Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGAGAACGAGAAATACAGAGAGAGAATGAAGGACTTGGAATGGAGCGAAGCAAGGAAGAGGATGATCGAAGATCAGGCAAAGGCGGAACTGGAATCTCTCCAACTTCTTCATCCCAATCGCTTCGAATACCTAAAGCTCGAACTCAAATCCTTCATCCAACTTCTTCAATCGCAATCGCAATCGCGATCGGAAGAGCTTTTTCATCAGCCGAACACTGTCGAAGCCTCGAGACGACGATCGCCTTCCACTCTCGCTCCTGATTCGCAAGGTCAGTGCCCGCTCTGCTGTCCTTTCCATCTCTTCTTCTTCTTCTTCTTCTTCTTTTCCGATTGTTTACTGATTCATGTGTTTTGTAGCAGAGTCGAGTAGCTGTAGGAAGAGGAGGAAGATGGAGGAAGGAGGACAAATGAAAGTGTACGGGAACGGATTACGGAGAGAGATCGCTGAATCGGAAACGGGAGACAAGAACGGGCGGCGGAGGGATAGAGTTGATGTGGTTCTGGAAAGAGCCGTTGTTTGTCTCCGGAAGATTCAACGCTTCAAAACGGCTCTGATTTCCACCGCCGATTGA
mRNA sequence
AGAGAGAACGAGAAATACAGAGAGAGAATGAAGGACTTGGAATGGAGCGAAGCAAGGAAGAGGATGATCGAAGATCAGGCAAAGGCGGAACTGGAATCTCTCCAACTTCTTCATCCCAATCGCTTCGAATACCTAAAGCTCGAACTCAAATCCTTCATCCAACTTCTTCAATCGCAATCGCAATCGCGATCGGAAGAGCTTTTTCATCAGCCGAACACTGTCGAAGCCTCGAGACGACGATCGCCTTCCACTCTCGCTCCTGATTCGCAAGAGTCGAGTAGCTGTAGGAAGAGGAGGAAGATGGAGGAAGGAGGACAAATGAAAGTGTACGGGAACGGATTACGGAGAGAGATCGCTGAATCGGAAACGGGAGACAAGAACGGGCGGCGGAGGGATAGAGTTGATGTGGTTCTGGAAAGAGCCGTTGTTTGTCTCCGGAAGATTCAACGCTTCAAAACGGCTCTGATTTCCACCGCCGATTGA
Coding sequence (CDS)
AGAGAGAACGAGAAATACAGAGAGAGAATGAAGGACTTGGAATGGAGCGAAGCAAGGAAGAGGATGATCGAAGATCAGGCAAAGGCGGAACTGGAATCTCTCCAACTTCTTCATCCCAATCGCTTCGAATACCTAAAGCTCGAACTCAAATCCTTCATCCAACTTCTTCAATCGCAATCGCAATCGCGATCGGAAGAGCTTTTTCATCAGCCGAACACTGTCGAAGCCTCGAGACGACGATCGCCTTCCACTCTCGCTCCTGATTCGCAAGAGTCGAGTAGCTGTAGGAAGAGGAGGAAGATGGAGGAAGGAGGACAAATGAAAGTGTACGGGAACGGATTACGGAGAGAGATCGCTGAATCGGAAACGGGAGACAAGAACGGGCGGCGGAGGGATAGAGTTGATGTGGTTCTGGAAAGAGCCGTTGTTTGTCTCCGGAAGATTCAACGCTTCAAAACGGCTCTGATTTCCACCGCCGATTGA
Protein sequence
RENEKYRERMKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFHQPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGRRRDRVDVVLERAVVCLRKIQRFKTALISTAD
Homology
BLAST of Carg18014 vs. NCBI nr
Match:
KAG7022043.1 (hypothetical protein SDJN02_15772, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 295.4 bits (755), Expect = 2.9e-76
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
Query: 1 RENEKYRERMKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQS 60
RENEKYRERMKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQS
Sbjct: 1 RENEKYRERMKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQS 60
Query: 61 QSRSEELFHQPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAE 120
QSRSEELFHQPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAE
Sbjct: 61 QSRSEELFHQPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAE 120
Query: 121 SETGDKNGRRRDRVDVVLERAVVCLRKIQRFKTALISTAD 161
SETGDKNGRRRDRVDVVLERAVVCLRKIQRFKTALISTAD
Sbjct: 121 SETGDKNGRRRDRVDVVLERAVVCLRKIQRFKTALISTAD 160
BLAST of Carg18014 vs. NCBI nr
Match:
XP_022933880.1 (uncharacterized protein LOC111441161 isoform X2 [Cucurbita moschata] >KAG6588149.1 hypothetical protein SDJN03_16714, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 280.4 bits (716), Expect = 9.6e-72
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
Query: 10 MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 69
MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH
Sbjct: 1 MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 60
Query: 70 QPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGR 129
QPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGR
Sbjct: 61 QPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGR 120
Query: 130 RRDRVDVVLERAVVCLRKIQRFKTALISTAD 161
RRDRVDVVLERAVVCLRKIQRFKTALISTAD
Sbjct: 121 RRDRVDVVLERAVVCLRKIQRFKTALISTAD 151
BLAST of Carg18014 vs. NCBI nr
Match:
XP_022933879.1 (uncharacterized protein LOC111441161 isoform X1 [Cucurbita moschata])
HSP 1 Score: 275.8 bits (704), Expect = 2.4e-70
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0
Query: 10 MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 69
MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH
Sbjct: 1 MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 60
Query: 70 QPNTVEASRRRSPSTLAPDSQ-ESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNG 129
QPNTVEASRRRSPSTLAPDSQ ESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNG
Sbjct: 61 QPNTVEASRRRSPSTLAPDSQAESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNG 120
Query: 130 RRRDRVDVVLERAVVCLRKIQRFKTALISTAD 161
RRRDRVDVVLERAVVCLRKIQRFKTALISTAD
Sbjct: 121 RRRDRVDVVLERAVVCLRKIQRFKTALISTAD 152
BLAST of Carg18014 vs. NCBI nr
Match:
XP_023531053.1 (uncharacterized protein LOC111793421 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 272.7 bits (696), Expect = 2.0e-69
Identity = 147/151 (97.35%), Postives = 149/151 (98.68%), Query Frame = 0
Query: 10 MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 69
M DLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQS+SEELFH
Sbjct: 1 MTDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSQSEELFH 60
Query: 70 QPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGR 129
QPNTVEASRRRSPS+LAPDSQESSSCRKRRK EEGGQMKVYGNGLRREIAESETGDKNGR
Sbjct: 61 QPNTVEASRRRSPSSLAPDSQESSSCRKRRKTEEGGQMKVYGNGLRREIAESETGDKNGR 120
Query: 130 RRDRVDVVLERAVVCLRKIQRFKTALISTAD 161
RRDRVDVVLERAVVCLRKIQRFKTALISTAD
Sbjct: 121 RRDRVDVVLERAVVCLRKIQRFKTALISTAD 151
BLAST of Carg18014 vs. NCBI nr
Match:
XP_022968454.1 (uncharacterized protein LOC111467682 isoform X2 [Cucurbita maxima])
HSP 1 Score: 257.3 bits (656), Expect = 8.7e-65
Identity = 142/150 (94.67%), Postives = 145/150 (96.67%), Query Frame = 0
Query: 10 MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 69
M DLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQ SEELFH
Sbjct: 1 MTDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQ--SEELFH 60
Query: 70 QPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGR 129
QPN VEASRRRSPS+LAPDSQESSSCRKRRKMEEGGQMKVYG+ L+REIAESETGDKNGR
Sbjct: 61 QPNAVEASRRRSPSSLAPDSQESSSCRKRRKMEEGGQMKVYGDRLQREIAESETGDKNGR 120
Query: 130 RRDRVDVVLERAVVCLRKIQRFKTALISTA 160
RRDRVDVVLERAVVCLRKIQRFKTALISTA
Sbjct: 121 RRDRVDVVLERAVVCLRKIQRFKTALISTA 148
BLAST of Carg18014 vs. ExPASy TrEMBL
Match:
A0A6J1F625 (uncharacterized protein LOC111441161 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441161 PE=4 SV=1)
