Carg18041 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg18041
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	fasciclin-like arabinogalactan protein 13
Location	Carg_Chr11: 12011582 .. 12012593 (-)
RNA-Seq Expression	Carg18041
Synteny	Carg18041

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCCATTAAATCCAGCTCACATCCAACCCCACTTTCACCTCCCCCACTCCCCCATCTCCCTTATAAAATCATCATTCCTCCTCCACTAACTCCACCGTCGCCGCCGCCGCCGCCTCCGCCATGGCCTCCACCGCTCTCCTCCTCCTCCTCCTCCTCCCCTTCCTTCTCTTCTCTGTTACCACTCTGGCCCAAACCCCGGCCGCTCCCGCTCCTTCCTCGCCGGGGCCACTCAACATTACCGGCATTCTCGAAAAGGGCGGCCAATTCACGACGTTCATCCGCCTCCTCAACGAAACCAAAATCAACATCCAGCTCGACAATCAGCTCAACAACACTCCTCAGGGGATGACCATTCTTGCCCCCACTGATAATGCCTTCAATTCCCTTAAGCCAGGCGCCCTCAATGGCCTCAACGACCAGGAAAAGACCCAATTATTGCTTTACCATGTCTTGACTAAGGTAATTTCATCTTCAATTCCCCAATTTTAAGGAACAATATTTATTGGGTTTTTGTTGTTTTTTTATTTCAATTTGGTTTCGATCCAGTTCTACACCTTGACGGACCTCCAGACCGTCAGTAACCCAGTCAGGACACTCGCCGGAGACTGGGGGTTGAACTTCACCGGCCAAGCAAACCAAGTCAACGTGTCCACCGGCGTCGTCATGGTGGCCGTCAACAACAAGCTAAGAGAGCAGTCTCCGTTGTCTATTTACGCAGTGGAGCAAGTTTTGTTGCCGGAGGCTCTGTTCGGCGACCACCCTGCTGCCCCTCCACCGAAAGCTTCGGGTCCGGCAAGTGAAAAATCGCCGGCCGATGGCGAAACACCGCCGAAATCTGATGCTGCCCACTCGCCGGCGGATCATAAGGATGCGGCTCCGAGAAACGGCGTCGGTTTGGGATTGGTTTTGGGATTTGGTTTGATTGCCTTTAGTGTTCTTTCTTGAGATGTGACGTTGAATTGTGTGTGCTTTGTCTACTCATATATGCATTGATTTTTTTTTTTTTTTTTTT

mRNA sequence

CGCCATTAAATCCAGCTCACATCCAACCCCACTTTCACCTCCCCCACTCCCCCATCTCCCTTATAAAATCATCATTCCTCCTCCACTAACTCCACCGTCGCCGCCGCCGCCGCCTCCGCCATGGCCTCCACCGCTCTCCTCCTCCTCCTCCTCCTCCCCTTCCTTCTCTTCTCTGTTACCACTCTGGCCCAAACCCCGGCCGCTCCCGCTCCTTCCTCGCCGGGGCCACTCAACATTACCGGCATTCTCGAAAAGGGCGGCCAATTCACGACGTTCATCCGCCTCCTCAACGAAACCAAAATCAACATCCAGCTCGACAATCAGCTCAACAACACTCCTCAGGGGATGACCATTCTTGCCCCCACTGATAATGCCTTCAATTCCCTTAAGCCAGGCGCCCTCAATGGCCTCAACGACCAGGAAAAGACCCAATTATTGCTTTACCATGTCTTGACTAAGTTCTACACCTTGACGGACCTCCAGACCGTCAGTAACCCAGTCAGGACACTCGCCGGAGACTGGGGGTTGAACTTCACCGGCCAAGCAAACCAAGTCAACGTGTCCACCGGCGTCGTCATGGTGGCCGTCAACAACAAGCTAAGAGAGCAGTCTCCGTTGTCTATTTACGCAGTGGAGCAAGTTTTGTTGCCGGAGGCTCTGTTCGGCGACCACCCTGCTGCCCCTCCACCGAAAGCTTCGGGTCCGGCAAGTGAAAAATCGCCGGCCGATGGCGAAACACCGCCGAAATCTGATGCTGCCCACTCGCCGGCGGATCATAAGGATGCGGCTCCGAGAAACGGCGTCGGTTTGGGATTGGTTTTGGGATTTGGTTTGATTGCCTTTAGTGTTCTTTCTTGAGATGTGACGTTGAATTGTGTGTGCTTTGTCTACTCATATATGCATTGATTTTTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGGCCTCCACCGCTCTCCTCCTCCTCCTCCTCCTCCCCTTCCTTCTCTTCTCTGTTACCACTCTGGCCCAAACCCCGGCCGCTCCCGCTCCTTCCTCGCCGGGGCCACTCAACATTACCGGCATTCTCGAAAAGGGCGGCCAATTCACGACGTTCATCCGCCTCCTCAACGAAACCAAAATCAACATCCAGCTCGACAATCAGCTCAACAACACTCCTCAGGGGATGACCATTCTTGCCCCCACTGATAATGCCTTCAATTCCCTTAAGCCAGGCGCCCTCAATGGCCTCAACGACCAGGAAAAGACCCAATTATTGCTTTACCATGTCTTGACTAAGTTCTACACCTTGACGGACCTCCAGACCGTCAGTAACCCAGTCAGGACACTCGCCGGAGACTGGGGGTTGAACTTCACCGGCCAAGCAAACCAAGTCAACGTGTCCACCGGCGTCGTCATGGTGGCCGTCAACAACAAGCTAAGAGAGCAGTCTCCGTTGTCTATTTACGCAGTGGAGCAAGTTTTGTTGCCGGAGGCTCTGTTCGGCGACCACCCTGCTGCCCCTCCACCGAAAGCTTCGGGTCCGGCAAGTGAAAAATCGCCGGCCGATGGCGAAACACCGCCGAAATCTGATGCTGCCCACTCGCCGGCGGATCATAAGGATGCGGCTCCGAGAAACGGCGTCGGTTTGGGATTGGTTTTGGGATTTGGTTTGATTGCCTTTAGTGTTCTTTCTTGA

