbita maxima OX=3661 GN=LOC111468188 ...	[more]
A0A0A0K1Y9	5.1e-257	95.12	DDB1- and CUL4-associated factor 13 OS=Cucumis sativus OX=3659 GN=Csa_7G038680 P...	[more]
A0A1S3C170	1.6e-255	94.90	DDB1- and CUL4-associated factor 13 OS=Cucumis melo OX=3656 GN=LOC103495648 PE=3...	[more]

BLAST of Carg18047 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28450.1	8.9e-222	79.65	nucleotide binding;protein binding	[more]
AT3G49660.1	4.7e-13	22.64	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G02730.1	1.0e-12	25.00	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G54520.1	1.4e-12	21.01	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G25150.1	8.9e-12	29.29	TBP-associated factor 5	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 124..138 score: 35.58 coord: 346..360 score: 33.62 coord: 82..96 score: 40.18
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 191..231 e-value: 2.2E-4 score: 30.6 coord: 318..359 e-value: 0.0011 score: 28.2 coord: 152..188 e-value: 29.0 score: 7.8 coord: 55..95 e-value: 4.9E-5 score: 32.7 coord: 234..273 e-value: 110.0 score: 4.2 coord: 98..137 e-value: 6.6E-9 score: 45.6 coord: 277..316 e-value: 2.1E-5 score: 33.9
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 62..95 e-value: 0.0012 score: 19.6 coord: 282..315 e-value: 9.0E-5 score: 23.2 coord: 102..137 e-value: 9.8E-7 score: 29.4 coord: 327..359 e-value: 1.2E-4 score: 22.8
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 105..138 score: 13.081652
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 284..315 score: 11.009724
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 198..240 score: 8.703868
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 62..104 score: 12.814306
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 327..368 score: 10.675542
IPR007287	Sof1-like protein	PFAM	PF04158	Sof1	coord: 360..446 e-value: 5.6E-29 score: 100.2
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 44..142 e-value: 1.6E-22 score: 82.1
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 143..429 e-value: 4.7E-37 score: 129.6
None	No IPR available	PANTHER	PTHR22851	U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEIN	coord: 1..451
None	No IPR available	PANTHER	PTHR22851:SF2	NUCLEOTIDE BINDING	coord: 1..451
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 62..96 score: 10.15287
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 105..138 score: 10.864685
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 284..315 score: 9.230148
None	No IPR available	CDD	cd00200	WD40	coord: 59..359 e-value: 1.10377E-46 score: 160.964
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 124..138
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 82..96
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 55..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18047-RA	Carg18047-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0005515	protein binding