HSP 1 Score: 280.4 bits (716), Expect = 4.7e-72
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
Query: 10 MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 69
MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH
Sbjct: 1 MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 60
Query: 70 QPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGR 129
QPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGR
Sbjct: 61 QPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGR 120
Query: 130 RRDRVDVVLERAVVCLRKIQRFKTALISTAD 161
RRDRVDVVLERAVVCLRKIQRFKTALISTAD
Sbjct: 121 RRDRVDVVLERAVVCLRKIQRFKTALISTAD 151
BLAST of Carg18014 vs. ExPASy TrEMBL
Match:
A0A6J1F0Z4 (uncharacterized protein LOC111441161 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441161 PE=4 SV=1)
HSP 1 Score: 275.8 bits (704), Expect = 1.1e-70
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0
Query: 10 MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 69
MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH
Sbjct: 1 MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 60
Query: 70 QPNTVEASRRRSPSTLAPDSQ-ESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNG 129
QPNTVEASRRRSPSTLAPDSQ ESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNG
Sbjct: 61 QPNTVEASRRRSPSTLAPDSQAESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNG 120
Query: 130 RRRDRVDVVLERAVVCLRKIQRFKTALISTAD 161
RRRDRVDVVLERAVVCLRKIQRFKTALISTAD
Sbjct: 121 RRRDRVDVVLERAVVCLRKIQRFKTALISTAD 152
BLAST of Carg18014 vs. ExPASy TrEMBL
Match:
A0A6J1HZP5 (uncharacterized protein LOC111467682 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467682 PE=4 SV=1)
HSP 1 Score: 257.3 bits (656), Expect = 4.2e-65
Identity = 142/150 (94.67%), Postives = 145/150 (96.67%), Query Frame = 0
Query: 10 MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 69
M DLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQ SEELFH
Sbjct: 1 MTDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQ--SEELFH 60
Query: 70 QPNTVEASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNGR 129
QPN VEASRRRSPS+LAPDSQESSSCRKRRKMEEGGQMKVYG+ L+REIAESETGDKNGR
Sbjct: 61 QPNAVEASRRRSPSSLAPDSQESSSCRKRRKMEEGGQMKVYGDRLQREIAESETGDKNGR 120
Query: 130 RRDRVDVVLERAVVCLRKIQRFKTALISTA 160
RRDRVDVVLERAVVCLRKIQRFKTALISTA
Sbjct: 121 RRDRVDVVLERAVVCLRKIQRFKTALISTA 148
BLAST of Carg18014 vs. ExPASy TrEMBL
Match:
A0A6J1HY07 (uncharacterized protein LOC111467682 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467682 PE=4 SV=1)
HSP 1 Score: 252.7 bits (644), Expect = 1.0e-63
Identity = 142/151 (94.04%), Postives = 145/151 (96.03%), Query Frame = 0
Query: 10 MKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFH 69
M DLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQ SEELFH
Sbjct: 1 MTDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQ--SEELFH 60
Query: 70 QPNTVEASRRRSPSTLAPDSQ-ESSSCRKRRKMEEGGQMKVYGNGLRREIAESETGDKNG 129
QPN VEASRRRSPS+LAPDSQ ESSSCRKRRKMEEGGQMKVYG+ L+REIAESETGDKNG