Protein sequence

MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKINIQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEALFGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIAFSVLS

Homology

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BLAST of Carg18041 vs. NCBI nr
Match: KAG7022841.1 (Fasciclin-like arabinogalactan protein 6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 466.8 bits (1200), Expect = 1.1e-127
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60
           MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK
Sbjct: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60

Query: 61  INIQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120
           INIQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL
Sbjct: 61  INIQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120

Query: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEAL 180
           QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEAL
Sbjct: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEAL 180

Query: 181 FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA 240
           FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA
Sbjct: 181 FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA 240

Query: 241 FSVLS 246
           FSVLS
Sbjct: 241 FSVLS 245

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BLAST of Carg18041 vs. NCBI nr
Match: XP_022930821.1 (fasciclin-like arabinogalactan protein 13 [Cucurbita moschata] >KAG6589141.1 Fasciclin-like arabinogalactan protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 464.9 bits (1195), Expect = 4.2e-127
Identity = 244/245 (99.59%), Postives = 244/245 (99.59%), Query Frame = 0


Query: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60
           MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK
Sbjct: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60

Query: 61  INIQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120
           IN QLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL
Sbjct: 61  INTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120

Query: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEAL 180
           QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEAL
Sbjct: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEAL 180

Query: 181 FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA 240
           FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA
Sbjct: 181 FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA 240

Query: 241 FSVLS 246
           FSVLS
Sbjct: 241 FSVLS 245

[Close]

BLAST of Carg18041 vs. NCBI nr
Match: XP_023530327.1 (fasciclin-like arabinogalactan protein 13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 453.8 bits (1166), Expect = 9.7e-124
Identity = 240/244 (98.36%), Postives = 241/244 (98.77%), Query Frame = 0


Query: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60
           MASTA LLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK
Sbjct: 1   MASTA-LLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60

Query: 61  INIQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120
           IN QLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL
Sbjct: 61  INTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120

Query: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEAL 180
           QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVE+VLLPEAL
Sbjct: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEKVLLPEAL 180

Query: 181 FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA 240
           FGDHPAAPPPKASGPASEKSPAD ETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA
Sbjct: 181 FGDHPAAPPPKASGPASEKSPADSETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA 240

Query: 241 FSVL 245
           FSVL
Sbjct: 241 FSVL 243

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BLAST of Carg18041 vs. NCBI nr
Match: XP_022988922.1 (fasciclin-like arabinogalactan protein 13 [Cucurbita maxima])

HSP 1 Score: 451.4 bits (1160), Expect = 4.8e-123
Identity = 239/245 (97.55%), Postives = 240/245 (97.96%), Query Frame = 0


Query: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60
           MASTA  LLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTT IRLLNETK
Sbjct: 1   MASTA--LLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTLIRLLNETK 60

Query: 61  INIQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120
           IN QLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL
Sbjct: 61  INTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120

Query: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEAL 180
           QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNK+REQSPLSIYAVEQVLLPEAL
Sbjct: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKVREQSPLSIYAVEQVLLPEAL 180

Query: 181 FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA 240
           FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGL LVLGFGLIA
Sbjct: 181 FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLELVLGFGLIA 240

Query: 241 FSVLS 246
           FSVLS
Sbjct: 241 FSVLS 243

[Close]

BLAST of Carg18041 vs. NCBI nr
Match: XP_008455488.1 (PREDICTED: fasciclin-like arabinogalactan protein 6 [Cucumis melo])

HSP 1 Score: 349.4 bits (895), Expect = 2.6e-92
Identity = 186/248 (75.00%), Postives = 216/248 (87.10%), Query Frame = 0


Query: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60
           MAS ALLLLLLLPF LFS  TLAQTPAAPAPS PGP+N+TGIL +GGQF+TFIRLLN+++
Sbjct: 1   MASPALLLLLLLPFALFS-QTLAQTPAAPAPSPPGPINLTGILSQGGQFSTFIRLLNQSR 60

Query: 61  INIQLDNQLNNTP-QGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTD 120
           + IQLDNQLNN+  +G+TILAPTDN FN+L+ GALN L+DQ+K+QLLLYHVL KFYTLT+
Sbjct: 61  LIIQLDNQLNNSQGEGLTILAPTDNGFNALESGALNSLDDQQKSQLLLYHVLPKFYTLTE 120

Query: 121 LQTVSNPVRTLAGDWGLNFTGQA--NQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLP 180
           LQT+SNPVRT AGDWGLNFTGQA  NQVNVSTGVV V +NNKLREQSPLS++ V++VLLP
Sbjct: 121 LQTISNPVRTQAGDWGLNFTGQANSNQVNVSTGVVTVPINNKLREQSPLSVFVVDKVLLP 180

Query: 181 EALFGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFG 240
           EALFG+H AAPPPKA  P ++K+P DGETPPKSDAA  PA+ K AA RNGVGLGL+L FG
Sbjct: 181 EALFGNHTAAPPPKAPAPGADKAPVDGETPPKSDAAKPPANDKGAAARNGVGLGLILSFG 240

Query: 241 LIAFSVLS 246
           LI  SV+S
Sbjct: 241 LIVISVVS 247

[Close]

BLAST of Carg18041 vs. ExPASy Swiss-Prot
Match: Q9FFH6 (Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA13 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.4e-53
Identity = 128/246 (52.03%), Postives = 164/246 (66.67%), Query Frame = 0


Query: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60
           MA+T LLLLLL    +F  T +    AAPAP   GP+NIT ILEKGGQF T IRLLN T+
Sbjct: 1   MATTPLLLLLLT--AVFLSTEITAQRAAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQ 60

Query: 61  INIQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120
           I  Q++ Q+N++ +GMT+LAPTDNAF +LKPG LN L+  ++ +L+LYHV  KFYTL DL
Sbjct: 61  IGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDL 120

Query: 121 QTVSNPVRTLA------GDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQV 180
            +VSNPVRT A      G +GLNFTGQ NQVNVSTGVV   ++  LR++ PL++Y V+ V
Sbjct: 121 LSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMV 180

Query: 181 LLPEALFGDH---PAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRN---GV 235
           LLPE +FG+    P APPPK+  P      +D     K  AA S ++   +   N   G+
Sbjct: 181 LLPEEMFGERKISPMAPPPKSKSP----DVSDDSESSKKAAAPSESEKSGSGEMNTGLGL 240

[Close]

BLAST of Carg18041 vs. ExPASy Swiss-Prot
Match: Q9ZWA8 (Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 6.7e-51
Identity = 124/254 (48.82%), Postives = 166/254 (65.35%), Query Frame = 0


Query: 1   MASTALLL--LLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNE 60
           MA+T L L  LLL+  +L +    AQ PAAPAP   GP+N+T ILEKGGQFTTFI LLN 
Sbjct: 1   MATTRLTLAPLLLIAAVLLATKATAQ-PAAPAPEPAGPINLTAILEKGGQFTTFIHLLNI 60

Query: 61  TKINIQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLT 120
           T++  Q++ Q+N++ +GMT+ APTDNAF +LKPG LN L+  ++ +L+LYHV  K+Y++ 
Sbjct: 61  TQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMD 120