Sbjct: 61 QPNAVEASRRRSPSSLAPDSQAESSSCRKRRKMEEGGQMKVYGDRLQREIAESETGDKNG 120
Query: 130 RRRDRVDVVLERAVVCLRKIQRFKTALISTA 160
RRRDRVDVVLERAVVCLRKIQRFKTALISTA
Sbjct: 121 RRRDRVDVVLERAVVCLRKIQRFKTALISTA 149
BLAST of Carg18014 vs. ExPASy TrEMBL
Match:
A0A5D3DU40 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5245G00010 PE=4 SV=1)
HSP 1 Score: 167.5 bits (423), Expect = 4.4e-38
Identity = 104/157 (66.24%), Postives = 121/157 (77.07%), Query Frame = 0
Query: 3 NEKYRERMKDLEWSEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQS 62
NE Y ER+ LEWS+ARK MIE+QA EL+SLQLL+PNRFEYLKLELKSFI LLQSQ
Sbjct: 11 NETYTERISSLEWSKARKTMIEEQANVELQSLQLLYPNRFEYLKLELKSFIHLLQSQ--- 70
Query: 63 RSEELFHQPNTVEASRRR-SPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAES 122
SE F QPNT+ S R SP + PD+QESSSCRKRRK+EEG + NGL+RE+AES
Sbjct: 71 -SEHPFPQPNTILTSNRSPSPFSFGPDTQESSSCRKRRKVEEGRNSR--RNGLQREVAES 130
Query: 123 ETGDKNGRRRDRVDVVLERAVVCLRKIQRFKTALIST 159
E+ K GRR+DRV+VVLERA VCL KI+RFK AL S+
Sbjct: 131 ES--KIGRRKDRVEVVLERAAVCLCKIRRFKMALFSS 159
BLAST of Carg18014 vs. TAIR 10
Match:
AT5G36960.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 54.7 bits (130), Expect = 8.0e-08
Identity = 52/151 (34.44%), Postives = 80/151 (52.98%), Query Frame = 0
Query: 16 SEARKRMIEDQAKAELESLQLLHPNRFEYLKLELKSFIQLLQSQSQSRSEELFHQPNTVE 75
S + + + + AK ELE LQ +PNRF YLK +L+SFI L+
Sbjct: 4 SSSWEMQLVETAKEELEILQSQYPNRFAYLKSDLQSFISHLRED---------------H 63
Query: 76 ASRRRSPSTLAPDSQESSSCRKRRKMEEGGQMKVYGNGLRREIAESETG------DKNGR 135
A R SPS+ +QESS+C ++K + + K + L + + S TG +K G+
Sbjct: 64 APPRLSPSSSVVLTQESSNCNYKQKHK---KRKCVMDNLGDQASSSTTGKIHKNNNKMGQ 123
Query: 136 R-----RDRVDVVLERAVVCLRKIQRFKTAL 156
R ++RV++VLERA +CL+KI+ K +L
Sbjct: 124 RVVTKKKNRVEMVLERAQLCLQKIRDVKASL 136
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7022043.1 | 2.9e-76 | 100.00 | hypothetical protein SDJN02_15772, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022933880.1 | 9.6e-72 | 100.00 | uncharacterized protein LOC111441161 isoform X2 [Cucurbita moschata] >KAG6588149... | [more] |
XP_022933879.1 | 2.4e-70 | 99.34 | uncharacterized protein LOC111441161 isoform X1 [Cucurbita moschata] | [more] |
XP_023531053.1 | 2.0e-69 | 97.35 | uncharacterized protein LOC111793421 [Cucurbita pepo subsp. pepo] | [more] |
XP_022968454.1 | 8.7e-65 | 94.67 | uncharacterized protein LOC111467682 isoform X2 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1F625 | 4.7e-72 | 100.00 | uncharacterized protein LOC111441161 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1F0Z4 | 1.1e-70 | 99.34 | uncharacterized protein LOC111441161 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1HZP5 | 4.2e-65 | 94.67 | uncharacterized protein LOC111467682 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1HY07 | 1.0e-63 | 94.04 | uncharacterized protein LOC111467682 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A5D3DU40 | 4.4e-38 | 66.24 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
AT5G36960.1 | 8.0e-08 | 34.44 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... | [more] |