Query: 121 DLQTVSNPVRTLA-----GDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQ 180
           DL +VSNPVRT A     G +GLNFTGQ NQ+NVSTG V   ++N LR+Q PL++Y V+ 
Sbjct: 121 DLLSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDM 180

Query: 181 VLLPEALFGDH---PAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGL 240
           VLLP  +FG+H   P AP PK+      KS    +    +  A SP+D K  +    VGL
Sbjct: 181 VLLPGEMFGEHKLSPIAPAPKS------KSGGVTDDSGSTKKAASPSD-KSGSGEKKVGL 240

Query: 241 GLVLGFGLIAFSVL 245
           G  LG  ++    L
Sbjct: 241 GFGLGLIVLCLKFL 246

[Close]

BLAST of Carg18041 vs. ExPASy Swiss-Prot
Match: Q9SIL7 (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6 PE=2 SV=2)

HSP 1 Score: 199.1 bits (505), Expect = 5.7e-50
Identity = 122/251 (48.61%), Postives = 160/251 (63.75%), Query Frame = 0


Query: 3   STALLLLLLLPFLLFSVTTLAQTPAAPAPSS-PGPLNITGILEKGGQFTTFIRLLNETKI 62
           S++L   ++L   LF++  +   P APAP++   P+N+T ILE G QFTT I+LLN T++
Sbjct: 2   SSSLFSYVVLLIFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQV 61

Query: 63  NIQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQ 122
             Q+  QLN++ QGMTI APTDNAFN LKPG LN L  Q++ QL+LYH++ K+Y+L+DL 
Sbjct: 62  GFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLL 121

Query: 123 TVSNPVRTLA-----GDWGLNFTGQA--NQVNVSTGVVMVAVNNKLREQSPLSIYAVEQV 182
             SNPVRT A     G +GLNFTGQA  NQVNVSTGVV   +NN LR+Q PL++Y V+ V
Sbjct: 122 LASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSV 181

Query: 183 LLPEALFGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPR-NGVGLGLV 242
           LLPE LFG      P  A  P S  S +D ++P   D      +HK A        LG+V
Sbjct: 182 LLPEELFG--TKTTPTGAPAPKSSTSSSDADSPAADD------EHKSAGSSVKRTSLGIV 241

Query: 243 LGFGLIAFSVL 245
           + F L   SV+
Sbjct: 242 VSFALFCCSVI 244

[Close]

BLAST of Carg18041 vs. ExPASy Swiss-Prot
Match: Q8LEJ6 (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA11 PE=2 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 3.3e-42
Identity = 110/229 (48.03%), Postives = 136/229 (59.39%), Query Frame = 0


Query: 11  LLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKINIQLDNQLN 70
           L  F L   TT  Q   APAP   GP NIT ILEK GQFT FIRLL  T+ + Q++ QLN
Sbjct: 12  LFIFFLVIATTYGQ---APAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLN 71

Query: 71  -NTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQTVSNPVRT 130
            ++  G+T+ APTDNAFNSLK G LN L+DQ+K QL+ +HVL    T+   QTVSNP+RT
Sbjct: 72  SSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRT 131

Query: 131 LAGD-----WGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEALFGDH 190
            AGD     + LN T   NQVN++TGVV   V N +     L++Y V+QVLLP A+FG  
Sbjct: 132 QAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGSS 191

Query: 191 PA-APPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGL 233
            A AP P+  G  S+ S + G      D      D  D A R G G G+
Sbjct: 192 VAPAPAPEKGGSVSKGSASGG------DDGGDSTDSSD-AERTGFGFGI 230

[Close]

BLAST of Carg18041 vs. ExPASy Swiss-Prot
Match: Q8LEE9 (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA12 PE=2 SV=2)

HSP 1 Score: 156.8 bits (395), Expect = 3.2e-37
Identity = 94/220 (42.73%), Postives = 133/220 (60.45%), Query Frame = 0


Query: 7   LLLLLLPFLLFSVTT---LAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKINI 66
           L++LL   LL   TT   L+Q   A AP+ PGP N+T ILEK GQFT FIRLL  T +  
Sbjct: 5   LIILLFTVLLLLTTTPGILSQPSPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVAN 64

Query: 67  QLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQTV 126
           QL  QLNN+  G+TI AP+D++F  LK G LN L D+++ +L+ +HV+  + + ++ QT+
Sbjct: 65  QLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTI 124

Query: 127 SNPVRTLAGD-----WGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPE 186
           SNP+RT AGD     + LN T   N VN+++GV    V+  +     L++Y V++VLLP+
Sbjct: 125 SNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQ 184

Query: 187 ALFGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPAD 219
            +F   P AP P  S   S+K   D +    S +  SPAD
Sbjct: 185 QVFDPRPPAPAPAPSVSKSKKKKDDSD----SSSDDSPAD 220

[Close]

BLAST of Carg18041 vs. ExPASy TrEMBL
Match: A0A6J1ES00 (fasciclin-like arabinogalactan protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111437189 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.0e-127
Identity = 244/245 (99.59%), Postives = 244/245 (99.59%), Query Frame = 0


Query: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60
           MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK
Sbjct: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60

Query: 61  INIQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120
           IN QLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL
Sbjct: 61  INTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120

Query: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEAL 180
           QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEAL
Sbjct: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEAL 180

Query: 181 FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA 240
           FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA
Sbjct: 181 FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA 240

Query: 241 FSVLS 246
           FSVLS
Sbjct: 241 FSVLS 245

[Close]

BLAST of Carg18041 vs. ExPASy TrEMBL
Match: A0A6J1JED4 (fasciclin-like arabinogalactan protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111486132 PE=3 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.3e-123
Identity = 239/245 (97.55%), Postives = 240/245 (97.96%), Query Frame = 0


Query: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60
           MASTA  LLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTT IRLLNETK
Sbjct: 1   MASTA--LLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTLIRLLNETK 60

Query: 61  INIQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120
           IN QLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL
Sbjct: 61  INTQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120

Query: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEAL 180
           QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNK+REQSPLSIYAVEQVLLPEAL
Sbjct: 121 QTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKVREQSPLSIYAVEQVLLPEAL 180

Query: 181 FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLIA 240
           FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGL LVLGFGLIA
Sbjct: 181 FGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLELVLGFGLIA 240

Query: 241 FSVLS 246
           FSVLS
Sbjct: 241 FSVLS 243

[Close]

BLAST of Carg18041 vs. ExPASy TrEMBL
Match: A0A1S3C1R5 (fasciclin-like arabinogalactan protein 6 OS=Cucumis melo OX=3656 GN=LOC103495639 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.3e-92
Identity = 186/248 (75.00%), Postives = 216/248 (87.10%), Query Frame = 0


Query: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60
           MAS ALLLLLLLPF LFS  TLAQTPAAPAPS PGP+N+TGIL +GGQF+TFIRLLN+++
Sbjct: 1   MASPALLLLLLLPFALFS-QTLAQTPAAPAPSPPGPINLTGILSQGGQFSTFIRLLNQSR 60

Query: 61  INIQLDNQLNNTP-QGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTD 120
           + IQLDNQLNN+  +G+TILAPTDN FN+L+ GALN L+DQ+K+QLLLYHVL KFYTLT+
Sbjct: 61  LIIQLDNQLNNSQGEGLTILAPTDNGFNALESGALNSLDDQQKSQLLLYHVLPKFYTLTE 120

Query: 121 LQTVSNPVRTLAGDWGLNFTGQA--NQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLP 180
           LQT+SNPVRT AGDWGLNFTGQA  NQVNVSTGVV V +NNKLREQSPLS++ V++VLLP
Sbjct: 121 LQTISNPVRTQAGDWGLNFTGQANSNQVNVSTGVVTVPINNKLREQSPLSVFVVDKVLLP 180

Query: 181 EALFGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFG 240
           EALFG+H AAPPPKA  P ++K+P DGETPPKSDAA  PA+ K AA RNGVGLGL+L FG
Sbjct: 181 EALFGNHTAAPPPKAPAPGADKAPVDGETPPKSDAAKPPANDKGAAARNGVGLGLILSFG 240

Query: 241 LIAFSVLS 246
           LI  SV+S
Sbjct: 241 LIVISVVS 247

[Close]

BLAST of Carg18041 vs. ExPASy TrEMBL
Match: A0A6J1C293 (fasciclin-like arabinogalactan protein 13 OS=Momordica charantia OX=3673 GN=LOC111007613 PE=3 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 4.5e-90
Identity = 185/247 (74.90%), Postives = 207/247 (83.81%), Query Frame = 0


Query: 1   MASTALLLLLLLP-FLLFSVTTLAQ-TPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNE 60
           MAS A  +LLLLP FLLFS TT+AQ +PAAPAPS  GP+NIT +L +GGQFTT IRLLNE
Sbjct: 1   MASAAATVLLLLPLFLLFSQTTVAQPSPAAPAPSPAGPINITAVLAQGGQFTTLIRLLNE 60

Query: 61  TKINIQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLT 120
           +K+  QL+NQLNNTPQGMTILAPTDNAFN+LKPGALNGLNDQ+KTQLLLYHVLT+FYT T
Sbjct: 61  SKLITQLENQLNNTPQGMTILAPTDNAFNNLKPGALNGLNDQQKTQLLLYHVLTQFYTST 120

Query: 121 DLQTVSNPVRTLAGDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPE 180
           +L TVSNPVRTLAGDWGLNFTGQ NQVNVSTGVV V +NNKLREQSPLS++ V+QVLLPE
Sbjct: 121 ELLTVSNPVRTLAGDWGLNFTGQGNQVNVSTGVVTVPINNKLREQSPLSVFEVDQVLLPE 180

Query: 181 ALFGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGL 240
           ALFG+  AAP PKA  P ++K+PADGE  PKSDAA  P+  K AA RNGVGLG V GF  
Sbjct: 181 ALFGNKTAAPAPKAPAPGADKAPADGEPQPKSDAAKPPSGDKGAAVRNGVGLGFVSGFVF 240

Query: 241 IAFSVLS 246
           I  SV S
Sbjct: 241 IVISVFS 247

[Close]

BLAST of Carg18041 vs. ExPASy TrEMBL
Match: A0A0A0K1Z9 (FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G039260 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 7.9e-87
Identity = 177/246 (71.95%), Postives = 207/246 (84.15%), Query Frame = 0


Query: 3   STALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKIN 62
           ++A LLLLLLPF LF   TLAQTPAAP PS PGP+N+TGIL +GGQF+TFIRLLNE+++ 
Sbjct: 2   ASAALLLLLLPFALF-CQTLAQTPAAPGPSPPGPINLTGILSEGGQFSTFIRLLNESRLI 61

Query: 63  IQLDNQLNNTP-QGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQ 122
            QLDNQLNN+   G+TILAPTDN FNSL+PGALN L+DQ+K+QLLLYHVL KFYTL +LQ
Sbjct: 62  TQLDNQLNNSQGGGLTILAPTDNGFNSLRPGALNALDDQQKSQLLLYHVLPKFYTLIELQ 121

Query: 123 TVSNPVRTLAGDWGLNFTGQA--NQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEA 182
           TVSNPVRT AGDWGLNFTGQA  NQVNVSTG++   +NNKLREQSPLSI+ V+QVLLP+A
Sbjct: 122 TVSNPVRTQAGDWGLNFTGQANSNQVNVSTGIITAPINNKLREQSPLSIFVVDQVLLPDA 181

Query: 183 LFGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFGLI 242
           LFG+H AA PPKA  P ++K+P DGETPPKSDAA  PA+ K A  +NGVGLGL+L FGLI
Sbjct: 182 LFGNHTAA-PPKAPAPGTDKAPVDGETPPKSDAAKPPANDKSAVTKNGVGLGLILSFGLI 241

Query: 243 AFSVLS 246
             SV+S
Sbjct: 242 VISVVS 245

[Close]

BLAST of Carg18041 vs. TAIR 10
Match: AT5G44130.1 (FASCICLIN-like arabinogalactan protein 13 precursor )

HSP 1 Score: 211.1 bits (536), Expect = 1.0e-54
Identity = 128/246 (52.03%), Postives = 164/246 (66.67%), Query Frame = 0


Query: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60
           MA+T LLLLLL    +F  T +    AAPAP   GP+NIT ILEKGGQF T IRLLN T+
Sbjct: 1   MATTPLLLLLLT--AVFLSTEITAQRAAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQ 60

Query: 61  INIQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDL 120
           I  Q++ Q+N++ +GMT+LAPTDNAF +LKPG LN L+  ++ +L+LYHV  KFYTL DL
Sbjct: 61  IGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDL 120

Query: 121 QTVSNPVRTLA------GDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQV 180
            +VSNPVRT A      G +GLNFTGQ NQVNVSTGVV   ++  LR++ PL++Y V+ V
Sbjct: 121 LSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMV 180

Query: 181 LLPEALFGDH---PAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRN---GV 235
           LLPE +FG+    P APPPK+  P      +D     K  AA S ++   +   N   G+
Sbjct: 181 LLPEEMFGERKISPMAPPPKSKSP----DVSDDSESSKKAAAPSESEKSGSGEMNTGLGL 240

[Close]

BLAST of Carg18041 vs. TAIR 10
Match: AT1G03870.1 (FASCICLIN-like arabinoogalactan 9 )

HSP 1 Score: 202.2 bits (513), Expect = 4.8e-52
Identity = 124/254 (48.82%), Postives = 166/254 (65.35%), Query Frame = 0


Query: 1   MASTALLL--LLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNE 60
           MA+T L L  LLL+  +L +    AQ PAAPAP   GP+N+T ILEKGGQFTTFI LLN 
Sbjct: 1   MATTRLTLAPLLLIAAVLLATKATAQ-PAAPAPEPAGPINLTAILEKGGQFTTFIHLLNI 60

Query: 61  TKINIQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLT 120
           T++  Q++ Q+N++ +GMT+ APTDNAF +LKPG LN L+  ++ +L+LYHV  K+Y++ 
Sbjct: 61  TQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMD 120

Query: 121 DLQTVSNPVRTLA-----GDWGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQ 180
           DL +VSNPVRT A     G +GLNFTGQ NQ+NVSTG V   ++N LR+Q PL++Y V+ 
Sbjct: 121 DLLSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDM 180

Query: 181 VLLPEALFGDH---PAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGL 240
           VLLP  +FG+H   P AP PK+      KS    +    +  A SP+D K  +    VGL
Sbjct: 181 VLLPGEMFGEHKLSPIAPAPKS------KSGGVTDDSGSTKKAASPSD-KSGSGEKKVGL 240

Query: 241 GLVLGFGLIAFSVL 245
           G  LG  ++    L
Sbjct: 241 GFGLGLIVLCLKFL 246

[Close]

BLAST of Carg18041 vs. TAIR 10
Match: AT2G20520.1 (FASCICLIN-like arabinogalactan 6 )

HSP 1 Score: 199.1 bits (505), Expect = 4.0e-51
Identity = 122/251 (48.61%), Postives = 160/251 (63.75%), Query Frame = 0


Query: 3   STALLLLLLLPFLLFSVTTLAQTPAAPAPSS-PGPLNITGILEKGGQFTTFIRLLNETKI 62
           S++L   ++L   LF++  +   P APAP++   P+N+T ILE G QFTT I+LLN T++
Sbjct: 2   SSSLFSYVVLLIFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQV 61

Query: 63  NIQLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQ 122
             Q+  QLN++ QGMTI APTDNAFN LKPG LN L  Q++ QL+LYH++ K+Y+L+DL 
Sbjct: 62  GFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDLL 121

Query: 123 TVSNPVRTLA-----GDWGLNFTGQA--NQVNVSTGVVMVAVNNKLREQSPLSIYAVEQV 182
             SNPVRT A     G +GLNFTGQA  NQVNVSTGVV   +NN LR+Q PL++Y V+ V
Sbjct: 122 LASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSV 181

Query: 183 LLPEALFGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPR-NGVGLGLV 242
           LLPE LFG      P  A  P S  S +D ++P   D      +HK A        LG+V
Sbjct: 182 LLPEELFG--TKTTPTGAPAPKSSTSSSDADSPAADD------EHKSAGSSVKRTSLGIV 241

Query: 243 LGFGLIAFSVL 245
           + F L   SV+
Sbjct: 242 VSFALFCCSVI 244

[Close]

BLAST of Carg18041 vs. TAIR 10
Match: AT5G03170.1 (FASCICLIN-like arabinogalactan-protein 11 )

HSP 1 Score: 173.3 bits (438), Expect = 2.4e-43
Identity = 110/229 (48.03%), Postives = 136/229 (59.39%), Query Frame = 0


Query: 11  LLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKINIQLDNQLN 70
           L  F L   TT  Q   APAP   GP NIT ILEK GQFT FIRLL  T+ + Q++ QLN
Sbjct: 12  LFIFFLVIATTYGQ---APAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLN 71

Query: 71  -NTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQTVSNPVRT 130
            ++  G+T+ APTDNAFNSLK G LN L+DQ+K QL+ +HVL    T+   QTVSNP+RT
Sbjct: 72  SSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRT 131

Query: 131 LAGD-----WGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPEALFGDH 190
            AGD     + LN T   NQVN++TGVV   V N +     L++Y V+QVLLP A+FG  
Sbjct: 132 QAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGSS 191

Query: 191 PA-APPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGL 233
            A AP P+  G  S+ S + G      D      D  D A R G G G+
Sbjct: 192 VAPAPAPEKGGSVSKGSASGG------DDGGDSTDSSD-AERTGFGFGI 230

[Close]

BLAST of Carg18041 vs. TAIR 10
Match: AT5G60490.1 (FASCICLIN-like arabinogalactan-protein 12 )

HSP 1 Score: 156.8 bits (395), Expect = 2.3e-38
Identity = 94/220 (42.73%), Postives = 133/220 (60.45%), Query Frame = 0


Query: 7   LLLLLLPFLLFSVTT---LAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETKINI 66
           L++LL   LL   TT   L+Q   A AP+ PGP N+T ILEK GQFT FIRLL  T +  
Sbjct: 5   LIILLFTVLLLLTTTPGILSQPSPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVAN 64

Query: 67  QLDNQLNNTPQGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTDLQTV 126
           QL  QLNN+  G+TI AP+D++F  LK G LN L D+++ +L+ +HV+  + + ++ QT+
Sbjct: 65  QLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTI 124

Query: 127 SNPVRTLAGD-----WGLNFTGQANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLPE 186
           SNP+RT AGD     + LN T   N VN+++GV    V+  +     L++Y V++VLLP+
Sbjct: 125 SNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQ 184

Query: 187 ALFGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPAD 219
            +F   P AP P  S   S+K   D +    S +  SPAD
Sbjct: 185 QVFDPRPPAPAPAPSVSKSKKKKDDSD----SSSDDSPAD 220

The following BLAST results are available for this feature:

BLAST of Carg18041 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022841.1	1.1e-127	100.00	Fasciclin-like arabinogalactan protein 6 [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022930821.1	4.2e-127	99.59	fasciclin-like arabinogalactan protein 13 [Cucurbita moschata] >KAG6589141.1 Fas...	[more]
XP_023530327.1	9.7e-124	98.36	fasciclin-like arabinogalactan protein 13 [Cucurbita pepo subsp. pepo]	[more]
XP_022988922.1	4.8e-123	97.55	fasciclin-like arabinogalactan protein 13 [Cucurbita maxima]	[more]
XP_008455488.1	2.6e-92	75.00	PREDICTED: fasciclin-like arabinogalactan protein 6 [Cucumis melo]	[more]

BLAST of Carg18041 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFH6	1.4e-53	52.03	Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9ZWA8	6.7e-51	48.82	Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9...	[more]
Q9SIL7	5.7e-50	48.61	Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6...	[more]
Q8LEJ6	3.3e-42	48.03	Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q8LEE9	3.2e-37	42.73	Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]

BLAST of Carg18041 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ES00	2.0e-127	99.59	fasciclin-like arabinogalactan protein 13 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1JED4	2.3e-123	97.55	fasciclin-like arabinogalactan protein 13 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A1S3C1R5	1.3e-92	75.00	fasciclin-like arabinogalactan protein 6 OS=Cucumis melo OX=3656 GN=LOC103495639...	[more]
A0A6J1C293	4.5e-90	74.90	fasciclin-like arabinogalactan protein 13 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A0A0K1Z9	7.9e-87	71.95	FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G039260 PE=3 S...	[more]

BLAST of Carg18041 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G44130.1	1.0e-54	52.03	FASCICLIN-like arabinogalactan protein 13 precursor	[more]
AT1G03870.1	4.8e-52	48.82	FASCICLIN-like arabinoogalactan 9	[more]
AT2G20520.1	4.0e-51	48.61	FASCICLIN-like arabinogalactan 6	[more]
AT5G03170.1	2.4e-43	48.03	FASCICLIN-like arabinogalactan-protein 11	[more]
AT5G60490.1	2.3e-38	42.73	FASCICLIN-like arabinogalactan-protein 12	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 77..178 e-value: 8.1E-19 score: 78.5
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 48..177 e-value: 8.9E-20 score: 71.2
IPR000782	FAS1 domain	PROSITE	PS50213	FAS1	coord: 36..175 score: 18.645536
IPR036378	FAS1 domain superfamily	GENE3D	2.30.180.10	FAS1 domain	coord: 19..178 e-value: 4.3E-20 score: 74.5
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 31..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..223
None	No IPR available	PANTHER	PTHR32077:SF54	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6	coord: 6..243
IPR045003	Fasciclin-like arabinogalactan protein, group A	PANTHER	PTHR32077	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	coord: 6..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18041-RA	Carg18041-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009834	plant-type secondary cell wall biogenesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane